AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene053143


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene053143.t1 MTR_4g008250 99.895 951 1 0 1 951 1 951 0.0 1953
MS.gene053143.t1 MTR_7g112920 66.667 291 76 6 43 330 1 273 2.15e-114 352
MS.gene053143.t1 MTR_3g071150 82.258 186 18 2 1 186 1 171 9.70e-93 294
MS.gene053143.t1 MTR_4g132140 72.034 118 22 1 94 211 1 107 4.16e-50 172
MS.gene053143.t1 MTR_7g112940 68.367 98 25 2 856 951 52 145 1.40e-33 126
MS.gene053143.t1 MTR_5g019590 70.312 64 19 0 610 673 73 136 1.60e-22 95.1
MS.gene053143.t1 MTR_4g132130 64.384 73 24 2 314 385 1 72 2.06e-22 92.4
MS.gene053143.t1 MTR_6g051970 63.077 65 18 1 137 201 1 59 4.04e-21 88.2
MS.gene053143.t1 MTR_6g089270 56.250 80 29 1 128 207 1 74 1.80e-19 84.0
MS.gene053143.t1 MTR_4g076210 21.674 466 312 12 21 461 19 456 8.52e-15 79.7
MS.gene053143.t1 MTR_6g044465 51.250 80 34 1 594 673 1 75 1.39e-14 70.5
MS.gene053143.t1 MTR_3g008780 65.385 52 18 0 622 673 88 139 5.11e-14 71.2
MS.gene053143.t1 MTR_4g008310 100.000 35 0 0 884 918 41 75 5.86e-14 74.7
MS.gene053143.t1 MTR_7g056277 67.857 56 18 0 618 673 198 253 6.79e-14 76.3
MS.gene053143.t1 MTR_6g046370 63.462 52 19 0 622 673 8 59 2.39e-13 66.6
MS.gene053143.t1 MTR_8g470140 63.462 52 19 0 622 673 8 59 2.90e-13 65.9
MS.gene053143.t1 MTR_2g074950 63.462 52 19 0 622 673 25 76 4.76e-13 65.9
MS.gene053143.t1 MTR_0576s0010 61.538 52 20 0 622 673 13 64 8.32e-13 64.7
MS.gene053143.t1 MTR_3g024060 63.462 52 19 0 622 673 131 182 4.63e-12 66.2
MS.gene053143.t1 MTR_4g069920 22.816 412 267 13 36 422 48 433 1.35e-11 69.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene053143.t1 AT4G31480 81.158 950 177 2 1 950 1 948 0.0 1618
MS.gene053143.t1 AT4G31480 81.158 950 177 2 1 950 1 948 0.0 1618
MS.gene053143.t1 AT4G31480 81.158 950 177 2 1 950 1 948 0.0 1618
MS.gene053143.t1 AT4G31480 81.158 950 177 2 1 950 1 948 0.0 1618
MS.gene053143.t1 AT4G31480 81.158 950 177 2 1 950 1 948 0.0 1618
MS.gene053143.t1 AT4G31480 81.158 950 177 2 1 950 1 948 0.0 1618
MS.gene053143.t1 AT4G31480 81.158 950 177 2 1 950 1 948 0.0 1618
MS.gene053143.t1 AT4G31480 81.158 950 177 2 1 950 24 971 0.0 1617
MS.gene053143.t1 AT4G31480 81.158 950 177 2 1 950 24 971 0.0 1617
MS.gene053143.t1 AT4G31490 80.907 948 179 2 1 948 1 946 0.0 1608
MS.gene053143.t1 AT4G31490 80.907 948 179 2 1 948 1 946 0.0 1608
MS.gene053143.t1 AT4G31490 80.907 948 179 2 1 948 1 946 0.0 1608
MS.gene053143.t1 AT4G23460 21.245 466 314 12 21 461 19 456 2.87e-14 77.8
MS.gene053143.t1 AT4G11380 21.459 466 313 12 21 461 19 456 3.03e-13 74.7
MS.gene053143.t1 AT4G11380 21.369 482 321 13 5 461 30 478 1.50e-12 72.4

Find 216 sgRNAs with CRISPR-Local

Find 363 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGATCTGTTTGCTTGATTC+TGG 0.132054 4.2:+91573494 None:intergenic
TCTTGTGCTCTGTGGATTAT+TGG 0.193178 4.2:-91574783 MS.gene053143:CDS
GAAAGTTTGTAGGAATAATA+AGG 0.193674 4.2:-91575444 MS.gene053143:CDS
TACTTGTGCTATTAAGTTTC+CGG 0.200425 4.2:-91574985 MS.gene053143:CDS
TTGAGATCTCTGATTCTTTC+GGG 0.206526 4.2:-91574495 MS.gene053143:CDS
TTCTATCATCACTAGGCTTT+TGG 0.218921 4.2:-91574841 MS.gene053143:CDS
CTTTCGGGTGATTTCTTCCT+TGG 0.227308 4.2:-91574480 MS.gene053143:CDS
TGACAGATTAGGATCATTTC+AGG 0.238060 4.2:+91575860 None:intergenic
ACGAGCTTAAGAGGGATAAT+AGG 0.244193 4.2:-91575223 MS.gene053143:CDS
ATCCTCAGAGATGGTGTAAA+AGG 0.264720 4.2:+91574689 None:intergenic
ACCTGCTGCACAGCCTTTGA+TGG 0.265756 4.2:+91574651 None:intergenic
ATGTTTGGAGTTAGCAACTA+TGG 0.269674 4.2:-91573561 MS.gene053143:CDS
CTTGAGATCTCTGATTCTTT+CGG 0.271553 4.2:-91574496 MS.gene053143:CDS
GAGGGATAATAGGGAGATTA+TGG 0.272228 4.2:-91575213 MS.gene053143:CDS
GCATTTGTTGATGGATTTCT+TGG 0.285633 4.2:-91574943 MS.gene053143:CDS
CAGGGATCTCTGTCTTCTAT+TGG 0.298380 4.2:-91574522 MS.gene053143:CDS
AAGGTTTCTTCCACTGAAAC+TGG 0.299306 4.2:-91573461 MS.gene053143:CDS
TTCGAGAGATTCTTTGATTT+CGG 0.304898 4.2:+91576075 None:intergenic
TTTCGGGTGATTTCTTCCTT+GGG 0.305867 4.2:-91574479 MS.gene053143:CDS
TGGATACTTTCTATCAGATT+CGG 0.310141 4.2:-91574821 MS.gene053143:CDS
GCAAGATGAGAGGGAGTTCC+TGG 0.315233 4.2:-91571583 MS.gene053143:CDS
ACAGTTACAAATGGTGGTTT+TGG 0.320506 4.2:-91575477 MS.gene053143:CDS
TAGGGAGATTATGGTTGATA+TGG 0.324072 4.2:-91575204 MS.gene053143:CDS
AGGGAATTGCTCTGAGTCTT+GGG 0.325449 4.2:-91571069 MS.gene053143:CDS
GATTATGGTTGATATGGTTA+TGG 0.347749 4.2:-91575198 MS.gene053143:CDS
ATATGGTTATGGATGTCCTT+AGG 0.354045 4.2:-91575187 MS.gene053143:CDS
GGATACTTTCTATCAGATTC+GGG 0.357062 4.2:-91574820 MS.gene053143:CDS
ACTCGACCACTGTGTCTTCT+AGG 0.357892 4.2:-91574626 MS.gene053143:CDS
AACTCTCCAGAATTTATGTT+TGG 0.360698 4.2:-91573576 MS.gene053143:CDS
TGCTATTAAGTTTCCGGAGG+TGG 0.364681 4.2:-91574979 MS.gene053143:CDS
GCAATCATGCTTCTCCTTAA+CGG 0.368170 4.2:-91576013 MS.gene053143:CDS
ACTGAAACTGGAGTTATATT+CGG 0.370062 4.2:-91573449 MS.gene053143:CDS
ATGATAGAAACACGCAGCTT+AGG 0.375297 4.2:+91574855 None:intergenic
TTCCTTCTAATATCATGATT+AGG 0.375355 4.2:+91575152 None:intergenic
TGTTGAGAAATTTCTTGTTT+CGG 0.377476 4.2:-91575612 MS.gene053143:CDS
TACTGTTGTGCATTTGTTGA+TGG 0.380765 4.2:-91574952 MS.gene053143:CDS
AAAGTTTGTAGGAATAATAA+GGG 0.384005 4.2:-91575443 MS.gene053143:CDS
TATTGATAGGATCATTGATT+GGG 0.384961 4.2:-91575504 MS.gene053143:CDS
CTAACTCCAAACATAAATTC+TGG 0.384969 4.2:+91573570 None:intergenic
CTCCTAATCATGATATTAGA+AGG 0.385310 4.2:-91575154 MS.gene053143:CDS
TGAGTATTGTTTGTCTCTTT+CGG 0.395014 4.2:-91574760 MS.gene053143:CDS
TTCACAGTCCTTGTTGATCA+TGG 0.398314 4.2:-91574373 MS.gene053143:CDS
ATCGGCTTAACGAGCTTAAG+AGG 0.398378 4.2:-91575232 MS.gene053143:CDS
CGAGCTTAAGAGGGATAATA+GGG 0.400973 4.2:-91575222 MS.gene053143:CDS
ATATTGATAGGATCATTGAT+TGG 0.404295 4.2:-91575505 MS.gene053143:CDS
ATTAGATTGCTGTGTAATAC+TGG 0.411143 4.2:-91574270 MS.gene053143:CDS
CAGGGAATTGCTCTGAGTCT+TGG 0.412830 4.2:-91571070 MS.gene053143:CDS
TCGCGGTCGGTGCAGAACTA+AGG 0.413611 4.2:+91575330 None:intergenic
TGCCTTTGCTTTAATCTCCT+CGG 0.413901 4.2:+91574167 None:intergenic
AATTGATTAAGAAAGTTTGT+AGG 0.415829 4.2:-91575454 MS.gene053143:CDS
GCGGGGAGCATGAGAAGAAT+GGG 0.418503 4.2:-91575040 MS.gene053143:CDS
TTGATTTCGGTTGCGAGTGC+TGG 0.420907 4.2:+91576088 None:intergenic
AATCGCATTCTTCAGCTCAC+TGG 0.421276 4.2:-91573689 MS.gene053143:CDS
CTCTGAGGATGGAGAGGGTC+AGG 0.422196 4.2:-91574676 MS.gene053143:CDS
AGGGATCTCTGTCTTCTATT+GGG 0.424819 4.2:-91574521 MS.gene053143:CDS
AGGAATAATAAGGGAGAGAA+AGG 0.425300 4.2:-91575434 MS.gene053143:CDS
AGAAATTTCTCAACAATCTC+AGG 0.429922 4.2:+91575620 None:intergenic
TCTATCAGATTCGGGCTGCT+AGG 0.430384 4.2:-91574812 MS.gene053143:CDS
CATTTGTTGATGGATTTCTT+GGG 0.431544 4.2:-91574942 MS.gene053143:CDS
GAGAACTTTACCGCGAGAAT+CGG 0.432166 4.2:+91575883 None:intergenic
TCTCTTGTTCAGCTCTGCAT+TGG 0.438702 4.2:-91571227 MS.gene053143:intron
GAGGAATGGTTTCGCCGTTA+AGG 0.439775 4.2:+91575999 None:intergenic
TCTGGAGAGTTTCCTTGGTC+CGG 0.441384 4.2:+91573588 None:intergenic
AGCGGGGAGCATGAGAAGAA+TGG 0.445155 4.2:-91575041 MS.gene053143:CDS
TGATAGAAACACGCAGCTTA+GGG 0.445334 4.2:+91574856 None:intergenic
TAAATTCTGGAGAGTTTCCT+TGG 0.445694 4.2:+91573583 None:intergenic
TCATGAGAATCATTATCAAT+TGG 0.450088 4.2:+91574309 None:intergenic
TATGGTTATGGATGTCCTTA+GGG 0.454595 4.2:-91575186 MS.gene053143:CDS
CTTTAATCTCCTCGGTCTCA+CGG 0.455907 4.2:+91574175 None:intergenic
CGGTGATTTCGAGGTAAAGA+AGG 0.456385 4.2:+91575912 None:intergenic
AAGGAACTCACGGTGGAGTC+AGG 0.457955 4.2:+91571529 None:intergenic
CAAGACTCAGAGCAATTCCC+TGG 0.458458 4.2:+91571071 None:intergenic
TGACATTCATATTGATATCA+TGG 0.459711 4.2:-91573369 MS.gene053143:CDS
GCCATCAAAGGCTGTGCAGC+AGG 0.460529 4.2:-91574652 MS.gene053143:CDS
GTCCCATCGGCAAGAATCGC+AGG 0.461816 4.2:+91574600 None:intergenic
GACAAAGCTTATCTTAAGGT+TGG 0.462489 4.2:-91574436 MS.gene053143:CDS
GTCATAGGTTGCTGTAAATA+CGG 0.462568 4.2:-91571610 MS.gene053143:intron
ATGAGAAGAATGGGGAGTAT+AGG 0.463060 4.2:-91575031 MS.gene053143:CDS
CGCGGTCGGTGCAGAACTAA+GGG 0.465199 4.2:+91575331 None:intergenic
TACACCGAAGAATATTGATC+AGG 0.471600 4.2:-91575102 MS.gene053143:CDS
CAGTCTCAAGAGCAGCACTC+TGG 0.477594 4.2:+91574568 None:intergenic
AGCAAGATGCTTCGAGTAAG+AGG 0.478958 4.2:-91575589 MS.gene053143:CDS
TTGATAATGATTCTCATGAC+AGG 0.479100 4.2:-91574305 MS.gene053143:CDS
CACTGACAAAGCTTATCTTA+AGG 0.479698 4.2:-91574440 MS.gene053143:CDS
CTATCAGATTCGGGCTGCTA+GGG 0.480565 4.2:-91574811 MS.gene053143:CDS
CTCAGCCCACATAGTTCTAA+AGG 0.487112 4.2:+91573313 None:intergenic
ATCGCATTCTTCAGCTCACT+GGG 0.488030 4.2:-91573688 MS.gene053143:CDS
AGAATCAAGCAAACAGATCA+AGG 0.488212 4.2:-91573492 MS.gene053143:CDS
CTCATCGTTCACTTCGACAA+AGG 0.489294 4.2:-91576115 MS.gene053143:CDS
GTCACCGCCTACCCTTGTGC+AGG 0.489447 4.2:-91574541 MS.gene053143:CDS
GTGATGAGATAAGGAAGATA+TGG 0.490653 4.2:-91574248 MS.gene053143:CDS
TTGTTCAGCTCTGCATTGGA+AGG 0.494510 4.2:-91571223 MS.gene053143:intron
AGGTTGTTAAGACGCAGAGC+GGG 0.495077 4.2:-91575058 MS.gene053143:CDS
CTTCACAAAGCTCTGCCTGC+AGG 0.495433 4.2:+91574218 None:intergenic
TAAAATCACTTTGAAGCAGA+AGG 0.501025 4.2:-91571044 MS.gene053143:CDS
GCTTATCTTAAGGTTGGAAG+AGG 0.501167 4.2:-91574430 MS.gene053143:CDS
TAAAAGTCGATGAGGTCATC+AGG 0.502253 4.2:+91574126 None:intergenic
GCAACTATTAAGCAGTGTCT+TGG 0.506903 4.2:-91574720 MS.gene053143:CDS
TCCTGCATCTTGTGCTGATG+TGG 0.507317 4.2:-91573336 MS.gene053143:CDS
GGTTGTTATGATGCTTAAGA+AGG 0.507964 4.2:-91575081 MS.gene053143:CDS
ACAACCTGATCAATATTCTT+CGG 0.518597 4.2:+91575098 None:intergenic
TGAAGCTTATTGTGCTTGAT+CGG 0.519817 4.2:-91575250 MS.gene053143:CDS
TCCTCAGAGATGGTGTAAAA+GGG 0.521024 4.2:+91574690 None:intergenic
AGTGGAAGAAACCTTGATGT+TGG 0.521670 4.2:+91573469 None:intergenic
TAGACTTGATAATGTGGCCC+AGG 0.522945 4.2:+91571565 None:intergenic
GCCACATCAGCACAAGATGC+AGG 0.523769 4.2:+91573335 None:intergenic
TTGATGTTACTGTCATCAAC+CGG 0.524042 4.2:-91573607 MS.gene053143:CDS
AGGCCTGCGATTCTTGCCGA+TGG 0.526847 4.2:-91574603 MS.gene053143:CDS
GACAGATTAGGATCATTTCA+GGG 0.527691 4.2:+91575861 None:intergenic
TGTTATGATGCTTAAGAAGG+AGG 0.528121 4.2:-91575078 MS.gene053143:CDS
TGTTTGGAGTTAGCAACTAT+GGG 0.530203 4.2:-91573560 MS.gene053143:CDS
AGTCTCAAGAGCAGCACTCT+GGG 0.531103 4.2:+91574569 None:intergenic
ACCCTCTCCATCCTCAGAGA+TGG 0.532455 4.2:+91574680 None:intergenic
TACAAATGTTGCGTCTGCTA+TGG 0.534308 4.2:-91574916 MS.gene053143:CDS
TCTCTTTCGGAGGTTGAGAG+TGG 0.534403 4.2:-91574747 MS.gene053143:CDS
CACAAGGGTAGGCGGTGACA+TGG 0.536144 4.2:+91574545 None:intergenic
TACGGTATTGCAAGATGAGA+GGG 0.541044 4.2:-91571592 MS.gene053143:CDS
GACGATCTTAAACGTGCCAC+TGG 0.541667 4.2:-91573749 MS.gene053143:CDS
GAGGTCATCAGGCTGTGCAT+TGG 0.542020 4.2:+91574137 None:intergenic
CATCGCAAGTGAGGACGTAA+CGG 0.542360 4.2:+91575957 None:intergenic
ATGTGGCCTTTAGAACTATG+TGG 0.543399 4.2:-91573319 MS.gene053143:CDS
TCTGTTTATAAGCTTCCTCA+AGG 0.549635 4.2:-91575665 MS.gene053143:CDS
ACATATGCTTCAGCATAGAC+AGG 0.550275 4.2:+91573656 None:intergenic
GGGTTTGTTCTTGTGCTCTG+TGG 0.551774 4.2:-91574791 MS.gene053143:CDS
ACAGATCAAGGCCAACATCA+AGG 0.551932 4.2:-91573480 MS.gene053143:CDS
TGAGCTCGAAGATGAGGTGC+AGG 0.552537 4.2:-91573771 MS.gene053143:CDS
TGAGATAAGGAAGATATGGC+TGG 0.554553 4.2:-91574244 MS.gene053143:CDS
TGTTTATAAGCTTCCTCAAG+GGG 0.557926 4.2:-91575663 MS.gene053143:CDS
ACACCGCGAATAAATTCGTT+CGG 0.559084 4.2:+91575812 None:intergenic
CTCAAAAGTTGAAGTTAACA+AGG 0.559317 4.2:-91574400 MS.gene053143:CDS
GTATAGGCAGATGTTGGTGC+AGG 0.560283 4.2:-91575015 MS.gene053143:CDS
GGCCTGCGATTCTTGCCGAT+GGG 0.560801 4.2:-91574602 MS.gene053143:CDS
ATGGTCTCAATGCTGCAGCT+TGG 0.561190 4.2:-91574354 MS.gene053143:CDS
AGATATGGCTGGAATCCTGC+AGG 0.561257 4.2:-91574233 MS.gene053143:CDS
TCACCGAACGAATTTATTCG+CGG 0.565447 4.2:-91575815 MS.gene053143:CDS
ACAGCGTTTCGTCTCACGAA+AGG 0.565951 4.2:+91575701 None:intergenic
CTGTTTATAAGCTTCCTCAA+GGG 0.566708 4.2:-91575664 MS.gene053143:CDS
ACAACAGTACTCGCCACCTC+CGG 0.567962 4.2:+91574966 None:intergenic
ATTGATAGGATCATTGATTG+GGG 0.572572 4.2:-91575503 MS.gene053143:CDS
TTATCACTTGAAGAGCAGAA+AGG 0.572845 4.2:-91574106 MS.gene053143:intron
TGAGTTTGAGTGGGAAAACA+AGG 0.573213 4.2:-91573294 MS.gene053143:intron
GGAATAATAAGGGAGAGAAA+GGG 0.575016 4.2:-91575433 MS.gene053143:CDS
TTCGGGTGATTTCTTCCTTG+GGG 0.575242 4.2:-91574478 MS.gene053143:CDS
GAATCATTATCAATTGGATG+TGG 0.584531 4.2:+91574315 None:intergenic
GTATTGTTTGTCTCTTTCGG+AGG 0.585959 4.2:-91574757 MS.gene053143:CDS
CACCATCTCTGAGGATGGAG+AGG 0.586391 4.2:-91574682 MS.gene053143:CDS
TATTTGTAGACTTGATAATG+TGG 0.587171 4.2:+91571559 None:intergenic
CAAGATGAGAGGGAGTTCCT+GGG 0.587875 4.2:-91571582 MS.gene053143:CDS
CGGTGTGATCATCGCAAGTG+AGG 0.588315 4.2:+91575948 None:intergenic
GTAATACTGGTGATGAGATA+AGG 0.591054 4.2:-91574257 MS.gene053143:CDS
CCTCATCTTCGAGCTCAAGT+TGG 0.591377 4.2:+91573777 None:intergenic
CAGAATAAGAAGTAAAACCC+AGG 0.591954 4.2:-91571089 MS.gene053143:CDS
TCAAGCAACTGCTCCCCTTG+AGG 0.592174 4.2:+91575650 None:intergenic
AGCAGCACTCTGGGTAGCAT+AGG 0.593369 4.2:+91574578 None:intergenic
TGATAGGATCATTGATTGGG+GGG 0.593801 4.2:-91575501 MS.gene053143:CDS
GATAAAATCGAAGGAATCAA+CGG 0.600291 4.2:+91575743 None:intergenic
AGTGAGGACGTAACGGATGA+CGG 0.601311 4.2:+91575964 None:intergenic
GCAGCCGCTTTAATCGCGGT+CGG 0.602852 4.2:+91575317 None:intergenic
GCTGTTGTTTATGAATGTGC+TGG 0.603920 4.2:-91575365 MS.gene053143:CDS
TGCACCGACCGCGATTAAAG+CGG 0.605018 4.2:-91575321 MS.gene053143:CDS
TGGGGAGTATAGGCAGATGT+TGG 0.605111 4.2:-91575021 MS.gene053143:CDS
AAGACAGAGATCCCTGCACA+AGG 0.605670 4.2:+91574529 None:intergenic
GACCGAGGAGATTAAAGCAA+AGG 0.607890 4.2:-91574169 MS.gene053143:CDS
TCCAGATTCGATAAAATCGA+AGG 0.607979 4.2:+91575734 None:intergenic
TGTGGCCTTTAGAACTATGT+GGG 0.608107 4.2:-91573318 MS.gene053143:CDS
TACACAGCAATCTAATGCAA+AGG 0.609288 4.2:+91574277 None:intergenic
AGACAGAGATCCCTGCACAA+GGG 0.610395 4.2:+91574530 None:intergenic
ATAACCGCTCAATTTACCAT+CGG 0.613015 4.2:+91571114 None:intergenic
TCACCGCCTACCCTTGTGCA+GGG 0.613107 4.2:-91574540 MS.gene053143:CDS
AGAGATCCCTGCACAAGGGT+AGG 0.614667 4.2:+91574534 None:intergenic
CCAACTTGAGCTCGAAGATG+AGG 0.614861 4.2:-91573777 MS.gene053143:CDS
AGAATAAGAAGTAAAACCCA+GGG 0.615034 4.2:-91571088 MS.gene053143:CDS
AAAATCACTTTGAAGCAGAA+GGG 0.616042 4.2:-91571043 MS.gene053143:CDS
TAGGAGTCGAAAGTGCCCTA+AGG 0.616121 4.2:+91575171 None:intergenic
TAAGCAGCGCCGTGAGACCG+AGG 0.616463 4.2:-91574184 MS.gene053143:CDS
AGAGGGTCAGGAGCCATCAA+AGG 0.618049 4.2:-91574664 MS.gene053143:CDS
TCTGCATTGGAAGGTGAGTG+TGG 0.618873 4.2:-91571214 MS.gene053143:CDS
GAATATAACTCCAGTTTCAG+TGG 0.619771 4.2:+91573451 None:intergenic
AAGACTCAGAGCAATTCCCT+GGG 0.620234 4.2:+91571072 None:intergenic
ATACGGTATTGCAAGATGAG+AGG 0.623355 4.2:-91571593 MS.gene053143:CDS
TCGGCTTAACGAGCTTAAGA+GGG 0.624554 4.2:-91575231 MS.gene053143:CDS
CTATGTGGGCTGAGTTTGAG+TGG 0.625334 4.2:-91573304 MS.gene053143:CDS
TGCGTGTTTCTATCATCACT+AGG 0.626366 4.2:-91574848 MS.gene053143:CDS
CTGGGTAGCATAGGTCCCAT+CGG 0.628553 4.2:+91574587 None:intergenic
TGTTGCGTCTGCTATGGATG+TGG 0.631879 4.2:-91574910 MS.gene053143:CDS
GGTTGTTAAGACGCAGAGCG+GGG 0.634964 4.2:-91575057 MS.gene053143:CDS
ATCCTTTGTAAACTCTCCAG+TGG 0.635004 4.2:+91573733 None:intergenic
GGGAATTGCTCTGAGTCTTG+GGG 0.635580 4.2:-91571068 MS.gene053143:CDS
ATTCGCAGCCGCTTTAATCG+CGG 0.638162 4.2:+91575313 None:intergenic
ATGACGGTGATGAAGAGTTG+AGG 0.642418 4.2:+91575980 None:intergenic
GGTTGATGACAGTAACATCA+AGG 0.643491 4.2:+91573609 None:intergenic
GAAATCAAAGAATCTCTCGA+AGG 0.643937 4.2:-91576073 MS.gene053143:CDS
ACCATCTCTGAGGATGGAGA+GGG 0.647823 4.2:-91574681 MS.gene053143:CDS
TTGTGCTATTAAGTTTCCGG+AGG 0.654288 4.2:-91574982 MS.gene053143:CDS
GGTGATGAAGAGTTGAGGAA+TGG 0.658642 4.2:+91575985 None:intergenic
AGCATTGAGAAGCAATCCGA+TGG 0.659389 4.2:-91571130 MS.gene053143:CDS
TACTGTCATCAACCGGACCA+AGG 0.661558 4.2:-91573600 MS.gene053143:CDS
CGGGGAGCATGAGAAGAATG+GGG 0.661763 4.2:-91575039 MS.gene053143:CDS
TGATTTCGAGGTAAAGAAGG+AGG 0.662780 4.2:+91575915 None:intergenic
CGACCACTGTGTCTTCTAGG+AGG 0.662950 4.2:-91574623 MS.gene053143:CDS
GATCCCTGCACAAGGGTAGG+CGG 0.664720 4.2:+91574537 None:intergenic
CATTGAGACCATGATCAACA+AGG 0.665953 4.2:+91574365 None:intergenic
GCGTCCACAAAACTACACTC+TGG 0.667477 4.2:-91573519 MS.gene053143:CDS
TGATAATGATTCTCATGACA+GGG 0.668331 4.2:-91574304 MS.gene053143:CDS
TACATGCGACAACTGCCCCA+AGG 0.668408 4.2:+91574463 None:intergenic
CAATCCGATGGTAAATTGAG+CGG 0.668476 4.2:-91571118 MS.gene053143:CDS
GAGGTTGTTAAGACGCAGAG+CGG 0.671714 4.2:-91575059 MS.gene053143:CDS
TCAAGTGATAAAAGTCGATG+AGG 0.671720 4.2:+91574118 None:intergenic
TATGTGGGCTGAGTTTGAGT+GGG 0.690862 4.2:-91573303 MS.gene053143:CDS
TTGATAGGATCATTGATTGG+GGG 0.691639 4.2:-91575502 MS.gene053143:CDS
ACCGATAAAACCGATTCTCG+CGG 0.697764 4.2:-91575893 MS.gene053143:CDS
CTTTGTCGAAGTGAACGATG+AGG 0.700062 4.2:+91576116 None:intergenic
GAGCTTTGTGAAGATGCTCG+CGG 0.718610 4.2:-91574208 MS.gene053143:CDS
TGCCACTGGAGAGTTTACAA+AGG 0.721810 4.2:-91573735 MS.gene053143:CDS
AGCACATTCATAAACAACAG+CGG 0.738106 4.2:+91575367 None:intergenic
AGGCCTCCTAGAAGACACAG+TGG 0.786866 4.2:+91574620 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTTTTAAAATGGAAAAAT+GGG + chr4.2:91573999-91574018 None:intergenic 10.0%
!! ATAAAAGTTGAAAAAGATTA+TGG - chr4.2:91573939-91573958 MS.gene053143:intron 15.0%
!! TAGGATAAATCATATATATA+GGG + chr4.2:91574518-91574537 None:intergenic 15.0%
!! TCCTAAATAAAACAAAAAAT+AGG - chr4.2:91575031-91575050 MS.gene053143:CDS 15.0%
!! TTAGGATAAATCATATATAT+AGG + chr4.2:91574519-91574538 None:intergenic 15.0%
!!! ATAATTTTATGTTGTTAATG+CGG + chr4.2:91574937-91574956 None:intergenic 15.0%
!!! ATTATTTTCTAAGACAAATT+TGG - chr4.2:91574952-91574971 MS.gene053143:CDS 15.0%
!!! ATTTTTAAAATGGAAAAATG+GGG + chr4.2:91573998-91574017 None:intergenic 15.0%
!!! CAATTTTTAAAATGGAAAAA+TGG + chr4.2:91574000-91574019 None:intergenic 15.0%
!!! TCCTATTTTTTGTTTTATTT+AGG + chr4.2:91575035-91575054 None:intergenic 15.0%
!!! TTATTTTCTAAGACAAATTT+GGG - chr4.2:91574953-91574972 MS.gene053143:CDS 15.0%
!!! TTTTCATGCAATTTTTAAAA+TGG + chr4.2:91574008-91574027 None:intergenic 15.0%
!! AAAATATAACAAATGAGAGA+AGG + chr4.2:91573909-91573928 None:intergenic 20.0%
!! AAAGTTTGTAGGAATAATAA+GGG - chr4.2:91571720-91571739 MS.gene053143:intron 20.0%
!! AATTGATTAAGAAAGTTTGT+AGG - chr4.2:91571709-91571728 MS.gene053143:intron 20.0%
!! TAAAAAGAAAAACAGAATTC+TGG + chr4.2:91575716-91575735 None:intergenic 20.0%
!!! ATCTTTTTACGAATATTGAT+AGG - chr4.2:91571646-91571665 MS.gene053143:intron 20.0%
!!! GAATTCTGTTTTTCTTTTTA+AGG - chr4.2:91575716-91575735 MS.gene053143:CDS 20.0%
!!! GTATTAATACTTTTTTTTCG+TGG - chr4.2:91574229-91574248 MS.gene053143:CDS 20.0%
!!! TAACATCAATTTTATGTCAT+AGG - chr4.2:91575538-91575557 MS.gene053143:CDS 20.0%
!!! TATTTTCTAAGACAAATTTG+GGG - chr4.2:91574954-91574973 MS.gene053143:CDS 20.0%
! ACCAAATTAAACAAATTGCA+TGG + chr4.2:91575858-91575877 None:intergenic 25.0%
! ACTATACCATTCTTAGAAAA+AGG + chr4.2:91573107-91573126 None:intergenic 25.0%
! ATAAGGTTTACGCAAATTAA+AGG + chr4.2:91575656-91575675 None:intergenic 25.0%
! ATATTGATAGGATCATTGAT+TGG - chr4.2:91571658-91571677 MS.gene053143:intron 25.0%
! CCAAATTAAACAAATTGCAT+GGG + chr4.2:91575857-91575876 None:intergenic 25.0%
! GAAAGTTTGTAGGAATAATA+AGG - chr4.2:91571719-91571738 MS.gene053143:intron 25.0%
! TACTTTAGATTCATGATTCA+TGG - chr4.2:91574040-91574059 MS.gene053143:intron 25.0%
! TATAAGCTGTAAGAATTTCT+AGG - chr4.2:91574397-91574416 MS.gene053143:CDS 25.0%
! TCATATTGAACTATTGAAGT+TGG - chr4.2:91574199-91574218 MS.gene053143:CDS 25.0%
! TCATGAGAATCATTATCAAT+TGG + chr4.2:91572857-91572876 None:intergenic 25.0%
! TGACATTCATATTGATATCA+TGG - chr4.2:91573794-91573813 MS.gene053143:intron 25.0%
! TGTAATAACTACATGAATGA+TGG - chr4.2:91575080-91575099 MS.gene053143:CDS 25.0%
! TTCCTTCTAATATCATGATT+AGG + chr4.2:91572014-91572033 None:intergenic 25.0%
!! AATATAACTTTAAGAGCACA+GGG + chr4.2:91574091-91574110 None:intergenic 25.0%
!! ATCATCTTACAATTTTACCA+AGG + chr4.2:91574319-91574338 None:intergenic 25.0%
!! TATTGATAGGATCATTGATT+GGG - chr4.2:91571659-91571678 MS.gene053143:intron 25.0%
!! TGTTGAGAAATTTCTTGTTT+CGG - chr4.2:91571551-91571570 MS.gene053143:CDS 25.0%
!!! CTCTAATTTTTTTTCCATGA+AGG - chr4.2:91575150-91575169 MS.gene053143:CDS 25.0%
!!! TATTTGTAGACTTGATAATG+TGG + chr4.2:91575607-91575626 None:intergenic 25.0%
AACTCTCCAGAATTTATGTT+TGG - chr4.2:91573587-91573606 MS.gene053143:CDS 30.0%
AAGAGACGATAACAATAATG+AGG - chr4.2:91574537-91574556 MS.gene053143:CDS 30.0%
AATGTATGTAGTTGTAGTAC+AGG - chr4.2:91575411-91575430 MS.gene053143:CDS 30.0%
ACAACCTGATCAATATTCTT+CGG + chr4.2:91572068-91572087 None:intergenic 30.0%
ACTGAAACTGGAGTTATATT+CGG - chr4.2:91573714-91573733 MS.gene053143:CDS 30.0%
ACTGTTTCAATGACTCAATT+TGG - chr4.2:91575199-91575218 MS.gene053143:CDS 30.0%
AGAAATTTCTCAACAATCTC+AGG + chr4.2:91571546-91571565 None:intergenic 30.0%
AGAATAAGAAGTAAAACCCA+GGG - chr4.2:91576075-91576094 MS.gene053143:CDS 30.0%
ATATAACAAATGAGAGAAGG+AGG + chr4.2:91573906-91573925 None:intergenic 30.0%
ATTAGATTGCTGTGTAATAC+TGG - chr4.2:91572893-91572912 MS.gene053143:intron 30.0%
CAGCTTATACATATACCATT+AGG + chr4.2:91574386-91574405 None:intergenic 30.0%
CATGCAAAACAAAAACTTCA+AGG + chr4.2:91573152-91573171 None:intergenic 30.0%
CATTATTGTTATCGTCTCTT+AGG + chr4.2:91574537-91574556 None:intergenic 30.0%
CTAACTCCAAACATAAATTC+TGG + chr4.2:91573596-91573615 None:intergenic 30.0%
CTCAAAAGTTGAAGTTAACA+AGG - chr4.2:91572763-91572782 MS.gene053143:intron 30.0%
CTCCTAATCATGATATTAGA+AGG - chr4.2:91572009-91572028 MS.gene053143:intron 30.0%
GAATCATTATCAATTGGATG+TGG + chr4.2:91572851-91572870 None:intergenic 30.0%
GAGTAAACAGATTATAGCTA+AGG + chr4.2:91575364-91575383 None:intergenic 30.0%
GATAAAATCGAAGGAATCAA+CGG + chr4.2:91571423-91571442 None:intergenic 30.0%
TCATGGTAATCTCTATTACT+GGG - chr4.2:91574057-91574076 MS.gene053143:intron 30.0%
TGGATACTTTCTATCAGATT+CGG - chr4.2:91572342-91572361 MS.gene053143:intron 30.0%
TTCATGGTAATCTCTATTAC+TGG - chr4.2:91574056-91574075 MS.gene053143:intron 30.0%
TTGCATGAAAAACAACTTCT+AGG - chr4.2:91574017-91574036 MS.gene053143:intron 30.0%
! AAGTTTAGTGTTTTGTCAGT+TGG - chr4.2:91573258-91573277 MS.gene053143:intron 30.0%
! AGCTGTGATTCATTCATTTT+TGG + chr4.2:91575292-91575311 None:intergenic 30.0%
! AGTTTAGTGTTTTGTCAGTT+GGG - chr4.2:91573259-91573278 MS.gene053143:intron 30.0%
! ATATAACTTTAAGAGCACAG+GGG + chr4.2:91574090-91574109 None:intergenic 30.0%
! ATCTTACAATTTTACCAAGG+TGG + chr4.2:91574316-91574335 None:intergenic 30.0%
! ATTGATAGGATCATTGATTG+GGG - chr4.2:91571660-91571679 MS.gene053143:intron 30.0%
! ATTTTTGTAGTTTCCTGCTT+AGG - chr4.2:91575337-91575356 MS.gene053143:CDS 30.0%
! CAATATAACTTTAAGAGCAC+AGG + chr4.2:91574092-91574111 None:intergenic 30.0%
! CCCATGCAATTTGTTTAATT+TGG - chr4.2:91575854-91575873 MS.gene053143:CDS 30.0%
! CTTCGATGATGGTATATTAA+TGG - chr4.2:91574151-91574170 MS.gene053143:CDS 30.0%
! CTTGTTAACTTCAACTTTTG+AGG + chr4.2:91572765-91572784 None:intergenic 30.0%
! GATGATGGTATATTAATGGT+TGG - chr4.2:91574155-91574174 MS.gene053143:CDS 30.0%
! GATTATGGTTGATATGGTTA+TGG - chr4.2:91571965-91571984 MS.gene053143:intron 30.0%
! TACTTGTGCTATTAAGTTTC+CGG - chr4.2:91572178-91572197 MS.gene053143:intron 30.0%
! TGAGTATTGTTTGTCTCTTT+CGG - chr4.2:91572403-91572422 MS.gene053143:intron 30.0%
! TGATAATGATTCTCATGACA+GGG - chr4.2:91572859-91572878 MS.gene053143:intron 30.0%
! TTCGAGAGATTCTTTGATTT+CGG + chr4.2:91571091-91571110 None:intergenic 30.0%
! TTTATACACTGATGCTTTTC+TGG - chr4.2:91574818-91574837 MS.gene053143:CDS 30.0%
! TTTTTGTAGTTTCCTGCTTA+GGG - chr4.2:91575338-91575357 MS.gene053143:CDS 30.0%
!! AAAATCACTTTGAAGCAGAA+GGG - chr4.2:91576120-91576139 MS.gene053143:CDS 30.0%
!! CATTTGTTGATGGATTTCTT+GGG - chr4.2:91572221-91572240 MS.gene053143:intron 30.0%
!! TAAAATCACTTTGAAGCAGA+AGG - chr4.2:91576119-91576138 MS.gene053143:CDS 30.0%
!! TACGAAGATTTTGACAGATT+AGG + chr4.2:91571317-91571336 None:intergenic 30.0%
!! TTGATAATGATTCTCATGAC+AGG - chr4.2:91572858-91572877 MS.gene053143:intron 30.0%
!! TTTGCTCCTTTTTCTAAGAA+TGG - chr4.2:91573098-91573117 MS.gene053143:intron 30.0%
!!! AGATTCAGCATGTTACTTTT+TGG + chr4.2:91574448-91574467 None:intergenic 30.0%
!!! GATTCAGCATGTTACTTTTT+GGG + chr4.2:91574447-91574466 None:intergenic 30.0%
!!! TGTATGCAAAGAGTGTTTTT+GGG - chr4.2:91575989-91576008 MS.gene053143:CDS 30.0%
AAATAGAGACGTAAAGGAGT+AGG + chr4.2:91574582-91574601 None:intergenic 35.0%
AATTCTGGTAGTAGATAGTC+AGG + chr4.2:91575701-91575720 None:intergenic 35.0%
ACAATCATGCTTCTAGATGA+TGG + chr4.2:91575453-91575472 None:intergenic 35.0%
ACGCAAATTAAAGGAACTCA+CGG + chr4.2:91575647-91575666 None:intergenic 35.0%
ACGCAACAATAACAGTCATA+AGG + chr4.2:91575673-91575692 None:intergenic 35.0%
ACTCCTTTACGTCTCTATTT+GGG - chr4.2:91574582-91574601 MS.gene053143:CDS 35.0%
ACTTCATGTGAACTCATTAG+AGG + chr4.2:91575119-91575138 None:intergenic 35.0%
AGAATCAAGCAAACAGATCA+AGG - chr4.2:91573671-91573690 MS.gene053143:CDS 35.0%
AGCACATTCATAAACAACAG+CGG + chr4.2:91571799-91571818 None:intergenic 35.0%
AGGAATAATAAGGGAGAGAA+AGG - chr4.2:91571729-91571748 MS.gene053143:intron 35.0%
ATAACCGCTCAATTTACCAT+CGG + chr4.2:91576052-91576071 None:intergenic 35.0%
ATACCATTAGGCTACTACTA+GGG + chr4.2:91574374-91574393 None:intergenic 35.0%
ATATGGTTATGGATGTCCTT+AGG - chr4.2:91571976-91571995 MS.gene053143:intron 35.0%
ATGAATCCCACAATCAGTTA+TGG + chr4.2:91575786-91575805 None:intergenic 35.0%
ATGTAGTTGTAGTACAGGTA+TGG - chr4.2:91575416-91575435 MS.gene053143:CDS 35.0%
CACTGACAAAGCTTATCTTA+AGG - chr4.2:91572723-91572742 MS.gene053143:intron 35.0%
CAGAATAAGAAGTAAAACCC+AGG - chr4.2:91576074-91576093 MS.gene053143:CDS 35.0%
CCATGAAGGAAGCTATAAAT+AGG - chr4.2:91575164-91575183 MS.gene053143:CDS 35.0%
CCTATTTATAGCTTCCTTCA+TGG + chr4.2:91575167-91575186 None:intergenic 35.0%
CTGTTTATAAGCTTCCTCAA+GGG - chr4.2:91571499-91571518 MS.gene053143:intron 35.0%
CTTGAGATCTCTGATTCTTT+CGG - chr4.2:91572667-91572686 MS.gene053143:intron 35.0%
GAAATCAAAGAATCTCTCGA+AGG - chr4.2:91571090-91571109 MS.gene053143:CDS 35.0%
GAATATAACTCCAGTTTCAG+TGG + chr4.2:91573715-91573734 None:intergenic 35.0%
GACAAAGCTTATCTTAAGGT+TGG - chr4.2:91572727-91572746 MS.gene053143:intron 35.0%
GACAGATTAGGATCATTTCA+GGG + chr4.2:91571305-91571324 None:intergenic 35.0%
GAGTGATATGCTGATAGATA+TGG - chr4.2:91574778-91574797 MS.gene053143:CDS 35.0%
GGAATAATAAGGGAGAGAAA+GGG - chr4.2:91571730-91571749 MS.gene053143:intron 35.0%
GGATACTTTCTATCAGATTC+GGG - chr4.2:91572343-91572362 MS.gene053143:intron 35.0%
GGATCGAAATAAGCAGTAAA+AGG + chr4.2:91573970-91573989 None:intergenic 35.0%
GGTTGTTATGATGCTTAAGA+AGG - chr4.2:91572082-91572101 MS.gene053143:intron 35.0%
GTCATAGGTTGCTGTAAATA+CGG - chr4.2:91575553-91575572 MS.gene053143:CDS 35.0%
GTGATGAGATAAGGAAGATA+TGG - chr4.2:91572915-91572934 MS.gene053143:intron 35.0%
TAAGTGTACTGAGCACATAA+CGG + chr4.2:91573312-91573331 None:intergenic 35.0%
TACACAGCAATCTAATGCAA+AGG + chr4.2:91572889-91572908 None:intergenic 35.0%
TACACCGAAGAATATTGATC+AGG - chr4.2:91572061-91572080 MS.gene053143:intron 35.0%
TACCACAACTCGACAAATAT+AGG + chr4.2:91573218-91573237 None:intergenic 35.0%
TACTCCTTTACGTCTCTATT+TGG - chr4.2:91574581-91574600 MS.gene053143:CDS 35.0%
TATACCATTAGGCTACTACT+AGG + chr4.2:91574375-91574394 None:intergenic 35.0%
TATGGTTATGGATGTCCTTA+GGG - chr4.2:91571977-91571996 MS.gene053143:intron 35.0%
TCAAGTGATAAAAGTCGATG+AGG + chr4.2:91573048-91573067 None:intergenic 35.0%
TCCAGATTCGATAAAATCGA+AGG + chr4.2:91571432-91571451 None:intergenic 35.0%
TCTGTTTATAAGCTTCCTCA+AGG - chr4.2:91571498-91571517 MS.gene053143:intron 35.0%
TGAAGCTTATTGTGCTTGAT+CGG - chr4.2:91571913-91571932 MS.gene053143:intron 35.0%
TGAATCCCACAATCAGTTAT+GGG + chr4.2:91575785-91575804 None:intergenic 35.0%
TGACAGATTAGGATCATTTC+AGG + chr4.2:91571306-91571325 None:intergenic 35.0%
TGCAATATATGCTTCGATGA+TGG - chr4.2:91574140-91574159 MS.gene053143:CDS 35.0%
TGTTATGATGCTTAAGAAGG+AGG - chr4.2:91572085-91572104 MS.gene053143:intron 35.0%
TGTTTATAAGCTTCCTCAAG+GGG - chr4.2:91571500-91571519 MS.gene053143:intron 35.0%
TGTTTGCATTTCACTGAGTT+AGG - chr4.2:91574632-91574651 MS.gene053143:CDS 35.0%
TTATCACTTGAAGAGCAGAA+AGG - chr4.2:91573057-91573076 MS.gene053143:intron 35.0%
TTATGGGCACTTCATTGTTT+AGG + chr4.2:91575769-91575788 None:intergenic 35.0%
TTGAGATCTCTGATTCTTTC+GGG - chr4.2:91572668-91572687 MS.gene053143:intron 35.0%
TTGATCTGTTTGCTTGATTC+TGG + chr4.2:91573672-91573691 None:intergenic 35.0%
TTGATGTTACTGTCATCAAC+CGG - chr4.2:91573556-91573575 MS.gene053143:CDS 35.0%
! AAGAAGGAGGAGTTTTTGAA+CGG + chr4.2:91571238-91571257 None:intergenic 35.0%
! ACAGTTACAAATGGTGGTTT+TGG - chr4.2:91571686-91571705 MS.gene053143:intron 35.0%
! ATGTTTGGAGTTAGCAACTA+TGG - chr4.2:91573602-91573621 MS.gene053143:CDS 35.0%
! CAATCTGTCTATGCTTTTCA+GGG - chr4.2:91573357-91573376 MS.gene053143:CDS 35.0%
! GTAATACTGGTGATGAGATA+AGG - chr4.2:91572906-91572925 MS.gene053143:intron 35.0%
! GTTTAGTGTTTTGTCAGTTG+GGG - chr4.2:91573260-91573279 MS.gene053143:intron 35.0%
! TAAATTCTGGAGAGTTTCCT+TGG + chr4.2:91573583-91573602 None:intergenic 35.0%
! TACCTATATTTGTCGAGTTG+TGG - chr4.2:91573213-91573232 MS.gene053143:intron 35.0%
! TACTGTTGTGCATTTGTTGA+TGG - chr4.2:91572211-91572230 MS.gene053143:intron 35.0%
! TAGGGAGATTATGGTTGATA+TGG - chr4.2:91571959-91571978 MS.gene053143:intron 35.0%
! TATAACTTTAAGAGCACAGG+GGG + chr4.2:91574089-91574108 None:intergenic 35.0%
! TCAATCTGTCTATGCTTTTC+AGG - chr4.2:91573356-91573375 MS.gene053143:CDS 35.0%
! TCCTTCGATTTTATCGAATC+TGG - chr4.2:91571428-91571447 MS.gene053143:intron 35.0%
! TGTTTGGAGTTAGCAACTAT+GGG - chr4.2:91573603-91573622 MS.gene053143:CDS 35.0%
! TTCTATCATCACTAGGCTTT+TGG - chr4.2:91572322-91572341 MS.gene053143:intron 35.0%
! TTGATAGGATCATTGATTGG+GGG - chr4.2:91571661-91571680 MS.gene053143:intron 35.0%
! TTGCTGTGCTTGATTTGATT+TGG - chr4.2:91575829-91575848 MS.gene053143:CDS 35.0%
! TTTAGTGTTTTGTCAGTTGG+GGG - chr4.2:91573261-91573280 MS.gene053143:intron 35.0%
!! GCATTTGTTGATGGATTTCT+TGG - chr4.2:91572220-91572239 MS.gene053143:intron 35.0%
!!! CTGTATGCAAAGAGTGTTTT+TGG - chr4.2:91575988-91576007 MS.gene053143:CDS 35.0%
!!! GTATGCAAAGAGTGTTTTTG+GGG - chr4.2:91575990-91576009 MS.gene053143:CDS 35.0%
AAGGTTTCTTCCACTGAAAC+TGG - chr4.2:91573702-91573721 MS.gene053143:CDS 40.0%
AAGTGCCCATAACTGATTGT+GGG - chr4.2:91575777-91575796 MS.gene053143:CDS 40.0%
ACACCCAAATAGAGACGTAA+AGG + chr4.2:91574588-91574607 None:intergenic 40.0%
ACACCGCGAATAAATTCGTT+CGG + chr4.2:91571354-91571373 None:intergenic 40.0%
ACATATGCTTCAGCATAGAC+AGG + chr4.2:91573510-91573529 None:intergenic 40.0%
ACGAGCTTAAGAGGGATAAT+AGG - chr4.2:91571940-91571959 MS.gene053143:intron 40.0%
AGGGATCTCTGTCTTCTATT+GGG - chr4.2:91572642-91572661 MS.gene053143:intron 40.0%
AGTGGAAGAAACCTTGATGT+TGG + chr4.2:91573697-91573716 None:intergenic 40.0%
ATACGGTATTGCAAGATGAG+AGG - chr4.2:91575570-91575589 MS.gene053143:CDS 40.0%
ATAGGGAACACACAACACAA+AGG + chr4.2:91574501-91574520 None:intergenic 40.0%
ATCCTCAGAGATGGTGTAAA+AGG + chr4.2:91572477-91572496 None:intergenic 40.0%
ATCCTTTGTAAACTCTCCAG+TGG + chr4.2:91573433-91573452 None:intergenic 40.0%
ATGATAGAAACACGCAGCTT+AGG + chr4.2:91572311-91572330 None:intergenic 40.0%
ATGCCTGTAGCTATTCAAAG+TGG + chr4.2:91574737-91574756 None:intergenic 40.0%
ATTGCAAACAGAACGATGTC+AGG + chr4.2:91574126-91574145 None:intergenic 40.0%
CAAATTAAAGGAACTCACGG+TGG + chr4.2:91575644-91575663 None:intergenic 40.0%
CAATCCGATGGTAAATTGAG+CGG - chr4.2:91576045-91576064 MS.gene053143:CDS 40.0%
CAATTTGGTCCTGTCTTGAT+GGG - chr4.2:91575214-91575233 MS.gene053143:CDS 40.0%
CAGCATATCACTCATACTGT+GGG + chr4.2:91574771-91574790 None:intergenic 40.0%
CATTGAGACCATGATCAACA+AGG + chr4.2:91572801-91572820 None:intergenic 40.0%
CGAGCTTAAGAGGGATAATA+GGG - chr4.2:91571941-91571960 MS.gene053143:intron 40.0%
GAAGGAAGCTATAAATAGGC+AGG - chr4.2:91575168-91575187 MS.gene053143:CDS 40.0%
GAGGGATAATAGGGAGATTA+TGG - chr4.2:91571950-91571969 MS.gene053143:intron 40.0%
GCAACTATTAAGCAGTGTCT+TGG - chr4.2:91572443-91572462 MS.gene053143:intron 40.0%
GCAATCATGCTTCTCCTTAA+CGG - chr4.2:91571150-91571169 MS.gene053143:CDS 40.0%
GCTTATCTTAAGGTTGGAAG+AGG - chr4.2:91572733-91572752 MS.gene053143:intron 40.0%
GTATTGTTTGTCTCTTTCGG+AGG - chr4.2:91572406-91572425 MS.gene053143:intron 40.0%
TAAAAGTCGATGAGGTCATC+AGG + chr4.2:91573040-91573059 None:intergenic 40.0%
TACAAATGTTGCGTCTGCTA+TGG - chr4.2:91572247-91572266 MS.gene053143:intron 40.0%
TACCATTAGGCTACTACTAG+GGG + chr4.2:91574373-91574392 None:intergenic 40.0%
TACGGTATTGCAAGATGAGA+GGG - chr4.2:91575571-91575590 MS.gene053143:CDS 40.0%
TACTGCTTATTTCGATCCCT+GGG - chr4.2:91573972-91573991 MS.gene053143:intron 40.0%
TCAATTTGGTCCTGTCTTGA+TGG - chr4.2:91575213-91575232 MS.gene053143:CDS 40.0%
TCACCGAACGAATTTATTCG+CGG - chr4.2:91571348-91571367 MS.gene053143:intron 40.0%
TCAGCATATCACTCATACTG+TGG + chr4.2:91574772-91574791 None:intergenic 40.0%
TCCTCAGAGATGGTGTAAAA+GGG + chr4.2:91572476-91572495 None:intergenic 40.0%
TGAGATAAGGAAGATATGGC+TGG - chr4.2:91572919-91572938 MS.gene053143:intron 40.0%
TGAGTTTGAGTGGGAAAACA+AGG - chr4.2:91573869-91573888 MS.gene053143:intron 40.0%
TGATAGAAACACGCAGCTTA+GGG + chr4.2:91572310-91572329 None:intergenic 40.0%
TGATTTCGAGGTAAAGAAGG+AGG + chr4.2:91571251-91571270 None:intergenic 40.0%
TGCCTGTAGCTATTCAAAGT+GGG + chr4.2:91574736-91574755 None:intergenic 40.0%
TGCCTTTGCTTTAATCTCCT+CGG + chr4.2:91572999-91573018 None:intergenic 40.0%
TTACTGCTTATTTCGATCCC+TGG - chr4.2:91573971-91573990 MS.gene053143:intron 40.0%
TTCACAGTCCTTGTTGATCA+TGG - chr4.2:91572790-91572809 MS.gene053143:intron 40.0%
! ATGAGAAGAATGGGGAGTAT+AGG - chr4.2:91572132-91572151 MS.gene053143:intron 40.0%
! CTAGAAGCATGATTGTGACA+GGG - chr4.2:91575457-91575476 MS.gene053143:CDS 40.0%
! CTTCTAGATGATGGCCAATT+TGG + chr4.2:91575444-91575463 None:intergenic 40.0%
! GATTCTGAGAAAGCTACAGA+TGG + chr4.2:91575252-91575271 None:intergenic 40.0%
! GCTGTTGTTTATGAATGTGC+TGG - chr4.2:91571798-91571817 MS.gene053143:intron 40.0%
! TCTAGAAGCATGATTGTGAC+AGG - chr4.2:91575456-91575475 MS.gene053143:CDS 40.0%
! TCTTGTGCTCTGTGGATTAT+TGG - chr4.2:91572380-91572399 MS.gene053143:intron 40.0%
! TGAAGAGCAGAAAGGTATGA+TGG - chr4.2:91573065-91573084 MS.gene053143:intron 40.0%
! TGAATGATGGAAATCACCCT+AGG - chr4.2:91575093-91575112 MS.gene053143:CDS 40.0%
! TGATAGGATCATTGATTGGG+GGG - chr4.2:91571662-91571681 MS.gene053143:intron 40.0%
! TGCGTGTTTCTATCATCACT+AGG - chr4.2:91572315-91572334 MS.gene053143:intron 40.0%
! TTGTGCTATTAAGTTTCCGG+AGG - chr4.2:91572181-91572200 MS.gene053143:intron 40.0%
! TTTCGGGTGATTTCTTCCTT+GGG - chr4.2:91572684-91572703 MS.gene053143:intron 40.0%
!! ATGTGGCCTTTAGAACTATG+TGG - chr4.2:91573844-91573863 MS.gene053143:intron 40.0%
!! GGTTGATGACAGTAACATCA+AGG + chr4.2:91573557-91573576 None:intergenic 40.0%
!! TGTGGCCTTTAGAACTATGT+GGG - chr4.2:91573845-91573864 MS.gene053143:intron 40.0%
!! TTTTACACCATCTCTGAGGA+TGG - chr4.2:91572476-91572495 MS.gene053143:intron 40.0%
!!! TACTTTTTGGGTGCAATGAC+AGG + chr4.2:91574435-91574454 None:intergenic 40.0%
AAAATGGAAAAATGGGGCCC+AGG + chr4.2:91573992-91574011 None:intergenic 45.0%
AAATGGAAAAATGGGGCCCA+GGG + chr4.2:91573991-91574010 None:intergenic 45.0%
AAGACTCAGAGCAATTCCCT+GGG + chr4.2:91576094-91576113 None:intergenic 45.0%
AATCGCATTCTTCAGCTCAC+TGG - chr4.2:91573474-91573493 MS.gene053143:CDS 45.0%
AATGTGTGATGCTGCTGTCT+GGG - chr4.2:91574704-91574723 MS.gene053143:CDS 45.0%
ACAAATGAGAGAAGGAGGAG+AGG + chr4.2:91573901-91573920 None:intergenic 45.0%
ACAGATCAAGGCCAACATCA+AGG - chr4.2:91573683-91573702 MS.gene053143:CDS 45.0%
AGCAAGATGCTTCGAGTAAG+AGG - chr4.2:91571574-91571593 MS.gene053143:CDS 45.0%
ATCGCATTCTTCAGCTCACT+GGG - chr4.2:91573475-91573494 MS.gene053143:CDS 45.0%
ATGACGGTGATGAAGAGTTG+AGG + chr4.2:91571186-91571205 None:intergenic 45.0%
CAGGGATCTCTGTCTTCTAT+TGG - chr4.2:91572641-91572660 MS.gene053143:intron 45.0%
CGGTGATTTCGAGGTAAAGA+AGG + chr4.2:91571254-91571273 None:intergenic 45.0%
CGTCTCTATTTGGGTGTGAA+AGG - chr4.2:91574591-91574610 MS.gene053143:CDS 45.0%
CTATTTGGGTGTGAAAGGAG+AGG - chr4.2:91574596-91574615 MS.gene053143:CDS 45.0%
CTCATCGTTCACTTCGACAA+AGG - chr4.2:91571048-91571067 MS.gene053143:CDS 45.0%
CTTTAATCTCCTCGGTCTCA+CGG + chr4.2:91572991-91573010 None:intergenic 45.0%
CTTTGTCGAAGTGAACGATG+AGG + chr4.2:91571050-91571069 None:intergenic 45.0%
GACCGAGGAGATTAAAGCAA+AGG - chr4.2:91572994-91573013 MS.gene053143:intron 45.0%
GAGAACTTTACCGCGAGAAT+CGG + chr4.2:91571283-91571302 None:intergenic 45.0%
GCTCAGTACACTTACTCATC+TGG - chr4.2:91573318-91573337 MS.gene053143:CDS 45.0%
GGTGATGAAGAGTTGAGGAA+TGG + chr4.2:91571181-91571200 None:intergenic 45.0%
GTGAAAGGAGAGGTAGATCT+CGG - chr4.2:91574606-91574625 MS.gene053143:CDS 45.0%
GTGAACTCATTAGAGGCCTA+GGG + chr4.2:91575112-91575131 None:intergenic 45.0%
TAATGTGTGATGCTGCTGTC+TGG - chr4.2:91574703-91574722 MS.gene053143:CDS 45.0%
TCGGCTTAACGAGCTTAAGA+GGG - chr4.2:91571932-91571951 MS.gene053143:intron 45.0%
TCTCTTGTTCAGCTCTGCAT+TGG - chr4.2:91575936-91575955 MS.gene053143:CDS 45.0%
TGCCACTGGAGAGTTTACAA+AGG - chr4.2:91573428-91573447 MS.gene053143:CDS 45.0%
TGCCCACTTTGAATAGCTAC+AGG - chr4.2:91574731-91574750 MS.gene053143:CDS 45.0%
TGCTATTAAGTTTCCGGAGG+TGG - chr4.2:91572184-91572203 MS.gene053143:intron 45.0%
TGTGAACTCATTAGAGGCCT+AGG + chr4.2:91575113-91575132 None:intergenic 45.0%
TTATAGCTAAGGCCCTAAGC+AGG + chr4.2:91575353-91575372 None:intergenic 45.0%
TTCGGGTGATTTCTTCCTTG+GGG - chr4.2:91572685-91572704 MS.gene053143:intron 45.0%
TTGGGGGGAACAGTTACAAA+TGG - chr4.2:91571677-91571696 MS.gene053143:intron 45.0%
TTGTTCAGCTCTGCATTGGA+AGG - chr4.2:91575940-91575959 MS.gene053143:CDS 45.0%
! ACCGATAAAACCGATTCTCG+CGG - chr4.2:91571270-91571289 MS.gene053143:intron 45.0%
! AGCATTGAGAAGCAATCCGA+TGG - chr4.2:91576033-91576052 MS.gene053143:CDS 45.0%
! AGGGAATTGCTCTGAGTCTT+GGG - chr4.2:91576094-91576113 MS.gene053143:CDS 45.0%
! ATCGGCTTAACGAGCTTAAG+AGG - chr4.2:91571931-91571950 MS.gene053143:intron 45.0%
! CTTTCGGGTGATTTCTTCCT+TGG - chr4.2:91572683-91572702 MS.gene053143:intron 45.0%
! GAAAGTACGCGTACAGAAGT+TGG + chr4.2:91574294-91574313 None:intergenic 45.0%
! GAAGTGCCCATAACTGATTG+TGG - chr4.2:91575776-91575795 MS.gene053143:CDS 45.0%
! GTACAGGTATGGTGCCAAAT+TGG - chr4.2:91575427-91575446 MS.gene053143:CDS 45.0%
! TATGTGGGCTGAGTTTGAGT+GGG - chr4.2:91573860-91573879 MS.gene053143:intron 45.0%
! TCCCTTTTACACCATCTCTG+AGG - chr4.2:91572472-91572491 MS.gene053143:intron 45.0%
!! ACACTGATGCTTTTCTGGCA+AGG - chr4.2:91574823-91574842 MS.gene053143:CDS 45.0%
!! ACCGCGAGAATCGGTTTTAT+CGG + chr4.2:91571274-91571293 None:intergenic 45.0%
!! CGGTTTTATCGGTGATTTCG+AGG + chr4.2:91571263-91571282 None:intergenic 45.0%
!! CTCAGCCCACATAGTTCTAA+AGG + chr4.2:91573853-91573872 None:intergenic 45.0%
!! TAGACTTGATAATGTGGCCC+AGG + chr4.2:91575601-91575620 None:intergenic 45.0%
!! TGGATGTGGTTGTTTTCGTG+CGG - chr4.2:91572267-91572286 MS.gene053143:intron 45.0%
!!! TGTTTTTGGGGAAGATGCTC+TGG - chr4.2:91576002-91576021 MS.gene053143:CDS 45.0%
AAAGGAGAGGTAGATCTCGG+TGG - chr4.2:91574609-91574628 MS.gene053143:CDS 50.0%
AAGACAGAGATCCCTGCACA+AGG + chr4.2:91572637-91572656 None:intergenic 50.0%
ACAGCGTTTCGTCTCACGAA+AGG + chr4.2:91571465-91571484 None:intergenic 50.0%
ACTCGACCACTGTGTCTTCT+AGG - chr4.2:91572537-91572556 MS.gene053143:intron 50.0%
AGACAGAGATCCCTGCACAA+GGG + chr4.2:91572636-91572655 None:intergenic 50.0%
AGATATGGCTGGAATCCTGC+AGG - chr4.2:91572930-91572949 MS.gene053143:intron 50.0%
AGGTTGTTAAGACGCAGAGC+GGG - chr4.2:91572105-91572124 MS.gene053143:intron 50.0%
AGTCTCAAGAGCAGCACTCT+GGG + chr4.2:91572597-91572616 None:intergenic 50.0%
ATGGTCTCAATGCTGCAGCT+TGG - chr4.2:91572809-91572828 MS.gene053143:intron 50.0%
CAAGACTCAGAGCAATTCCC+TGG + chr4.2:91576095-91576114 None:intergenic 50.0%
CAAGATGAGAGGGAGTTCCT+GGG - chr4.2:91575581-91575600 MS.gene053143:CDS 50.0%
CATCGCAAGTGAGGACGTAA+CGG + chr4.2:91571209-91571228 None:intergenic 50.0%
CCAACTTGAGCTCGAAGATG+AGG - chr4.2:91573386-91573405 MS.gene053143:CDS 50.0%
CCTCATCTTCGAGCTCAAGT+TGG + chr4.2:91573389-91573408 None:intergenic 50.0%
CTATCAGATTCGGGCTGCTA+GGG - chr4.2:91572352-91572371 MS.gene053143:intron 50.0%
GACGATCTTAAACGTGCCAC+TGG - chr4.2:91573414-91573433 MS.gene053143:CDS 50.0%
GAGGAATGGTTTCGCCGTTA+AGG + chr4.2:91571167-91571186 None:intergenic 50.0%
GAGGTTGTTAAGACGCAGAG+CGG - chr4.2:91572104-91572123 MS.gene053143:intron 50.0%
GCGTCCACAAAACTACACTC+TGG - chr4.2:91573644-91573663 MS.gene053143:CDS 50.0%
GGGGGAACAGTTACAAATGG+TGG - chr4.2:91571680-91571699 MS.gene053143:intron 50.0%
GTATAGGCAGATGTTGGTGC+AGG - chr4.2:91572148-91572167 MS.gene053143:intron 50.0%
GTCCCCTAGTAGTAGCCTAA+TGG - chr4.2:91574368-91574387 MS.gene053143:CDS 50.0%
TACTGTCATCAACCGGACCA+AGG - chr4.2:91573563-91573582 MS.gene053143:CDS 50.0%
TCTATCAGATTCGGGCTGCT+AGG - chr4.2:91572351-91572370 MS.gene053143:intron 50.0%
TCTCTTTCGGAGGTTGAGAG+TGG - chr4.2:91572416-91572435 MS.gene053143:intron 50.0%
TCTGCATTGGAAGGTGAGTG+TGG - chr4.2:91575949-91575968 MS.gene053143:CDS 50.0%
TCTGGAGAGTTTCCTTGGTC+CGG + chr4.2:91573578-91573597 None:intergenic 50.0%
TGTACGCGTACTTTCCACCT+TGG - chr4.2:91574299-91574318 MS.gene053143:CDS 50.0%
TGTTGCGTCTGCTATGGATG+TGG - chr4.2:91572253-91572272 MS.gene053143:intron 50.0%
TTGATTTCGGTTGCGAGTGC+TGG + chr4.2:91571078-91571097 None:intergenic 50.0%
TTTCCCAAGCCCATCAAGAC+AGG + chr4.2:91575226-91575245 None:intergenic 50.0%
! ACCATCTCTGAGGATGGAGA+GGG - chr4.2:91572482-91572501 MS.gene053143:intron 50.0%
! ATTCGCAGCCGCTTTAATCG+CGG + chr4.2:91571853-91571872 None:intergenic 50.0%
! CAGGGAATTGCTCTGAGTCT+TGG - chr4.2:91576093-91576112 MS.gene053143:CDS 50.0%
! CTATGTGGGCTGAGTTTGAG+TGG - chr4.2:91573859-91573878 MS.gene053143:intron 50.0%
! GAGCTTTGTGAAGATGCTCG+CGG - chr4.2:91572955-91572974 MS.gene053143:intron 50.0%
! GGGAATTGCTCTGAGTCTTG+GGG - chr4.2:91576095-91576114 MS.gene053143:CDS 50.0%
! GGGTTTGTTCTTGTGCTCTG+TGG - chr4.2:91572372-91572391 MS.gene053143:intron 50.0%
! TCCTGCATCTTGTGCTGATG+TGG - chr4.2:91573827-91573846 MS.gene053143:intron 50.0%
! TGGGGAGTATAGGCAGATGT+TGG - chr4.2:91572142-91572161 MS.gene053143:intron 50.0%
!! AGTGAGGACGTAACGGATGA+CGG + chr4.2:91571202-91571221 None:intergenic 50.0%
!! GGAGCCAGAGTGTAGTTTTG+TGG + chr4.2:91573651-91573670 None:intergenic 50.0%
!! GGATGTGGTTGTTTTCGTGC+GGG - chr4.2:91572268-91572287 MS.gene053143:intron 50.0%
!! TAGGAGTCGAAAGTGCCCTA+AGG + chr4.2:91571995-91572014 None:intergenic 50.0%
AAGGAACTCACGGTGGAGTC+AGG + chr4.2:91575637-91575656 None:intergenic 55.0%
ACAACAGTACTCGCCACCTC+CGG + chr4.2:91572200-91572219 None:intergenic 55.0%
ACCCTCTCCATCCTCAGAGA+TGG + chr4.2:91572486-91572505 None:intergenic 55.0%
ACCTGCTGCACAGCCTTTGA+TGG + chr4.2:91572515-91572534 None:intergenic 55.0%
AGAGATCCCTGCACAAGGGT+AGG + chr4.2:91572632-91572651 None:intergenic 55.0%
AGAGGGTCAGGAGCCATCAA+AGG - chr4.2:91572499-91572518 MS.gene053143:intron 55.0%
AGCAGCACTCTGGGTAGCAT+AGG + chr4.2:91572588-91572607 None:intergenic 55.0%
AGGCCTCCTAGAAGACACAG+TGG + chr4.2:91572546-91572565 None:intergenic 55.0%
CAGTCTCAAGAGCAGCACTC+TGG + chr4.2:91572598-91572617 None:intergenic 55.0%
CGACCACTGTGTCTTCTAGG+AGG - chr4.2:91572540-91572559 MS.gene053143:intron 55.0%
CGGTGTGATCATCGCAAGTG+AGG + chr4.2:91571218-91571237 None:intergenic 55.0%
CTGGGTAGCATAGGTCCCAT+CGG + chr4.2:91572579-91572598 None:intergenic 55.0%
CTTCACAAAGCTCTGCCTGC+AGG + chr4.2:91572948-91572967 None:intergenic 55.0%
GAGGTCATCAGGCTGTGCAT+TGG + chr4.2:91573029-91573048 None:intergenic 55.0%
GCAAGATGAGAGGGAGTTCC+TGG - chr4.2:91575580-91575599 MS.gene053143:CDS 55.0%
GCCACATCAGCACAAGATGC+AGG + chr4.2:91573831-91573850 None:intergenic 55.0%
GGTTGTTAAGACGCAGAGCG+GGG - chr4.2:91572106-91572125 MS.gene053143:intron 55.0%
TACATGCGACAACTGCCCCA+AGG + chr4.2:91572703-91572722 None:intergenic 55.0%
TCAAGCAACTGCTCCCCTTG+AGG + chr4.2:91571516-91571535 None:intergenic 55.0%
TGAGCTCGAAGATGAGGTGC+AGG - chr4.2:91573392-91573411 MS.gene053143:CDS 55.0%
! AGCGGGGAGCATGAGAAGAA+TGG - chr4.2:91572122-91572141 MS.gene053143:intron 55.0%
! CACCATCTCTGAGGATGGAG+AGG - chr4.2:91572481-91572500 MS.gene053143:intron 55.0%
! CGGGGAGCATGAGAAGAATG+GGG - chr4.2:91572124-91572143 MS.gene053143:intron 55.0%
! GCGGGGAGCATGAGAAGAAT+GGG - chr4.2:91572123-91572142 MS.gene053143:intron 55.0%
! TGCACCGACCGCGATTAAAG+CGG - chr4.2:91571842-91571861 MS.gene053143:intron 55.0%
!! GGTCCTGTCTTGATGGGCTT+GGG - chr4.2:91575220-91575239 MS.gene053143:CDS 55.0%
!! TGGTCCTGTCTTGATGGGCT+TGG - chr4.2:91575219-91575238 MS.gene053143:CDS 55.0%
AGGCCTGCGATTCTTGCCGA+TGG - chr4.2:91572560-91572579 MS.gene053143:intron 60.0%
CACAAGGGTAGGCGGTGACA+TGG + chr4.2:91572621-91572640 None:intergenic 60.0%
CGCGGTCGGTGCAGAACTAA+GGG + chr4.2:91571835-91571854 None:intergenic 60.0%
GATCCCTGCACAAGGGTAGG+CGG + chr4.2:91572629-91572648 None:intergenic 60.0%
GCCATCAAAGGCTGTGCAGC+AGG - chr4.2:91572511-91572530 MS.gene053143:intron 60.0%
GGCCTGCGATTCTTGCCGAT+GGG - chr4.2:91572561-91572580 MS.gene053143:intron 60.0%
GTCCCATCGGCAAGAATCGC+AGG + chr4.2:91572566-91572585 None:intergenic 60.0%
TCACCGCCTACCCTTGTGCA+GGG - chr4.2:91572623-91572642 MS.gene053143:intron 60.0%
TCGCGGTCGGTGCAGAACTA+AGG + chr4.2:91571836-91571855 None:intergenic 60.0%
! CTCTGAGGATGGAGAGGGTC+AGG - chr4.2:91572487-91572506 MS.gene053143:intron 60.0%
! GCAGCCGCTTTAATCGCGGT+CGG + chr4.2:91571849-91571868 None:intergenic 60.0%
GTCACCGCCTACCCTTGTGC+AGG - chr4.2:91572622-91572641 MS.gene053143:intron 65.0%
TAAGCAGCGCCGTGAGACCG+AGG - chr4.2:91572979-91572998 MS.gene053143:intron 65.0%


Chromosome Type Strat End Strand Name
chr4.2 gene 91571030 91576155 91571030 ID=MS.gene053143
chr4.2 mRNA 91571030 91576155 91571030 ID=MS.gene053143.t1;Parent=MS.gene053143
chr4.2 exon 91574107 91576155 91574107 ID=MS.gene053143.t1.exon1;Parent=MS.gene053143.t1
chr4.2 CDS 91574107 91576155 91574107 ID=cds.MS.gene053143.t1;Parent=MS.gene053143.t1
chr4.2 exon 91573295 91573807 91573295 ID=MS.gene053143.t1.exon2;Parent=MS.gene053143.t1
chr4.2 CDS 91573295 91573807 91573295 ID=cds.MS.gene053143.t1;Parent=MS.gene053143.t1
chr4.2 exon 91571540 91571625 91571540 ID=MS.gene053143.t1.exon3;Parent=MS.gene053143.t1
chr4.2 CDS 91571540 91571625 91571540 ID=cds.MS.gene053143.t1;Parent=MS.gene053143.t1
chr4.2 exon 91571030 91571237 91571030 ID=MS.gene053143.t1.exon4;Parent=MS.gene053143.t1
chr4.2 CDS 91571030 91571237 91571030 ID=cds.MS.gene053143.t1;Parent=MS.gene053143.t1
Gene Sequence

>MS.gene053143

ATGGAGAAATCATGCAGCCTCATCGTTCACTTCGACAAAGGAACACCAGCACTCGCAACCGAAATCAAAGAATCTCTCGAAGGAAACGACGTCGCTGCAAAAATCGAAGCTCTCAAAAAAGCAATCATGCTTCTCCTTAACGGCGAAACCATTCCTCAACTCTTCATCACCGTCATCCGTTACGTCCTCACTTGCGATGATCACACCGTTCAAAAACTCCTCCTTCTTTACCTCGAAATCACCGATAAAACCGATTCTCGCGGTAAAGTTCTCCCTGAAATGATCCTAATCTGTCAAAATCTTCGTAACAATCTTCAATCACCGAACGAATTTATTCGCGGTGTTACTTTACGATTTCTGTGTAGAATTAACGAATCTGAGATTGTTGAACCGTTGATTCCTTCGATTTTATCGAATCTGGAGCATCGTCATCCTTTCGTGAGACGAAACGCTGTTCTCGCTGTTATGTCTGTTTATAAGCTTCCTCAAGGGGAGCAGTTGCTTGATTCTGCTCCTGAGATTGTTGAGAAATTTCTTGTTTCGGAGCAAGATGCTTCGAGTAAGAGGAACGCGTTTTTAATGCTGTTTTCGTGTGCGCAAGATCGTGCTGTGAATTATCTTTTTACGAATATTGATAGGATCATTGATTGGGGGGAACAGTTACAAATGGTGGTTTTGGAATTGATTAAGAAAGTTTGTAGGAATAATAAGGGAGAGAAAGGGAAATATATTAAGATTATTATTTCTTTGTTGAGTGCTAATTCTACCGCTGTTGTTTATGAATGTGCTGGTACGCTTGTTTCCCTTAGTTCTGCACCGACCGCGATTAAAGCGGCTGCGAATACTTATTGTCAGTTGTTGCTTTCTCAAAGTGATAACAATGTGAAGCTTATTGTGCTTGATCGGCTTAACGAGCTTAAGAGGGATAATAGGGAGATTATGGTTGATATGGTTATGGATGTCCTTAGGGCACTTTCGACTCCTAATCATGATATTAGAAGGAAAACTATTGATATTGCTCTTGAGCTTATTACACCGAAGAATATTGATCAGGTTGTTATGATGCTTAAGAAGGAGGTTGTTAAGACGCAGAGCGGGGAGCATGAGAAGAATGGGGAGTATAGGCAGATGTTGGTGCAGGCAATTCATACTTGTGCTATTAAGTTTCCGGAGGTGGCGAGTACTGTTGTGCATTTGTTGATGGATTTCTTGGGAGATACAAATGTTGCGTCTGCTATGGATGTGGTTGTTTTCGTGCGGGAGATTATTGAGACAAACCCTAAGCTGCGTGTTTCTATCATCACTAGGCTTTTGGATACTTTCTATCAGATTCGGGCTGCTAGGGTTTGTTCTTGTGCTCTGTGGATTATTGGTGAGTATTGTTTGTCTCTTTCGGAGGTTGAGAGTGGAATTGCAACTATTAAGCAGTGTCTTGGTGATCTTCCCTTTTACACCATCTCTGAGGATGGAGAGGGTCAGGAGCCATCAAAGGCTGTGCAGCAGGTGAACTCGACCACTGTGTCTTCTAGGAGGCCTGCGATTCTTGCCGATGGGACCTATGCTACCCAGAGTGCTGCTCTTGAGACTGCCATGTCACCGCCTACCCTTGTGCAGGGATCTCTGTCTTCTATTGGGAACTTGAGATCTCTGATTCTTTCGGGTGATTTCTTCCTTGGGGCAGTTGTCGCATGTACACTGACAAAGCTTATCTTAAGGTTGGAAGAGGTTCAAACCTCAAAAGTTGAAGTTAACAAGGCAACTTCACAGTCCTTGTTGATCATGGTCTCAATGCTGCAGCTTGGTCAGTCTTCAGTTCTTCCACATCCAATTGATAATGATTCTCATGACAGGGTCGTCCTTTGCATTAGATTGCTGTGTAATACTGGTGATGAGATAAGGAAGATATGGCTGGAATCCTGCAGGCAGAGCTTTGTGAAGATGCTCGCGGATAAGCAGCGCCGTGAGACCGAGGAGATTAAAGCAAAGGCACAGATTTCCAATGCACAGCCTGATGACCTCATCGACTTTTATCACTTGAAGAGCAGAAAGGTATGATGGTTGTATTTTATTTGCTCCTTTTTCTAAGAATGGTATAGTTGAATCATTGTTTCATTAGATTCCTTGAAGTTTTTGTTTTGCATGTTTTCATCATTTCTAGTGATTGAACTATTTTGTTGCTTTTATACCTATATTTGTCGAGTTGTGGTATTTCTTGAATTCGTCAGATGAAGTTTAGTGTTTTGTCAGTTGGGGGTAGCTTATGTCGATGATTTATGATTCCGTTATGTGCTCAGTACACTTACTCATCTGGTATTCATTCAAATGTTCAATCTGTCTATGCTTTTCAGGGTATGAGCCAACTTGAGCTCGAAGATGAGGTGCAGGACGATCTTAAACGTGCCACTGGAGAGTTTACAAAGGATGCTGATGATGCAAATAAACTTAATCGCATTCTTCAGCTCACTGGGTTCAGTGATCCTGTCTATGCTGAAGCATATGTAACAGTGCATCATTATGACATTGTCCTTGATGTTACTGTCATCAACCGGACCAAGGAAACTCTCCAGAATTTATGTTTGGAGTTAGCAACTATGGGTGATCTCAAACTTGTTGAGCGTCCACAAAACTACACTCTGGCTCCAGAATCAAGCAAACAGATCAAGGCCAACATCAAGGTTTCTTCCACTGAAACTGGAGTTATATTCGGCAATATAGTTTATGAGACATCTTCAAATGTTCTTGAGAGAACAGTTATTGTTCTAAATGACATTCATATTGATATCATGGACTATATTGCTCCTGCATCTTGTGCTGATGTGGCCTTTAGAACTATGTGGGCTGAGTTTGAGTGGGAAAACAAGGTATATACCTCTCCTCCTTCTCTCATTTGTTATATTTTTATATATAATATAAAAGTTGAAAAAGATTATGGTTCTACCTTTTACTGCTTATTTCGATCCCTGGGCCCCATTTTTCCATTTTAAAAATTGCATGAAAAACAACTTCTAGGTACTTTAGATTCATGATTCATGGTAATCTCTATTACTGGGCTGTTGCCCCCTGTGCTCTTAAAGTTATATTGTTTGATATAATCCTGACATCGTTCTGTTTGCAATATATGCTTCGATGATGGTATATTAATGGTTGGACGTAATCTATGATTCTATTTTCATATTGAACTATTGAAGTTGGTGTACTTGTATTAATACTTTTTTTTCGTGGTTATTGTTAATTTTGTCTTGATTGCATTGAAGTTTGAAACCAACTTCTGTACGCGTACTTTCCACCTTGGTAAAATTGTAAGATGATACATGAGAGAAAAACACGCAGAATATTTAGTCCCCTAGTAGTAGCCTAATGGTATATGTATAAGCTGTAAGAATTTCTAGGTTTATCTTCTATCCTGTCATTGCACCCAAAAAGTAACATGCTGAATCTTTATATTGTTGTCTCTGTTGAGTAAATTGACCTTTGTGTTGTGTGTTCCCTATATATATGATTTATCCTAAGAGACGATAACAATAATGAGGTAATTTATATGCTGCTGCTCCTACTCCTTTACGTCTCTATTTGGGTGTGAAAGGAGAGGTAGATCTCGGTGGTGTTTGCATTTCACTGAGTTAGGAATAAGATACTGAATCTTGTATCAATTTTCTAGTTTATAGATCTGTTATAATGTGTGATGCTGCTGTCTGGGTTATTGCCCACTTTGAATAGCTACAGGCATGAGTATCACATCCCACAGTATGAGTGATATGCTGATAGATATGGATTTTTTTTTAATTTTTTTTATACACTGATGCTTTTCTGGCAAGGTACATTAGTATATTACAGTATCACAGTTTTTTTTTAATTAAATGTATATTTGTAAATACAAAATATTCAATGAAACATATATCTGTATCCGCATTAACAACATAAAATTATTTTCTAAGACAAATTTGGGGTTGAATAAGTATTGACTATTGTAATAACTAAATGAATTATTAGAAAGACTTGTGTCCTAAATAAAACAAAAAATAGGAAAAGAAATACAAAAATATTGACTATTGTAATAACTACATGAATGATGGAAATCACCCTAGGCCTCTAATGAGTTCACATGAAGTTTCAGAAGCTGCTCTAATTTTTTTTCCATGAAGGAAGCTATAAATAGGCAGGTTTCTCTTACTGTTTCAATGACTCAATTTGGTCCTGTCTTGATGGGCTTGGGAAACTGCCATCTGTAGCTTTCTCAGAATCACAGACATGCAATTCATCCAAAAATGAATGAATCACAGCTTAGAGCTATACTCATTGCTCACTTAATTTTTGTAGTTTCCTGCTTAGGGCCTTAGCTATAATCTGTTTACTCATATCAATAATGTTATTCTGTTAGATAAATGTATGTAGTTGTAGTACAGGTATGGTGCCAAATTGGCCATCATCTAGAAGCATGATTGTGACAGGGATATGCACTCAGAATGTGTTTCTGCATTAACTAGATGTTGTATGCGTGATTCTTTTATTAACATCAATTTTATGTCATAGGTTGCTGTAAATACGGTATTGCAAGATGAGAGGGAGTTCCTGGGCCACATTATCAAGTCTACAAATATGAAGTGCCTGACTCCACCGTGAGTTCCTTTAATTTGCGTAAACCTTATGACTGTTATTGTTGCGTCAGTGCCTGACTATCTACTACCAGAATTCTGTTTTTCTTTTTAAGGAAAAATGTTTTTCAATTAAAAAACATGCCTAAACAATGAAGTGCCCATAACTGATTGTGGGATTCATTAATATTTCTACATTTTATATAATTGCTGTGCTTGATTTGATTTGGTACCCATGCAATTTGTTTAATTTGGTACCCATGCAATTTGTTTAATTTGGTACCCATGCAATTTGTTTAATTTGGTTTTCATTGTCTCTTGTTCAGCTCTGCATTGGAAGGTGAGTGTGGTTTTCTAGCTGCAAATCTGTATGCAAAGAGTGTTTTTGGGGAAGATGCTCTGGTGAATGTTAGCATTGAGAAGCAATCCGATGGTAAATTGAGCGGTTATATCAGAATAAGAAGTAAAACCCAGGGAATTGCTCTGAGTCTTGGGGATAAAATCACTTTGAAGCAGAAGGGAACTGCTCAATAG

Protein sequence

>MS.gene053143.t1

MEKSCSLIVHFDKGTPALATEIKESLEGNDVAAKIEALKKAIMLLLNGETIPQLFITVIRYVLTCDDHTVQKLLLLYLEITDKTDSRGKVLPEMILICQNLRNNLQSPNEFIRGVTLRFLCRINESEIVEPLIPSILSNLEHRHPFVRRNAVLAVMSVYKLPQGEQLLDSAPEIVEKFLVSEQDASSKRNAFLMLFSCAQDRAVNYLFTNIDRIIDWGEQLQMVVLELIKKVCRNNKGEKGKYIKIIISLLSANSTAVVYECAGTLVSLSSAPTAIKAAANTYCQLLLSQSDNNVKLIVLDRLNELKRDNREIMVDMVMDVLRALSTPNHDIRRKTIDIALELITPKNIDQVVMMLKKEVVKTQSGEHEKNGEYRQMLVQAIHTCAIKFPEVASTVVHLLMDFLGDTNVASAMDVVVFVREIIETNPKLRVSIITRLLDTFYQIRAARVCSCALWIIGEYCLSLSEVESGIATIKQCLGDLPFYTISEDGEGQEPSKAVQQVNSTTVSSRRPAILADGTYATQSAALETAMSPPTLVQGSLSSIGNLRSLILSGDFFLGAVVACTLTKLILRLEEVQTSKVEVNKATSQSLLIMVSMLQLGQSSVLPHPIDNDSHDRVVLCIRLLCNTGDEIRKIWLESCRQSFVKMLADKQRRETEEIKAKAQISNAQPDDLIDFYHLKSRKGMSQLELEDEVQDDLKRATGEFTKDADDANKLNRILQLTGFSDPVYAEAYVTVHHYDIVLDVTVINRTKETLQNLCLELATMGDLKLVERPQNYTLAPESSKQIKANIKVSSTETGVIFGNIVYETSSNVLERTVIVLNDIHIDIMDYIAPASCADVAFRTMWAEFEWENKVAVNTVLQDEREFLGHIIKSTNMKCLTPPSALEGECGFLAANLYAKSVFGEDALVNVSIEKQSDGKLSGYIRIRSKTQGIALSLGDKITLKQKGTAQ