Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072972.t1 | XP_003603483.1 | 93.8 | 323 | 18 | 1 | 1 | 323 | 1 | 321 | 1.70E-138 | 502.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072972.t1 | Q9LK09 | 59.2 | 341 | 112 | 5 | 1 | 323 | 1 | 332 | 3.1e-83 | 310.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072972.t1 | G7JBR8 | 93.8 | 323 | 18 | 1 | 1 | 323 | 1 | 321 | 1.3e-138 | 502.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene23902 | MS.gene072972 | PPI |
| MS.gene072972 | MS.gene22643 | PPI |
| MS.gene072972 | MS.gene53088 | PPI |
| MS.gene072972 | MS.gene22645 | PPI |
| MS.gene072972 | MS.gene016966 | PPI |
| MS.gene55293 | MS.gene072972 | PPI |
| MS.gene28747 | MS.gene072972 | PPI |
| MS.gene072972 | MS.gene062285 | PPI |
| MS.gene072972 | MS.gene017190 | PPI |
| MS.gene038424 | MS.gene072972 | PPI |
| MS.gene45857 | MS.gene072972 | PPI |
| MS.gene35079 | MS.gene072972 | PPI |
| MS.gene072972 | MS.gene63797 | PPI |
| MS.gene48256 | MS.gene072972 | PPI |
| MS.gene072972 | MS.gene50365 | PPI |
| MS.gene072972 | MS.gene059227 | PPI |
| MS.gene072972 | MS.gene065549 | PPI |
| MS.gene072972 | MS.gene73502 | PPI |
| MS.gene90588 | MS.gene072972 | PPI |
| MS.gene051072 | MS.gene072972 | PPI |
| MS.gene072972 | MS.gene82750 | PPI |
| MS.gene072972 | MS.gene36417 | PPI |
| MS.gene072972 | MS.gene065513 | PPI |
| MS.gene072972 | MS.gene70862 | PPI |
| MS.gene47655 | MS.gene072972 | PPI |
| MS.gene072972 | MS.gene027060 | PPI |
| MS.gene072972 | MS.gene48916 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072972.t1 | MTR_3g108160 | 96.285 | 323 | 10 | 1 | 1 | 323 | 1 | 321 | 0.0 | 618 |
| MS.gene072972.t1 | MTR_3g108160 | 97.561 | 287 | 5 | 1 | 1 | 287 | 1 | 285 | 0.0 | 559 |
| MS.gene072972.t1 | MTR_5g093600 | 49.695 | 328 | 142 | 4 | 8 | 323 | 3 | 319 | 1.55e-93 | 281 |
| MS.gene072972.t1 | MTR_5g093600 | 50.607 | 247 | 110 | 3 | 89 | 323 | 7 | 253 | 1.32e-69 | 218 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072972.t1 | AT3G24350 | 63.450 | 342 | 96 | 8 | 1 | 323 | 1 | 332 | 6.98e-132 | 380 |
| MS.gene072972.t1 | AT3G24350 | 60.674 | 356 | 97 | 9 | 1 | 323 | 1 | 346 | 2.01e-127 | 369 |
| MS.gene072972.t1 | AT5G05760 | 47.198 | 339 | 136 | 9 | 8 | 323 | 3 | 321 | 1.06e-82 | 254 |
Find 68 sgRNAs with CRISPR-Local
Find 305 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTGAATTCCATAACCGATTT+TGG | 0.158089 | 3.4:+93951681 | None:intergenic |
| AAGAACATCTTTGAATTCTT+TGG | 0.263040 | 3.4:+93951317 | None:intergenic |
| TGAATAGCATATCATCTAAT+AGG | 0.340273 | 3.4:-93948133 | MS.gene072972:intron |
| GCGCTAGTGGTGGCTCCGTT+TGG | 0.368500 | 3.4:+93951790 | None:intergenic |
| TGGAAAGTTTCTGAGAAGTT+TGG | 0.372380 | 3.4:+93951659 | None:intergenic |
| AATTCTTGAATCTCCATTGT+TGG | 0.377567 | 3.4:+93951501 | None:intergenic |
| TTATGGCAACCTCCCCTTGC+TGG | 0.380812 | 3.4:+93950137 | None:intergenic |
| AATCGAAGAGCTTCCAAAAT+CGG | 0.381103 | 3.4:-93951694 | MS.gene072972:CDS |
| CCACTAGCCCATGGAGGTGC+AGG | 0.392951 | 3.4:+93951071 | None:intergenic |
| TGCTCATCAATCGCGTCTTT+AGG | 0.396903 | 3.4:+93951343 | None:intergenic |
| TTGAAGAAATCAGTTTCATC+TGG | 0.402299 | 3.4:-93951820 | MS.gene072972:CDS |
| TGCGCTTAACTCCGCGGTTG+TGG | 0.410355 | 3.4:-93951451 | MS.gene072972:CDS |
| CCTGCACCTCCATGGGCTAG+TGG | 0.415756 | 3.4:-93951071 | MS.gene072972:CDS |
| AGAGCTTCCAAAATCGGTTA+TGG | 0.421078 | 3.4:-93951688 | MS.gene072972:CDS |
| CTAGTGCCCCTGCACCTCCA+TGG | 0.421904 | 3.4:-93951079 | MS.gene072972:CDS |
| AGGATACACACCATTCTTAC+TGG | 0.424845 | 3.4:-93948015 | MS.gene072972:CDS |
| GCAGCAGGTAGTTCCATTGC+AGG | 0.439254 | 3.4:-93950257 | MS.gene072972:CDS |
| GAGATTACATTTGGCGAGCT+TGG | 0.452819 | 3.4:+93951639 | None:intergenic |
| GGATCGAGGATCGTCGGATC+TGG | 0.463408 | 3.4:+93951741 | None:intergenic |
| CTGCACCTCCATGGGCTAGT+GGG | 0.490575 | 3.4:-93951070 | MS.gene072972:intron |
| TAGTGCCCCTGCACCTCCAT+GGG | 0.492305 | 3.4:-93951078 | MS.gene072972:CDS |
| GAAGAAGCGGAAGAGGAAGA+AGG | 0.503293 | 3.4:+93951766 | None:intergenic |
| TGCAGAATCCTTAGAAGCGT+TGG | 0.504155 | 3.4:+93951154 | None:intergenic |
| GTTGCTGAGCTCATGAATAG+TGG | 0.508061 | 3.4:+93950189 | None:intergenic |
| TCTGGAAGAAGAAGCGGAAG+AGG | 0.510553 | 3.4:+93951759 | None:intergenic |
| TATGGCAACCTCCCCTTGCT+GGG | 0.510752 | 3.4:+93950138 | None:intergenic |
| CACTAGCCCATGGAGGTGCA+GGG | 0.517217 | 3.4:+93951072 | None:intergenic |
| TTCCACATTCCACAGGAAGC+AGG | 0.529508 | 3.4:-93950323 | MS.gene072972:intron |
| GGGCTTATCACCAGTAAGAA+TGG | 0.531813 | 3.4:+93948005 | None:intergenic |
| AGCAAGGGGAGGTTGCCATA+AGG | 0.533358 | 3.4:-93950135 | MS.gene072972:intron |
| GGAAGCTCTTCGATTGAACT+CGG | 0.534430 | 3.4:+93951702 | None:intergenic |
| GCAACACTTGTCTCCCAGCA+AGG | 0.536194 | 3.4:-93950151 | MS.gene072972:CDS |
| TTCCACAGGAAGCAGGTGGA+TGG | 0.547489 | 3.4:-93950316 | MS.gene072972:intron |
| AAGAATGGTGTGTATCCTCC+TGG | 0.557646 | 3.4:+93948020 | None:intergenic |
| CAACACTTGTCTCCCAGCAA+GGG | 0.565688 | 3.4:-93950150 | MS.gene072972:CDS |
| TGCATGTAACTGTCCTGCAA+TGG | 0.566350 | 3.4:+93950244 | None:intergenic |
| AGAGGAAGAAGGAGCGCTAG+TGG | 0.566979 | 3.4:+93951777 | None:intergenic |
| GATACATTGGCAAATGTAGA+GGG | 0.571542 | 3.4:-93948182 | MS.gene072972:CDS |
| TGAATTGCAACGGCGGATCG+AGG | 0.573650 | 3.4:+93951727 | None:intergenic |
| TTCCAGAGACAAAATTTACC+AGG | 0.576345 | 3.4:-93948038 | MS.gene072972:CDS |
| AAACAATACCTCAGTTCGCA+TGG | 0.585955 | 3.4:+93951293 | None:intergenic |
| TCATCTGGATCAGCTCCAAA+CGG | 0.588128 | 3.4:-93951805 | MS.gene072972:CDS |
| TGATACATTGGCAAATGTAG+AGG | 0.592255 | 3.4:-93948183 | MS.gene072972:CDS |
| AACGGACGTTGACGTATGAA+AGG | 0.600033 | 3.4:+93951128 | None:intergenic |
| GTCGGATCTGGAAGAAGAAG+CGG | 0.602586 | 3.4:+93951753 | None:intergenic |
| TTTCTTCAATCTCTCCGCAA+CGG | 0.605133 | 3.4:+93951834 | None:intergenic |
| CACATTCCACAGGAAGCAGG+TGG | 0.613533 | 3.4:-93950320 | MS.gene072972:intron |
| TGAGAACATGGATGATACAT+TGG | 0.615208 | 3.4:-93948195 | MS.gene072972:CDS |
| AGTAATTCTAGAAATGAGAG+TGG | 0.617720 | 3.4:-93951414 | MS.gene072972:CDS |
| CTCGGATTGAATTGCAACGG+CGG | 0.618007 | 3.4:+93951720 | None:intergenic |
| GCAGCTGTCTTTGTAGCTAA+CGG | 0.619481 | 3.4:+93951110 | None:intergenic |
| ATAACTTACCCACTAGCCCA+TGG | 0.621173 | 3.4:+93951062 | None:intergenic |
| GGAAGAAGGAGCGCTAGTGG+TGG | 0.623030 | 3.4:+93951780 | None:intergenic |
| AACGGCGGATCGAGGATCGT+CGG | 0.624441 | 3.4:+93951735 | None:intergenic |
| TTGCAGGATTGATGAGAACA+TGG | 0.626143 | 3.4:-93948207 | MS.gene072972:intron |
| AGTTGAATGACTAGTAGTGT+CGG | 0.627222 | 3.4:+93951380 | None:intergenic |
| ACTAGCCCATGGAGGTGCAG+GGG | 0.628852 | 3.4:+93951073 | None:intergenic |
| AACACTTGTCTCCCAGCAAG+GGG | 0.629440 | 3.4:-93950149 | MS.gene072972:CDS |
| TATTACTGCGCTTAACTCCG+CGG | 0.632841 | 3.4:-93951457 | MS.gene072972:CDS |
| ACATGAATTTCACACCGTTG+CGG | 0.637267 | 3.4:-93951848 | MS.gene072972:CDS |
| TACATTGGCAAATGTAGAGG+GGG | 0.641606 | 3.4:-93948180 | MS.gene072972:CDS |
| GAACTCGGATTGAATTGCAA+CGG | 0.646952 | 3.4:+93951717 | None:intergenic |
| TGTTCTTACCATGCGAACTG+AGG | 0.654249 | 3.4:-93951301 | MS.gene072972:intron |
| ACTTGTCTCCCAGCAAGGGG+AGG | 0.655536 | 3.4:-93950146 | MS.gene072972:CDS |
| CAGAGACAAAATTTACCAGG+AGG | 0.685332 | 3.4:-93948035 | MS.gene072972:CDS |
| ATACATTGGCAAATGTAGAG+GGG | 0.688787 | 3.4:-93948181 | MS.gene072972:CDS |
| ACTTACCCACTAGCCCATGG+AGG | 0.770983 | 3.4:+93951065 | None:intergenic |
| TAATTGAAGATCCACAACCG+CGG | 0.784239 | 3.4:+93951440 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTTGCTTAATTTAATTTA+TGG | - | chr3.4:93949262-93949281 | MS.gene072972:intron | 10.0% |
| !! | CAAATTAATTAACTCATTAA+AGG | + | chr3.4:93949248-93949267 | None:intergenic | 15.0% |
| !! | CACTACAAAAAAAAAAAAAA+AGG | + | chr3.4:93948353-93948372 | None:intergenic | 15.0% |
| !! | CATTTATAACTACAAAAATT+TGG | - | chr3.4:93951559-93951578 | MS.gene072972:intron | 15.0% |
| !! | TATAAAAGGAAATATTATCT+TGG | + | chr3.4:93951140-93951159 | None:intergenic | 15.0% |
| !! | TCTTACAATAATATACATTT+GGG | + | chr3.4:93949036-93949055 | None:intergenic | 15.0% |
| !!! | AAACTTTTATATTACTTGAT+GGG | - | chr3.4:93950996-93951015 | MS.gene072972:intron | 15.0% |
| !!! | CTTTTTTTTTTTTTTTGTAG+TGG | - | chr3.4:93948351-93948370 | MS.gene072972:intron | 15.0% |
| !!! | GATTAATTTGCATATTTATT+CGG | + | chr3.4:93949067-93949086 | None:intergenic | 15.0% |
| !!! | TAAACTTTTATATTACTTGA+TGG | - | chr3.4:93950995-93951014 | MS.gene072972:intron | 15.0% |
| !!! | TATTTATTTTGTTTTTTCCA+CGG | - | chr3.4:93949553-93949572 | MS.gene072972:intron | 15.0% |
| !! | AATGAAATTGAGATTACATT+TGG | + | chr3.4:93948274-93948293 | None:intergenic | 20.0% |
| !! | AATGGTAAAAAGTTAGATAA+TGG | - | chr3.4:93951300-93951319 | MS.gene072972:intron | 20.0% |
| !! | ACATGAAAAATTGAATTGAA+GGG | + | chr3.4:93948297-93948316 | None:intergenic | 20.0% |
| !! | ATTAATTGGTACACTATTAT+GGG | - | chr3.4:93950039-93950058 | MS.gene072972:intron | 20.0% |
| !! | CATAATATTAACACAACAAA+GGG | + | chr3.4:93949195-93949214 | None:intergenic | 20.0% |
| !! | GTCTTACAATAATATACATT+TGG | + | chr3.4:93949037-93949056 | None:intergenic | 20.0% |
| !! | TACATGAAAAATTGAATTGA+AGG | + | chr3.4:93948298-93948317 | None:intergenic | 20.0% |
| !! | TATTAATTGGTACACTATTA+TGG | - | chr3.4:93950038-93950057 | MS.gene072972:intron | 20.0% |
| !! | TCATAATATTAACACAACAA+AGG | + | chr3.4:93949196-93949215 | None:intergenic | 20.0% |
| !!! | ACTTGTTAAGGAATTATAAA+AGG | + | chr3.4:93951154-93951173 | None:intergenic | 20.0% |
| !!! | AGATTATAATTTGTTGTGAA+AGG | - | chr3.4:93950064-93950083 | MS.gene072972:intron | 20.0% |
| !!! | AGTTAGATAATGGAATTTAT+TGG | - | chr3.4:93951310-93951329 | MS.gene072972:CDS | 20.0% |
| !!! | ATAGATCTATTTCTAGAAAT+AGG | + | chr3.4:93950339-93950358 | None:intergenic | 20.0% |
| !!! | ATTATAATTTGTTGTGAAAG+GGG | - | chr3.4:93950066-93950085 | MS.gene072972:intron | 20.0% |
| !!! | GATTATAATTTGTTGTGAAA+GGG | - | chr3.4:93950065-93950084 | MS.gene072972:intron | 20.0% |
| !!! | TAGATCTATTTCTAGAAATA+GGG | + | chr3.4:93950338-93950357 | None:intergenic | 20.0% |
| !!! | TCAAATTTTAAGGAAAATTG+AGG | + | chr3.4:93950785-93950804 | None:intergenic | 20.0% |
| !!! | TGAAATTAGGTTTTTTCATT+GGG | + | chr3.4:93950174-93950193 | None:intergenic | 20.0% |
| ! | AAGAACATCTTTGAATTCTT+TGG | + | chr3.4:93948587-93948606 | None:intergenic | 25.0% |
| ! | AAGCTATCTTATTAATGAGA+TGG | + | chr3.4:93951259-93951278 | None:intergenic | 25.0% |
| ! | AATACAAATAGTCCAAACAA+AGG | - | chr3.4:93950122-93950141 | MS.gene072972:intron | 25.0% |
| ! | AATACAATCAACATACGAAA+AGG | + | chr3.4:93948868-93948887 | None:intergenic | 25.0% |
| ! | AGTAAGTTCGTATGTAATAA+AGG | + | chr3.4:93949820-93949839 | None:intergenic | 25.0% |
| ! | AGTATGTTAGATTATCTCAT+AGG | + | chr3.4:93949130-93949149 | None:intergenic | 25.0% |
| ! | CAAAAAATAAGAAAACCATG+AGG | + | chr3.4:93951832-93951851 | None:intergenic | 25.0% |
| ! | CATTAATAAGATAGCTTACA+TGG | - | chr3.4:93951262-93951281 | MS.gene072972:intron | 25.0% |
| ! | TATATGTTGTATTGCTCATA+AGG | - | chr3.4:93951594-93951613 | MS.gene072972:intron | 25.0% |
| ! | TGAATAGCATATCATCTAAT+AGG | - | chr3.4:93951768-93951787 | MS.gene072972:CDS | 25.0% |
| ! | TTCTAATCTGACATTGTATA+AGG | - | chr3.4:93950882-93950901 | MS.gene072972:intron | 25.0% |
| ! | TTTGCATATTTATTCGGATT+TGG | + | chr3.4:93949061-93949080 | None:intergenic | 25.0% |
| !! | ATGTTGATTGTATTGTTAGA+GGG | - | chr3.4:93948874-93948893 | MS.gene072972:intron | 25.0% |
| !! | CCTTAAAATTTGAGATGTTA+GGG | - | chr3.4:93950792-93950811 | MS.gene072972:intron | 25.0% |
| !! | CTTAAAATTTGAGATGTTAG+GGG | - | chr3.4:93950793-93950812 | MS.gene072972:intron | 25.0% |
| !! | GAATAGAAGACAATTGTTTT+CGG | - | chr3.4:93948724-93948743 | MS.gene072972:intron | 25.0% |
| !! | TATGTTGATTGTATTGTTAG+AGG | - | chr3.4:93948873-93948892 | MS.gene072972:intron | 25.0% |
| !! | TCCTTAAAATTTGAGATGTT+AGG | - | chr3.4:93950791-93950810 | MS.gene072972:intron | 25.0% |
| !! | TTAAGGAAAATTGAGGTTTT+TGG | + | chr3.4:93950778-93950797 | None:intergenic | 25.0% |
| !!! | ATTTTAATTTGTTTCTGGCT+GGG | - | chr3.4:93949500-93949519 | MS.gene072972:intron | 25.0% |
| !!! | CATGGTTTTCTTATTTTTTG+TGG | - | chr3.4:93951832-93951851 | MS.gene072972:CDS | 25.0% |
| !!! | CTATTTTTCTAGATTTTCTG+CGG | - | chr3.4:93950355-93950374 | MS.gene072972:intron | 25.0% |
| !!! | CTCGTTTTAGTTTATTAACT+AGG | + | chr3.4:93951047-93951066 | None:intergenic | 25.0% |
| !!! | CTGAAATTAGGTTTTTTCAT+TGG | + | chr3.4:93950175-93950194 | None:intergenic | 25.0% |
| !!! | GCTTGATTTTGTTTTCATAT+TGG | - | chr3.4:93951631-93951650 | MS.gene072972:intron | 25.0% |
| !!! | GTTCTAAAAGTTTTCTTACA+GGG | + | chr3.4:93950932-93950951 | None:intergenic | 25.0% |
| !!! | TAGTTCAGATATTGTTTTGT+TGG | - | chr3.4:93949333-93949352 | MS.gene072972:intron | 25.0% |
| !!! | TCCATTTTTCTTAGTTATAC+TGG | - | chr3.4:93949476-93949495 | MS.gene072972:intron | 25.0% |
| !!! | TTATAATTTGTTGTGAAAGG+GGG | - | chr3.4:93950067-93950086 | MS.gene072972:intron | 25.0% |
| AAACTCTTAAGGTTAATCAC+TGG | + | chr3.4:93949879-93949898 | None:intergenic | 30.0% | |
| AAATATTCACAGCACAAGTA+TGG | + | chr3.4:93950975-93950994 | None:intergenic | 30.0% | |
| AAGCATGTTCACTATTTCAA+GGG | + | chr3.4:93951199-93951218 | None:intergenic | 30.0% | |
| AATAAAGGACAATACACAAG+TGG | + | chr3.4:93949805-93949824 | None:intergenic | 30.0% | |
| AATAAGATAGCTTACATGGT+AGG | - | chr3.4:93951266-93951285 | MS.gene072972:intron | 30.0% | |
| AATCAAAACGTTATGTTGAC+AGG | - | chr3.4:93951343-93951362 | MS.gene072972:CDS | 30.0% | |
| AATTCTTGAATCTCCATTGT+TGG | + | chr3.4:93948403-93948422 | None:intergenic | 30.0% | |
| ATAAAGGACAATACACAAGT+GGG | + | chr3.4:93949804-93949823 | None:intergenic | 30.0% | |
| ATAATCAAAGCTAGTATGGT+GGG | + | chr3.4:93951426-93951445 | None:intergenic | 30.0% | |
| ATAGCATATCATCTAATAGG+TGG | - | chr3.4:93951771-93951790 | MS.gene072972:CDS | 30.0% | |
| ATCAAAACGTTATGTTGACA+GGG | - | chr3.4:93951344-93951363 | MS.gene072972:CDS | 30.0% | |
| GCCAGTATAACTAAGAAAAA+TGG | + | chr3.4:93949480-93949499 | None:intergenic | 30.0% | |
| TCAATATTATCTTGTCTCAC+CGG | - | chr3.4:93950627-93950646 | MS.gene072972:intron | 30.0% | |
| TGTTCCAAGAAACAATTTGT+AGG | - | chr3.4:93948977-93948996 | MS.gene072972:intron | 30.0% | |
| TTGAAGAAATCAGTTTCATC+TGG | - | chr3.4:93948081-93948100 | MS.gene072972:intron | 30.0% | |
| TTTGGTCAAATTCAATGTCA+CGG | + | chr3.4:93950760-93950779 | None:intergenic | 30.0% | |
| ! | AGATAATATTGACTACCTTG+CGG | + | chr3.4:93950619-93950638 | None:intergenic | 30.0% |
| ! | AGTAATTCTAGAAATGAGAG+TGG | - | chr3.4:93948487-93948506 | MS.gene072972:intron | 30.0% |
| ! | CAATCCTACAAATTGTTTCT+TGG | + | chr3.4:93948984-93949003 | None:intergenic | 30.0% |
| ! | CCCTAACATCTCAAATTTTA+AGG | + | chr3.4:93950795-93950814 | None:intergenic | 30.0% |
| ! | CTCCTGTTTACATGTATTTT+GGG | + | chr3.4:93949442-93949461 | None:intergenic | 30.0% |
| ! | TGGTAGGATTAGTGTTAAAA+TGG | - | chr3.4:93951282-93951301 | MS.gene072972:intron | 30.0% |
| !! | ACAGAAGTACTTTAATTTGC+AGG | - | chr3.4:93951678-93951697 | MS.gene072972:CDS | 30.0% |
| !! | AGTTTTTGATGATCCAACAA+TGG | - | chr3.4:93948387-93948406 | MS.gene072972:intron | 30.0% |
| !! | GACATCTGATTTCTGAAATT+AGG | + | chr3.4:93950187-93950206 | None:intergenic | 30.0% |
| !! | TGTATTGATGTTTTTCCTCA+TGG | - | chr3.4:93951814-93951833 | MS.gene072972:CDS | 30.0% |
| !! | TTTGGTTTGTGGTTATTTGT+GGG | - | chr3.4:93950568-93950587 | MS.gene072972:intron | 30.0% |
| !!! | CATTTTAATTTGTTTCTGGC+TGG | - | chr3.4:93949499-93949518 | MS.gene072972:intron | 30.0% |
| !!! | CTGGCATTTTAATTTGTTTC+TGG | - | chr3.4:93949495-93949514 | MS.gene072972:intron | 30.0% |
| !!! | GGTTCTAAAAGTTTTCTTAC+AGG | + | chr3.4:93950933-93950952 | None:intergenic | 30.0% |
| !!! | TTTTTTTTGTAGTGGCGAAA+AGG | - | chr3.4:93948359-93948378 | MS.gene072972:intron | 30.0% |
| AACCACGAATTATGTGACTA+TGG | + | chr3.4:93949905-93949924 | None:intergenic | 35.0% | |
| AATAAAAGGTCCAGCTGTAA+CGG | - | chr3.4:93950688-93950707 | MS.gene072972:intron | 35.0% | |
| AATAAACGACAGGTGAGTAT+AGG | + | chr3.4:93951388-93951407 | None:intergenic | 35.0% | |
| AATCGAAGAGCTTCCAAAAT+CGG | - | chr3.4:93948207-93948226 | MS.gene072972:intron | 35.0% | |
| ACCAACGAATTATGTTACTC+TGG | - | chr3.4:93950486-93950505 | MS.gene072972:intron | 35.0% | |
| ACCAGAGTAACATAATTCGT+TGG | + | chr3.4:93950490-93950509 | None:intergenic | 35.0% | |
| AGTAGATCTATCAAACAGTC+TGG | - | chr3.4:93949309-93949328 | MS.gene072972:intron | 35.0% | |
| AGTTGAATGACTAGTAGTGT+CGG | + | chr3.4:93948524-93948543 | None:intergenic | 35.0% | |
| ATAAACGACAGGTGAGTATA+GGG | + | chr3.4:93951387-93951406 | None:intergenic | 35.0% | |
| ATACATTGGCAAATGTAGAG+GGG | - | chr3.4:93951720-93951739 | MS.gene072972:CDS | 35.0% | |
| ATACGCATCCTTCAAAGAAT+CGG | - | chr3.4:93949958-93949977 | MS.gene072972:intron | 35.0% | |
| ATATTGGCCAATTGAGACAT+TGG | - | chr3.4:93951647-93951666 | MS.gene072972:CDS | 35.0% | |
| CCAAAATACATGTAAACAGG+AGG | - | chr3.4:93949440-93949459 | MS.gene072972:intron | 35.0% | |
| GAAGCATGTTCACTATTTCA+AGG | + | chr3.4:93951200-93951219 | None:intergenic | 35.0% | |
| GACTATGGTCTAAACTCTTA+AGG | + | chr3.4:93949890-93949909 | None:intergenic | 35.0% | |
| GAGGGTTTAGTTAAGCATAT+AGG | - | chr3.4:93948892-93948911 | MS.gene072972:intron | 35.0% | |
| GATAATCAAAGCTAGTATGG+TGG | + | chr3.4:93951427-93951446 | None:intergenic | 35.0% | |
| GATACATTGGCAAATGTAGA+GGG | - | chr3.4:93951719-93951738 | MS.gene072972:CDS | 35.0% | |
| GATCTTGAATCTGGAAAAAG+AGG | + | chr3.4:93950237-93950256 | None:intergenic | 35.0% | |
| GCAGATAATCAAAGCTAGTA+TGG | + | chr3.4:93951430-93951449 | None:intergenic | 35.0% | |
| GGGACAAATAGAAAACCTTA+TGG | + | chr3.4:93949784-93949803 | None:intergenic | 35.0% | |
| GTACGCGCTAATGTATTAAT+TGG | - | chr3.4:93950025-93950044 | MS.gene072972:intron | 35.0% | |
| TCAGACAATAGCTGACAATA+AGG | + | chr3.4:93951478-93951497 | None:intergenic | 35.0% | |
| TGAGAACATGGATGATACAT+TGG | - | chr3.4:93951706-93951725 | MS.gene072972:CDS | 35.0% | |
| TGATACATTGGCAAATGTAG+AGG | - | chr3.4:93951718-93951737 | MS.gene072972:CDS | 35.0% | |
| TGCCCAAAATACATGTAAAC+AGG | - | chr3.4:93949437-93949456 | MS.gene072972:intron | 35.0% | |
| TGTATAATGAACACTCGCTT+TGG | - | chr3.4:93950550-93950569 | MS.gene072972:intron | 35.0% | |
| TGTATTGCTCATAAGGTCAA+TGG | - | chr3.4:93951601-93951620 | MS.gene072972:intron | 35.0% | |
| TTCCAGAGACAAAATTTACC+AGG | - | chr3.4:93951863-93951882 | MS.gene072972:CDS | 35.0% | |
| ! | AAAAGTTTTCTTACAGGGCA+TGG | + | chr3.4:93950927-93950946 | None:intergenic | 35.0% |
| ! | AAAGTTTTCTTACAGGGCAT+GGG | + | chr3.4:93950926-93950945 | None:intergenic | 35.0% |
| ! | ACTCTGGTTTAGACAAGTTA+GGG | - | chr3.4:93950502-93950521 | MS.gene072972:intron | 35.0% |
| ! | AGCGATTTTGTATGAGAAGA+AGG | + | chr3.4:93950275-93950294 | None:intergenic | 35.0% |
| ! | AGTAACAAGCGTACTTGTTA+AGG | + | chr3.4:93951166-93951185 | None:intergenic | 35.0% |
| ! | CCTCCTGTTTACATGTATTT+TGG | + | chr3.4:93949443-93949462 | None:intergenic | 35.0% |
| ! | TACTCTGGTTTAGACAAGTT+AGG | - | chr3.4:93950501-93950520 | MS.gene072972:intron | 35.0% |
| ! | TGGAAAGTTTCTGAGAAGTT+TGG | + | chr3.4:93948245-93948264 | None:intergenic | 35.0% |
| ! | TTCTGAAAGTCGTGATGAAA+AGG | + | chr3.4:93950305-93950324 | None:intergenic | 35.0% |
| !! | ACATAATTCGTTGGTTCCAT+TGG | + | chr3.4:93950481-93950500 | None:intergenic | 35.0% |
| !! | CTTTGGTTTGTGGTTATTTG+TGG | - | chr3.4:93950567-93950586 | MS.gene072972:intron | 35.0% |
| !! | GTGAATTCCATAACCGATTT+TGG | + | chr3.4:93948223-93948242 | None:intergenic | 35.0% |
| AAACAATACCTCAGTTCGCA+TGG | + | chr3.4:93948611-93948630 | None:intergenic | 40.0% | |
| AACCTCACCAATGTCTCAAT+TGG | + | chr3.4:93951657-93951676 | None:intergenic | 40.0% | |
| AATACATGTAAACAGGAGGC+TGG | - | chr3.4:93949444-93949463 | MS.gene072972:intron | 40.0% | |
| ACAATAGCTGACAATAAGGC+TGG | + | chr3.4:93951474-93951493 | None:intergenic | 40.0% | |
| ACAGTAAATGGGCCTTTGTT+TGG | + | chr3.4:93950137-93950156 | None:intergenic | 40.0% | |
| ACATAATTCGTGGTTCGCTT+CGG | - | chr3.4:93949910-93949929 | MS.gene072972:intron | 40.0% | |
| ACATGAATTTCACACCGTTG+CGG | - | chr3.4:93948053-93948072 | MS.gene072972:intron | 40.0% | |
| AGAGCTTCCAAAATCGGTTA+TGG | - | chr3.4:93948213-93948232 | MS.gene072972:intron | 40.0% | |
| AGGATACACACCATTCTTAC+TGG | - | chr3.4:93951886-93951905 | MS.gene072972:CDS | 40.0% | |
| AGTTTATTAACTAGGTCCCC+AGG | + | chr3.4:93951039-93951058 | None:intergenic | 40.0% | |
| ATAAAAGGTCCAGCTGTAAC+GGG | - | chr3.4:93950689-93950708 | MS.gene072972:intron | 40.0% | |
| CAGAAGCTAGATCTTGAATC+TGG | + | chr3.4:93950246-93950265 | None:intergenic | 40.0% | |
| CAGAGACAAAATTTACCAGG+AGG | - | chr3.4:93951866-93951885 | MS.gene072972:CDS | 40.0% | |
| GAACTCGGATTGAATTGCAA+CGG | + | chr3.4:93948187-93948206 | None:intergenic | 40.0% | |
| GACCATAGTCACATAATTCG+TGG | - | chr3.4:93949900-93949919 | MS.gene072972:intron | 40.0% | |
| GTTTATTAACTAGGTCCCCA+GGG | + | chr3.4:93951038-93951057 | None:intergenic | 40.0% | |
| TAATTGAAGATCCACAACCG+CGG | + | chr3.4:93948464-93948483 | None:intergenic | 40.0% | |
| TACATTGGCAAATGTAGAGG+GGG | - | chr3.4:93951721-93951740 | MS.gene072972:CDS | 40.0% | |
| TACGCATCCTTCAAAGAATC+GGG | - | chr3.4:93949959-93949978 | MS.gene072972:intron | 40.0% | |
| TCACAGCACAAGTATGGAAT+GGG | + | chr3.4:93950969-93950988 | None:intergenic | 40.0% | |
| TGAAAGTCGTGATGAAAAGG+AGG | + | chr3.4:93950302-93950321 | None:intergenic | 40.0% | |
| TTCACAGCACAAGTATGGAA+TGG | + | chr3.4:93950970-93950989 | None:intergenic | 40.0% | |
| TTCACCAGGCATGGAAAAAT+TGG | - | chr3.4:93949399-93949418 | MS.gene072972:intron | 40.0% | |
| TTGCAGGATTGATGAGAACA+TGG | - | chr3.4:93951694-93951713 | MS.gene072972:CDS | 40.0% | |
| TTTATTAACTAGGTCCCCAG+GGG | + | chr3.4:93951037-93951056 | None:intergenic | 40.0% | |
| TTTCTTCAATCTCTCCGCAA+CGG | + | chr3.4:93948070-93948089 | None:intergenic | 40.0% | |
| TTTGCTTGAACTTGCGTGTT+TGG | - | chr3.4:93951523-93951542 | MS.gene072972:CDS | 40.0% | |
| TTTGTATGAGAAGAAGGCAG+AGG | + | chr3.4:93950269-93950288 | None:intergenic | 40.0% | |
| ! | AAGTTTTCTTACAGGGCATG+GGG | + | chr3.4:93950925-93950944 | None:intergenic | 40.0% |
| ! | ACAACCAATTTTTCCATGCC+TGG | + | chr3.4:93949406-93949425 | None:intergenic | 40.0% |
| ! | CTCCTGGTAAATTTTGTCTC+TGG | + | chr3.4:93951868-93951887 | None:intergenic | 40.0% |
| ! | CTGGCAATTTTACCCATTGT+GGG | + | chr3.4:93951455-93951474 | None:intergenic | 40.0% |
| ! | TAGATTTTCTGCGGATACTC+CGG | - | chr3.4:93950364-93950383 | MS.gene072972:intron | 40.0% |
| ! | TTGTGAAAGGGGGTATGATT+AGG | - | chr3.4:93950077-93950096 | MS.gene072972:intron | 40.0% |
| !! | ATTGTTTTGTTGGCCTATCG+TGG | - | chr3.4:93949343-93949362 | MS.gene072972:intron | 40.0% |
| !! | TTATGTTGACAGGGAGTGTT+GGG | - | chr3.4:93951353-93951372 | MS.gene072972:CDS | 40.0% |
| !!! | GTCAGTGGAACAGTTTTGTT+AGG | + | chr3.4:93949374-93949393 | None:intergenic | 40.0% |
| AACCCACTGCAATAAACGAC+AGG | + | chr3.4:93951398-93951417 | None:intergenic | 45.0% | |
| AACGGACGTTGACGTATGAA+AGG | + | chr3.4:93948776-93948795 | None:intergenic | 45.0% | |
| AAGAATGGTGTGTATCCTCC+TGG | + | chr3.4:93951884-93951903 | None:intergenic | 45.0% | |
| AGCACAAGTATGGAATGGGT+TGG | + | chr3.4:93950965-93950984 | None:intergenic | 45.0% | |
| AGTTCAAGCAAAACCCATGG+AGG | + | chr3.4:93951515-93951534 | None:intergenic | 45.0% | |
| ATAACTTACCCACTAGCCCA+TGG | + | chr3.4:93948842-93948861 | None:intergenic | 45.0% | |
| ATCATTTAGTGCAAGCCGCA+AGG | - | chr3.4:93950601-93950620 | MS.gene072972:intron | 45.0% | |
| ATTTACTGTCCAGACTCCAG+AGG | - | chr3.4:93950148-93950167 | MS.gene072972:CDS | 45.0% | |
| CTGGAGTCTGGACAGTAAAT+GGG | + | chr3.4:93950148-93950167 | None:intergenic | 45.0% | |
| CTTCAAAGAATCGGGTACGT+GGG | - | chr3.4:93949967-93949986 | MS.gene072972:intron | 45.0% | |
| GAGATTACATTTGGCGAGCT+TGG | + | chr3.4:93948265-93948284 | None:intergenic | 45.0% | |
| GATTATCTGCCACCCACAAT+GGG | - | chr3.4:93951440-93951459 | MS.gene072972:CDS | 45.0% | |
| GCAAGTTCAAGCAAAACCCA+TGG | + | chr3.4:93951518-93951537 | None:intergenic | 45.0% | |
| GCAGCTGTCTTTGTAGCTAA+CGG | + | chr3.4:93948794-93948813 | None:intergenic | 45.0% | |
| GGAAGCTCTTCGATTGAACT+CGG | + | chr3.4:93948202-93948221 | None:intergenic | 45.0% | |
| GTAGCAAGTGTGGTTGTGTA+CGG | - | chr3.4:93950845-93950864 | MS.gene072972:intron | 45.0% | |
| GTTGCTGAGCTCATGAATAG+TGG | + | chr3.4:93949715-93949734 | None:intergenic | 45.0% | |
| TACAGGGCACGCAAAATGTA+AGG | + | chr3.4:93950823-93950842 | None:intergenic | 45.0% | |
| TATTACTGCGCTTAACTCCG+CGG | - | chr3.4:93948444-93948463 | MS.gene072972:intron | 45.0% | |
| TCATCTGGATCAGCTCCAAA+CGG | - | chr3.4:93948096-93948115 | MS.gene072972:intron | 45.0% | |
| TCCACTGACAAAACTTCACC+AGG | - | chr3.4:93949385-93949404 | MS.gene072972:intron | 45.0% | |
| TGACAAAACTTCACCAGGCA+TGG | - | chr3.4:93949390-93949409 | MS.gene072972:intron | 45.0% | |
| TGATTATCTGCCACCCACAA+TGG | - | chr3.4:93951439-93951458 | MS.gene072972:CDS | 45.0% | |
| TGCATGTAACTGTCCTGCAA+TGG | + | chr3.4:93949660-93949679 | None:intergenic | 45.0% | |
| TGCTCATCAATCGCGTCTTT+AGG | + | chr3.4:93948561-93948580 | None:intergenic | 45.0% | |
| TGTTCTTACCATGCGAACTG+AGG | - | chr3.4:93948600-93948619 | MS.gene072972:intron | 45.0% | |
| TTCAAAGAATCGGGTACGTG+GGG | - | chr3.4:93949968-93949987 | MS.gene072972:intron | 45.0% | |
| ! | AACCACACTTGCTACCTTAC+AGG | + | chr3.4:93950840-93950859 | None:intergenic | 45.0% |
| ! | ACCACACTTGCTACCTTACA+GGG | + | chr3.4:93950839-93950858 | None:intergenic | 45.0% |
| ! | ACTTGATGGGTCTTGCTAAC+CGG | - | chr3.4:93951009-93951028 | MS.gene072972:intron | 45.0% |
| ! | CACCTGTCGTTTATTGCAGT+GGG | - | chr3.4:93951393-93951412 | MS.gene072972:CDS | 45.0% |
| ! | GCAATTTTACCCATTGTGGG+TGG | + | chr3.4:93951452-93951471 | None:intergenic | 45.0% |
| ! | GCATAGTCGGTACGGTATTT+TGG | - | chr3.4:93949996-93950015 | MS.gene072972:intron | 45.0% |
| ! | GCGAATTTTCACGCGAATTC+CGG | - | chr3.4:93950400-93950419 | MS.gene072972:intron | 45.0% |
| ! | GCTGGCAATTTTACCCATTG+TGG | + | chr3.4:93951456-93951475 | None:intergenic | 45.0% |
| ! | GTTATGTTGACAGGGAGTGT+TGG | - | chr3.4:93951352-93951371 | MS.gene072972:CDS | 45.0% |
| ! | TACATTTTGCGTGCCCTGTA+AGG | - | chr3.4:93950823-93950842 | MS.gene072972:intron | 45.0% |
| ! | TCACCTGTCGTTTATTGCAG+TGG | - | chr3.4:93951392-93951411 | MS.gene072972:CDS | 45.0% |
| ! | TCTGGAGTCTGGACAGTAAA+TGG | + | chr3.4:93950149-93950168 | None:intergenic | 45.0% |
| ! | TGCAGAATCCTTAGAAGCGT+TGG | + | chr3.4:93948750-93948769 | None:intergenic | 45.0% |
| !! | ACAAGTATGGAATGGGTTGG+AGG | + | chr3.4:93950962-93950981 | None:intergenic | 45.0% |
| !! | TATGTTGACAGGGAGTGTTG+GGG | - | chr3.4:93951354-93951373 | MS.gene072972:CDS | 45.0% |
| !! | TGAACACTCGCTTTGGTTTG+TGG | - | chr3.4:93950557-93950576 | MS.gene072972:intron | 45.0% |
| !!! | AGGTTTTTTCATTGGGCCTC+TGG | + | chr3.4:93950167-93950186 | None:intergenic | 45.0% |
| !!! | CGGTACGGTATTTTGGTTTG+CGG | - | chr3.4:93950003-93950022 | MS.gene072972:intron | 45.0% |
| !!! | TGGAACAGTTTTGTTAGGCC+AGG | + | chr3.4:93949369-93949388 | None:intergenic | 45.0% |
| AACACTTGTCTCCCAGCAAG+GGG | - | chr3.4:93949752-93949771 | MS.gene072972:intron | 50.0% | |
| ACCAATTCGCGGTTCTCCAA+TGG | - | chr3.4:93950462-93950481 | MS.gene072972:intron | 50.0% | |
| CAACACTTGTCTCCCAGCAA+GGG | - | chr3.4:93949751-93949770 | MS.gene072972:intron | 50.0% | |
| CACACCTGCCATCACCATTA+CGG | + | chr3.4:93950664-93950683 | None:intergenic | 50.0% | |
| CCACGTACCCGATTCTTTGA+AGG | + | chr3.4:93949969-93949988 | None:intergenic | 50.0% | |
| CCTTCAAAGAATCGGGTACG+TGG | - | chr3.4:93949966-93949985 | MS.gene072972:intron | 50.0% | |
| CTCGGATTGAATTGCAACGG+CGG | + | chr3.4:93948184-93948203 | None:intergenic | 50.0% | |
| CTTCTTCCTCCTAACAGCAG+CGG | - | chr3.4:93950209-93950228 | MS.gene072972:CDS | 50.0% | |
| GAAGAAGCGGAAGAGGAAGA+AGG | + | chr3.4:93948138-93948157 | None:intergenic | 50.0% | |
| GGCAGGTGTGGACGAATAAA+AGG | - | chr3.4:93950674-93950693 | MS.gene072972:intron | 50.0% | |
| GGCCAATTGAGACATTGGTG+AGG | - | chr3.4:93951652-93951671 | MS.gene072972:CDS | 50.0% | |
| GTCGGATCTGGAAGAAGAAG+CGG | + | chr3.4:93948151-93948170 | None:intergenic | 50.0% | |
| TCAAAGAATCGGGTACGTGG+GGG | - | chr3.4:93949969-93949988 | MS.gene072972:intron | 50.0% | |
| TCCATTGGAGAACCGCGAAT+TGG | + | chr3.4:93950466-93950485 | None:intergenic | 50.0% | |
| TCTGGAAGAAGAAGCGGAAG+AGG | + | chr3.4:93948145-93948164 | None:intergenic | 50.0% | |
| TGCTTCCTGTGGAATGTGGA+AGG | + | chr3.4:93949579-93949598 | None:intergenic | 50.0% | |
| TTCCACATTCCACAGGAAGC+AGG | - | chr3.4:93949578-93949597 | MS.gene072972:intron | 50.0% | |
| ! | AAATGTAGAGGGGGCACAAG+GGG | - | chr3.4:93951730-93951749 | MS.gene072972:CDS | 50.0% |
| ! | AGTGTGAGTTTGCTCCTCCA+TGG | - | chr3.4:93951498-93951517 | MS.gene072972:CDS | 50.0% |
| ! | CAAATGTAGAGGGGGCACAA+GGG | - | chr3.4:93951729-93951748 | MS.gene072972:CDS | 50.0% |
| ! | GTGTGAGTTTGCTCCTCCAT+GGG | - | chr3.4:93951499-93951518 | MS.gene072972:CDS | 50.0% |
| ! | GTTTTCGGCCAACGCTTCTA+AGG | - | chr3.4:93948739-93948758 | MS.gene072972:intron | 50.0% |
| !! | GCCTGGTGAAGTTTTGTCAG+TGG | + | chr3.4:93949389-93949408 | None:intergenic | 50.0% |
| AAAGAGGAGCCGCTGCTGTT+AGG | + | chr3.4:93950221-93950240 | None:intergenic | 55.0% | |
| ACTTACCCACTAGCCCATGG+AGG | + | chr3.4:93948839-93948858 | None:intergenic | 55.0% | |
| AGCAAGGGGAGGTTGCCATA+AGG | - | chr3.4:93949766-93949785 | MS.gene072972:intron | 55.0% | |
| ATTCGCGGTACTTCCGGTAC+AGG | + | chr3.4:93950430-93950449 | None:intergenic | 55.0% | |
| CAAAGAATCGGGTACGTGGG+GGG | - | chr3.4:93949970-93949989 | MS.gene072972:intron | 55.0% | |
| CACATTCCACAGGAAGCAGG+TGG | - | chr3.4:93949581-93949600 | MS.gene072972:intron | 55.0% | |
| CACCTGCTTCCTGTGGAATG+TGG | + | chr3.4:93949583-93949602 | None:intergenic | 55.0% | |
| GAATTCCGGCGAACCTGTAC+CGG | - | chr3.4:93950414-93950433 | MS.gene072972:intron | 55.0% | |
| GCAACACTTGTCTCCCAGCA+AGG | - | chr3.4:93949750-93949769 | MS.gene072972:intron | 55.0% | |
| GCAGCAGGTAGTTCCATTGC+AGG | - | chr3.4:93949644-93949663 | MS.gene072972:intron | 55.0% | |
| GCCCTGTAAGGTAGCAAGTG+TGG | - | chr3.4:93950835-93950854 | MS.gene072972:intron | 55.0% | |
| GGTTCGTGCGAACCAATTCG+CGG | - | chr3.4:93950451-93950470 | MS.gene072972:intron | 55.0% | |
| GTTCGCTTCGGTACGTGGTA+CGG | - | chr3.4:93949922-93949941 | MS.gene072972:intron | 55.0% | |
| TACTTCCGGTACAGGTTCGC+CGG | + | chr3.4:93950422-93950441 | None:intergenic | 55.0% | |
| TATGGCAACCTCCCCTTGCT+GGG | + | chr3.4:93949766-93949785 | None:intergenic | 55.0% | |
| TGAATTGCAACGGCGGATCG+AGG | + | chr3.4:93948177-93948196 | None:intergenic | 55.0% | |
| TGCCATCACCATTACGGCAG+CGG | + | chr3.4:93950658-93950677 | None:intergenic | 55.0% | |
| TGCTGCTGCTGCTGCAACAA+CGG | + | chr3.4:93949621-93949640 | None:intergenic | 55.0% | |
| TTATGGCAACCTCCCCTTGC+TGG | + | chr3.4:93949767-93949786 | None:intergenic | 55.0% | |
| TTCCACAGGAAGCAGGTGGA+TGG | - | chr3.4:93949585-93949604 | MS.gene072972:intron | 55.0% | |
| TTCGCTTCGGTACGTGGTAC+GGG | - | chr3.4:93949923-93949942 | MS.gene072972:intron | 55.0% | |
| TTCGGTACGTGGTACGGGTT+CGG | - | chr3.4:93949928-93949947 | MS.gene072972:intron | 55.0% | |
| TTGTTAGGCCAGGCCACGAT+AGG | + | chr3.4:93949359-93949378 | None:intergenic | 55.0% | |
| ! | ACGTGGGGGGTATGCATAGT+CGG | - | chr3.4:93949983-93950002 | MS.gene072972:intron | 55.0% |
| ! | GCAAATGTAGAGGGGGCACA+AGG | - | chr3.4:93951728-93951747 | MS.gene072972:CDS | 55.0% |
| ! | GGGGGTATGCATAGTCGGTA+CGG | - | chr3.4:93949988-93950007 | MS.gene072972:intron | 55.0% |
| ! | TTTGTTGGCCTATCGTGGCC+TGG | - | chr3.4:93949348-93949367 | MS.gene072972:intron | 55.0% |
| !! | AGAGGAAGAAGGAGCGCTAG+TGG | + | chr3.4:93948127-93948146 | None:intergenic | 55.0% |
| !! | CGTAATGGTGATGGCAGGTG+TGG | - | chr3.4:93950662-93950681 | MS.gene072972:intron | 55.0% |
| !! | GAACCGATTCGCGGTACTTC+CGG | + | chr3.4:93950436-93950455 | None:intergenic | 55.0% |
| !! | GTACCGGAAGTACCGCGAAT+CGG | - | chr3.4:93950430-93950449 | MS.gene072972:intron | 55.0% |
| !! | TTCATTGGGCCTCTGGAGTC+TGG | + | chr3.4:93950160-93950179 | None:intergenic | 55.0% |
| AACGGCGGATCGAGGATCGT+CGG | + | chr3.4:93948169-93948188 | None:intergenic | 60.0% | |
| ACTTGTCTCCCAGCAAGGGG+AGG | - | chr3.4:93949755-93949774 | MS.gene072972:intron | 60.0% | |
| AGCCGCTGCCGTAATGGTGA+TGG | - | chr3.4:93950653-93950672 | MS.gene072972:intron | 60.0% | |
| ATTCGCAGCCGCAAGCGTAC+CGG | + | chr3.4:93950386-93950405 | None:intergenic | 60.0% | |
| CACGGCCTTCCACATTCCAC+AGG | - | chr3.4:93949571-93949590 | MS.gene072972:intron | 60.0% | |
| CGGATACTCCGGTACGCTTG+CGG | - | chr3.4:93950375-93950394 | MS.gene072972:intron | 60.0% | |
| CTCCATCCACCTGCTTCCTG+TGG | + | chr3.4:93949590-93949609 | None:intergenic | 60.0% | |
| CTGCTCAGCAGCACACATCC+AGG | + | chr3.4:93950723-93950742 | None:intergenic | 60.0% | |
| CTGTGGAATGTGGAAGGCCG+TGG | + | chr3.4:93949573-93949592 | None:intergenic | 60.0% | |
| GGATCGAGGATCGTCGGATC+TGG | + | chr3.4:93948163-93948182 | None:intergenic | 60.0% | |
| GTGAACTCGCCCGTTACAGC+TGG | + | chr3.4:93950701-93950720 | None:intergenic | 60.0% | |
| TAGTGCCCCTGCACCTCCAT+GGG | - | chr3.4:93948823-93948842 | MS.gene072972:intron | 60.0% | |
| TCGGTACGTGGTACGGGTTC+GGG | - | chr3.4:93949929-93949948 | MS.gene072972:intron | 60.0% | |
| TCGTGGTTCGCTTCGGTACG+TGG | - | chr3.4:93949917-93949936 | MS.gene072972:intron | 60.0% | |
| TCTTGCTAACCGGTGCCCCT+GGG | - | chr3.4:93951019-93951038 | MS.gene072972:intron | 60.0% | |
| TGCGCTTAACTCCGCGGTTG+TGG | - | chr3.4:93948450-93948469 | MS.gene072972:intron | 60.0% | |
| ! | ACTAGCCCATGGAGGTGCAG+GGG | + | chr3.4:93948831-93948850 | None:intergenic | 60.0% |
| ! | CACTAGCCCATGGAGGTGCA+GGG | + | chr3.4:93948832-93948851 | None:intergenic | 60.0% |
| ! | CTGGATGTGTGCTGCTGAGC+AGG | - | chr3.4:93950721-93950740 | MS.gene072972:intron | 60.0% |
| ! | GTGTGCTGCTGAGCAGGTCT+CGG | - | chr3.4:93950727-93950746 | MS.gene072972:intron | 60.0% |
| !! | CTGCACCTCCATGGGCTAGT+GGG | - | chr3.4:93948831-93948850 | MS.gene072972:intron | 60.0% |
| !! | CTGTAACGGGCGAGTTCACC+TGG | - | chr3.4:93950702-93950721 | MS.gene072972:intron | 60.0% |
| !! | GCTGCCGTAATGGTGATGGC+AGG | - | chr3.4:93950657-93950676 | MS.gene072972:intron | 60.0% |
| !! | GGAAGAAGGAGCGCTAGTGG+TGG | + | chr3.4:93948124-93948143 | None:intergenic | 60.0% |
| !! | GGAATGGGTTGGAGGAGTGC+AGG | + | chr3.4:93950954-93950973 | None:intergenic | 60.0% |
| !! | GGTTCGCACGAACCGATTCG+CGG | + | chr3.4:93950445-93950464 | None:intergenic | 60.0% |
| CATTACGGCAGCGGCTGCTC+CGG | + | chr3.4:93950649-93950668 | None:intergenic | 65.0% | |
| CTAGTGCCCCTGCACCTCCA+TGG | - | chr3.4:93948822-93948841 | MS.gene072972:intron | 65.0% | |
| CTTGCTAACCGGTGCCCCTG+GGG | - | chr3.4:93951020-93951039 | MS.gene072972:intron | 65.0% | |
| GAGGAGCCGCTGCTGTTAGG+AGG | + | chr3.4:93950218-93950237 | None:intergenic | 65.0% | |
| GCGCTAGTGGTGGCTCCGTT+TGG | + | chr3.4:93948114-93948133 | None:intergenic | 65.0% | |
| GTCTTGCTAACCGGTGCCCC+TGG | - | chr3.4:93951018-93951037 | MS.gene072972:intron | 65.0% | |
| ! | AACTAGGTCCCCAGGGGCAC+CGG | + | chr3.4:93951031-93951050 | None:intergenic | 65.0% |
| ! | CCACTAGCCCATGGAGGTGC+AGG | + | chr3.4:93948833-93948852 | None:intergenic | 65.0% |
| !! | CCTGCACCTCCATGGGCTAG+TGG | - | chr3.4:93948830-93948849 | MS.gene072972:intron | 65.0% |
| CGGAGCAGCCGCTGCCGTAA+TGG | - | chr3.4:93950647-93950666 | MS.gene072972:intron | 70.0% | |
| GCAGCAGCAGCAGCAGCAGC+AGG | - | chr3.4:93949626-93949645 | MS.gene072972:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 93948012 | 93951911 | 93948012 | ID=MS.gene072972 |
| chr3.4 | mRNA | 93948012 | 93951911 | 93948012 | ID=MS.gene072972.t1;Parent=MS.gene072972 |
| chr3.4 | exon | 93951647 | 93951911 | 93951647 | ID=MS.gene072972.t1.exon1;Parent=MS.gene072972.t1 |
| chr3.4 | CDS | 93951647 | 93951911 | 93951647 | ID=cds.MS.gene072972.t1;Parent=MS.gene072972.t1 |
| chr3.4 | exon | 93951302 | 93951552 | 93951302 | ID=MS.gene072972.t1.exon2;Parent=MS.gene072972.t1 |
| chr3.4 | CDS | 93951302 | 93951552 | 93951302 | ID=cds.MS.gene072972.t1;Parent=MS.gene072972.t1 |
| chr3.4 | exon | 93951071 | 93951216 | 93951071 | ID=MS.gene072972.t1.exon3;Parent=MS.gene072972.t1 |
| chr3.4 | CDS | 93951071 | 93951216 | 93951071 | ID=cds.MS.gene072972.t1;Parent=MS.gene072972.t1 |
| chr3.4 | exon | 93950136 | 93950330 | 93950136 | ID=MS.gene072972.t1.exon4;Parent=MS.gene072972.t1 |
| chr3.4 | CDS | 93950136 | 93950330 | 93950136 | ID=cds.MS.gene072972.t1;Parent=MS.gene072972.t1 |
| chr3.4 | exon | 93948134 | 93948223 | 93948134 | ID=MS.gene072972.t1.exon5;Parent=MS.gene072972.t1 |
| chr3.4 | CDS | 93948134 | 93948223 | 93948134 | ID=cds.MS.gene072972.t1;Parent=MS.gene072972.t1 |
| chr3.4 | exon | 93948012 | 93948063 | 93948012 | ID=MS.gene072972.t1.exon6;Parent=MS.gene072972.t1 |
| chr3.4 | CDS | 93948012 | 93948063 | 93948012 | ID=cds.MS.gene072972.t1;Parent=MS.gene072972.t1 |
| Gene Sequence |
| Protein sequence |
