Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06570.t1 | XP_004502789.1 | 92.4 | 263 | 20 | 0 | 1 | 263 | 1 | 263 | 3.00E-129 | 471.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06570.t1 | Q9FLT9 | 58.9 | 258 | 97 | 2 | 5 | 262 | 10 | 258 | 2.0e-76 | 287.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06570.t1 | A0A1S2YDW5 | 92.4 | 263 | 20 | 0 | 1 | 263 | 1 | 263 | 2.2e-129 | 471.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049440 | MS.gene06570 | 0.884869 | 1.33E-71 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06570.t1 | MTR_3g093380 | 93.893 | 262 | 16 | 0 | 1 | 262 | 1 | 262 | 1.67e-175 | 486 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06570.t1 | AT5G24650 | 58.915 | 258 | 97 | 2 | 5 | 262 | 10 | 258 | 7.59e-104 | 304 |
| MS.gene06570.t1 | AT3G49560 | 56.175 | 251 | 101 | 2 | 9 | 259 | 19 | 260 | 2.43e-86 | 259 |
Find 90 sgRNAs with CRISPR-Local
Find 374 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCTGGAGGTCCTTTGATTC+AGG | 0.192480 | 3.2:+78397358 | MS.gene06570:CDS |
| CGTTACAAACACTTAGAAAA+TGG | 0.200233 | 3.2:+78397038 | MS.gene06570:CDS |
| GAGAGGAGGAGTGGGGATTG+TGG | 0.234756 | 3.2:+78401773 | MS.gene06570:CDS |
| TGCAGCATGGCGGCAGCTTT+TGG | 0.235154 | 3.2:+78399498 | MS.gene06570:intron |
| TAGAAAATGGTTTCAAGCTT+TGG | 0.285327 | 3.2:+78397051 | MS.gene06570:CDS |
| CGAGTTTGAATTTGGTCAAT+TGG | 0.290268 | 3.2:-78397017 | None:intergenic |
| CACGCTTCTCTCTCAAATCT+TGG | 0.317050 | 3.2:-78400910 | None:intergenic |
| ATGATATTGTAGGCTCTTGC+TGG | 0.319007 | 3.2:+78397341 | MS.gene06570:intron |
| ACTGCATTTCCTGCTTGATT+TGG | 0.323697 | 3.2:-78399561 | None:intergenic |
| GAAGAAGGGAGAGGAGGAGT+GGG | 0.341832 | 3.2:+78401765 | MS.gene06570:CDS |
| GTTTGTAACGAGTTTGAATT+TGG | 0.348045 | 3.2:-78397025 | None:intergenic |
| AGAGGAGGAGTGGGGATTGT+GGG | 0.348060 | 3.2:+78401774 | MS.gene06570:CDS |
| TGCCGCTATTGGTGCTTTCA+TGG | 0.355015 | 3.2:+78397136 | MS.gene06570:CDS |
| GCCGCTCAAGGTGCCGCTAT+TGG | 0.367727 | 3.2:+78397125 | MS.gene06570:CDS |
| GGAGGAAGAGAGGGCGATGA+TGG | 0.380669 | 3.2:+78401711 | MS.gene06570:CDS |
| GTGGTCAAGAATCAAAAGTC+TGG | 0.392608 | 3.2:-78400799 | None:intergenic |
| CTATTCTTTGCACTCGTTCA+AGG | 0.398995 | 3.2:+78399594 | MS.gene06570:CDS |
| AGAAGAAGGGAGAGGAGGAG+TGG | 0.407966 | 3.2:+78401764 | MS.gene06570:CDS |
| GAGGAAGAGAGGGCGATGAT+GGG | 0.412907 | 3.2:+78401712 | MS.gene06570:CDS |
| GCAGGAAATGCAGTCACATC+TGG | 0.415380 | 3.2:+78399570 | MS.gene06570:CDS |
| AGCGGCACCTTGAGCGGCGC+TGG | 0.419336 | 3.2:-78397120 | None:intergenic |
| GAGTTTGAATTTGGTCAATT+GGG | 0.427360 | 3.2:-78397016 | None:intergenic |
| GGCTTCTCTTCAACAAGCAC+AGG | 0.449575 | 3.2:+78397232 | MS.gene06570:CDS |
| GAAGAGAAGCCATGGCTTGA+GGG | 0.462480 | 3.2:-78397220 | None:intergenic |
| GCCGCTATTGGTGCTTTCAT+GGG | 0.474538 | 3.2:+78397137 | MS.gene06570:CDS |
| GAAAGGAAGATGTTCAATCT+AGG | 0.476299 | 3.2:+78397447 | MS.gene06570:CDS |
| ACCAATAGCGGCACCTTGAG+CGG | 0.478375 | 3.2:-78397126 | None:intergenic |
| GGGGAGAGGCGAAACGGTGG+CGG | 0.480646 | 3.2:+78401732 | MS.gene06570:CDS |
| GAGAGGCGAAACGGTGGCGG+CGG | 0.482752 | 3.2:+78401735 | MS.gene06570:CDS |
| TGAGGGTTAAGAGAAGCATT+AGG | 0.484112 | 3.2:-78397203 | None:intergenic |
| AGGAAGAGAGGGCGATGATG+GGG | 0.486664 | 3.2:+78401713 | MS.gene06570:CDS |
| CGGCAGCTGCGAGATGATGA+TGG | 0.495337 | 3.2:+78401689 | MS.gene06570:CDS |
| GCTTTCATGGGTACTCTCAC+CGG | 0.501511 | 3.2:+78397149 | MS.gene06570:CDS |
| GGCGGCGGCGACGAAGAAGA+AGG | 0.503423 | 3.2:+78401750 | MS.gene06570:CDS |
| GAAGCATTAGGCGGTGGAGT+TGG | 0.513779 | 3.2:-78397191 | None:intergenic |
| GATGATGGGGAGAGGCGAAA+CGG | 0.516939 | 3.2:+78401726 | MS.gene06570:CDS |
| GAGAGGGCGATGATGGGGAG+AGG | 0.517268 | 3.2:+78401718 | MS.gene06570:CDS |
| AAGAAGGGAGAGGAGGAGTG+GGG | 0.517559 | 3.2:+78401766 | MS.gene06570:CDS |
| AGAATCAAAAGTCTGGGTCC+TGG | 0.519605 | 3.2:-78400792 | None:intergenic |
| GCATAGTGAGTATCTTCAGC+AGG | 0.520197 | 3.2:-78400542 | None:intergenic |
| GAGGTCCTTTGATTCAGGCT+CGG | 0.526552 | 3.2:+78397363 | MS.gene06570:CDS |
| TTCTCTTAACCCTCAAGCCA+TGG | 0.531805 | 3.2:+78397211 | MS.gene06570:CDS |
| AGTGACGACGGCGGCTTCAA+CGG | 0.534169 | 3.2:-78397093 | None:intergenic |
| TTTGAAAAGGTTGAGAGGAA+AGG | 0.538369 | 3.2:+78397430 | MS.gene06570:CDS |
| GACGGCGGCTTCAACGGCAA+TGG | 0.539945 | 3.2:-78397087 | None:intergenic |
| AAATTCCGAGCCTGAATCAA+AGG | 0.541754 | 3.2:-78397368 | None:intergenic |
| TGAAGAGAAGCCATGGCTTG+AGG | 0.543694 | 3.2:-78397221 | None:intergenic |
| GGCACCTTGAGCGGCGCTGG+TGG | 0.544497 | 3.2:-78397117 | None:intergenic |
| AGAAACATGTTGCAAAACCT+TGG | 0.547455 | 3.2:+78400572 | MS.gene06570:CDS |
| AAAATGGAACAAGGAAAGCA+AGG | 0.552828 | 3.2:+78396954 | None:intergenic |
| TTCTTTGCACTCGTTCAAGG+TGG | 0.553419 | 3.2:+78399597 | MS.gene06570:CDS |
| ACCACTTACCAACGAAAACA+TGG | 0.554052 | 3.2:-78399529 | None:intergenic |
| TTAAGAGAAGCATTAGGCGG+TGG | 0.554987 | 3.2:-78397197 | None:intergenic |
| CTTTGCCTCTACTCAATGAC+AGG | 0.556049 | 3.2:+78400645 | MS.gene06570:CDS |
| CAAGGAGCAATGGTGTTGAA+AGG | 0.560406 | 3.2:+78396972 | MS.gene06570:CDS |
| GGCGACGAAGAAGAAGGGAG+AGG | 0.561810 | 3.2:+78401756 | MS.gene06570:CDS |
| TCATTCCCTACCTATGGATG+TGG | 0.562301 | 3.2:-78400818 | None:intergenic |
| TCTTTGCACTCGTTCAAGGT+GGG | 0.562699 | 3.2:+78399598 | MS.gene06570:CDS |
| TGATTCTTGACCACATCCAT+AGG | 0.564371 | 3.2:+78400808 | MS.gene06570:CDS |
| GGCAGCTGCGAGATGATGAT+GGG | 0.567162 | 3.2:+78401690 | MS.gene06570:CDS |
| GCGGCGGCGACGAAGAAGAA+GGG | 0.569985 | 3.2:+78401751 | MS.gene06570:CDS |
| ATGATGATGGGAGGAAGAGA+GGG | 0.570217 | 3.2:+78401702 | MS.gene06570:CDS |
| GATGATGATGGGAGGAAGAG+AGG | 0.570863 | 3.2:+78401701 | MS.gene06570:CDS |
| TGCTTGTTGAAGAGAAGCCA+TGG | 0.570983 | 3.2:-78397228 | None:intergenic |
| GTTATGACCGGAGTGAATGC+TGG | 0.579346 | 3.2:+78397395 | MS.gene06570:CDS |
| TGGTCAAGAATCAAAAGTCT+GGG | 0.579852 | 3.2:-78400798 | None:intergenic |
| GACGAAGAAGAAGGGAGAGG+AGG | 0.585768 | 3.2:+78401759 | MS.gene06570:CDS |
| ACAAGGAAAGCAAGGAGCAA+TGG | 0.598205 | 3.2:+78396962 | MS.gene06570:CDS |
| ACTACCACCAGCGCCGCTCA+AGG | 0.598244 | 3.2:+78397113 | MS.gene06570:CDS |
| AGAGATGTGAAAATTCCTCC+AGG | 0.598994 | 3.2:+78400774 | MS.gene06570:CDS |
| ATGGGTGGACCAAATCAAGC+AGG | 0.603273 | 3.2:+78399552 | MS.gene06570:CDS |
| GATGGGGAGAGGCGAAACGG+TGG | 0.604093 | 3.2:+78401729 | MS.gene06570:CDS |
| AAAAGCGGAAGATGCATCAC+CGG | 0.604200 | 3.2:-78397168 | None:intergenic |
| ATATTGTAGGCTCTTGCTGG+AGG | 0.609110 | 3.2:+78397344 | MS.gene06570:intron |
| TCGTTGGTAAGTGGTATGGG+TGG | 0.609634 | 3.2:+78399537 | MS.gene06570:CDS |
| TCTCGTAATTCTGAAGACCA+AGG | 0.621324 | 3.2:-78400589 | None:intergenic |
| TCCTACCTGTCATTGAGTAG+AGG | 0.629468 | 3.2:-78400650 | None:intergenic |
| AGGCGGTGGAGTTGGAAAAG+CGG | 0.634509 | 3.2:-78397183 | None:intergenic |
| ACCCATGAAAGCACCAATAG+CGG | 0.640706 | 3.2:-78397138 | None:intergenic |
| CAAGATTTGAGAGAGAAGCG+TGG | 0.647885 | 3.2:+78400911 | MS.gene06570:CDS |
| GGCGCTGGTGGTAGTGACGA+CGG | 0.652693 | 3.2:-78397105 | None:intergenic |
| AGCTGCGAGATGATGATGGG+AGG | 0.659347 | 3.2:+78401693 | MS.gene06570:CDS |
| TTCGATGGAATAGTTTACGA+CGG | 0.661466 | 3.2:+78401669 | MS.gene06570:CDS |
| AGTAATACCAGCATTCACTC+CGG | 0.663197 | 3.2:-78397402 | None:intergenic |
| TAGTGAGTATCTTCAGCAGG+TGG | 0.670063 | 3.2:-78400539 | None:intergenic |
| ATCAAAAGTCTGGGTCCTGG+AGG | 0.677468 | 3.2:-78400789 | None:intergenic |
| AAATTCAAGAAAATGGAACA+AGG | 0.680356 | 3.2:+78396945 | None:intergenic |
| GGGTTAAGAGAAGCATTAGG+CGG | 0.704564 | 3.2:-78397200 | None:intergenic |
| AATTATTTATTGCAGCATGG+CGG | 0.719549 | 3.2:+78399488 | MS.gene06570:intron |
| GCTGGTGGTAGTGACGACGG+CGG | 0.763415 | 3.2:-78397102 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CAACAAAAATTAAAAAAATT+AGG | - | chr3.2:78397294-78397313 | None:intergenic | 10.0% |
| !! | TGATTATTAACAAATTATTT+GGG | + | chr3.2:78400321-78400340 | MS.gene06570:intron | 10.0% |
| !! | TTGATTATTAACAAATTATT+TGG | + | chr3.2:78400320-78400339 | MS.gene06570:intron | 10.0% |
| !!! | ATATTAATTACAATCTTTTT+AGG | - | chr3.2:78398657-78398676 | None:intergenic | 10.0% |
| !!! | TTTATATATTAAAAGGTTTT+AGG | + | chr3.2:78398697-78398716 | MS.gene06570:intron | 10.0% |
| !! | AAAATGTTTACATCTTTAAA+TGG | - | chr3.2:78399964-78399983 | None:intergenic | 15.0% |
| !! | AAATGTTTACATCTTTAAAT+GGG | - | chr3.2:78399963-78399982 | None:intergenic | 15.0% |
| !! | AATAGTTTAGTGTTAATAAT+TGG | - | chr3.2:78397583-78397602 | None:intergenic | 15.0% |
| !! | ATAAATATTGCATAAATTGA+TGG | + | chr3.2:78398319-78398338 | MS.gene06570:intron | 15.0% |
| !! | ATATTATAACAACATAGATT+AGG | - | chr3.2:78398165-78398184 | None:intergenic | 15.0% |
| !! | ATTGTTAAAAAATTTAGACA+TGG | + | chr3.2:78400372-78400391 | MS.gene06570:intron | 15.0% |
| !! | ATTTATAAGTCAATATAAGA+TGG | + | chr3.2:78399158-78399177 | MS.gene06570:intron | 15.0% |
| !! | CAATTTATGCAATATTTATT+TGG | - | chr3.2:78398318-78398337 | None:intergenic | 15.0% |
| !! | GTAAAATAAATTCTATACAT+TGG | - | chr3.2:78399989-78400008 | None:intergenic | 15.0% |
| !! | TGTTAAAAATAAAAAGACTA+TGG | + | chr3.2:78401235-78401254 | MS.gene06570:intron | 15.0% |
| !!! | AAGTTTGAAATTTAATATTG+AGG | - | chr3.2:78399201-78399220 | None:intergenic | 15.0% |
| !!! | ATTAGTTTTAATTTGTTCTT+GGG | + | chr3.2:78397800-78397819 | MS.gene06570:intron | 15.0% |
| !!! | TATTTTCATAAACTCTAAAA+AGG | - | chr3.2:78398363-78398382 | None:intergenic | 15.0% |
| !!! | TGACAGTTATTTTAAAAAAT+CGG | - | chr3.2:78400113-78400132 | None:intergenic | 15.0% |
| !!! | TGTCTAAATTTTTTAACAAT+AGG | - | chr3.2:78400372-78400391 | None:intergenic | 15.0% |
| !! | AAAATTTAGACATGGTTTAT+TGG | + | chr3.2:78400380-78400399 | MS.gene06570:intron | 20.0% |
| !! | AAGAGAAAAGAAGAAAAATT+AGG | - | chr3.2:78397486-78397505 | None:intergenic | 20.0% |
| !! | CAAGAACAAATTAAAACTAA+TGG | - | chr3.2:78397801-78397820 | None:intergenic | 20.0% |
| !! | GACATTCCTTTATAAAAATT+TGG | - | chr3.2:78400241-78400260 | None:intergenic | 20.0% |
| !! | GCAGTTTATTTGATAAAATT+TGG | + | chr3.2:78401066-78401085 | MS.gene06570:intron | 20.0% |
| !! | TGTTACTGTTAAAATTATAG+GGG | + | chr3.2:78398562-78398581 | MS.gene06570:intron | 20.0% |
| !! | TTGTTGAATTTCAAAAGTTA+GGG | + | chr3.2:78397308-78397327 | MS.gene06570:intron | 20.0% |
| !! | TTTGTTGAATTTCAAAAGTT+AGG | + | chr3.2:78397307-78397326 | MS.gene06570:intron | 20.0% |
| !!! | AGTTATTAATGTCAGATTTT+TGG | + | chr3.2:78399855-78399874 | MS.gene06570:intron | 20.0% |
| !!! | ATGGTATATTTTCATGTATT+AGG | + | chr3.2:78398875-78398894 | MS.gene06570:intron | 20.0% |
| !!! | CATTAGTTTTAATTTGTTCT+TGG | + | chr3.2:78397799-78397818 | MS.gene06570:intron | 20.0% |
| !!! | GTGTTACTGTTAAAATTATA+GGG | + | chr3.2:78398561-78398580 | MS.gene06570:intron | 20.0% |
| !!! | TGTATTTCCGATTTTTATTT+TGG | + | chr3.2:78400446-78400465 | MS.gene06570:intron | 20.0% |
| !!! | TGTGTTACTGTTAAAATTAT+AGG | + | chr3.2:78398560-78398579 | MS.gene06570:intron | 20.0% |
| !!! | TTTGTTGTTTATGATATTGT+AGG | + | chr3.2:78397331-78397350 | MS.gene06570:intron | 20.0% |
| ! | AAGTACTTTAAGTCAATCAA+TGG | - | chr3.2:78400721-78400740 | None:intergenic | 25.0% |
| ! | AATATTGCATAAATTGATGG+AGG | + | chr3.2:78398322-78398341 | MS.gene06570:intron | 25.0% |
| ! | ACGTGGCAAAATTAAATTTA+AGG | + | chr3.2:78401410-78401429 | MS.gene06570:intron | 25.0% |
| ! | ATAAGATAAGTCATTGTTTG+TGG | + | chr3.2:78401168-78401187 | MS.gene06570:intron | 25.0% |
| ! | ATACATATAACAACGAATCT+AGG | - | chr3.2:78400431-78400450 | None:intergenic | 25.0% |
| ! | ATAGTCCCTAAACTTAAATA+GGG | + | chr3.2:78398042-78398061 | MS.gene06570:intron | 25.0% |
| ! | ATCTAATTCAGATTTGTGTT+TGG | + | chr3.2:78401626-78401645 | MS.gene06570:intron | 25.0% |
| ! | CGTGGCAAAATTAAATTTAA+GGG | + | chr3.2:78401411-78401430 | MS.gene06570:intron | 25.0% |
| ! | CTTAAATTCATGTCAAGTTA+AGG | + | chr3.2:78399012-78399031 | MS.gene06570:intron | 25.0% |
| ! | GTCAAATACTCAATTCATAT+TGG | + | chr3.2:78400129-78400148 | MS.gene06570:intron | 25.0% |
| ! | TACAATTATTTATTGCAGCA+TGG | + | chr3.2:78399485-78399504 | MS.gene06570:intron | 25.0% |
| ! | TATACATTAATCATGCAGAT+AGG | + | chr3.2:78400500-78400519 | MS.gene06570:intron | 25.0% |
| ! | TCAATGGTAAACAAAATAAG+TGG | - | chr3.2:78400705-78400724 | None:intergenic | 25.0% |
| ! | TGAAAATTCACTTCCATTAA+CGG | - | chr3.2:78401287-78401306 | None:intergenic | 25.0% |
| ! | TTATATTTACCAAGTCAACT+GGG | + | chr3.2:78399809-78399828 | MS.gene06570:intron | 25.0% |
| ! | TTCATCTACAATAAATCTGT+TGG | - | chr3.2:78399315-78399334 | None:intergenic | 25.0% |
| ! | TTTAATATAATCACACGTGT+TGG | + | chr3.2:78397697-78397716 | MS.gene06570:intron | 25.0% |
| !! | AATGTAAAACTAGTTTACAC+TGG | + | chr3.2:78400157-78400176 | MS.gene06570:intron | 25.0% |
| !! | AGACTTTTTAATAGCCTTTT+AGG | + | chr3.2:78400210-78400229 | MS.gene06570:intron | 25.0% |
| !! | ATCATCTCATTTGTGTTATT+TGG | + | chr3.2:78398983-78399002 | MS.gene06570:intron | 25.0% |
| !! | ATGATTTATTTGACCCTTTT+AGG | - | chr3.2:78398938-78398957 | None:intergenic | 25.0% |
| !! | ATTTTTATAAAGGAATGTCC+AGG | + | chr3.2:78400242-78400261 | MS.gene06570:intron | 25.0% |
| !! | CAAATAAATCATGATAGTGT+GGG | + | chr3.2:78398946-78398965 | MS.gene06570:intron | 25.0% |
| !! | GCTATGCCAAATTTTTATAA+AGG | + | chr3.2:78400232-78400251 | MS.gene06570:intron | 25.0% |
| !! | GTACTACTACAAGATTATTT+TGG | - | chr3.2:78399674-78399693 | None:intergenic | 25.0% |
| !! | TATAGTTTAAGACATGCTAT+GGG | - | chr3.2:78400484-78400503 | None:intergenic | 25.0% |
| !! | TATTTATTTGGCTTACACTA+AGG | - | chr3.2:78398306-78398325 | None:intergenic | 25.0% |
| !! | TCAAATAAATCATGATAGTG+TGG | + | chr3.2:78398945-78398964 | MS.gene06570:intron | 25.0% |
| !! | TCATCACCATTTTATGTTAT+TGG | + | chr3.2:78399085-78399104 | MS.gene06570:intron | 25.0% |
| !! | TCTTTCATCTAAAACCTAAA+TGG | - | chr3.2:78401391-78401410 | None:intergenic | 25.0% |
| !! | TGCTATAATTTTGTGAATTG+TGG | + | chr3.2:78397830-78397849 | MS.gene06570:intron | 25.0% |
| !! | TTTCATCGAATTTTCTATGT+TGG | + | chr3.2:78397255-78397274 | MS.gene06570:intron | 25.0% |
| !! | TTTTCTCTTTCTTGTATGTT+TGG | + | chr3.2:78397497-78397516 | MS.gene06570:intron | 25.0% |
| !!! | AAATATACCATCTTTTGAGA+AGG | - | chr3.2:78398866-78398885 | None:intergenic | 25.0% |
| !!! | AATATACCATCTTTTGAGAA+GGG | - | chr3.2:78398865-78398884 | None:intergenic | 25.0% |
| !!! | GCATTTTTCAATTTTCATGT+TGG | + | chr3.2:78400278-78400297 | MS.gene06570:intron | 25.0% |
| !!! | GTATTACTTGTGTTTTGAAA+AGG | + | chr3.2:78397417-78397436 | MS.gene06570:CDS | 25.0% |
| !!! | TAAAACCTAAATGGACTAAA+TGG | - | chr3.2:78401382-78401401 | None:intergenic | 25.0% |
| !!! | TACGAGAAGAATTTTAAGAA+AGG | + | chr3.2:78400605-78400624 | MS.gene06570:CDS | 25.0% |
| !!! | TTTGATTTTGTAGATTTCGA+TGG | + | chr3.2:78401654-78401673 | MS.gene06570:intron | 25.0% |
| AAAATTTGGCATAGCCTAAA+AGG | - | chr3.2:78400227-78400246 | None:intergenic | 30.0% | |
| AACCCACTAATAGTAGAATA+AGG | - | chr3.2:78398782-78398801 | None:intergenic | 30.0% | |
| AAGACACATCAATGATAACA+AGG | - | chr3.2:78399441-78399460 | None:intergenic | 30.0% | |
| AATTATTTATTGCAGCATGG+CGG | + | chr3.2:78399488-78399507 | MS.gene06570:intron | 30.0% | |
| ACCAGACCAATAACATAAAA+TGG | - | chr3.2:78399094-78399113 | None:intergenic | 30.0% | |
| AGAAAAGGGAAATGAAAGAA+AGG | + | chr3.2:78398019-78398038 | MS.gene06570:intron | 30.0% | |
| AGCAATATGATAGTAAGTCA+TGG | - | chr3.2:78400067-78400086 | None:intergenic | 30.0% | |
| AGTCTATCTTGAAAGAGAAA+AGG | - | chr3.2:78400195-78400214 | None:intergenic | 30.0% | |
| ATGTTTACCACTGATGAAAT+GGG | - | chr3.2:78399698-78399717 | None:intergenic | 30.0% | |
| CGTTACAAACACTTAGAAAA+TGG | + | chr3.2:78397038-78397057 | MS.gene06570:CDS | 30.0% | |
| CTTATATTTACCAAGTCAAC+TGG | + | chr3.2:78399808-78399827 | MS.gene06570:intron | 30.0% | |
| GAGTTTGAATTTGGTCAATT+GGG | - | chr3.2:78397019-78397038 | None:intergenic | 30.0% | |
| GATAGTCCCTAAACTTAAAT+AGG | + | chr3.2:78398041-78398060 | MS.gene06570:intron | 30.0% | |
| GCTATGTAAAATACAAGCTT+GGG | + | chr3.2:78399831-78399850 | MS.gene06570:intron | 30.0% | |
| GTACTCAAAAATTGTATTGG+AGG | + | chr3.2:78398106-78398125 | MS.gene06570:intron | 30.0% | |
| GTTTGTAACGAGTTTGAATT+TGG | - | chr3.2:78397028-78397047 | None:intergenic | 30.0% | |
| TAATCAACAAACATTCACTG+AGG | - | chr3.2:78400307-78400326 | None:intergenic | 30.0% | |
| TAGAAAATGGTTTCAAGCTT+TGG | + | chr3.2:78397051-78397070 | MS.gene06570:CDS | 30.0% | |
| TAGTCCCTAAACTTAAATAG+GGG | + | chr3.2:78398043-78398062 | MS.gene06570:intron | 30.0% | |
| TATGTTTACCACTGATGAAA+TGG | - | chr3.2:78399699-78399718 | None:intergenic | 30.0% | |
| TGAGAAAACTCAATATCTCA+AGG | - | chr3.2:78398398-78398417 | None:intergenic | 30.0% | |
| TTAGGTTAACAACTGTTAAG+AGG | + | chr3.2:78398715-78398734 | MS.gene06570:intron | 30.0% | |
| TTCATTGTATTTCCTCGTTA+AGG | + | chr3.2:78398748-78398767 | MS.gene06570:intron | 30.0% | |
| TTGTGGTTTAGTTGAATAAC+TGG | + | chr3.2:78397847-78397866 | MS.gene06570:intron | 30.0% | |
| ! | AAACCCCCTATTTAAGTTTA+GGG | - | chr3.2:78398050-78398069 | None:intergenic | 30.0% |
| ! | AATATAAGATGGAGTATCAC+TGG | + | chr3.2:78399169-78399188 | MS.gene06570:intron | 30.0% |
| ! | ACCATTTTATGTTATTGGTC+TGG | + | chr3.2:78399090-78399109 | MS.gene06570:intron | 30.0% |
| ! | AGCTTTAGCAATTAAGAGTA+TGG | - | chr3.2:78400872-78400891 | None:intergenic | 30.0% |
| ! | ATATTTCAATACACTTGGTG+TGG | + | chr3.2:78399128-78399147 | MS.gene06570:intron | 30.0% |
| ! | GAGGTACTCAAAAATTGTAT+TGG | + | chr3.2:78398103-78398122 | MS.gene06570:intron | 30.0% |
| ! | GTATAGTTTAAGACATGCTA+TGG | - | chr3.2:78400485-78400504 | None:intergenic | 30.0% |
| ! | TAAATGGAGCATTACCTAAA+TGG | - | chr3.2:78401366-78401385 | None:intergenic | 30.0% |
| ! | TGAAAATGAATTTGCTCTTG+TGG | + | chr3.2:78399331-78399350 | MS.gene06570:intron | 30.0% |
| ! | TGCCTTATTCTACTATTAGT+GGG | + | chr3.2:78398777-78398796 | MS.gene06570:intron | 30.0% |
| ! | TGTATGTTTGGTTTACTTGT+GGG | + | chr3.2:78397509-78397528 | MS.gene06570:intron | 30.0% |
| ! | TTGCCTTATTCTACTATTAG+TGG | + | chr3.2:78398776-78398795 | MS.gene06570:intron | 30.0% |
| ! | TTGTATGTTTGGTTTACTTG+TGG | + | chr3.2:78397508-78397527 | MS.gene06570:intron | 30.0% |
| !! | ATTCTACTATTAGTGGGTTT+GGG | + | chr3.2:78398783-78398802 | MS.gene06570:intron | 30.0% |
| !! | CTCATTTGTGTTATTTGGTT+TGG | + | chr3.2:78398988-78399007 | MS.gene06570:intron | 30.0% |
| !! | TATTCTACTATTAGTGGGTT+TGG | + | chr3.2:78398782-78398801 | MS.gene06570:intron | 30.0% |
| !! | TTTTGTTTGTGAGTTTAGAG+AGG | - | chr3.2:78398283-78398302 | None:intergenic | 30.0% |
| !!! | ATCTGAACTCTTTTTTAGGA+GGG | - | chr3.2:78401338-78401357 | None:intergenic | 30.0% |
| !!! | GAGATTTTTTTTGAACCATG+AGG | + | chr3.2:78398609-78398628 | MS.gene06570:intron | 30.0% |
| !!! | GCATATCTGAACTCTTTTTT+AGG | - | chr3.2:78401342-78401361 | None:intergenic | 30.0% |
| !!! | GTGATGCTTTTGGTTTAAAT+CGG | + | chr3.2:78399353-78399372 | MS.gene06570:intron | 30.0% |
| !!! | TATCTGAACTCTTTTTTAGG+AGG | - | chr3.2:78401339-78401358 | None:intergenic | 30.0% |
| AAAGCTAAAGTCTGTCTTCA+GGG | + | chr3.2:78400886-78400905 | MS.gene06570:intron | 35.0% | |
| AAATTATAGGGGATTCAGTC+AGG | + | chr3.2:78398573-78398592 | MS.gene06570:intron | 35.0% | |
| AAGACATGCTATGGGTTTAA+GGG | - | chr3.2:78400476-78400495 | None:intergenic | 35.0% | |
| AAGGCAAATAATCCTTAACG+AGG | - | chr3.2:78398763-78398782 | None:intergenic | 35.0% | |
| AATTATAGGGGATTCAGTCA+GGG | + | chr3.2:78398574-78398593 | MS.gene06570:intron | 35.0% | |
| ACACAACATAGATTTGGCAT+AGG | - | chr3.2:78399784-78399803 | None:intergenic | 35.0% | |
| AGAAACATGTTGCAAAACCT+TGG | + | chr3.2:78400572-78400591 | MS.gene06570:CDS | 35.0% | |
| AGAAACCTCATCTTGCAATA+AGG | - | chr3.2:78400034-78400053 | None:intergenic | 35.0% | |
| AGCCTTACACAACATAGATT+TGG | - | chr3.2:78399790-78399809 | None:intergenic | 35.0% | |
| AGTCCCTAAACTTAAATAGG+GGG | + | chr3.2:78398044-78398063 | MS.gene06570:intron | 35.0% | |
| AGTTCAGATATGCTCCATTT+AGG | + | chr3.2:78401349-78401368 | MS.gene06570:intron | 35.0% | |
| ATAGCATTAGCAACCGTTAA+TGG | + | chr3.2:78401271-78401290 | MS.gene06570:intron | 35.0% | |
| ATCTTGCAATAAGGCTTTCA+AGG | - | chr3.2:78400025-78400044 | None:intergenic | 35.0% | |
| ATGCTCCATTTAGTCCATTT+AGG | + | chr3.2:78401374-78401393 | MS.gene06570:intron | 35.0% | |
| ATGGGGTCAAAAGCAAATTA+TGG | + | chr3.2:78401123-78401142 | MS.gene06570:intron | 35.0% | |
| ATTGTATTGGAGGAGGATTT+CGG | + | chr3.2:78398116-78398135 | MS.gene06570:intron | 35.0% | |
| CAAAAGCAAATTATGGTGCA+TGG | + | chr3.2:78401130-78401149 | MS.gene06570:intron | 35.0% | |
| CACAACATAGATTTGGCATA+GGG | - | chr3.2:78399783-78399802 | None:intergenic | 35.0% | |
| CGAGTTTGAATTTGGTCAAT+TGG | - | chr3.2:78397020-78397039 | None:intergenic | 35.0% | |
| CTCAAAAATTGTATTGGAGG+AGG | + | chr3.2:78398109-78398128 | MS.gene06570:intron | 35.0% | |
| GAAAGGAAGATGTTCAATCT+AGG | + | chr3.2:78397447-78397466 | MS.gene06570:CDS | 35.0% | |
| GACGCATATTTCAATACACT+TGG | + | chr3.2:78399123-78399142 | MS.gene06570:intron | 35.0% | |
| GAGCGTTAAGAAATAGGAAA+TGG | - | chr3.2:78399395-78399414 | None:intergenic | 35.0% | |
| GATTAGATCAGAACAGATGA+CGG | - | chr3.2:78401609-78401628 | None:intergenic | 35.0% | |
| GGCTATGTAAAATACAAGCT+TGG | + | chr3.2:78399830-78399849 | MS.gene06570:intron | 35.0% | |
| GTAAACATAAATGCTGCACT+AGG | + | chr3.2:78399710-78399729 | MS.gene06570:intron | 35.0% | |
| GTTAACAACTGTTAAGAGGA+GGG | + | chr3.2:78398719-78398738 | MS.gene06570:intron | 35.0% | |
| TAAAGCTAAAGTCTGTCTTC+AGG | + | chr3.2:78400885-78400904 | MS.gene06570:intron | 35.0% | |
| TAAGACATGCTATGGGTTTA+AGG | - | chr3.2:78400477-78400496 | None:intergenic | 35.0% | |
| TACAAAACATCCCCTCAAAA+TGG | + | chr3.2:78398081-78398100 | MS.gene06570:intron | 35.0% | |
| TATTGCAAGATGAGGTTTCT+CGG | + | chr3.2:78400034-78400053 | MS.gene06570:intron | 35.0% | |
| TGCCAAATCTATGTTGTGTA+AGG | + | chr3.2:78399785-78399804 | MS.gene06570:intron | 35.0% | |
| TGGTAAGATTGTCCAAATAC+CGG | - | chr3.2:78399295-78399314 | None:intergenic | 35.0% | |
| TGGTCAAGAATCAAAAGTCT+GGG | - | chr3.2:78400801-78400820 | None:intergenic | 35.0% | |
| TGTTTACCACTGATGAAATG+GGG | - | chr3.2:78399697-78399716 | None:intergenic | 35.0% | |
| TTCGATGGAATAGTTTACGA+CGG | + | chr3.2:78401669-78401688 | MS.gene06570:CDS | 35.0% | |
| TTTGAAAAGGTTGAGAGGAA+AGG | + | chr3.2:78397430-78397449 | MS.gene06570:CDS | 35.0% | |
| TTTGTGAGTTTAGAGAGGAA+GGG | - | chr3.2:78398278-78398297 | None:intergenic | 35.0% | |
| ! | AGTGGTGAAAAGCATAGTAT+AGG | + | chr3.2:78400980-78400999 | MS.gene06570:intron | 35.0% |
| ! | ATCATCATCTCTTTTCCTCA+TGG | - | chr3.2:78398627-78398646 | None:intergenic | 35.0% |
| ! | ATCCATCGAAAAAGTCTTGT+AGG | + | chr3.2:78399880-78399899 | MS.gene06570:intron | 35.0% |
| ! | CAAACCCCCTATTTAAGTTT+AGG | - | chr3.2:78398051-78398070 | None:intergenic | 35.0% |
| ! | GCTTTTCACCACTTATAGTT+CGG | - | chr3.2:78400973-78400992 | None:intergenic | 35.0% |
| ! | GTGGTGAAAAGCATAGTATA+GGG | + | chr3.2:78400981-78401000 | MS.gene06570:intron | 35.0% |
| ! | TCCATCGAAAAAGTCTTGTA+GGG | + | chr3.2:78399881-78399900 | MS.gene06570:intron | 35.0% |
| ! | TGAGTAGAGCGTTAAGAAAT+AGG | - | chr3.2:78399401-78399420 | None:intergenic | 35.0% |
| ! | TTTGAGTACCTCCATTTTGA+GGG | - | chr3.2:78398095-78398114 | None:intergenic | 35.0% |
| !! | GGGGGTACCAAAATAAAAAT+CGG | - | chr3.2:78400456-78400475 | None:intergenic | 35.0% |
| !! | TTTTCGTTGGTAAGTGGTAT+GGG | + | chr3.2:78399534-78399553 | MS.gene06570:CDS | 35.0% |
| !! | TTTTGAGTACCTCCATTTTG+AGG | - | chr3.2:78398096-78398115 | None:intergenic | 35.0% |
| !!! | ATTGGGTTTTGAAGTTGTTG+TGG | - | chr3.2:78397002-78397021 | None:intergenic | 35.0% |
| !!! | TACAAGACTTTTTCGATGGA+TGG | - | chr3.2:78399881-78399900 | None:intergenic | 35.0% |
| !!! | TAGGTTTTAGATGAAAGACG+TGG | + | chr3.2:78401393-78401412 | MS.gene06570:intron | 35.0% |
| !!! | TCTGAACTCTTTTTTAGGAG+GGG | - | chr3.2:78401337-78401356 | None:intergenic | 35.0% |
| !!! | TGTGTTTTGAAAAGGTTGAG+AGG | + | chr3.2:78397425-78397444 | MS.gene06570:CDS | 35.0% |
| AAAACATCCCCTCAAAATGG+AGG | + | chr3.2:78398084-78398103 | MS.gene06570:intron | 40.0% | |
| AAATTCCGAGCCTGAATCAA+AGG | - | chr3.2:78397371-78397390 | None:intergenic | 40.0% | |
| AAGCACCACAGTTAATCACA+CGG | + | chr3.2:78401464-78401483 | MS.gene06570:intron | 40.0% | |
| AATGCAAGACACATAAGACC+TGG | - | chr3.2:78400263-78400282 | None:intergenic | 40.0% | |
| ACAGGACAGATTGCCTAAAA+GGG | + | chr3.2:78398922-78398941 | MS.gene06570:intron | 40.0% | |
| ACATAGATTTGGCATAGGGT+AGG | - | chr3.2:78399779-78399798 | None:intergenic | 40.0% | |
| ACCACTTACCAACGAAAACA+TGG | - | chr3.2:78399532-78399551 | None:intergenic | 40.0% | |
| ACGTAATAGCAGAAGACAGA+AGG | - | chr3.2:78401508-78401527 | None:intergenic | 40.0% | |
| ACTACTCACTATGACTCCAA+GGG | - | chr3.2:78399755-78399774 | None:intergenic | 40.0% | |
| ACTGCATTTCCTGCTTGATT+TGG | - | chr3.2:78399564-78399583 | None:intergenic | 40.0% | |
| AGACATGCTATGGGTTTAAG+GGG | - | chr3.2:78400475-78400494 | None:intergenic | 40.0% | |
| AGAGATGTGAAAATTCCTCC+AGG | + | chr3.2:78400774-78400793 | MS.gene06570:CDS | 40.0% | |
| AGTAATACCAGCATTCACTC+CGG | - | chr3.2:78397405-78397424 | None:intergenic | 40.0% | |
| ATGATATTGTAGGCTCTTGC+TGG | + | chr3.2:78397341-78397360 | MS.gene06570:intron | 40.0% | |
| CAACACAACCACAACTATCA+AGG | + | chr3.2:78398440-78398459 | MS.gene06570:intron | 40.0% | |
| CAATAAGGCTTTCAAGGTCA+TGG | - | chr3.2:78400019-78400038 | None:intergenic | 40.0% | |
| CATAAATGCTGCACTAGGAA+TGG | + | chr3.2:78399715-78399734 | MS.gene06570:intron | 40.0% | |
| CATACATGCACCTACCTAAT+AGG | - | chr3.2:78399907-78399926 | None:intergenic | 40.0% | |
| CATGCACAACTTGTGCTATA+AGG | + | chr3.2:78399047-78399066 | MS.gene06570:intron | 40.0% | |
| CTATTCTTTGCACTCGTTCA+AGG | + | chr3.2:78399594-78399613 | MS.gene06570:CDS | 40.0% | |
| GATAGTTGTGGTTGTGTTGA+TGG | - | chr3.2:78398439-78398458 | None:intergenic | 40.0% | |
| GGGTAAAAGGAAGGAGAAAA+GGG | + | chr3.2:78398005-78398024 | MS.gene06570:intron | 40.0% | |
| GGTTAACAACTGTTAAGAGG+AGG | + | chr3.2:78398718-78398737 | MS.gene06570:intron | 40.0% | |
| GTGGTCAAGAATCAAAAGTC+TGG | - | chr3.2:78400802-78400821 | None:intergenic | 40.0% | |
| GTTTACCACTGATGAAATGG+GGG | - | chr3.2:78399696-78399715 | None:intergenic | 40.0% | |
| GTTTGTGAGTTTAGAGAGGA+AGG | - | chr3.2:78398279-78398298 | None:intergenic | 40.0% | |
| TAGGCAAGAACATCTCACTT+GGG | - | chr3.2:78400412-78400431 | None:intergenic | 40.0% | |
| TGATTCTTGACCACATCCAT+AGG | + | chr3.2:78400808-78400827 | MS.gene06570:CDS | 40.0% | |
| TGGGTAAAAGGAAGGAGAAA+AGG | + | chr3.2:78398004-78398023 | MS.gene06570:intron | 40.0% | |
| TTTACATAGCCCAGTTGACT+TGG | - | chr3.2:78399821-78399840 | None:intergenic | 40.0% | |
| TTTCACCACTTATAGTTCGG+AGG | - | chr3.2:78400970-78400989 | None:intergenic | 40.0% | |
| ! | AAAGTCTTGTAGGGCCTATT+AGG | + | chr3.2:78399890-78399909 | MS.gene06570:intron | 40.0% |
| ! | AGAGTATCATTCCCTACCTA+TGG | - | chr3.2:78400827-78400846 | None:intergenic | 40.0% |
| ! | TCACACAACCTTGATAGTTG+TGG | - | chr3.2:78398451-78398470 | None:intergenic | 40.0% |
| ! | TCTCGTAATTCTGAAGACCA+AGG | - | chr3.2:78400592-78400611 | None:intergenic | 40.0% |
| ! | TTGAGGGGATGTTTTGTATG+AGG | - | chr3.2:78398079-78398098 | None:intergenic | 40.0% |
| ! | TTGAGTACCTCCATTTTGAG+GGG | - | chr3.2:78398094-78398113 | None:intergenic | 40.0% |
| ! | TTTGCGAGTTTCAAGTGGAT+TGG | + | chr3.2:78397969-78397988 | MS.gene06570:intron | 40.0% |
| !! | ATACCATCTTTTGAGAAGGG+TGG | - | chr3.2:78398862-78398881 | None:intergenic | 40.0% |
| !! | GAAAGCCTTATTGCAAGATG+AGG | + | chr3.2:78400026-78400045 | MS.gene06570:intron | 40.0% |
| !! | GTTTTCGTTGGTAAGTGGTA+TGG | + | chr3.2:78399533-78399552 | MS.gene06570:CDS | 40.0% |
| !! | TGAGGGTTAAGAGAAGCATT+AGG | - | chr3.2:78397206-78397225 | None:intergenic | 40.0% |
| !!! | CGGAATTTTGCTGTTATGAC+CGG | + | chr3.2:78397383-78397402 | MS.gene06570:CDS | 40.0% |
| AAAAGCGGAAGATGCATCAC+CGG | - | chr3.2:78397171-78397190 | None:intergenic | 45.0% | |
| ACAAGGAAAGCAAGGAGCAA+TGG | + | chr3.2:78396962-78396981 | MS.gene06570:CDS | 45.0% | |
| ACCACTTATAGTTCGGAGGT+AGG | - | chr3.2:78400966-78400985 | None:intergenic | 45.0% | |
| AGAATCAAAAGTCTGGGTCC+TGG | - | chr3.2:78400795-78400814 | None:intergenic | 45.0% | |
| AGTGTTTCTTGTGTCGTGTC+GGG | - | chr3.2:78397637-78397656 | None:intergenic | 45.0% | |
| ATATTGTAGGCTCTTGCTGG+AGG | + | chr3.2:78397344-78397363 | MS.gene06570:intron | 45.0% | |
| ATTGCCCTGAAACGCAAATG+GGG | + | chr3.2:78401106-78401125 | MS.gene06570:intron | 45.0% | |
| CAAAGCCTATAAGGGTAGAC+AGG | + | chr3.2:78398904-78398923 | MS.gene06570:intron | 45.0% | |
| CAAGATTTGAGAGAGAAGCG+TGG | + | chr3.2:78400911-78400930 | MS.gene06570:CDS | 45.0% | |
| CACAGTTAATCACACGGTGA+AGG | + | chr3.2:78401470-78401489 | MS.gene06570:intron | 45.0% | |
| CACGCTTCTCTCTCAAATCT+TGG | - | chr3.2:78400913-78400932 | None:intergenic | 45.0% | |
| CACTACTCACTATGACTCCA+AGG | - | chr3.2:78399756-78399775 | None:intergenic | 45.0% | |
| CACTAGGAATGGAAAACGGT+CGG | + | chr3.2:78399726-78399745 | MS.gene06570:intron | 45.0% | |
| CAGTGTTTCTTGTGTCGTGT+CGG | - | chr3.2:78397638-78397657 | None:intergenic | 45.0% | |
| CTAGGCAAGAACATCTCACT+TGG | - | chr3.2:78400413-78400432 | None:intergenic | 45.0% | |
| CTCTGTTTGCGAGTTTCAAG+TGG | + | chr3.2:78397964-78397983 | MS.gene06570:intron | 45.0% | |
| CTGTCTACCCTTATAGGCTT+TGG | - | chr3.2:78398906-78398925 | None:intergenic | 45.0% | |
| CTTCACCGTGTGATTAACTG+TGG | - | chr3.2:78401472-78401491 | None:intergenic | 45.0% | |
| CTTGACCACATCCATAGGTA+GGG | + | chr3.2:78400813-78400832 | MS.gene06570:intron | 45.0% | |
| CTTTGCCTCTACTCAATGAC+AGG | + | chr3.2:78400645-78400664 | MS.gene06570:CDS | 45.0% | |
| GACAGGACAGATTGCCTAAA+AGG | + | chr3.2:78398921-78398940 | MS.gene06570:intron | 45.0% | |
| GACATGCTATGGGTTTAAGG+GGG | - | chr3.2:78400474-78400493 | None:intergenic | 45.0% | |
| GAGTTTAGAGAGGAAGGGAA+GGG | - | chr3.2:78398273-78398292 | None:intergenic | 45.0% | |
| GATTGCCCTGAAACGCAAAT+GGG | + | chr3.2:78401105-78401124 | MS.gene06570:intron | 45.0% | |
| GCATAGTGAGTATCTTCAGC+AGG | - | chr3.2:78400545-78400564 | None:intergenic | 45.0% | |
| GCTGCACTAGGAATGGAAAA+CGG | + | chr3.2:78399722-78399741 | MS.gene06570:intron | 45.0% | |
| TAGTACCCCCATTTCATCAG+TGG | + | chr3.2:78399688-78399707 | MS.gene06570:intron | 45.0% | |
| TAGTGAGTATCTTCAGCAGG+TGG | - | chr3.2:78400542-78400561 | None:intergenic | 45.0% | |
| TATTGGAGGAGGATTTCGGA+GGG | + | chr3.2:78398120-78398139 | MS.gene06570:intron | 45.0% | |
| TCATTCCCTACCTATGGATG+TGG | - | chr3.2:78400821-78400840 | None:intergenic | 45.0% | |
| TCCAGTGTCCAACACAAACA+CGG | - | chr3.2:78397725-78397744 | None:intergenic | 45.0% | |
| TCCTACCTCCGAACTATAAG+TGG | + | chr3.2:78400962-78400981 | MS.gene06570:intron | 45.0% | |
| TCCTACCTGTCATTGAGTAG+AGG | - | chr3.2:78400653-78400672 | None:intergenic | 45.0% | |
| TCTGTCCTGTCTACCCTTAT+AGG | - | chr3.2:78398912-78398931 | None:intergenic | 45.0% | |
| TCTTGACCACATCCATAGGT+AGG | + | chr3.2:78400812-78400831 | MS.gene06570:intron | 45.0% | |
| TCTTGTAGGGCCTATTAGGT+AGG | + | chr3.2:78399894-78399913 | MS.gene06570:intron | 45.0% | |
| TCTTTGCACTCGTTCAAGGT+GGG | + | chr3.2:78399598-78399617 | MS.gene06570:CDS | 45.0% | |
| TGAGTTTAGAGAGGAAGGGA+AGG | - | chr3.2:78398274-78398293 | None:intergenic | 45.0% | |
| TGATTGCCCTGAAACGCAAA+TGG | + | chr3.2:78401104-78401123 | MS.gene06570:intron | 45.0% | |
| TTCTCTTAACCCTCAAGCCA+TGG | + | chr3.2:78397211-78397230 | MS.gene06570:CDS | 45.0% | |
| TTCTTTGCACTCGTTCAAGG+TGG | + | chr3.2:78399597-78399616 | MS.gene06570:CDS | 45.0% | |
| TTGACCCCATTTGCGTTTCA+GGG | - | chr3.2:78401113-78401132 | None:intergenic | 45.0% | |
| TTTACCGTGATGAGAGGAGA+TGG | - | chr3.2:78401541-78401560 | None:intergenic | 45.0% | |
| TTTGACCCCATTTGCGTTTC+AGG | - | chr3.2:78401114-78401133 | None:intergenic | 45.0% | |
| ! | CAAGGAGCAATGGTGTTGAA+AGG | + | chr3.2:78396972-78396991 | MS.gene06570:CDS | 45.0% |
| ! | TGCTTGTTGAAGAGAAGCCA+TGG | - | chr3.2:78397231-78397250 | None:intergenic | 45.0% |
| !! | ACCCATGAAAGCACCAATAG+CGG | - | chr3.2:78397141-78397160 | None:intergenic | 45.0% |
| !! | ATGATGATGGGAGGAAGAGA+GGG | + | chr3.2:78401702-78401721 | MS.gene06570:CDS | 45.0% |
| !! | CGAGTTTCAAGTGGATTGGA+GGG | + | chr3.2:78397973-78397992 | MS.gene06570:intron | 45.0% |
| !! | GAGAGCTTTGGGTAAAAGGA+AGG | + | chr3.2:78397996-78398015 | MS.gene06570:intron | 45.0% |
| !! | GAGTTTCAAGTGGATTGGAG+GGG | + | chr3.2:78397974-78397993 | MS.gene06570:intron | 45.0% |
| !! | GCCATGTTTTCGTTGGTAAG+TGG | + | chr3.2:78399528-78399547 | MS.gene06570:CDS | 45.0% |
| !! | GGGTTAAGAGAAGCATTAGG+CGG | - | chr3.2:78397203-78397222 | None:intergenic | 45.0% |
| !! | GTGGTTGTGTTGATGGTAGA+AGG | - | chr3.2:78398432-78398451 | None:intergenic | 45.0% |
| !! | TGCTCTTGTGGTGATGCTTT+TGG | + | chr3.2:78399343-78399362 | MS.gene06570:intron | 45.0% |
| !! | TGTTGGTTCCGTGTTTGTGT+TGG | + | chr3.2:78397714-78397733 | MS.gene06570:intron | 45.0% |
| !! | TTAAGAGAAGCATTAGGCGG+TGG | - | chr3.2:78397200-78397219 | None:intergenic | 45.0% |
| !!! | GCCCTACAAGACTTTTTCGA+TGG | - | chr3.2:78399885-78399904 | None:intergenic | 45.0% |
| !! | AATCATATTTATATATTAAA+AGG | + | chr3.2:78398690-78398709 | MS.gene06570:intron | 5.0% |
| !! | TTAATATATAAATATGATTA+TGG | - | chr3.2:78398689-78398708 | None:intergenic | 5.0% |
| !!! | TATTTGTATTTTTTTTTAAA+AGG | + | chr3.2:78397893-78397912 | MS.gene06570:intron | 5.0% |
| ACTCACTATGACTCCAAGGG+TGG | - | chr3.2:78399752-78399771 | None:intergenic | 50.0% | |
| AGCTCTCTGATGCCGGTATT+TGG | + | chr3.2:78399280-78399299 | MS.gene06570:intron | 50.0% | |
| AGGCAGAGCCAAAGCCTATA+AGG | + | chr3.2:78398895-78398914 | MS.gene06570:intron | 50.0% | |
| ATCAAAAGTCTGGGTCCTGG+AGG | - | chr3.2:78400792-78400811 | None:intergenic | 50.0% | |
| ATGGGTGGACCAAATCAAGC+AGG | + | chr3.2:78399552-78399571 | MS.gene06570:CDS | 50.0% | |
| CTCTCCATCTCCTCTCATCA+CGG | + | chr3.2:78401534-78401553 | MS.gene06570:intron | 50.0% | |
| CTGCCACCCTTCTCAAAAGA+TGG | + | chr3.2:78398856-78398875 | MS.gene06570:intron | 50.0% | |
| CTTGAAGAGCTCTCTGATGC+CGG | + | chr3.2:78399273-78399292 | MS.gene06570:intron | 50.0% | |
| GAAGAGAAGCCATGGCTTGA+GGG | - | chr3.2:78397223-78397242 | None:intergenic | 50.0% | |
| GAGGTCCTTTGATTCAGGCT+CGG | + | chr3.2:78397363-78397382 | MS.gene06570:CDS | 50.0% | |
| GCAGGAAATGCAGTCACATC+TGG | + | chr3.2:78399570-78399589 | MS.gene06570:CDS | 50.0% | |
| GCCTCTACTCAATGACAGGT+AGG | + | chr3.2:78400649-78400668 | MS.gene06570:intron | 50.0% | |
| GCTTTCATGGGTACTCTCAC+CGG | + | chr3.2:78397149-78397168 | MS.gene06570:CDS | 50.0% | |
| GGCAGAGCCAAAGCCTATAA+GGG | + | chr3.2:78398896-78398915 | MS.gene06570:intron | 50.0% | |
| GGCTTCTCTTCAACAAGCAC+AGG | + | chr3.2:78397232-78397251 | MS.gene06570:CDS | 50.0% | |
| GGGATTCAGTCAGGGAAATG+AGG | + | chr3.2:78398582-78398601 | MS.gene06570:intron | 50.0% | |
| GTATTGGAGGAGGATTTCGG+AGG | + | chr3.2:78398119-78398138 | MS.gene06570:intron | 50.0% | |
| GTTATGACCGGAGTGAATGC+TGG | + | chr3.2:78397395-78397414 | MS.gene06570:CDS | 50.0% | |
| TCCGTGTTTGTGTTGGACAC+TGG | + | chr3.2:78397721-78397740 | MS.gene06570:intron | 50.0% | |
| TGAAGAGAAGCCATGGCTTG+AGG | - | chr3.2:78397224-78397243 | None:intergenic | 50.0% | |
| TGCTGGAGGTCCTTTGATTC+AGG | + | chr3.2:78397358-78397377 | MS.gene06570:CDS | 50.0% | |
| TGGAGGTTTACCGTGATGAG+AGG | - | chr3.2:78401547-78401566 | None:intergenic | 50.0% | |
| TTAGAGAGGAAGGGAAGGGA+GGG | - | chr3.2:78398269-78398288 | None:intergenic | 50.0% | |
| TTTAGAGAGGAAGGGAAGGG+AGG | - | chr3.2:78398270-78398289 | None:intergenic | 50.0% | |
| ! | ATCAGAACAGATGACGGCGA+TGG | - | chr3.2:78401603-78401622 | None:intergenic | 50.0% |
| ! | GCATTTTGTTCGTGCTCACC+TGG | - | chr3.2:78399629-78399648 | None:intergenic | 50.0% |
| ! | GCCGCTATTGGTGCTTTCAT+GGG | + | chr3.2:78397137-78397156 | MS.gene06570:CDS | 50.0% |
| ! | TCAGAACAGATGACGGCGAT+GGG | - | chr3.2:78401602-78401621 | None:intergenic | 50.0% |
| ! | TCGTTGGTAAGTGGTATGGG+TGG | + | chr3.2:78399537-78399556 | MS.gene06570:CDS | 50.0% |
| ! | TGCCGCTATTGGTGCTTTCA+TGG | + | chr3.2:78397136-78397155 | MS.gene06570:CDS | 50.0% |
| !! | AGGGGAGAGCTTTGGGTAAA+AGG | + | chr3.2:78397992-78398011 | MS.gene06570:intron | 50.0% |
| !! | CATCTTTTGAGAAGGGTGGC+AGG | - | chr3.2:78398858-78398877 | None:intergenic | 50.0% |
| !! | GATGATGATGGGAGGAAGAG+AGG | + | chr3.2:78401701-78401720 | MS.gene06570:CDS | 50.0% |
| !! | GCGAGTTTCAAGTGGATTGG+AGG | + | chr3.2:78397972-78397991 | MS.gene06570:intron | 50.0% |
| !!! | TTCTGGGGCCATGTTTTCGT+TGG | + | chr3.2:78399521-78399540 | MS.gene06570:CDS | 50.0% |
| AAGAAGGGAGAGGAGGAGTG+GGG | + | chr3.2:78401766-78401785 | MS.gene06570:CDS | 55.0% | |
| ACCAATAGCGGCACCTTGAG+CGG | - | chr3.2:78397129-78397148 | None:intergenic | 55.0% | |
| AGAAGAAGGGAGAGGAGGAG+TGG | + | chr3.2:78401764-78401783 | MS.gene06570:CDS | 55.0% | |
| AGAGGAGGAGTGGGGATTGT+GGG | + | chr3.2:78401774-78401793 | MS.gene06570:CDS | 55.0% | |
| AGGAAGAGAGGGCGATGATG+GGG | + | chr3.2:78401713-78401732 | MS.gene06570:CDS | 55.0% | |
| AGGCGGTGGAGTTGGAAAAG+CGG | - | chr3.2:78397186-78397205 | None:intergenic | 55.0% | |
| GAAGAAGGGAGAGGAGGAGT+GGG | + | chr3.2:78401765-78401784 | MS.gene06570:CDS | 55.0% | |
| GACGAAGAAGAAGGGAGAGG+AGG | + | chr3.2:78401759-78401778 | MS.gene06570:CDS | 55.0% | |
| GAGGAAGAGAGGGCGATGAT+GGG | + | chr3.2:78401712-78401731 | MS.gene06570:CDS | 55.0% | |
| GGATTGGAGGGGAGAGCTTT+GGG | + | chr3.2:78397985-78398004 | MS.gene06570:intron | 55.0% | |
| GGCAGCTGCGAGATGATGAT+GGG | + | chr3.2:78401690-78401709 | MS.gene06570:CDS | 55.0% | |
| ! | CTTTGGGGGAGAAGAGTAGG+GGG | - | chr3.2:78398246-78398265 | None:intergenic | 55.0% |
| ! | GAAGCATTAGGCGGTGGAGT+TGG | - | chr3.2:78397194-78397213 | None:intergenic | 55.0% |
| ! | TGGATTGGAGGGGAGAGCTT+TGG | + | chr3.2:78397984-78398003 | MS.gene06570:intron | 55.0% |
| !! | AGCTGCGAGATGATGATGGG+AGG | + | chr3.2:78401693-78401712 | MS.gene06570:CDS | 55.0% |
| !! | CGTTCAAGGTGGGCTTTTCC+AGG | + | chr3.2:78399608-78399627 | MS.gene06570:CDS | 55.0% |
| !! | GATGATGGGGAGAGGCGAAA+CGG | + | chr3.2:78401726-78401745 | MS.gene06570:CDS | 55.0% |
| !! | GCTTTGGGGGAGAAGAGTAG+GGG | - | chr3.2:78398247-78398266 | None:intergenic | 55.0% |
| !! | GGCTTTGGGGGAGAAGAGTA+GGG | - | chr3.2:78398248-78398267 | None:intergenic | 55.0% |
| !!! | ATGGCGGCAGCTTTTGGTTC+TGG | + | chr3.2:78399504-78399523 | MS.gene06570:CDS | 55.0% |
| !!! | TGGCGGCAGCTTTTGGTTCT+GGG | + | chr3.2:78399505-78399524 | MS.gene06570:CDS | 55.0% |
| AGGAAGGGAAGGGAGGGCTT+TGG | - | chr3.2:78398263-78398282 | None:intergenic | 60.0% | |
| AGTGACGACGGCGGCTTCAA+CGG | - | chr3.2:78397096-78397115 | None:intergenic | 60.0% | |
| ATGACGGCGATGGGTGGTTG+TGG | - | chr3.2:78401593-78401612 | None:intergenic | 60.0% | |
| CGGCAGCTGCGAGATGATGA+TGG | + | chr3.2:78401689-78401708 | MS.gene06570:CDS | 60.0% | |
| GAAGGGAAGGGAGGGCTTTG+GGG | - | chr3.2:78398261-78398280 | None:intergenic | 60.0% | |
| GAGAGGAGGAGTGGGGATTG+TGG | + | chr3.2:78401773-78401792 | MS.gene06570:CDS | 60.0% | |
| GGAAGGGAAGGGAGGGCTTT+GGG | - | chr3.2:78398262-78398281 | None:intergenic | 60.0% | |
| GGAGGAAGAGAGGGCGATGA+TGG | + | chr3.2:78401711-78401730 | MS.gene06570:CDS | 60.0% | |
| GGCGACGAAGAAGAAGGGAG+AGG | + | chr3.2:78401756-78401775 | MS.gene06570:CDS | 60.0% | |
| TGACGGCGATGGGTGGTTGT+GGG | - | chr3.2:78401592-78401611 | None:intergenic | 60.0% | |
| ! | AAGGGAAGGGAGGGCTTTGG+GGG | - | chr3.2:78398260-78398279 | None:intergenic | 60.0% |
| ! | GAACAGATGACGGCGATGGG+TGG | - | chr3.2:78401599-78401618 | None:intergenic | 60.0% |
| ! | TGCAGCATGGCGGCAGCTTT+TGG | + | chr3.2:78399498-78399517 | MS.gene06570:intron | 60.0% |
| !! | GGGCTTTGGGGGAGAAGAGT+AGG | - | chr3.2:78398249-78398268 | None:intergenic | 60.0% |
| !!! | GGCGGCAGCTTTTGGTTCTG+GGG | + | chr3.2:78399506-78399525 | MS.gene06570:CDS | 60.0% |
| ACTACCACCAGCGCCGCTCA+AGG | + | chr3.2:78397113-78397132 | MS.gene06570:CDS | 65.0% | |
| GACGGCGGCTTCAACGGCAA+TGG | - | chr3.2:78397090-78397109 | None:intergenic | 65.0% | |
| GATGGGGAGAGGCGAAACGG+TGG | + | chr3.2:78401729-78401748 | MS.gene06570:CDS | 65.0% | |
| GCGGCGGCGACGAAGAAGAA+GGG | + | chr3.2:78401751-78401770 | MS.gene06570:CDS | 65.0% | |
| GGAAAACGGTCGGCCACCCT+TGG | + | chr3.2:78399736-78399755 | MS.gene06570:intron | 65.0% | |
| ! | GCTGGTGGTAGTGACGACGG+CGG | - | chr3.2:78397105-78397124 | None:intergenic | 65.0% |
| !! | GAGAGGGCGATGATGGGGAG+AGG | + | chr3.2:78401718-78401737 | MS.gene06570:CDS | 65.0% |
| !! | GCCGCTCAAGGTGCCGCTAT+TGG | + | chr3.2:78397125-78397144 | MS.gene06570:CDS | 65.0% |
| !! | GGCGCTGGTGGTAGTGACGA+CGG | - | chr3.2:78397108-78397127 | None:intergenic | 65.0% |
| CGATGGGTGGTTGTGGGCGG+TGG | - | chr3.2:78401586-78401605 | None:intergenic | 70.0% | |
| CGGCGATGGGTGGTTGTGGG+CGG | - | chr3.2:78401589-78401608 | None:intergenic | 70.0% | |
| GGCGGCGGCGACGAAGAAGA+AGG | + | chr3.2:78401750-78401769 | MS.gene06570:CDS | 70.0% | |
| GGGGAGAGGCGAAACGGTGG+CGG | + | chr3.2:78401732-78401751 | MS.gene06570:CDS | 70.0% | |
| GTGGTTGTGGGCGGTGGTGC+TGG | - | chr3.2:78401580-78401599 | None:intergenic | 70.0% | |
| ! | GAGAGGCGAAACGGTGGCGG+CGG | + | chr3.2:78401735-78401754 | MS.gene06570:CDS | 70.0% |
| ! | GTTGTGGGCGGTGGTGCTGG+TGG | - | chr3.2:78401577-78401596 | None:intergenic | 70.0% |
| !! | GCGGTGGTGCTGGTGGTGGT+GGG | - | chr3.2:78401570-78401589 | None:intergenic | 70.0% |
| !! | GTGCTGGTGGTGGTGGGTGG+AGG | - | chr3.2:78401564-78401583 | None:intergenic | 70.0% |
| !! | GTGGTGCTGGTGGTGGTGGG+TGG | - | chr3.2:78401567-78401586 | None:intergenic | 70.0% |
| AGCGGCACCTTGAGCGGCGC+TGG | - | chr3.2:78397123-78397142 | None:intergenic | 75.0% | |
| ! | GGCACCTTGAGCGGCGCTGG+TGG | - | chr3.2:78397120-78397139 | None:intergenic | 75.0% |
| !! | GGCGGTGGTGCTGGTGGTGG+TGG | - | chr3.2:78401571-78401590 | None:intergenic | 75.0% |
| !! | GTGGGCGGTGGTGCTGGTGG+TGG | - | chr3.2:78401574-78401593 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 78396957 | 78401803 | 78396957 | ID=MS.gene06570 |
| chr3.2 | mRNA | 78396957 | 78401803 | 78396957 | ID=MS.gene06570.t1;Parent=MS.gene06570 |
| chr3.2 | exon | 78396957 | 78397253 | 78396957 | ID=MS.gene06570.t1.exon1;Parent=MS.gene06570.t1 |
| chr3.2 | CDS | 78396957 | 78397253 | 78396957 | ID=cds.MS.gene06570.t1;Parent=MS.gene06570.t1 |
| chr3.2 | exon | 78397353 | 78397468 | 78397353 | ID=MS.gene06570.t1.exon2;Parent=MS.gene06570.t1 |
| chr3.2 | CDS | 78397353 | 78397468 | 78397353 | ID=cds.MS.gene06570.t1;Parent=MS.gene06570.t1 |
| chr3.2 | exon | 78399503 | 78399629 | 78399503 | ID=MS.gene06570.t1.exon3;Parent=MS.gene06570.t1 |
| chr3.2 | CDS | 78399503 | 78399629 | 78399503 | ID=cds.MS.gene06570.t1;Parent=MS.gene06570.t1 |
| chr3.2 | exon | 78400518 | 78400666 | 78400518 | ID=MS.gene06570.t1.exon4;Parent=MS.gene06570.t1 |
| chr3.2 | CDS | 78400518 | 78400666 | 78400518 | ID=cds.MS.gene06570.t1;Parent=MS.gene06570.t1 |
| chr3.2 | exon | 78400767 | 78400829 | 78400767 | ID=MS.gene06570.t1.exon5;Parent=MS.gene06570.t1 |
| chr3.2 | CDS | 78400767 | 78400829 | 78400767 | ID=cds.MS.gene06570.t1;Parent=MS.gene06570.t1 |
| chr3.2 | exon | 78400907 | 78400941 | 78400907 | ID=MS.gene06570.t1.exon6;Parent=MS.gene06570.t1 |
| chr3.2 | CDS | 78400907 | 78400941 | 78400907 | ID=cds.MS.gene06570.t1;Parent=MS.gene06570.t1 |
| chr3.2 | exon | 78401667 | 78401803 | 78401667 | ID=MS.gene06570.t1.exon7;Parent=MS.gene06570.t1 |
| chr3.2 | CDS | 78401667 | 78401803 | 78401667 | ID=cds.MS.gene06570.t1;Parent=MS.gene06570.t1 |
| Gene Sequence |
| Protein sequence |
