Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065549.t1 | XP_003617622.1 | 97.3 | 334 | 8 | 1 | 1 | 333 | 1 | 334 | 7.30E-161 | 576.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065549.t1 | Q9FFK1 | 65.2 | 339 | 109 | 4 | 1 | 333 | 1 | 336 | 3.4e-106 | 386.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065549.t1 | G7K8M8 | 97.3 | 334 | 8 | 1 | 1 | 333 | 1 | 334 | 5.2e-161 | 576.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene072972 | MS.gene065549 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065549.t1 | MTR_5g093600 | 98.503 | 334 | 4 | 1 | 1 | 333 | 1 | 334 | 0.0 | 677 |
| MS.gene065549.t1 | MTR_5g093600 | 98.855 | 262 | 3 | 0 | 72 | 333 | 7 | 268 | 0.0 | 538 |
| MS.gene065549.t1 | MTR_3g108160 | 50.765 | 327 | 135 | 4 | 3 | 317 | 8 | 320 | 2.32e-86 | 263 |
| MS.gene065549.t1 | MTR_3g108160 | 47.119 | 295 | 124 | 4 | 3 | 282 | 8 | 285 | 3.61e-63 | 202 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065549.t1 | AT5G05760 | 62.356 | 348 | 104 | 5 | 1 | 333 | 1 | 336 | 4.20e-144 | 410 |
| MS.gene065549.t1 | AT3G24350 | 47.191 | 356 | 147 | 7 | 3 | 333 | 8 | 347 | 1.31e-94 | 285 |
| MS.gene065549.t1 | AT3G24350 | 45.135 | 370 | 148 | 8 | 3 | 333 | 8 | 361 | 3.01e-90 | 274 |
Find 78 sgRNAs with CRISPR-Local
Find 347 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GACCTTGAATTCGGCTGTTT+TGG | 0.235052 | 5.1:-74648009 | MS.gene065549:CDS |
| AGCTCTTGAATTTCCATTAT+CGG | 0.283903 | 5.1:+74648059 | None:intergenic |
| GCCACCTATTTGATGATATT+CGG | 0.303455 | 5.1:+74642876 | None:intergenic |
| GATGATCTTCATATTCTTTG+TGG | 0.304733 | 5.1:-74642816 | MS.gene065549:CDS |
| CTGATGCTGTAAAGGGTTCT+TGG | 0.317200 | 5.1:+74646536 | None:intergenic |
| CCAGCTGGAATTCCATTTGA+TGG | 0.346670 | 5.1:+74645046 | None:intergenic |
| TCAACCGAATATCATCAAAT+AGG | 0.355079 | 5.1:-74642880 | MS.gene065549:CDS |
| AAATATTCAGAAGATTGATT+TGG | 0.359781 | 5.1:-74647979 | MS.gene065549:CDS |
| GAGGTAGACGGTTGTTGATT+CGG | 0.366301 | 5.1:+74648396 | None:intergenic |
| GTTGAATTCGGATCTTGAAT+AGG | 0.382249 | 5.1:+74648365 | None:intergenic |
| CCAGAGACATCTCCATTTGC+TGG | 0.382646 | 5.1:+74643311 | None:intergenic |
| TTGCTTACACTTTGCGAGCC+TGG | 0.393574 | 5.1:+74648290 | None:intergenic |
| TAGTGGAATCTTCACACATT+TGG | 0.400662 | 5.1:-74643203 | MS.gene065549:CDS |
| AAAGCATCACAAATCGGATT+AGG | 0.401879 | 5.1:-74648339 | MS.gene065549:CDS |
| TGATAGCTAGCTCTCCTTGA+TGG | 0.405749 | 5.1:+74643167 | None:intergenic |
| ATCAAGGAGAGCTAGCTATC+AGG | 0.408272 | 5.1:-74643165 | MS.gene065549:intron |
| GCTTTGGCTGATGCTGTAAA+GGG | 0.413358 | 5.1:+74646529 | None:intergenic |
| GGCTTTGGCTGATGCTGTAA+AGG | 0.414806 | 5.1:+74646528 | None:intergenic |
| ATCCAAAACAGCCGAATTCA+AGG | 0.417994 | 5.1:+74648007 | None:intergenic |
| TGATATAACGACCTTGAATT+CGG | 0.419068 | 5.1:-74648018 | MS.gene065549:CDS |
| AAGAAAATCGGCGGCGGAGG+CGG | 0.420834 | 5.1:-74648432 | MS.gene065549:CDS |
| GGTGGCTCAGTAGTTGGCTT+TGG | 0.425845 | 5.1:+74646513 | None:intergenic |
| AACATCTTGAAGATGCTTTG+TGG | 0.441755 | 5.1:+74647878 | None:intergenic |
| GGAGATGTCTCTGGTACAAC+AGG | 0.445501 | 5.1:-74643302 | MS.gene065549:CDS |
| CTCAAGAAAATCGGCGGCGG+AGG | 0.446694 | 5.1:-74648435 | MS.gene065549:CDS |
| GACATCTCCATTTGCTGGGA+TGG | 0.447518 | 5.1:+74643316 | None:intergenic |
| GAGTGTTTGCAACAAACATC+AGG | 0.447539 | 5.1:-74646456 | MS.gene065549:CDS |
| TTATGCAGATTACCATCAAA+TGG | 0.449421 | 5.1:-74645058 | MS.gene065549:intron |
| GATGTTTAATGATCCGATAA+TGG | 0.449546 | 5.1:-74648072 | MS.gene065549:CDS |
| AAACACTCCATCCCAGCAAA+TGG | 0.466839 | 5.1:-74643323 | MS.gene065549:CDS |
| TTTGTGATGACTTGAAGAAC+AGG | 0.477282 | 5.1:-74647911 | MS.gene065549:CDS |
| TGTGAAGATTCCACTAAGTT+CGG | 0.478325 | 5.1:+74643210 | None:intergenic |
| AACCGAAAAGCATCACAAAT+CGG | 0.480320 | 5.1:-74648345 | MS.gene065549:CDS |
| ACGGAGACTCTCAAGAAAAT+CGG | 0.486910 | 5.1:-74648444 | MS.gene065549:CDS |
| ATATCAAGGCTCATGAGAAT+AGG | 0.492598 | 5.1:-74646572 | MS.gene065549:CDS |
| CAAGGTGGTGGCTCAGTAGT+TGG | 0.500950 | 5.1:+74646507 | None:intergenic |
| CTTCACACATTTGGCTACAA+TGG | 0.501946 | 5.1:-74643194 | MS.gene065549:CDS |
| TGATGTTTGTTGCAAACACT+CGG | 0.514466 | 5.1:+74646458 | None:intergenic |
| TCTACTATTACCGAACTTAG+TGG | 0.515127 | 5.1:-74643220 | MS.gene065549:CDS |
| TTCCAGCTGGCAATCAGCTA+AGG | 0.515452 | 5.1:-74645033 | MS.gene065549:intron |
| GATAGCTAGCTCTCCTTGAT+GGG | 0.518110 | 5.1:+74643168 | None:intergenic |
| CCAGCAAATGGAGATGTCTC+TGG | 0.519496 | 5.1:-74643311 | MS.gene065549:CDS |
| AACCTTAGCTGATTGCCAGC+TGG | 0.520365 | 5.1:+74645031 | None:intergenic |
| GAGTCATTGGCAAATGTTGA+AGG | 0.525836 | 5.1:-74642929 | MS.gene065549:CDS |
| TGACAACATGGATGAGTCAT+TGG | 0.527110 | 5.1:-74642942 | MS.gene065549:CDS |
| GCTACAATGGTTGCCCATCA+AGG | 0.533000 | 5.1:-74643181 | MS.gene065549:CDS |
| GAGCTCACAGTTCTTTATTG+AGG | 0.540197 | 5.1:-74642907 | MS.gene065549:CDS |
| CAAGTCATCACAAACAGCAT+TGG | 0.543561 | 5.1:+74647920 | None:intergenic |
| AAACCTCTCAGAAAATCGCC+AGG | 0.543641 | 5.1:-74648308 | MS.gene065549:CDS |
| CCATCAAATGGAATTCCAGC+TGG | 0.557531 | 5.1:-74645046 | MS.gene065549:CDS |
| CGAAGACTATGCTCAAAGTC+GGG | 0.559268 | 5.1:-74643266 | MS.gene065549:CDS |
| TGAGAGTCTCCGTCAGTGAT+CGG | 0.564444 | 5.1:+74648454 | None:intergenic |
| TTGTTGATTCGGCGGTGCAG+TGG | 0.565773 | 5.1:+74648407 | None:intergenic |
| GTTGAATTAGACCAAGGTGG+TGG | 0.565872 | 5.1:+74646495 | None:intergenic |
| TCATGTACCCTAGAATATCA+AGG | 0.572302 | 5.1:-74646586 | MS.gene065549:intron |
| GACTTGAAGAACAGGCTCAT+GGG | 0.574098 | 5.1:-74647903 | MS.gene065549:CDS |
| CAGAGACATCTCCATTTGCT+GGG | 0.576744 | 5.1:+74643312 | None:intergenic |
| TGAGCATAGTCTTCGTGTCG+AGG | 0.583773 | 5.1:+74643274 | None:intergenic |
| ACGAAGACTATGCTCAAAGT+CGG | 0.589584 | 5.1:-74643267 | MS.gene065549:CDS |
| TGACTTGAAGAACAGGCTCA+TGG | 0.593589 | 5.1:-74647904 | MS.gene065549:CDS |
| TTTGGCTGATGAGAATTACT+CGG | 0.602135 | 5.1:-74647961 | MS.gene065549:CDS |
| ACCGAATATCATCAAATAGG+TGG | 0.609305 | 5.1:-74642877 | MS.gene065549:CDS |
| TAGGAACTTTGAGAGGTAGA+CGG | 0.622767 | 5.1:+74648384 | None:intergenic |
| GGAACTCCGACGTGCGATCG+CGG | 0.623758 | 5.1:+74648475 | None:intergenic |
| CAACTACTGAGCCACCACCT+TGG | 0.634514 | 5.1:-74646506 | MS.gene065549:CDS |
| TCTTGAATAGGAACTTTGAG+AGG | 0.637072 | 5.1:+74648377 | None:intergenic |
| GCATTTGTTGAATTAGACCA+AGG | 0.643162 | 5.1:+74646489 | None:intergenic |
| ACTCTCAAGAAAATCGGCGG+CGG | 0.646295 | 5.1:-74648438 | MS.gene065549:CDS |
| GGCAAGTGCTCTGCACAATG+TGG | 0.647784 | 5.1:-74643245 | MS.gene065549:CDS |
| AACTTACCGCGATCGCACGT+CGG | 0.649088 | 5.1:-74648481 | MS.gene065549:CDS |
| ATACAGACGAAGATTAGCTG+TGG | 0.656342 | 5.1:-74643347 | MS.gene065549:intron |
| GTCGGAGTTCCGATCACTGA+CGG | 0.667298 | 5.1:-74648463 | MS.gene065549:CDS |
| GTAGACGGTTGTTGATTCGG+CGG | 0.669491 | 5.1:+74648399 | None:intergenic |
| AGTGTTTGCAACAAACATCA+GGG | 0.678373 | 5.1:-74646455 | MS.gene065549:intron |
| GGGCAGGATTGATGACAACA+TGG | 0.692558 | 5.1:-74642954 | MS.gene065549:intron |
| GGCTGATGAGAATTACTCGG+AGG | 0.694225 | 5.1:-74647958 | MS.gene065549:CDS |
| GAGACTCTCAAGAAAATCGG+CGG | 0.704359 | 5.1:-74648441 | MS.gene065549:CDS |
| TTTGTTGAATTAGACCAAGG+TGG | 0.742937 | 5.1:+74646492 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTATATATAATAAATATAA+TGG | - | chr5.1:74646147-74646166 | MS.gene065549:intron | 0.0% |
| !! | ATATAAATAAATACAATGAA+AGG | + | chr5.1:74646134-74646153 | None:intergenic | 10.0% |
| !! | TTTGACATATAAAATAAATT+GGG | + | chr5.1:74644332-74644351 | None:intergenic | 10.0% |
| !!! | TAATTTTAATATCATGTTAA+AGG | - | chr5.1:74644872-74644891 | MS.gene065549:intron | 10.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | - | chr5.1:74644393-74644412 | MS.gene065549:intron | 100.0% |
| !! | AGATTTAATTCATAAATACA+CGG | + | chr5.1:74644608-74644627 | None:intergenic | 15.0% |
| !! | ATAGATTTAATTCATATACA+CGG | + | chr5.1:74644268-74644287 | None:intergenic | 15.0% |
| !! | ATTATTTGCATTAATTGAAT+GGG | - | chr5.1:74647679-74647698 | MS.gene065549:intron | 15.0% |
| !! | CAAAATAAGATATTAAAAAC+TGG | + | chr5.1:74647555-74647574 | None:intergenic | 15.0% |
| !! | GTTTGACATATAAAATAAAT+TGG | + | chr5.1:74644333-74644352 | None:intergenic | 15.0% |
| !! | TATTATTTGCATTAATTGAA+TGG | - | chr5.1:74647678-74647697 | MS.gene065549:intron | 15.0% |
| !! | TCTTATAAAAGTTTATCATT+AGG | - | chr5.1:74647807-74647826 | MS.gene065549:intron | 15.0% |
| !!! | AAATAAAGTATTTTTCTTTC+TGG | + | chr5.1:74645461-74645480 | None:intergenic | 15.0% |
| !!! | TAAAATTTTTAGTTATGCTT+AGG | - | chr5.1:74647866-74647885 | MS.gene065549:CDS | 15.0% |
| !!! | TGTATATTTTCTAACTTAAA+CGG | - | chr5.1:74647892-74647911 | MS.gene065549:CDS | 15.0% |
| !! | AAACATATAATCATGCTATA+TGG | + | chr5.1:74646346-74646365 | None:intergenic | 20.0% |
| !! | AAATATTCAGAAGATTGATT+TGG | - | chr5.1:74643321-74643340 | MS.gene065549:CDS | 20.0% |
| !! | AATGAATTATATATCATGTC+AGG | + | chr5.1:74645091-74645110 | None:intergenic | 20.0% |
| !! | ATGAATTATATATCATGTCA+GGG | + | chr5.1:74645090-74645109 | None:intergenic | 20.0% |
| !! | ATGTAAAATATCAAAACAAG+TGG | - | chr5.1:74646405-74646424 | MS.gene065549:intron | 20.0% |
| !! | ATTAAAGATTCATATTGTTG+CGG | - | chr5.1:74648183-74648202 | MS.gene065549:intron | 20.0% |
| !! | CATCAGAAAAAATATCAAAA+TGG | + | chr5.1:74648468-74648487 | None:intergenic | 20.0% |
| !! | CATTCACAATATAAATTACA+TGG | + | chr5.1:74644690-74644709 | None:intergenic | 20.0% |
| !! | GCATAAAACAATAATCTTTA+AGG | + | chr5.1:74646228-74646247 | None:intergenic | 20.0% |
| !! | TACTACATAATTAACATAAC+TGG | + | chr5.1:74647581-74647600 | None:intergenic | 20.0% |
| !! | TTTATTAGCGAAGTAAATTT+AGG | - | chr5.1:74647471-74647490 | MS.gene065549:intron | 20.0% |
| !! | TTTGTCATATCTGAATTATT+TGG | - | chr5.1:74647757-74647776 | MS.gene065549:intron | 20.0% |
| !!! | ATATATATCCTATGTTACTT+TGG | + | chr5.1:74643619-74643638 | None:intergenic | 20.0% |
| !!! | ATTTCTCTTTTTCTTATAAC+AGG | + | chr5.1:74646488-74646507 | None:intergenic | 20.0% |
| !!! | CAAACAATATTTTCAAATAG+CGG | - | chr5.1:74643757-74643776 | MS.gene065549:intron | 20.0% |
| !!! | TTAATTTGAAGAAAAATGAC+TGG | + | chr5.1:74647621-74647640 | None:intergenic | 20.0% |
| !!! | TTCTTTTATAAGACTATAAG+AGG | + | chr5.1:74644078-74644097 | None:intergenic | 20.0% |
| !!! | TTTTCTTTTCTCTCTTAATT+CGG | + | chr5.1:74643894-74643913 | None:intergenic | 20.0% |
| !!! | TTTTTTATTGTTTATTGCAG+TGG | - | chr5.1:74643192-74643211 | MS.gene065549:CDS | 20.0% |
| ! | AAAGAGTTCAAAAATACTGA+AGG | + | chr5.1:74647290-74647309 | None:intergenic | 25.0% |
| ! | AACTAAACAAGTAATAGTCT+TGG | - | chr5.1:74645501-74645520 | MS.gene065549:intron | 25.0% |
| ! | AACTATGTCATAGTTAATTC+TGG | + | chr5.1:74645992-74646011 | None:intergenic | 25.0% |
| ! | AAGAGTTCAAAAATACTGAA+GGG | + | chr5.1:74647289-74647308 | None:intergenic | 25.0% |
| ! | ACAAACTTCAAATTGAAGAA+CGG | + | chr5.1:74647742-74647761 | None:intergenic | 25.0% |
| ! | ACGTAAATTGTAATTTACTC+GGG | - | chr5.1:74648326-74648345 | MS.gene065549:CDS | 25.0% |
| ! | ACTATGTCATAGTTAATTCT+GGG | + | chr5.1:74645991-74646010 | None:intergenic | 25.0% |
| ! | ATATAGTGACCTTATAACAT+AGG | - | chr5.1:74643780-74643799 | MS.gene065549:intron | 25.0% |
| ! | ATGCTATATGGAAATGTAAA+GGG | + | chr5.1:74646334-74646353 | None:intergenic | 25.0% |
| ! | CAAAACAAAAATACAAGAGA+CGG | + | chr5.1:74647522-74647541 | None:intergenic | 25.0% |
| ! | CAAACATAATGAAAAAACAG+AGG | - | chr5.1:74646605-74646624 | MS.gene065549:intron | 25.0% |
| ! | GAAGTAAATTTAGGTCTATA+AGG | - | chr5.1:74647480-74647499 | MS.gene065549:intron | 25.0% |
| ! | GACGTAAATTGTAATTTACT+CGG | - | chr5.1:74648325-74648344 | MS.gene065549:CDS | 25.0% |
| ! | TATAGTGACCTTATAACATA+GGG | - | chr5.1:74643781-74643800 | MS.gene065549:intron | 25.0% |
| ! | TGAAACAATAAAGTTTAGCT+AGG | + | chr5.1:74645061-74645080 | None:intergenic | 25.0% |
| ! | TGAATTATATATCATGTCAG+GGG | + | chr5.1:74645089-74645108 | None:intergenic | 25.0% |
| ! | TTTAAGGAATTAAACTTCAG+AGG | + | chr5.1:74646212-74646231 | None:intergenic | 25.0% |
| !! | AAACTCCAAATTTTACTCTT+AGG | - | chr5.1:74646372-74646391 | MS.gene065549:intron | 25.0% |
| !! | AGAACTGTAAACTTTTTGAA+GGG | - | chr5.1:74645729-74645748 | MS.gene065549:intron | 25.0% |
| !! | AGATCTTTTATACAGAGTAT+AGG | + | chr5.1:74645649-74645668 | None:intergenic | 25.0% |
| !! | ATAATTCATTTTCTGACTCT+CGG | - | chr5.1:74645101-74645120 | MS.gene065549:intron | 25.0% |
| !! | CATATATGTTATGTGTTGAT+AGG | - | chr5.1:74645549-74645568 | MS.gene065549:intron | 25.0% |
| !! | TAGAACTGTAAACTTTTTGA+AGG | - | chr5.1:74645728-74645747 | MS.gene065549:intron | 25.0% |
| !! | TTTCTTTTCTCTCTTAATTC+GGG | + | chr5.1:74643893-74643912 | None:intergenic | 25.0% |
| !!! | AAGTTTACAGTTCTAAAGTT+TGG | + | chr5.1:74645723-74645742 | None:intergenic | 25.0% |
| !!! | AGTTTACAGTTCTAAAGTTT+GGG | + | chr5.1:74645722-74645741 | None:intergenic | 25.0% |
| !!! | GGACTAAATTTTTAAAGAGA+CGG | + | chr5.1:74646104-74646123 | None:intergenic | 25.0% |
| AAGAAGTAAATATCTGGAAG+GGG | + | chr5.1:74645779-74645798 | None:intergenic | 30.0% | |
| AATACAATGAAAGGATCTTC+AGG | + | chr5.1:74646125-74646144 | None:intergenic | 30.0% | |
| AATGACTCACAAATAATGCA+AGG | - | chr5.1:74645618-74645637 | MS.gene065549:intron | 30.0% | |
| ACAAGAAGTAAATATCTGGA+AGG | + | chr5.1:74645781-74645800 | None:intergenic | 30.0% | |
| AGCTCTTGAATTTCCATTAT+CGG | + | chr5.1:74643244-74643263 | None:intergenic | 30.0% | |
| ATAGTGACCTTATAACATAG+GGG | - | chr5.1:74643782-74643801 | MS.gene065549:intron | 30.0% | |
| ATAGTGCTATAGAGTTTGAT+AGG | + | chr5.1:74644140-74644159 | None:intergenic | 30.0% | |
| CAAGAAGTAAATATCTGGAA+GGG | + | chr5.1:74645780-74645799 | None:intergenic | 30.0% | |
| CAATACTCTTGTCATATGAT+AGG | - | chr5.1:74644995-74645014 | MS.gene065549:intron | 30.0% | |
| CATGCTATATGGAAATGTAA+AGG | + | chr5.1:74646335-74646354 | None:intergenic | 30.0% | |
| CCATAAAGAGAATATTCCAA+TGG | + | chr5.1:74644115-74644134 | None:intergenic | 30.0% | |
| CCATTGGAATATTCTCTTTA+TGG | - | chr5.1:74644112-74644131 | MS.gene065549:intron | 30.0% | |
| GAGAGAAAAGAAAATCAGTA+CGG | - | chr5.1:74643900-74643919 | MS.gene065549:intron | 30.0% | |
| GATGATCTTCATATTCTTTG+TGG | - | chr5.1:74648484-74648503 | MS.gene065549:CDS | 30.0% | |
| GATGTTTAATGATCCGATAA+TGG | - | chr5.1:74643228-74643247 | MS.gene065549:CDS | 30.0% | |
| GCGTCTTAAGTAATTTATGT+TGG | - | chr5.1:74646176-74646195 | MS.gene065549:intron | 30.0% | |
| GCTAACAAGAAGTAAATATC+TGG | + | chr5.1:74645785-74645804 | None:intergenic | 30.0% | |
| GTAAATTTGTCCATCAGTAA+TGG | - | chr5.1:74647315-74647334 | MS.gene065549:intron | 30.0% | |
| TAAAACTCCCCTATGTTATA+AGG | + | chr5.1:74643792-74643811 | None:intergenic | 30.0% | |
| TAAACCTCTACTATGTCATT+GGG | + | chr5.1:74645429-74645448 | None:intergenic | 30.0% | |
| TAGTCAGTTTGTATTAGACT+TGG | + | chr5.1:74645378-74645397 | None:intergenic | 30.0% | |
| TCAACCGAATATCATCAAAT+AGG | - | chr5.1:74648420-74648439 | MS.gene065549:CDS | 30.0% | |
| TCATTGAAAATAACTGACAC+CGG | + | chr5.1:74647352-74647371 | None:intergenic | 30.0% | |
| TCATTGATAAGATGATCCAA+AGG | + | chr5.1:74647438-74647457 | None:intergenic | 30.0% | |
| TGATATAACGACCTTGAATT+CGG | - | chr5.1:74643282-74643301 | MS.gene065549:CDS | 30.0% | |
| TGCTATATGGAAATGTAAAG+GGG | + | chr5.1:74646333-74646352 | None:intergenic | 30.0% | |
| TGCTATTGTTCTCTAATAGA+CGG | - | chr5.1:74643818-74643837 | MS.gene065549:intron | 30.0% | |
| TTAAACCTCTACTATGTCAT+TGG | + | chr5.1:74645430-74645449 | None:intergenic | 30.0% | |
| TTAGAGACCTATTCACAAAA+TGG | - | chr5.1:74646574-74646593 | MS.gene065549:CDS | 30.0% | |
| TTATGCAGATTACCATCAAA+TGG | - | chr5.1:74646242-74646261 | MS.gene065549:intron | 30.0% | |
| TTGAACGAGTGTAGAATAAA+TGG | - | chr5.1:74646923-74646942 | MS.gene065549:intron | 30.0% | |
| TTGTCAAATAGCAGATATAG+TGG | - | chr5.1:74644357-74644376 | MS.gene065549:intron | 30.0% | |
| ! | AATGAATATGATCTCTGAAG+AGG | + | chr5.1:74643136-74643155 | None:intergenic | 30.0% |
| ! | CGGAGTATTATTGATTGAAA+AGG | - | chr5.1:74643920-74643939 | MS.gene065549:intron | 30.0% |
| ! | TAATTCATTTTCTGACTCTC+GGG | - | chr5.1:74645102-74645121 | MS.gene065549:intron | 30.0% |
| !! | ATGTTTACTCTTCTGAAACT+TGG | - | chr5.1:74645669-74645688 | MS.gene065549:intron | 30.0% |
| !! | CGTCTCTTGTATTTTTGTTT+TGG | - | chr5.1:74647520-74647539 | MS.gene065549:intron | 30.0% |
| !! | GTTTATTCATGTTTTCGAGA+GGG | + | chr5.1:74647143-74647162 | None:intergenic | 30.0% |
| !! | TACAAAGTGTTGTCAAATAG+TGG | - | chr5.1:74643846-74643865 | MS.gene065549:intron | 30.0% |
| !! | TACAAAGTGTTGTTAAGTAG+TGG | - | chr5.1:74644474-74644493 | MS.gene065549:intron | 30.0% |
| !! | TGTTTATTCATGTTTTCGAG+AGG | + | chr5.1:74647144-74647163 | None:intergenic | 30.0% |
| !!! | GTTCATCTTTTTTTGCTGAT+GGG | + | chr5.1:74647071-74647090 | None:intergenic | 30.0% |
| !!! | TGTTCATCTTTTTTTGCTGA+TGG | + | chr5.1:74647072-74647091 | None:intergenic | 30.0% |
| !!! | TTCAAGATGTTTTGACTACT+AGG | - | chr5.1:74643434-74643453 | MS.gene065549:intron | 30.0% |
| AAATTGTAATTTACTCGGGC+AGG | - | chr5.1:74648330-74648349 | MS.gene065549:CDS | 35.0% | |
| AACAAGATAGACTTTAGCCT+CGG | - | chr5.1:74646997-74647016 | MS.gene065549:intron | 35.0% | |
| AACATCTTGAAGATGCTTTG+TGG | + | chr5.1:74643425-74643444 | None:intergenic | 35.0% | |
| AACTCAAATTCAACAGCTGA+AGG | - | chr5.1:74646970-74646989 | MS.gene065549:intron | 35.0% | |
| AAGAAAAATGACTGGCGTTA+TGG | + | chr5.1:74647613-74647632 | None:intergenic | 35.0% | |
| AAGACTATAAGAGGATGTGA+AGG | + | chr5.1:74644069-74644088 | None:intergenic | 35.0% | |
| AAGAGACGGTCCTAATATTT+AGG | + | chr5.1:74647508-74647527 | None:intergenic | 35.0% | |
| AAGTTTGCAATGAAGCCAAA+AGG | - | chr5.1:74647173-74647192 | MS.gene065549:intron | 35.0% | |
| ACAGCAAATTTACCACATGT+GGG | + | chr5.1:74647925-74647944 | None:intergenic | 35.0% | |
| ACCGAATATCATCAAATAGG+TGG | - | chr5.1:74648423-74648442 | MS.gene065549:CDS | 35.0% | |
| ACTCTTGTCATATGATAGGA+TGG | - | chr5.1:74644999-74645018 | MS.gene065549:intron | 35.0% | |
| AGAAAATCCTCTACCCTAAT+TGG | - | chr5.1:74646664-74646683 | MS.gene065549:intron | 35.0% | |
| AGATCACACCAAAGTAACAT+AGG | - | chr5.1:74643608-74643627 | MS.gene065549:intron | 35.0% | |
| AGGTTTCAACACATTAGAGT+TGG | + | chr5.1:74647217-74647236 | None:intergenic | 35.0% | |
| AGTGTTTGCAACAAACATCA+GGG | - | chr5.1:74644845-74644864 | MS.gene065549:intron | 35.0% | |
| ATAGTGGCACTATAGCATTT+GGG | - | chr5.1:74644373-74644392 | MS.gene065549:intron | 35.0% | |
| ATATCAAGGCTCATGAGAAT+AGG | - | chr5.1:74644728-74644747 | MS.gene065549:intron | 35.0% | |
| ATATGCTCTGCTTCTCTTAT+AGG | + | chr5.1:74645534-74645553 | None:intergenic | 35.0% | |
| CAAAACCAAACCATTACTGA+TGG | + | chr5.1:74647328-74647347 | None:intergenic | 35.0% | |
| CAACAAATATCTGACATCGT+TGG | - | chr5.1:74645902-74645921 | MS.gene065549:intron | 35.0% | |
| CAACGATGTCAGATATTTGT+TGG | + | chr5.1:74645904-74645923 | None:intergenic | 35.0% | |
| CAGGATATCAAAGCAATTTG+TGG | + | chr5.1:74647041-74647060 | None:intergenic | 35.0% | |
| CCACTTTCAAATGTTTGCAA+AGG | + | chr5.1:74644915-74644934 | None:intergenic | 35.0% | |
| CCTTTGCAAACATTTGAAAG+TGG | - | chr5.1:74644912-74644931 | MS.gene065549:intron | 35.0% | |
| CTTGAGAGAAAGTTAGTTAG+AGG | - | chr5.1:74645182-74645201 | MS.gene065549:intron | 35.0% | |
| CTTTGTACTAAACCGCATAT+CGG | + | chr5.1:74644461-74644480 | None:intergenic | 35.0% | |
| GAAAACTCCATTGATGAGTT+TGG | - | chr5.1:74645154-74645173 | MS.gene065549:intron | 35.0% | |
| GCAATCCTTGATTGACTATA+CGG | - | chr5.1:74644535-74644554 | MS.gene065549:intron | 35.0% | |
| GGTTTCAACACATTAGAGTT+GGG | + | chr5.1:74647216-74647235 | None:intergenic | 35.0% | |
| GTGTCCAAATGTTTGTGTTT+GGG | - | chr5.1:74643573-74643592 | MS.gene065549:intron | 35.0% | |
| GTTGAATTCGGATCTTGAAT+AGG | + | chr5.1:74642938-74642957 | None:intergenic | 35.0% | |
| TAGTGGAATCTTCACACATT+TGG | - | chr5.1:74648097-74648116 | MS.gene065549:intron | 35.0% | |
| TATAGTGGCACTATAGCATT+TGG | - | chr5.1:74644372-74644391 | MS.gene065549:intron | 35.0% | |
| TATGCTCTGCTTCTCTTATA+GGG | + | chr5.1:74645533-74645552 | None:intergenic | 35.0% | |
| TCAATTGTTCAATCTTGCGT+TGG | - | chr5.1:74645022-74645041 | MS.gene065549:intron | 35.0% | |
| TCAGAATCCTACTCAAATGA+GGG | - | chr5.1:74647240-74647259 | MS.gene065549:intron | 35.0% | |
| TCATGAGCCTTGATATTCTA+GGG | + | chr5.1:74644724-74644743 | None:intergenic | 35.0% | |
| TCATGTACCCTAGAATATCA+AGG | - | chr5.1:74644714-74644733 | MS.gene065549:intron | 35.0% | |
| TCTACTATTACCGAACTTAG+TGG | - | chr5.1:74648080-74648099 | MS.gene065549:CDS | 35.0% | |
| TCTCCTCTTAATGAAGATCT+TGG | - | chr5.1:74648219-74648238 | MS.gene065549:intron | 35.0% | |
| TCTTGAATAGGAACTTTGAG+AGG | + | chr5.1:74642926-74642945 | None:intergenic | 35.0% | |
| TGGCAGTAGAAAAGAATTTG+AGG | + | chr5.1:74645884-74645903 | None:intergenic | 35.0% | |
| TGTGAAGATTCCACTAAGTT+CGG | + | chr5.1:74648093-74648112 | None:intergenic | 35.0% | |
| TTCAGAATCCTACTCAAATG+AGG | - | chr5.1:74647239-74647258 | MS.gene065549:intron | 35.0% | |
| TTTGAGTAGGATTCTGAACT+AGG | + | chr5.1:74647237-74647256 | None:intergenic | 35.0% | |
| TTTGGCTGATGAGAATTACT+CGG | - | chr5.1:74643339-74643358 | MS.gene065549:CDS | 35.0% | |
| TTTGTCCATCAGTAATGGTT+TGG | - | chr5.1:74647320-74647339 | MS.gene065549:intron | 35.0% | |
| TTTGTGATGACTTGAAGAAC+AGG | - | chr5.1:74643389-74643408 | MS.gene065549:intron | 35.0% | |
| TTTGTTGAATTAGACCAAGG+TGG | + | chr5.1:74644811-74644830 | None:intergenic | 35.0% | |
| ! | AAAGCATCACAAATCGGATT+AGG | - | chr5.1:74642961-74642980 | MS.gene065549:intron | 35.0% |
| ! | AGCTTTTCCAAACTCATCAA+TGG | + | chr5.1:74645164-74645183 | None:intergenic | 35.0% |
| ! | CTATAAGGCGCCTAAATATT+AGG | - | chr5.1:74647495-74647514 | MS.gene065549:intron | 35.0% |
| ! | GCATTTGTTGAATTAGACCA+AGG | + | chr5.1:74644814-74644833 | None:intergenic | 35.0% |
| ! | GCCACCTATTTGATGATATT+CGG | + | chr5.1:74648427-74648446 | None:intergenic | 35.0% |
| ! | GCTAGCCTAAGAGTAAAATT+TGG | + | chr5.1:74646380-74646399 | None:intergenic | 35.0% |
| ! | TGATGCTTTTCGGTTGAATT+CGG | + | chr5.1:74642950-74642969 | None:intergenic | 35.0% |
| ! | TGATGTTTGTTGCAAACACT+CGG | + | chr5.1:74644845-74644864 | None:intergenic | 35.0% |
| ! | TTACTGTTTCTTGACTCCTT+TGG | - | chr5.1:74647419-74647438 | MS.gene065549:intron | 35.0% |
| ! | TTCGGAATCAGATGTTACTT+TGG | + | chr5.1:74646752-74646771 | None:intergenic | 35.0% |
| !! | AACCGAAAAGCATCACAAAT+CGG | - | chr5.1:74642955-74642974 | MS.gene065549:intron | 35.0% |
| !! | ATCCGATTTGTGATGCTTTT+CGG | + | chr5.1:74642960-74642979 | None:intergenic | 35.0% |
| !! | ATCGCTGTTTTCTATGATCT+TGG | - | chr5.1:74644181-74644200 | MS.gene065549:intron | 35.0% |
| !! | TCGCTGTTTTCTATGATCTT+GGG | - | chr5.1:74644182-74644201 | MS.gene065549:intron | 35.0% |
| !! | TCGGAATCAGATGTTACTTT+GGG | + | chr5.1:74646751-74646770 | None:intergenic | 35.0% |
| !!! | AGTAATGGTTTGGTTTTGTC+CGG | - | chr5.1:74647330-74647349 | MS.gene065549:intron | 35.0% |
| AATCGATCACACACATCCAT+TGG | - | chr5.1:74644096-74644115 | MS.gene065549:intron | 40.0% | |
| AATTGCTCAGCTAGAACCTT+AGG | + | chr5.1:74644024-74644043 | None:intergenic | 40.0% | |
| ACGAAGACTATGCTCAAAGT+CGG | - | chr5.1:74648033-74648052 | MS.gene065549:CDS | 40.0% | |
| ACGGAGACTCTCAAGAAAAT+CGG | - | chr5.1:74642856-74642875 | MS.gene065549:CDS | 40.0% | |
| ACTCAAAAGTTTGACGAGCA+TGG | + | chr5.1:74646804-74646823 | None:intergenic | 40.0% | |
| AGTTGTGGGGATTCAAATGA+GGG | + | chr5.1:74646714-74646733 | None:intergenic | 40.0% | |
| ATCCAAAACAGCCGAATTCA+AGG | + | chr5.1:74643296-74643315 | None:intergenic | 40.0% | |
| ATGTGTTATGCCGCATAAGT+AGG | - | chr5.1:74645963-74645982 | MS.gene065549:intron | 40.0% | |
| ATTCTGGGTTCCTACTTATG+CGG | + | chr5.1:74645976-74645995 | None:intergenic | 40.0% | |
| ATTGCTCAGCTAGAACCTTA+GGG | + | chr5.1:74644023-74644042 | None:intergenic | 40.0% | |
| ATTTACCACATGTGGGCATA+TGG | + | chr5.1:74647918-74647937 | None:intergenic | 40.0% | |
| CAAGTCATCACAAACAGCAT+TGG | + | chr5.1:74643383-74643402 | None:intergenic | 40.0% | |
| CAGAATCCTACTCAAATGAG+GGG | - | chr5.1:74647241-74647260 | MS.gene065549:intron | 40.0% | |
| CGTGTCCAAATGTTTGTGTT+TGG | - | chr5.1:74643572-74643591 | MS.gene065549:intron | 40.0% | |
| CTCAAAAGTTTGACGAGCAT+GGG | + | chr5.1:74646803-74646822 | None:intergenic | 40.0% | |
| CTCACAAATAATGCAAGGCT+AGG | - | chr5.1:74645623-74645642 | MS.gene065549:intron | 40.0% | |
| CTCATGAGCCTTGATATTCT+AGG | + | chr5.1:74644725-74644744 | None:intergenic | 40.0% | |
| CTGACCCAAACACAAACATT+TGG | + | chr5.1:74643580-74643599 | None:intergenic | 40.0% | |
| CTTCACACATTTGGCTACAA+TGG | - | chr5.1:74648106-74648125 | MS.gene065549:intron | 40.0% | |
| GAACTTTCTGAATGGAACAG+AGG | - | chr5.1:74646515-74646534 | MS.gene065549:CDS | 40.0% | |
| GACACGACAAACACATATAC+CGG | + | chr5.1:74643558-74643577 | None:intergenic | 40.0% | |
| GACAGCAAATTTACCACATG+TGG | + | chr5.1:74647926-74647945 | None:intergenic | 40.0% | |
| GACATCCGTATAGTCAATCA+AGG | + | chr5.1:74644543-74644562 | None:intergenic | 40.0% | |
| GACCTATTCACAAAATGGCA+AGG | - | chr5.1:74646579-74646598 | MS.gene065549:intron | 40.0% | |
| GAGCTCACAGTTCTTTATTG+AGG | - | chr5.1:74648393-74648412 | MS.gene065549:CDS | 40.0% | |
| GAGTCATTGGCAAATGTTGA+AGG | - | chr5.1:74648371-74648390 | MS.gene065549:CDS | 40.0% | |
| GAGTGTTTGCAACAAACATC+AGG | - | chr5.1:74644844-74644863 | MS.gene065549:intron | 40.0% | |
| GATTCAAATGAGGGAAAGAG+GGG | + | chr5.1:74646705-74646724 | None:intergenic | 40.0% | |
| GCACCAAGATCTTCATTAAG+AGG | + | chr5.1:74648225-74648244 | None:intergenic | 40.0% | |
| GGATTCAAATGAGGGAAAGA+GGG | + | chr5.1:74646706-74646725 | None:intergenic | 40.0% | |
| TAGTGGCACTATAGCATTTG+GGG | - | chr5.1:74644374-74644393 | MS.gene065549:intron | 40.0% | |
| TAGTTGTGGGGATTCAAATG+AGG | + | chr5.1:74646715-74646734 | None:intergenic | 40.0% | |
| TATGTCATTGGGTGAGTGTT+GGG | + | chr5.1:74645418-74645437 | None:intergenic | 40.0% | |
| TCAAAAATACTGAAGGGCAG+AGG | + | chr5.1:74647283-74647302 | None:intergenic | 40.0% | |
| TCAAAAGTTTGACGAGCATG+GGG | + | chr5.1:74646802-74646821 | None:intergenic | 40.0% | |
| TCATTTGTGCTCAGAGCTAT+GGG | + | chr5.1:74647115-74647134 | None:intergenic | 40.0% | |
| TGACAACATGGATGAGTCAT+TGG | - | chr5.1:74648358-74648377 | MS.gene065549:CDS | 40.0% | |
| TGCTATTGTTCTCCGATATG+CGG | - | chr5.1:74644446-74644465 | MS.gene065549:intron | 40.0% | |
| TGGCTTTCATCTGATTCTCA+TGG | - | chr5.1:74646425-74646444 | MS.gene065549:intron | 40.0% | |
| TTAGAGGAGAGAGAAAGAGA+GGG | - | chr5.1:74645198-74645217 | MS.gene065549:intron | 40.0% | |
| TTCATTTGTGCTCAGAGCTA+TGG | + | chr5.1:74647116-74647135 | None:intergenic | 40.0% | |
| ! | ATACAGACGAAGATTAGCTG+TGG | - | chr5.1:74647953-74647972 | MS.gene065549:CDS | 40.0% |
| ! | GCACCGATATTTCTGATAGA+GGG | - | chr5.1:74643490-74643509 | MS.gene065549:intron | 40.0% |
| ! | GCTTTTGGCATGACCAATTA+GGG | + | chr5.1:74646680-74646699 | None:intergenic | 40.0% |
| ! | TAGGAACTTTGAGAGGTAGA+CGG | + | chr5.1:74642919-74642938 | None:intergenic | 40.0% |
| ! | TCAGCACTGAACTTTCTGAA+TGG | - | chr5.1:74646507-74646526 | MS.gene065549:CDS | 40.0% |
| ! | TGAATGAGGAGGTTAGTTGT+GGG | + | chr5.1:74646728-74646747 | None:intergenic | 40.0% |
| !! | AGCACCGATATTTCTGATAG+AGG | - | chr5.1:74643489-74643508 | MS.gene065549:intron | 40.0% |
| !! | AGCTTTGCTCTAGGATTACA+GGG | + | chr5.1:74643967-74643986 | None:intergenic | 40.0% |
| !! | CGATTTTCTGAGAGGTTTCA+TGG | + | chr5.1:74642990-74643009 | None:intergenic | 40.0% |
| !! | GATGTTACTTTGGGTGAATG+AGG | + | chr5.1:74646742-74646761 | None:intergenic | 40.0% |
| !! | TGTCGCTTTCTAGTTCTACT+TGG | - | chr5.1:74644936-74644955 | MS.gene065549:intron | 40.0% |
| !! | TTTTTGAAGGGAATCACCCT+CGG | - | chr5.1:74645741-74645760 | MS.gene065549:intron | 40.0% |
| !!! | TGCCTTGCCATTTTGTGAAT+AGG | + | chr5.1:74646584-74646603 | None:intergenic | 40.0% |
| !!! | TGTTTTGACTACTAGGACAG+AGG | - | chr5.1:74643441-74643460 | MS.gene065549:intron | 40.0% |
| AAACACTCCATCCCAGCAAA+TGG | - | chr5.1:74647977-74647996 | MS.gene065549:CDS | 45.0% | |
| AAACCTCTCAGAAAATCGCC+AGG | - | chr5.1:74642992-74643011 | MS.gene065549:intron | 45.0% | |
| AAACCTGTGATTGTCGCATG+CGG | + | chr5.1:74645932-74645951 | None:intergenic | 45.0% | |
| AAATGACTGGCGTTATGGCA+AGG | + | chr5.1:74647608-74647627 | None:intergenic | 45.0% | |
| AGCAATCACACTTGTCTGTG+TGG | + | chr5.1:74643521-74643540 | None:intergenic | 45.0% | |
| AGTGGCACTATAGCATTTGG+GGG | - | chr5.1:74644375-74644394 | MS.gene065549:intron | 45.0% | |
| ATCAAGGAGAGCTAGCTATC+AGG | - | chr5.1:74648135-74648154 | MS.gene065549:intron | 45.0% | |
| CAGAGACATCTCCATTTGCT+GGG | + | chr5.1:74647991-74648010 | None:intergenic | 45.0% | |
| CATTTGTGCTCAGAGCTATG+GGG | + | chr5.1:74647114-74647133 | None:intergenic | 45.0% | |
| CCAGCTGGAATTCCATTTGA+TGG | + | chr5.1:74646257-74646276 | None:intergenic | 45.0% | |
| CCATCAAATGGAATTCCAGC+TGG | - | chr5.1:74646254-74646273 | MS.gene065549:intron | 45.0% | |
| CGAAGACTATGCTCAAAGTC+GGG | - | chr5.1:74648034-74648053 | MS.gene065549:CDS | 45.0% | |
| CGACAAACACATATACCGGA+CGG | + | chr5.1:74643554-74643573 | None:intergenic | 45.0% | |
| CTATAGACCTGCGAGTTTGA+TGG | - | chr5.1:74646897-74646916 | MS.gene065549:intron | 45.0% | |
| CTATGTCATTGGGTGAGTGT+TGG | + | chr5.1:74645419-74645438 | None:intergenic | 45.0% | |
| CTCACCCAATGACATAGTAG+AGG | - | chr5.1:74645422-74645441 | MS.gene065549:intron | 45.0% | |
| CTGATGCTGTAAAGGGTTCT+TGG | + | chr5.1:74644767-74644786 | None:intergenic | 45.0% | |
| GACTTGAAGAACAGGCTCAT+GGG | - | chr5.1:74643397-74643416 | MS.gene065549:intron | 45.0% | |
| GAGACTCTCAAGAAAATCGG+CGG | - | chr5.1:74642859-74642878 | MS.gene065549:CDS | 45.0% | |
| GCGCCCTCTATCAGAAATAT+CGG | + | chr5.1:74643496-74643515 | None:intergenic | 45.0% | |
| GCTTTGGCTGATGCTGTAAA+GGG | + | chr5.1:74644774-74644793 | None:intergenic | 45.0% | |
| GGGATTCAAATGAGGGAAAG+AGG | + | chr5.1:74646707-74646726 | None:intergenic | 45.0% | |
| GGTGTCTGTGTAGATGATGA+TGG | + | chr5.1:74643050-74643069 | None:intergenic | 45.0% | |
| GTTAGAGGAGAGAGAAAGAG+AGG | - | chr5.1:74645197-74645216 | MS.gene065549:intron | 45.0% | |
| GTTGAATTAGACCAAGGTGG+TGG | + | chr5.1:74644808-74644827 | None:intergenic | 45.0% | |
| TATGTGCCCCTCATTTGAGT+AGG | + | chr5.1:74647250-74647269 | None:intergenic | 45.0% | |
| TCAATTGCCATCAAACTCGC+AGG | + | chr5.1:74646907-74646926 | None:intergenic | 45.0% | |
| TCAGCTAGAACCTTAGGGTT+GGG | + | chr5.1:74644018-74644037 | None:intergenic | 45.0% | |
| TGACTTGAAGAACAGGCTCA+TGG | - | chr5.1:74643396-74643415 | MS.gene065549:intron | 45.0% | |
| ! | ATCCTAGAGCAAAGCTCTGA+AGG | - | chr5.1:74643971-74643990 | MS.gene065549:intron | 45.0% |
| ! | CATGCGACAATCACAGGTTT+TGG | - | chr5.1:74645932-74645951 | MS.gene065549:intron | 45.0% |
| ! | GAATGAGGAGGTTAGTTGTG+GGG | + | chr5.1:74646727-74646746 | None:intergenic | 45.0% |
| ! | GACCTTGAATTCGGCTGTTT+TGG | - | chr5.1:74643291-74643310 | MS.gene065549:CDS | 45.0% |
| ! | GAGGTAGACGGTTGTTGATT+CGG | + | chr5.1:74642907-74642926 | None:intergenic | 45.0% |
| ! | GATAGCTAGCTCTCCTTGAT+GGG | + | chr5.1:74648135-74648154 | None:intergenic | 45.0% |
| ! | GGCTTTTGGCATGACCAATT+AGG | + | chr5.1:74646681-74646700 | None:intergenic | 45.0% |
| ! | GTCAAAGTGCTATAACTCCG+AGG | + | chr5.1:74647017-74647036 | None:intergenic | 45.0% |
| ! | GTGAATGAGGAGGTTAGTTG+TGG | + | chr5.1:74646729-74646748 | None:intergenic | 45.0% |
| ! | GTTACTTTGGGTGAATGAGG+AGG | + | chr5.1:74646739-74646758 | None:intergenic | 45.0% |
| ! | TGATAGCTAGCTCTCCTTGA+TGG | + | chr5.1:74648136-74648155 | None:intergenic | 45.0% |
| !! | GAGCTTTGCTCTAGGATTAC+AGG | + | chr5.1:74643968-74643987 | None:intergenic | 45.0% |
| !! | GCTTTGCTCTAGGATTACAG+GGG | + | chr5.1:74643966-74643985 | None:intergenic | 45.0% |
| !! | TCCTAGAGCAAAGCTCTGAA+GGG | - | chr5.1:74643972-74643991 | MS.gene065549:intron | 45.0% |
| !! | TTTGCTGATGGGTTTGTGTC+AGG | + | chr5.1:74647060-74647079 | None:intergenic | 45.0% |
| !!! | TATTAATTGATTTTTATTTT+TGG | - | chr5.1:74643165-74643184 | MS.gene065549:intron | 5.0% |
| AAAGTTTGACGAGCATGGGG+AGG | + | chr5.1:74646799-74646818 | None:intergenic | 50.0% | |
| AACCTTAGCTGATTGCCAGC+TGG | + | chr5.1:74646272-74646291 | None:intergenic | 50.0% | |
| ACTCTCAAGAAAATCGGCGG+CGG | - | chr5.1:74642862-74642881 | MS.gene065549:CDS | 50.0% | |
| AGAGTTGGGTTCATTCGCCA+TGG | + | chr5.1:74647202-74647221 | None:intergenic | 50.0% | |
| AGGATGTGAAGGCAGAGAGA+GGG | + | chr5.1:74644058-74644077 | None:intergenic | 50.0% | |
| AGGGGATTCAAACGATACCG+AGG | + | chr5.1:74645761-74645780 | None:intergenic | 50.0% | |
| ATGAAGCCAAAAGGCCACCA+TGG | - | chr5.1:74647182-74647201 | MS.gene065549:intron | 50.0% | |
| CCAGAGACATCTCCATTTGC+TGG | + | chr5.1:74647992-74648011 | None:intergenic | 50.0% | |
| CCAGCAAATGGAGATGTCTC+TGG | - | chr5.1:74647989-74648008 | MS.gene065549:CDS | 50.0% | |
| CTCAGCTAGAACCTTAGGGT+TGG | + | chr5.1:74644019-74644038 | None:intergenic | 50.0% | |
| GAGCTTGTCAGTGTCGTGTT+CGG | + | chr5.1:74643071-74643090 | None:intergenic | 50.0% | |
| GCTACAATGGTTGCCCATCA+AGG | - | chr5.1:74648119-74648138 | MS.gene065549:intron | 50.0% | |
| GGAGATGTCTCTGGTACAAC+AGG | - | chr5.1:74647998-74648017 | MS.gene065549:CDS | 50.0% | |
| GGCATGACCAATTAGGGTAG+AGG | + | chr5.1:74646674-74646693 | None:intergenic | 50.0% | |
| GGCTGATGAGAATTACTCGG+AGG | - | chr5.1:74643342-74643361 | MS.gene065549:CDS | 50.0% | |
| GGCTTGGCTGGATCATCATT+CGG | + | chr5.1:74646770-74646789 | None:intergenic | 50.0% | |
| GGGGATTCAAACGATACCGA+GGG | + | chr5.1:74645760-74645779 | None:intergenic | 50.0% | |
| GTGGCACTATAGCATTTGGG+GGG | - | chr5.1:74644376-74644395 | MS.gene065549:intron | 50.0% | |
| GTGGCTATATCAGCGCTCAT+AGG | - | chr5.1:74643865-74643884 | MS.gene065549:intron | 50.0% | |
| TCAAATGAGGGAAAGAGGGG+AGG | + | chr5.1:74646702-74646721 | None:intergenic | 50.0% | |
| TCCCTTCAGAGCTTTGCTCT+AGG | + | chr5.1:74643976-74643995 | None:intergenic | 50.0% | |
| TCTTTCTCTGCCCAACCCTA+AGG | - | chr5.1:74644005-74644024 | MS.gene065549:intron | 50.0% | |
| TGAGAGTCTCCGTCAGTGAT+CGG | + | chr5.1:74642849-74642868 | None:intergenic | 50.0% | |
| TGAGCATAGTCTTCGTGTCG+AGG | + | chr5.1:74648029-74648048 | None:intergenic | 50.0% | |
| TGGCACTATAGCATTTGGGG+GGG | - | chr5.1:74644377-74644396 | MS.gene065549:intron | 50.0% | |
| TTCCAGCTGGCAATCAGCTA+AGG | - | chr5.1:74646267-74646286 | MS.gene065549:intron | 50.0% | |
| TTGCTTACACTTTGCGAGCC+TGG | + | chr5.1:74643013-74643032 | None:intergenic | 50.0% | |
| ! | GACATCTCCATTTGCTGGGA+TGG | + | chr5.1:74647987-74648006 | None:intergenic | 50.0% |
| ! | GAGCACTCGTAAGCTTGTTC+AGG | + | chr5.1:74647789-74647808 | None:intergenic | 50.0% |
| ! | GGCTTTGGCTGATGCTGTAA+AGG | + | chr5.1:74644775-74644794 | None:intergenic | 50.0% |
| ! | GGGCAGGATTGATGACAACA+TGG | - | chr5.1:74648346-74648365 | MS.gene065549:CDS | 50.0% |
| ! | TCTCAAGAGAGTGTGACAGC+TGG | - | chr5.1:74645283-74645302 | MS.gene065549:intron | 50.0% |
| !! | GTAGACGGTTGTTGATTCGG+CGG | + | chr5.1:74642904-74642923 | None:intergenic | 50.0% |
| !! | TTGCTGTAGAAGTGTCCGTC+CGG | - | chr5.1:74643536-74643555 | MS.gene065549:intron | 50.0% |
| AACGGCCATATGCCCACATG+TGG | - | chr5.1:74647910-74647929 | MS.gene065549:CDS | 55.0% | |
| AACTTACCGCGATCGCACGT+CGG | - | chr5.1:74642819-74642838 | MS.gene065549:CDS | 55.0% | |
| ACTATAGCATTTGGGGGGGG+GGG | - | chr5.1:74644381-74644400 | MS.gene065549:intron | 55.0% | |
| ACTGAAGGGCAGAGGACAGT+GGG | + | chr5.1:74647275-74647294 | None:intergenic | 55.0% | |
| ATGCCGCATGCGACAATCAC+AGG | - | chr5.1:74645926-74645945 | MS.gene065549:intron | 55.0% | |
| CAACTACTGAGCCACCACCT+TGG | - | chr5.1:74644794-74644813 | MS.gene065549:intron | 55.0% | |
| CACTATAGCATTTGGGGGGG+GGG | - | chr5.1:74644380-74644399 | MS.gene065549:intron | 55.0% | |
| GAGGATGTGAAGGCAGAGAG+AGG | + | chr5.1:74644059-74644078 | None:intergenic | 55.0% | |
| GCACTATAGCATTTGGGGGG+GGG | - | chr5.1:74644379-74644398 | MS.gene065549:intron | 55.0% | |
| GGCAAGTGCTCTGCACAATG+TGG | - | chr5.1:74648055-74648074 | MS.gene065549:CDS | 55.0% | |
| GGCACTATAGCATTTGGGGG+GGG | - | chr5.1:74644378-74644397 | MS.gene065549:intron | 55.0% | |
| GTCGGAGTTCCGATCACTGA+CGG | - | chr5.1:74642837-74642856 | MS.gene065549:CDS | 55.0% | |
| GTGCTCAGAGCTATGGGGTT+AGG | + | chr5.1:74647109-74647128 | None:intergenic | 55.0% | |
| GTTGGGTTCATTCGCCATGG+TGG | + | chr5.1:74647199-74647218 | None:intergenic | 55.0% | |
| TACTGAAGGGCAGAGGACAG+TGG | + | chr5.1:74647276-74647295 | None:intergenic | 55.0% | |
| TTTGACGAGCATGGGGAGGA+GGG | + | chr5.1:74646795-74646814 | None:intergenic | 55.0% | |
| ! | AGGGAAAGAGGGGAGGCTTT+TGG | + | chr5.1:74646695-74646714 | None:intergenic | 55.0% |
| ! | CAAGGTGGTGGCTCAGTAGT+TGG | + | chr5.1:74644796-74644815 | None:intergenic | 55.0% |
| ! | CATTCGCCATGGTGGCCTTT+TGG | + | chr5.1:74647191-74647210 | None:intergenic | 55.0% |
| ! | GAGCCTGGCGATTTTCTGAG+AGG | + | chr5.1:74642998-74643017 | None:intergenic | 55.0% |
| ! | GGTGGCTCAGTAGTTGGCTT+TGG | + | chr5.1:74644790-74644809 | None:intergenic | 55.0% |
| !! | TTGTTGATTCGGCGGTGCAG+TGG | + | chr5.1:74642896-74642915 | None:intergenic | 55.0% |
| AAGAAAATCGGCGGCGGAGG+CGG | - | chr5.1:74642868-74642887 | MS.gene065549:CDS | 60.0% | |
| CTATAGCATTTGGGGGGGGG+GGG | - | chr5.1:74644382-74644401 | MS.gene065549:intron | 60.0% | |
| CTCAAGAAAATCGGCGGCGG+AGG | - | chr5.1:74642865-74642884 | MS.gene065549:CDS | 60.0% | |
| GTTTGACGAGCATGGGGAGG+AGG | + | chr5.1:74646796-74646815 | None:intergenic | 60.0% | |
| TATAGCATTTGGGGGGGGGG+GGG | - | chr5.1:74644383-74644402 | MS.gene065549:intron | 60.0% | |
| ACGAGCATGGGGAGGAGGGT+TGG | + | chr5.1:74646791-74646810 | None:intergenic | 65.0% | |
| ATAGCATTTGGGGGGGGGGG+GGG | - | chr5.1:74644384-74644403 | MS.gene065549:intron | 65.0% | |
| GGAACTCCGACGTGCGATCG+CGG | + | chr5.1:74642828-74642847 | None:intergenic | 65.0% | |
| !! | CATGGGGAGGAGGGTTGGCT+TGG | + | chr5.1:74646786-74646805 | None:intergenic | 65.0% |
| TAGCATTTGGGGGGGGGGGG+GGG | - | chr5.1:74644385-74644404 | MS.gene065549:intron | 70.0% | |
| !! | GGGAGGAGGGTTGGCTTGGC+TGG | + | chr5.1:74646782-74646801 | None:intergenic | 70.0% |
| AGCATTTGGGGGGGGGGGGG+GGG | - | chr5.1:74644386-74644405 | MS.gene065549:intron | 75.0% | |
| ! | ATTTGGGGGGGGGGGGGGGG+GGG | - | chr5.1:74644389-74644408 | MS.gene065549:intron | 80.0% |
| ! | CATTTGGGGGGGGGGGGGGG+GGG | - | chr5.1:74644388-74644407 | MS.gene065549:intron | 80.0% |
| ! | GCATTTGGGGGGGGGGGGGG+GGG | - | chr5.1:74644387-74644406 | MS.gene065549:intron | 80.0% |
| ! | GGGGGGGGGGGGGGGGGTTT+GGG | - | chr5.1:74644412-74644431 | MS.gene065549:intron | 85.0% |
| ! | GGGGGGGGGGGGGGGGTTTG+GGG | - | chr5.1:74644413-74644432 | MS.gene065549:intron | 85.0% |
| ! | TTTGGGGGGGGGGGGGGGGG+GGG | - | chr5.1:74644390-74644409 | MS.gene065549:intron | 85.0% |
| ! | GGGGGGGGGGGGGGGGGGTT+TGG | - | chr5.1:74644411-74644430 | MS.gene065549:intron | 90.0% |
| ! | TTGGGGGGGGGGGGGGGGGG+GGG | - | chr5.1:74644391-74644410 | MS.gene065549:intron | 90.0% |
| ! | TGGGGGGGGGGGGGGGGGGG+GGG | - | chr5.1:74644392-74644411 | MS.gene065549:intron | 95.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 74642811 | 74648511 | 74642811 | ID=MS.gene065549 |
| chr5.1 | mRNA | 74642811 | 74648511 | 74642811 | ID=MS.gene065549.t1;Parent=MS.gene065549 |
| chr5.1 | exon | 74648298 | 74648511 | 74648298 | ID=MS.gene065549.t1.exon1;Parent=MS.gene065549.t1 |
| chr5.1 | CDS | 74648298 | 74648511 | 74648298 | ID=cds.MS.gene065549.t1;Parent=MS.gene065549.t1 |
| chr5.1 | exon | 74647860 | 74648110 | 74647860 | ID=MS.gene065549.t1.exon2;Parent=MS.gene065549.t1 |
| chr5.1 | CDS | 74647860 | 74648110 | 74647860 | ID=cds.MS.gene065549.t1;Parent=MS.gene065549.t1 |
| chr5.1 | exon | 74646456 | 74646595 | 74646456 | ID=MS.gene065549.t1.exon3;Parent=MS.gene065549.t1 |
| chr5.1 | CDS | 74646456 | 74646595 | 74646456 | ID=cds.MS.gene065549.t1;Parent=MS.gene065549.t1 |
| chr5.1 | exon | 74645034 | 74645072 | 74645034 | ID=MS.gene065549.t1.exon4;Parent=MS.gene065549.t1 |
| chr5.1 | CDS | 74645034 | 74645072 | 74645034 | ID=cds.MS.gene065549.t1;Parent=MS.gene065549.t1 |
| chr5.1 | exon | 74643166 | 74643363 | 74643166 | ID=MS.gene065549.t1.exon5;Parent=MS.gene065549.t1 |
| chr5.1 | CDS | 74643166 | 74643363 | 74643166 | ID=cds.MS.gene065549.t1;Parent=MS.gene065549.t1 |
| chr5.1 | exon | 74642811 | 74642970 | 74642811 | ID=MS.gene065549.t1.exon6;Parent=MS.gene065549.t1 |
| chr5.1 | CDS | 74642811 | 74642970 | 74642811 | ID=cds.MS.gene065549.t1;Parent=MS.gene065549.t1 |
| Gene Sequence |
| Protein sequence |
