Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene065608.t1 | KEH27221.1 | 88.7 | 655 | 73 | 1 | 5 | 658 | 40 | 694 | 0.00E+00 | 1199.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene065608.t1 | Q7Y228 | 63.1 | 655 | 217 | 6 | 5 | 658 | 41 | 671 | 6.2e-237 | 821.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene065608.t1 | A0A072UCN4 | 88.7 | 655 | 73 | 1 | 5 | 658 | 40 | 694 | 0.0e+00 | 1199.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene05483 | MS.gene065608 | 0.80108 | 1.07E-48 | -1.69E-46 |
MS.gene060095 | MS.gene065608 | 0.932099 | 1.41E-94 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene065608.t1 | MTR_6g088825 | 88.702 | 655 | 73 | 1 | 5 | 658 | 40 | 694 | 0.0 | 1211 |
MS.gene065608.t1 | MTR_6g088825 | 90.143 | 558 | 54 | 1 | 5 | 561 | 40 | 597 | 0.0 | 1039 |
MS.gene065608.t1 | MTR_6g088825 | 89.464 | 522 | 55 | 0 | 5 | 526 | 40 | 561 | 0.0 | 976 |
MS.gene065608.t1 | MTR_7g107100 | 43.932 | 651 | 325 | 13 | 13 | 657 | 65 | 681 | 0.0 | 543 |
MS.gene065608.t1 | MTR_7g107100 | 44.925 | 601 | 296 | 10 | 13 | 609 | 65 | 634 | 9.97e-179 | 523 |
MS.gene065608.t1 | MTR_7g107100 | 42.704 | 651 | 295 | 13 | 13 | 657 | 65 | 643 | 1.35e-173 | 510 |
MS.gene065608.t1 | MTR_7g107100 | 45.389 | 553 | 269 | 9 | 13 | 561 | 65 | 588 | 1.22e-164 | 484 |
MS.gene065608.t1 | MTR_7g107100 | 46.602 | 515 | 243 | 8 | 13 | 523 | 65 | 551 | 9.57e-158 | 466 |
MS.gene065608.t1 | MTR_6g088830 | 76.471 | 51 | 12 | 0 | 608 | 658 | 1 | 51 | 1.01e-20 | 86.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene065608.t1 | AT5G19740 | 64.122 | 655 | 210 | 6 | 5 | 658 | 41 | 671 | 0.0 | 853 |
MS.gene065608.t1 | AT3G54720 | 41.159 | 656 | 347 | 10 | 6 | 657 | 74 | 694 | 4.78e-168 | 498 |
MS.gene065608.t1 | AT4G07670 | 61.423 | 267 | 71 | 5 | 107 | 364 | 5 | 248 | 5.54e-108 | 328 |
MS.gene065608.t1 | AT4G07670 | 64.407 | 236 | 61 | 3 | 129 | 364 | 1 | 213 | 7.92e-102 | 311 |
Find 165 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCAATCATTCTCTGGAATTT+TGG | 0.043549 | 6.3:+63519409 | MS.gene065608:CDS |
CACAAAGCATTTATGATTCT+TGG | 0.126841 | 6.3:+63511389 | MS.gene065608:CDS |
CATAATATGATTGTTCTTCT+AGG | 0.148067 | 6.3:-63510777 | None:intergenic |
GCAACAATTCAAAATGTTAT+TGG | 0.207332 | 6.3:+63510274 | MS.gene065608:CDS |
TCCTTTGATACCTTCATTGC+CGG | 0.287316 | 6.3:+63509470 | MS.gene065608:CDS |
AGCACCAAGGAACGTGAAAA+AGG | 0.292965 | 6.3:-63507674 | None:intergenic |
TCATATAGTGAATGGTATAC+TGG | 0.305163 | 6.3:-63515719 | None:intergenic |
CCATCTAAACATACTGTATA+TGG | 0.310892 | 6.3:+63519383 | MS.gene065608:CDS |
GAAAACAGCCGCAAGTGTTT+GGG | 0.313133 | 6.3:+63516633 | MS.gene065608:intron |
GTTTGTAGATTTGTCATCTT+AGG | 0.313737 | 6.3:+63510429 | MS.gene065608:intron |
ATTTGAATGTCAGCTTAGTA+TGG | 0.322983 | 6.3:+63516822 | MS.gene065608:intron |
GGGAGTGTTTATAGTGGTAT+TGG | 0.325942 | 6.3:+63509366 | MS.gene065608:CDS |
TCTCACCACATACCTTTATC+TGG | 0.327185 | 6.3:-63516942 | None:intergenic |
CTTTATCTGGTCATTTATCT+TGG | 0.329159 | 6.3:-63516929 | None:intergenic |
GAACAATCATATTATGCAAT+TGG | 0.330047 | 6.3:+63510784 | MS.gene065608:CDS |
CACTATATGATGATTTCATT+TGG | 0.335549 | 6.3:+63515732 | MS.gene065608:CDS |
CCAAAATTCCAGAGAATGAT+TGG | 0.339181 | 6.3:-63519409 | None:intergenic |
TATGATTCTTGGACTAGTTC+TGG | 0.340849 | 6.3:+63511400 | MS.gene065608:CDS |
ATGCTTTGTGATGAGTTATC+TGG | 0.354769 | 6.3:-63511376 | None:intergenic |
GGAACTCTTGCATACCTATC+AGG | 0.358162 | 6.3:-63510319 | None:intergenic |
GTAAAGATGCACCGATCTAT+AGG | 0.358587 | 6.3:+63509565 | MS.gene065608:CDS |
CATAGGGATGCATGGACATT+TGG | 0.367762 | 6.3:+63510456 | MS.gene065608:CDS |
GGAAAACAGCCGCAAGTGTT+TGG | 0.368175 | 6.3:+63516632 | MS.gene065608:intron |
AGTGCTGCAGTGCCACTATT+AGG | 0.369332 | 6.3:-63510489 | None:intergenic |
AGGGAACCACTTTGCTTCAC+TGG | 0.374873 | 6.3:-63509307 | None:intergenic |
GCTTCCTTGTCTTAAATTGA+AGG | 0.379368 | 6.3:-63507726 | None:intergenic |
TCATCTATCACATCAGAATA+AGG | 0.379472 | 6.3:-63507761 | None:intergenic |
GCATATAAAGAAGGTGCTAT+TGG | 0.391962 | 6.3:+63509246 | MS.gene065608:CDS |
ATAAGCTGCAGCTTCATTGT+TGG | 0.393312 | 6.3:-63507582 | None:intergenic |
ATAGAGAAGTTCTTGCTTCA+AGG | 0.394836 | 6.3:+63511146 | MS.gene065608:CDS |
ATCTAAAAGTTTGGAAGGTT+AGG | 0.397386 | 6.3:+63511977 | MS.gene065608:intron |
ATGTTTCAAAGGCATATTGC+AGG | 0.399316 | 6.3:+63515776 | MS.gene065608:CDS |
CAAGATAAATGACCAGATAA+AGG | 0.401012 | 6.3:+63516930 | MS.gene065608:CDS |
CACCAAGTGGTGTTCAAGTT+GGG | 0.406469 | 6.3:+63509346 | MS.gene065608:CDS |
TGTGAGAATTTCAAGGTTGT+TGG | 0.406769 | 6.3:-63507531 | None:intergenic |
AAGGAGCAGAAGAGCCTGAT+AGG | 0.407473 | 6.3:+63510305 | MS.gene065608:CDS |
TGCCAATCATCCTCGGCAAC+AGG | 0.409891 | 6.3:-63509537 | None:intergenic |
ATACCTTCATTGCCGGTGTC+AGG | 0.411693 | 6.3:+63509477 | MS.gene065608:CDS |
CTAGCCCAACCAGGTGTTGT+AGG | 0.421364 | 6.3:-63509393 | None:intergenic |
AATGCCTTGGTATAAGCATT+TGG | 0.423050 | 6.3:+63517470 | MS.gene065608:CDS |
CCAGCAGCTGACATAGCCTT+TGG | 0.425147 | 6.3:+63512046 | MS.gene065608:CDS |
CTATTTAAAACTCAAAGAAA+TGG | 0.426789 | 6.3:+63509152 | MS.gene065608:CDS |
TAACTGAGATTGAGAATTCC+TGG | 0.427807 | 6.3:-63509600 | None:intergenic |
TCTGTGGTTTATGTTAACTA+TGG | 0.428511 | 6.3:+63509117 | MS.gene065608:CDS |
AACAATCATATTATGCAATT+GGG | 0.429688 | 6.3:+63510785 | MS.gene065608:CDS |
GTATAGTACAACACGAAGTT+TGG | 0.433322 | 6.3:+63519477 | MS.gene065608:CDS |
TATGGCTCCCAATCATTCTC+TGG | 0.438418 | 6.3:+63519401 | MS.gene065608:CDS |
CTTAAATTGAAGGTAAAAGA+AGG | 0.442989 | 6.3:-63507716 | None:intergenic |
GTCCTGTTGCCGAGGATGAT+TGG | 0.444374 | 6.3:+63509535 | MS.gene065608:CDS |
CCATATACAGTATGTTTAGA+TGG | 0.446484 | 6.3:-63519383 | None:intergenic |
TAGAGAAGTTCTTGCTTCAA+GGG | 0.456455 | 6.3:+63511147 | MS.gene065608:CDS |
GACTCAGCAGTAGGTGGACC+AGG | 0.460938 | 6.3:+63511190 | MS.gene065608:CDS |
CCACCAAGTGGTGTTCAAGT+TGG | 0.462478 | 6.3:+63509345 | MS.gene065608:CDS |
TCCAGATAGGATCAACAGAA+TGG | 0.463877 | 6.3:+63511113 | MS.gene065608:intron |
TAAAGATGCACCGATCTATA+GGG | 0.467274 | 6.3:+63509566 | MS.gene065608:CDS |
TTAATTCTCTCACTCTAAAG+TGG | 0.467511 | 6.3:-63517392 | None:intergenic |
TATTTAAAACTCAAAGAAAT+GGG | 0.477311 | 6.3:+63509153 | MS.gene065608:CDS |
AGATCCTACAACACCTGGTT+GGG | 0.477383 | 6.3:+63509389 | MS.gene065608:CDS |
GCTGACATAGCCTTTGGAAA+AGG | 0.479250 | 6.3:+63512052 | MS.gene065608:CDS |
GGAGCAGTTGATCCTAATAG+TGG | 0.486786 | 6.3:+63510477 | MS.gene065608:CDS |
TTCCATGCATATGCCAAGTC+AGG | 0.487962 | 6.3:+63507797 | MS.gene065608:CDS |
TGTTGCCGAGGATGATTGGC+AGG | 0.488184 | 6.3:+63509539 | MS.gene065608:CDS |
TGAAATCATCATATAGTGAA+TGG | 0.489328 | 6.3:-63515727 | None:intergenic |
CAAGTTGGGAGTGTTTATAG+TGG | 0.489445 | 6.3:+63509360 | MS.gene065608:CDS |
AGGTACTGCCATTGGTTCTG+TGG | 0.490029 | 6.3:+63509101 | MS.gene065608:intron |
CTCCCAACTTGAACACCACT+TGG | 0.490591 | 6.3:-63509348 | None:intergenic |
ATTCAGGTAGCTCAAAGACT+AGG | 0.495643 | 6.3:+63510729 | MS.gene065608:intron |
CCAAAGGCTATGTCAGCTGC+TGG | 0.496497 | 6.3:-63512046 | None:intergenic |
AATGTTATTGGTGTGATTGA+AGG | 0.497237 | 6.3:+63510286 | MS.gene065608:CDS |
GCAATATGCCTTTGAAACAT+AGG | 0.499231 | 6.3:-63515773 | None:intergenic |
TTGTCATCTTAGGCAACCAT+AGG | 0.500477 | 6.3:+63510439 | MS.gene065608:CDS |
ATTCCCACATGCTGTAGAAA+AGG | 0.500976 | 6.3:-63512022 | None:intergenic |
TGGTTTATGTTAACTATGGA+AGG | 0.504096 | 6.3:+63509121 | MS.gene065608:CDS |
CACAGACAAAGATGGTCTCC+TGG | 0.508039 | 6.3:+63517446 | MS.gene065608:CDS |
TTGGCATATGCATGGAATGT+AGG | 0.509240 | 6.3:-63507791 | None:intergenic |
AGCATATGATAAATAATCAA+AGG | 0.509525 | 6.3:-63516695 | None:intergenic |
TTAAGACAAGGAAGCTATGA+AGG | 0.509719 | 6.3:+63507734 | MS.gene065608:CDS |
TAGTTCTGGTAGTTCTCCTC+AGG | 0.510582 | 6.3:+63511414 | MS.gene065608:CDS |
GTATGCAAGAGCAACATCAT+AGG | 0.511906 | 6.3:-63507651 | None:intergenic |
TCACCTGACACCGGCAATGA+AGG | 0.513336 | 6.3:-63509480 | None:intergenic |
CAAGTAAAGGATGGAGAACA+TGG | 0.514703 | 6.3:+63517361 | MS.gene065608:CDS |
CCAGATAGGATCAACAGAAT+GGG | 0.514757 | 6.3:+63511114 | MS.gene065608:intron |
AGATTGAGAATTCCTGGTCC+TGG | 0.516398 | 6.3:-63509594 | None:intergenic |
TCCTTGATGTACTTATACAT+AGG | 0.516452 | 6.3:-63516889 | None:intergenic |
CAAAATTCCAGAGAATGATT+GGG | 0.518005 | 6.3:-63519408 | None:intergenic |
TTGGTGATCCTATGTTTCAA+AGG | 0.518214 | 6.3:+63515765 | MS.gene065608:CDS |
TGATTATTTATCATATGCTA+AGG | 0.519301 | 6.3:+63516699 | MS.gene065608:CDS |
CAAATGTCCATGCATCCCTA+TGG | 0.520417 | 6.3:-63510455 | None:intergenic |
CATTTATCTAAAAGTTTGGA+AGG | 0.520971 | 6.3:+63511972 | MS.gene065608:intron |
TGGCATATGCATGGAATGTA+GGG | 0.522299 | 6.3:-63507790 | None:intergenic |
CAACATCATAGGATGTTACA+TGG | 0.523286 | 6.3:-63507640 | None:intergenic |
CATATAGTGAATGGTATACT+GGG | 0.524417 | 6.3:-63515718 | None:intergenic |
CTAGGGAAGCTTCAGAAAAG+AGG | 0.527071 | 6.3:+63510747 | MS.gene065608:CDS |
GAAAAGATAATTAGATCAAT+CGG | 0.528268 | 6.3:+63509510 | MS.gene065608:CDS |
TCATAGGATGTTACATGGGT+TGG | 0.529776 | 6.3:-63507635 | None:intergenic |
TTGCCGGTGTCAGGTGAAGA+TGG | 0.529876 | 6.3:+63509486 | MS.gene065608:CDS |
ACTTCCCTGCCAATCATCCT+CGG | 0.533837 | 6.3:-63509544 | None:intergenic |
TTTGGGGTCTAGTAGCACTT+TGG | 0.540009 | 6.3:+63516650 | MS.gene065608:CDS |
CCAACTTGAACACCACTTGG+TGG | 0.542131 | 6.3:-63509345 | None:intergenic |
TATAGGGTTGGACCAGGACC+AGG | 0.544466 | 6.3:+63509582 | MS.gene065608:CDS |
GCTTATACCAAGGCATTCCC+AGG | 0.544771 | 6.3:-63517464 | None:intergenic |
TTGATCAATTCTTCAAGCTG+TGG | 0.545209 | 6.3:-63511232 | None:intergenic |
TCAAAGGATGAAGTGGAGAA+AGG | 0.546301 | 6.3:+63509438 | MS.gene065608:CDS |
AAGTTTGGAAGGTTAGGAAG+TGG | 0.547356 | 6.3:+63511983 | MS.gene065608:intron |
ACCTACGTACTGCAGAATCA+TGG | 0.549807 | 6.3:+63519453 | MS.gene065608:CDS |
GAGATCCTACAACACCTGGT+TGG | 0.552676 | 6.3:+63509388 | MS.gene065608:CDS |
TTCAGGTAGCTCAAAGACTA+GGG | 0.552792 | 6.3:+63510730 | MS.gene065608:intron |
AATGCATCAGGTACTGCCAT+TGG | 0.553308 | 6.3:+63509093 | MS.gene065608:intron |
GCATATGATAAATAATCAAA+GGG | 0.553631 | 6.3:-63516694 | None:intergenic |
AAATAGAAGCAAGTAAAGGA+TGG | 0.554901 | 6.3:+63517352 | MS.gene065608:CDS |
TAGGGAAGCTTCAGAAAAGA+GGG | 0.556894 | 6.3:+63510748 | MS.gene065608:CDS |
AACATAAACCACAGAACCAA+TGG | 0.557063 | 6.3:-63509109 | None:intergenic |
GTCTATGTGTGAGAATTTCA+AGG | 0.560924 | 6.3:-63507538 | None:intergenic |
TTATGTTAACTATGGAAGGG+TGG | 0.562220 | 6.3:+63509125 | MS.gene065608:CDS |
AAGGATGAAGTGGAGAAAGG+AGG | 0.563177 | 6.3:+63509441 | MS.gene065608:CDS |
ATGGTCTCCTGGGAATGCCT+TGG | 0.564137 | 6.3:+63517457 | MS.gene065608:CDS |
CAGGAAATAGAAGCAAGTAA+AGG | 0.568178 | 6.3:+63517348 | MS.gene065608:intron |
CGTGCATTCACAGACAAAGA+TGG | 0.568743 | 6.3:+63517438 | MS.gene065608:CDS |
TTAAATGTTGACTCAGCAGT+AGG | 0.568992 | 6.3:+63511181 | MS.gene065608:CDS |
ATTAAATGATAGATTGATGA+TGG | 0.573269 | 6.3:+63517410 | MS.gene065608:CDS |
GAGACTATCAAAGGATGAAG+TGG | 0.573287 | 6.3:+63509431 | MS.gene065608:CDS |
ATCATATGCTAAGGAGCTCA+AGG | 0.574525 | 6.3:+63516708 | MS.gene065608:CDS |
ACACATAGACCACACATAGC+AGG | 0.575904 | 6.3:+63507551 | MS.gene065608:CDS |
TACCTGACTTGGCATATGCA+TGG | 0.579781 | 6.3:-63507799 | None:intergenic |
ACAGTTGTATTAGCAAAGCA+TGG | 0.581680 | 6.3:+63509192 | MS.gene065608:CDS |
AGCACTTTGGCTAGCAGATG+AGG | 0.582633 | 6.3:+63516663 | MS.gene065608:CDS |
TAGGCAACCATAGGGATGCA+TGG | 0.591293 | 6.3:+63510448 | MS.gene065608:CDS |
TGTTAACTATGGAAGGGTGG+AGG | 0.591508 | 6.3:+63509128 | MS.gene065608:CDS |
CCTGGTCCAACCCTATAGAT+CGG | 0.592999 | 6.3:-63509576 | None:intergenic |
TGTCATCTTAGGCAACCATA+GGG | 0.593560 | 6.3:+63510440 | MS.gene065608:CDS |
TCCTATGTATAAGTACATCA+AGG | 0.598253 | 6.3:+63516888 | MS.gene065608:CDS |
AATCGGTGGTCCTGTTGCCG+AGG | 0.598892 | 6.3:+63509527 | MS.gene065608:CDS |
ACAGACAAAGATGGTCTCCT+GGG | 0.599025 | 6.3:+63517447 | MS.gene065608:CDS |
ACCGGCAATGAAGGTATCAA+AGG | 0.599646 | 6.3:-63509471 | None:intergenic |
AAAACAGCCGCAAGTGTTTG+GGG | 0.606372 | 6.3:+63516634 | MS.gene065608:intron |
CCGATCTATAGGGTTGGACC+AGG | 0.606592 | 6.3:+63509576 | MS.gene065608:CDS |
GATGCACCGATCTATAGGGT+TGG | 0.607944 | 6.3:+63509570 | MS.gene065608:CDS |
GCTTCAGAACCTGCTATGTG+TGG | 0.609499 | 6.3:-63507560 | None:intergenic |
ATTATGCAATTGGGATGCTG+AGG | 0.609804 | 6.3:+63510794 | MS.gene065608:CDS |
CTTACCAAATGCTTATACCA+AGG | 0.615567 | 6.3:-63517474 | None:intergenic |
GTAGCACTAGCATGAAACCC+TGG | 0.625804 | 6.3:-63511208 | None:intergenic |
TGGCACTGCAGCACTACTTG+AGG | 0.628018 | 6.3:+63510497 | MS.gene065608:CDS |
AATGTTGACTCAGCAGTAGG+TGG | 0.630920 | 6.3:+63511184 | MS.gene065608:CDS |
TCGCCATCTTCACCTGACAC+CGG | 0.631389 | 6.3:-63509489 | None:intergenic |
TCACCACTACTAGCCCAACC+AGG | 0.632206 | 6.3:-63509402 | None:intergenic |
ACACCTGGTTGGGCTAGTAG+TGG | 0.633926 | 6.3:+63509399 | MS.gene065608:CDS |
GGAAGCTTCAGAAAAGAGGG+TGG | 0.641534 | 6.3:+63510751 | MS.gene065608:CDS |
TTTACCTTCAATTTAAGACA+AGG | 0.641990 | 6.3:+63507722 | MS.gene065608:CDS |
GGGGTGACAATGCTCAACAT+TGG | 0.643668 | 6.3:+63506417 | None:intergenic |
ATTGGAGATCCTACAACACC+TGG | 0.644431 | 6.3:+63509384 | MS.gene065608:CDS |
TAAAGAAGGTGCTATTGGAG+TGG | 0.647755 | 6.3:+63509251 | MS.gene065608:CDS |
ACTCAGCAGTAGGTGGACCA+GGG | 0.657840 | 6.3:+63511191 | MS.gene065608:CDS |
TACTAGACCCCAAACACTTG+CGG | 0.659154 | 6.3:-63516641 | None:intergenic |
TTATTCTGATGTGATAGATG+AGG | 0.659926 | 6.3:+63507763 | MS.gene065608:CDS |
AATTCTCAATCTCAGTTACA+CGG | 0.660759 | 6.3:+63509605 | MS.gene065608:CDS |
AACATCATAGGATGTTACAT+GGG | 0.671498 | 6.3:-63507639 | None:intergenic |
AAGATAATTAGATCAATCGG+TGG | 0.675973 | 6.3:+63509513 | MS.gene065608:CDS |
TGATGAATTTGTCAGCACCA+AGG | 0.677487 | 6.3:-63507687 | None:intergenic |
GGTTTATGTTAACTATGGAA+GGG | 0.678530 | 6.3:+63509122 | MS.gene065608:CDS |
GTGGTTCCAGTGAAGCAAAG+TGG | 0.679227 | 6.3:+63509301 | MS.gene065608:CDS |
GTTGCCGAGGATGATTGGCA+GGG | 0.687747 | 6.3:+63509540 | MS.gene065608:CDS |
ATGGGTTGGTATGTTACATG+AGG | 0.692744 | 6.3:-63507621 | None:intergenic |
AGACAAGGAAGCTATGAAGG+TGG | 0.693334 | 6.3:+63507737 | MS.gene065608:CDS |
TGAGTGTGAGAGACTATCAA+AGG | 0.718262 | 6.3:+63509422 | MS.gene065608:CDS |
GCCATGATTCTGCAGTACGT+AGG | 0.727975 | 6.3:-63519454 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr6.3 | gene | 63506426 | 63519528 | 63506426 | ID=MS.gene065608 |
chr6.3 | mRNA | 63506426 | 63519528 | 63506426 | ID=MS.gene065608.t1;Parent=MS.gene065608 |
chr6.3 | exon | 63506426 | 63506438 | 63506426 | ID=MS.gene065608.t1.exon1;Parent=MS.gene065608.t1 |
chr6.3 | CDS | 63506426 | 63506438 | 63506426 | ID=cds.MS.gene065608.t1;Parent=MS.gene065608.t1 |
chr6.3 | exon | 63507516 | 63507818 | 63507516 | ID=MS.gene065608.t1.exon2;Parent=MS.gene065608.t1 |
chr6.3 | CDS | 63507516 | 63507818 | 63507516 | ID=cds.MS.gene065608.t1;Parent=MS.gene065608.t1 |
chr6.3 | exon | 63509103 | 63509626 | 63509103 | ID=MS.gene065608.t1.exon3;Parent=MS.gene065608.t1 |
chr6.3 | CDS | 63509103 | 63509626 | 63509103 | ID=cds.MS.gene065608.t1;Parent=MS.gene065608.t1 |
chr6.3 | exon | 63510259 | 63510326 | 63510259 | ID=MS.gene065608.t1.exon4;Parent=MS.gene065608.t1 |
chr6.3 | CDS | 63510259 | 63510326 | 63510259 | ID=cds.MS.gene065608.t1;Parent=MS.gene065608.t1 |
chr6.3 | exon | 63510437 | 63510518 | 63510437 | ID=MS.gene065608.t1.exon5;Parent=MS.gene065608.t1 |
chr6.3 | CDS | 63510437 | 63510518 | 63510437 | ID=cds.MS.gene065608.t1;Parent=MS.gene065608.t1 |
chr6.3 | exon | 63510735 | 63510827 | 63510735 | ID=MS.gene065608.t1.exon6;Parent=MS.gene065608.t1 |
chr6.3 | CDS | 63510735 | 63510827 | 63510735 | ID=cds.MS.gene065608.t1;Parent=MS.gene065608.t1 |
chr6.3 | exon | 63511118 | 63511270 | 63511118 | ID=MS.gene065608.t1.exon7;Parent=MS.gene065608.t1 |
chr6.3 | CDS | 63511118 | 63511270 | 63511118 | ID=cds.MS.gene065608.t1;Parent=MS.gene065608.t1 |
chr6.3 | exon | 63511367 | 63511435 | 63511367 | ID=MS.gene065608.t1.exon8;Parent=MS.gene065608.t1 |
chr6.3 | CDS | 63511367 | 63511435 | 63511367 | ID=cds.MS.gene065608.t1;Parent=MS.gene065608.t1 |
chr6.3 | exon | 63511986 | 63512073 | 63511986 | ID=MS.gene065608.t1.exon9;Parent=MS.gene065608.t1 |
chr6.3 | CDS | 63511986 | 63512073 | 63511986 | ID=cds.MS.gene065608.t1;Parent=MS.gene065608.t1 |
chr6.3 | exon | 63515714 | 63515797 | 63515714 | ID=MS.gene065608.t1.exon10;Parent=MS.gene065608.t1 |
chr6.3 | CDS | 63515714 | 63515797 | 63515714 | ID=cds.MS.gene065608.t1;Parent=MS.gene065608.t1 |
chr6.3 | exon | 63516641 | 63516729 | 63516641 | ID=MS.gene065608.t1.exon11;Parent=MS.gene065608.t1 |
chr6.3 | CDS | 63516641 | 63516729 | 63516641 | ID=cds.MS.gene065608.t1;Parent=MS.gene065608.t1 |
chr6.3 | exon | 63516835 | 63516951 | 63516835 | ID=MS.gene065608.t1.exon12;Parent=MS.gene065608.t1 |
chr6.3 | CDS | 63516835 | 63516951 | 63516835 | ID=cds.MS.gene065608.t1;Parent=MS.gene065608.t1 |
chr6.3 | exon | 63517351 | 63517491 | 63517351 | ID=MS.gene065608.t1.exon13;Parent=MS.gene065608.t1 |
chr6.3 | CDS | 63517351 | 63517491 | 63517351 | ID=cds.MS.gene065608.t1;Parent=MS.gene065608.t1 |
chr6.3 | exon | 63519374 | 63519528 | 63519374 | ID=MS.gene065608.t1.exon14;Parent=MS.gene065608.t1 |
chr6.3 | CDS | 63519374 | 63519528 | 63519374 | ID=cds.MS.gene065608.t1;Parent=MS.gene065608.t1 |
Gene Sequence |
Protein sequence |