Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049440.t1 | XP_004502789.1 | 92.6 | 229 | 17 | 0 | 1 | 229 | 1 | 229 | 8.10E-111 | 409.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049440.t1 | Q9FLT9 | 55.6 | 225 | 91 | 2 | 5 | 229 | 10 | 225 | 1.9e-60 | 233.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049440.t1 | A0A1S2YDW5 | 92.6 | 229 | 17 | 0 | 1 | 229 | 1 | 229 | 5.9e-111 | 409.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049440 | MS.gene06570 | 0.884869 | 1.33E-71 | -1.69E-46 |
| MS.gene049440 | MS.gene41132 | 0.800727 | 1.26E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049440.t1 | MTR_3g093380 | 93.013 | 229 | 16 | 0 | 1 | 229 | 1 | 229 | 1.07e-149 | 417 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049440.t1 | AT5G24650 | 55.556 | 225 | 91 | 2 | 5 | 229 | 10 | 225 | 7.31e-83 | 248 |
| MS.gene049440.t1 | AT3G49560 | 53.589 | 209 | 88 | 2 | 9 | 217 | 19 | 218 | 1.05e-70 | 217 |
Find 59 sgRNAs with CRISPR-Local
Find 285 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCTGGAGGTCCTTTGATTC+AGG | 0.192480 | 3.3:+77789137 | MS.gene049440:CDS |
| CGTTACAAACACTTAGAAAA+TGG | 0.200233 | 3.3:+77788817 | MS.gene049440:CDS |
| TGCAGCATGGCGGCAGCTTT+TGG | 0.235154 | 3.3:+77791272 | MS.gene049440:intron |
| TAGAAAATGGTTTCAAGCTT+TGG | 0.285327 | 3.3:+77788830 | MS.gene049440:CDS |
| CGAGTTTGAATTTGGTCAAT+TGG | 0.290268 | 3.3:-77788796 | None:intergenic |
| ATGATATTGTAGGCTCTTGC+TGG | 0.319007 | 3.3:+77789120 | MS.gene049440:intron |
| ACTGCATTTCCTGCTTGATT+TGG | 0.323697 | 3.3:-77791335 | None:intergenic |
| GTTTGTAACGAGTTTGAATT+TGG | 0.348045 | 3.3:-77788804 | None:intergenic |
| TGCCGCTATTGGTGCTTTCA+TGG | 0.355015 | 3.3:+77788915 | MS.gene049440:CDS |
| GCCGCTCAAGGTGCCGCTAT+TGG | 0.367727 | 3.3:+77788904 | MS.gene049440:CDS |
| GCAGGAAATGCAGTCACATC+TGG | 0.396069 | 3.3:+77791344 | MS.gene049440:CDS |
| TTATTCTTTGCACTCGTTCA+AGG | 0.414145 | 3.3:+77791368 | MS.gene049440:CDS |
| AGCGGCACCTTGAGCGGCGC+TGG | 0.419336 | 3.3:-77788899 | None:intergenic |
| GAGTTTGAATTTGGTCAATT+GGG | 0.427360 | 3.3:-77788795 | None:intergenic |
| GGCTTCTCTTCAACAAGCAC+AGG | 0.449575 | 3.3:+77789011 | MS.gene049440:CDS |
| GAAGAGAAGCCATGGCTTGA+GGG | 0.462480 | 3.3:-77788999 | None:intergenic |
| GCCGCTATTGGTGCTTTCAT+GGG | 0.474538 | 3.3:+77788916 | MS.gene049440:CDS |
| GAAAGGAAGATGTTCAATCT+AGG | 0.476299 | 3.3:+77789226 | MS.gene049440:CDS |
| ACCAATAGCGGCACCTTGAG+CGG | 0.478375 | 3.3:-77788905 | None:intergenic |
| TGAGGGTTAAGAGAAGCATT+AGG | 0.484112 | 3.3:-77788982 | None:intergenic |
| GCTTTCATGGGTACTCTCAC+CGG | 0.501511 | 3.3:+77788928 | MS.gene049440:CDS |
| GAAGCATTAGGCGGTGGAGT+TGG | 0.513779 | 3.3:-77788970 | None:intergenic |
| GCATAGTGAGTATCTTCAGC+AGG | 0.520197 | 3.3:-77792316 | None:intergenic |
| GAGGTCCTTTGATTCAGGCT+CGG | 0.526552 | 3.3:+77789142 | MS.gene049440:CDS |
| TTCTCTTAACCCTCAAGCCA+TGG | 0.531805 | 3.3:+77788990 | MS.gene049440:CDS |
| AGTGACGACGGCGGCTTCAA+CGG | 0.534169 | 3.3:-77788872 | None:intergenic |
| TTTGAAAAGGTTGAGAGGAA+AGG | 0.538369 | 3.3:+77789209 | MS.gene049440:CDS |
| GACGGCGGCTTCAACGGCAA+TGG | 0.539945 | 3.3:-77788866 | None:intergenic |
| AAATTCCGAGCCTGAATCAA+AGG | 0.541754 | 3.3:-77789147 | None:intergenic |
| TGAAGAGAAGCCATGGCTTG+AGG | 0.543694 | 3.3:-77789000 | None:intergenic |
| GGCACCTTGAGCGGCGCTGG+TGG | 0.544497 | 3.3:-77788896 | None:intergenic |
| AGAAACATGTTGCAAAACCT+TGG | 0.547455 | 3.3:+77792346 | MS.gene049440:CDS |
| AAAATGGAACAAGGAAAGCA+AGG | 0.552828 | 3.3:+77788733 | None:intergenic |
| ACCACTTACCAACGAAAACA+TGG | 0.554052 | 3.3:-77791303 | None:intergenic |
| TTAAGAGAAGCATTAGGCGG+TGG | 0.554987 | 3.3:-77788976 | None:intergenic |
| CTTTGCCTCTACTCAATGAC+AGG | 0.556049 | 3.3:+77792419 | MS.gene049440:CDS |
| CAAGGAGCAATGGTGTTGAA+AGG | 0.560406 | 3.3:+77788751 | MS.gene049440:CDS |
| TCTTTGCACTCGTTCAAGGT+GGG | 0.562699 | 3.3:+77791372 | MS.gene049440:CDS |
| TTCTTTGCACTCGTTCAAGG+TGG | 0.566306 | 3.3:+77791371 | MS.gene049440:CDS |
| TGCTTGTTGAAGAGAAGCCA+TGG | 0.570983 | 3.3:-77789007 | None:intergenic |
| GTTATGACCGGAGTGAATGC+TGG | 0.579346 | 3.3:+77789174 | MS.gene049440:CDS |
| ACAAGGAAAGCAAGGAGCAA+TGG | 0.598205 | 3.3:+77788741 | MS.gene049440:CDS |
| ACTACCACCAGCGCCGCTCA+AGG | 0.598244 | 3.3:+77788892 | MS.gene049440:CDS |
| ATGGGTGGACCAAATCAAGC+AGG | 0.603273 | 3.3:+77791326 | MS.gene049440:CDS |
| AAAAGCGGAAGATGCATCAC+CGG | 0.604200 | 3.3:-77788947 | None:intergenic |
| ATATTGTAGGCTCTTGCTGG+AGG | 0.609110 | 3.3:+77789123 | MS.gene049440:intron |
| TCGTTGGTAAGTGGTATGGG+TGG | 0.609634 | 3.3:+77791311 | MS.gene049440:CDS |
| TCTCGTAATTCTGAAGACCA+AGG | 0.621324 | 3.3:-77792363 | None:intergenic |
| TCCTACCTGTCATTGAGTAG+AGG | 0.629468 | 3.3:-77792424 | None:intergenic |
| AGGCGGTGGAGTTGGAAAAG+CGG | 0.634509 | 3.3:-77788962 | None:intergenic |
| ACCCATGAAAGCACCAATAG+CGG | 0.640706 | 3.3:-77788917 | None:intergenic |
| GCCTCTACTCAATGACAGGT+AGG | 0.643400 | 3.3:+77792423 | MS.gene049440:CDS |
| GGCGCTGGTGGTAGTGACGA+CGG | 0.652693 | 3.3:-77788884 | None:intergenic |
| AGTAATACCAGCATTCACTC+CGG | 0.663197 | 3.3:-77789181 | None:intergenic |
| TAGTGAGTATCTTCAGCAGG+TGG | 0.670063 | 3.3:-77792313 | None:intergenic |
| AAATTCAAGAAAATGGAACA+AGG | 0.680356 | 3.3:+77788724 | None:intergenic |
| GGGTTAAGAGAAGCATTAGG+CGG | 0.704564 | 3.3:-77788979 | None:intergenic |
| AATTATTTATTGCAGCATGG+CGG | 0.719549 | 3.3:+77791262 | MS.gene049440:intron |
| GCTGGTGGTAGTGACGACGG+CGG | 0.763415 | 3.3:-77788881 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CAACAAAAATTAAAAAAATT+AGG | - | chr3.3:77789073-77789092 | None:intergenic | 10.0% |
| !! | TGATTATTAACAAATTATTT+GGG | + | chr3.3:77792095-77792114 | MS.gene049440:intron | 10.0% |
| !! | TTGATTATTAACAAATTATT+TGG | + | chr3.3:77792094-77792113 | MS.gene049440:intron | 10.0% |
| !!! | ATTTTAATTACAATCTTTTT+AGG | - | chr3.3:77790436-77790455 | None:intergenic | 10.0% |
| !!! | TTTATATATTAAAAGGTTTT+AGG | + | chr3.3:77790476-77790495 | MS.gene049440:intron | 10.0% |
| !! | AAAATGTTTACATCTTTAAA+TGG | - | chr3.3:77791738-77791757 | None:intergenic | 15.0% |
| !! | AAATGTTTACATCTTTAAAT+GGG | - | chr3.3:77791737-77791756 | None:intergenic | 15.0% |
| !! | AATAGTTTAGTGTTAATAAT+TGG | - | chr3.3:77789362-77789381 | None:intergenic | 15.0% |
| !! | ATAAATATTGCATAAATTGA+TGG | + | chr3.3:77790098-77790117 | MS.gene049440:intron | 15.0% |
| !! | ATATTATAACAACATAGATT+AGG | - | chr3.3:77789944-77789963 | None:intergenic | 15.0% |
| !! | ATTGTTAAAAAATTTAGACA+TGG | + | chr3.3:77792146-77792165 | MS.gene049440:intron | 15.0% |
| !! | ATTTATAAGTCAATATAAGA+TGG | + | chr3.3:77790937-77790956 | MS.gene049440:intron | 15.0% |
| !! | CAATTTATGCAATATTTATT+TGG | - | chr3.3:77790097-77790116 | None:intergenic | 15.0% |
| !! | GTAAAATAAATTCTATACAT+TGG | - | chr3.3:77791763-77791782 | None:intergenic | 15.0% |
| !!! | AAGTTTGAAATTTAATATTG+AGG | - | chr3.3:77790980-77790999 | None:intergenic | 15.0% |
| !!! | AGTTATTAATGTCAAATTTT+TGG | + | chr3.3:77791629-77791648 | MS.gene049440:intron | 15.0% |
| !!! | ATTTGTTTTAATTTGTTCTT+GGG | + | chr3.3:77789579-77789598 | MS.gene049440:intron | 15.0% |
| !!! | TATTTTCATAAACTCTAAAA+AGG | - | chr3.3:77790142-77790161 | None:intergenic | 15.0% |
| !!! | TGACAGTTATTTTAAAAAAT+CGG | - | chr3.3:77791887-77791906 | None:intergenic | 15.0% |
| !!! | TGTCTAAATTTTTTAACAAT+AGG | - | chr3.3:77792146-77792165 | None:intergenic | 15.0% |
| !! | AAAATTTAGACATGGTTTAT+TGG | + | chr3.3:77792154-77792173 | MS.gene049440:intron | 20.0% |
| !! | AAGAGAAAAGAAGAAAAATT+AGG | - | chr3.3:77789265-77789284 | None:intergenic | 20.0% |
| !! | CAAGAACAAATTAAAACAAA+TGG | - | chr3.3:77789580-77789599 | None:intergenic | 20.0% |
| !! | GACATTCCTTTATAAAAATT+TGG | - | chr3.3:77792015-77792034 | None:intergenic | 20.0% |
| !! | TGTTACTGTTAAAATTATAG+GGG | + | chr3.3:77790341-77790360 | MS.gene049440:intron | 20.0% |
| !! | TTGTTGAATTTCAAAAGTTA+GGG | + | chr3.3:77789087-77789106 | MS.gene049440:intron | 20.0% |
| !! | TTTGTTGAATTTCAAAAGTT+AGG | + | chr3.3:77789086-77789105 | MS.gene049440:intron | 20.0% |
| !!! | ATGGTATATTTTCATGTATT+AGG | + | chr3.3:77790654-77790673 | MS.gene049440:intron | 20.0% |
| !!! | CATTTGTTTTAATTTGTTCT+TGG | + | chr3.3:77789578-77789597 | MS.gene049440:intron | 20.0% |
| !!! | GTGTTACTGTTAAAATTATA+GGG | + | chr3.3:77790340-77790359 | MS.gene049440:intron | 20.0% |
| !!! | TGTATTTCCGATTTTTATTT+TGG | + | chr3.3:77792220-77792239 | MS.gene049440:intron | 20.0% |
| !!! | TGTGTTACTGTTAAAATTAT+AGG | + | chr3.3:77790339-77790358 | MS.gene049440:intron | 20.0% |
| !!! | TTTGTTGTTTATGATATTGT+AGG | + | chr3.3:77789110-77789129 | MS.gene049440:intron | 20.0% |
| ! | AACCCACTAATAATAGAATA+AGG | - | chr3.3:77790561-77790580 | None:intergenic | 25.0% |
| ! | AATATTGCATAAATTGATGG+AGG | + | chr3.3:77790101-77790120 | MS.gene049440:intron | 25.0% |
| ! | ATACATATAACAACGAATCT+AGG | - | chr3.3:77792205-77792224 | None:intergenic | 25.0% |
| ! | ATAGTCCCTAAACTTAAATA+GGG | + | chr3.3:77789821-77789840 | MS.gene049440:intron | 25.0% |
| ! | CTTAAATTCATGTCAAGTTA+AGG | + | chr3.3:77790791-77790810 | MS.gene049440:intron | 25.0% |
| ! | GTCAAATACTCAATTCATAT+TGG | + | chr3.3:77791903-77791922 | MS.gene049440:intron | 25.0% |
| ! | TACAATTATTTATTGCAGCA+TGG | + | chr3.3:77791259-77791278 | MS.gene049440:intron | 25.0% |
| ! | TATACATTAATCATGCAGAT+AGG | + | chr3.3:77792274-77792293 | MS.gene049440:intron | 25.0% |
| ! | TCCTTTATAAAAATTTGGCA+TGG | - | chr3.3:77792010-77792029 | None:intergenic | 25.0% |
| ! | TTATATTTACCAAGTCAACT+GGG | + | chr3.3:77791583-77791602 | MS.gene049440:intron | 25.0% |
| ! | TTCATCTACAATAAATCTGT+TGG | - | chr3.3:77791089-77791108 | None:intergenic | 25.0% |
| ! | TTTAATATAATCACACGTGT+TGG | + | chr3.3:77789476-77789495 | MS.gene049440:intron | 25.0% |
| !! | AATGTAAAACTAGTTTACAC+TGG | + | chr3.3:77791931-77791950 | MS.gene049440:intron | 25.0% |
| !! | AGACTTTTTAATAGCCTTTT+AGG | + | chr3.3:77791984-77792003 | MS.gene049440:intron | 25.0% |
| !! | ATCATCTCATTTGTGTTATT+TGG | + | chr3.3:77790762-77790781 | MS.gene049440:intron | 25.0% |
| !! | ATGATTTATTTGACCCTTTT+AGG | - | chr3.3:77790717-77790736 | None:intergenic | 25.0% |
| !! | ATTTTTATAAAGGAATGTCC+AGG | + | chr3.3:77792016-77792035 | MS.gene049440:intron | 25.0% |
| !! | CAAATAAATCATGATAGTGT+GGG | + | chr3.3:77790725-77790744 | MS.gene049440:intron | 25.0% |
| !! | GTACTACTACAAGATTATTT+TGG | - | chr3.3:77791448-77791467 | None:intergenic | 25.0% |
| !! | TATAGTTTAAGACATGCTAT+GGG | - | chr3.3:77792258-77792277 | None:intergenic | 25.0% |
| !! | TATTTATTTGGCTTACACTA+AGG | - | chr3.3:77790085-77790104 | None:intergenic | 25.0% |
| !! | TCAAATAAATCATGATAGTG+TGG | + | chr3.3:77790724-77790743 | MS.gene049440:intron | 25.0% |
| !! | TCATCACCATTTTATGTTAT+TGG | + | chr3.3:77790864-77790883 | MS.gene049440:intron | 25.0% |
| !! | TGCCTTATTCTATTATTAGT+GGG | + | chr3.3:77790556-77790575 | MS.gene049440:intron | 25.0% |
| !! | TGCTATAATTTTGTGAATTG+TGG | + | chr3.3:77789609-77789628 | MS.gene049440:intron | 25.0% |
| !! | TTGCCTTATTCTATTATTAG+TGG | + | chr3.3:77790555-77790574 | MS.gene049440:intron | 25.0% |
| !! | TTTCATCGAATTTTCTATGT+TGG | + | chr3.3:77789034-77789053 | MS.gene049440:intron | 25.0% |
| !! | TTTTCTCTTTCTTGTATGTT+TGG | + | chr3.3:77789276-77789295 | MS.gene049440:intron | 25.0% |
| !!! | AAATATACCATCTTTTGAGA+AGG | - | chr3.3:77790645-77790664 | None:intergenic | 25.0% |
| !!! | AATATACCATCTTTTGAGAA+GGG | - | chr3.3:77790644-77790663 | None:intergenic | 25.0% |
| !!! | ATTCTATTATTAGTGGGTTT+GGG | + | chr3.3:77790562-77790581 | MS.gene049440:intron | 25.0% |
| !!! | GCATTTTTCAATTTTCATGT+TGG | + | chr3.3:77792052-77792071 | MS.gene049440:intron | 25.0% |
| !!! | GTATTACTTGTGTTTTGAAA+AGG | + | chr3.3:77789196-77789215 | MS.gene049440:CDS | 25.0% |
| !!! | TACGAGAAGAATTTTAAGAA+AGG | + | chr3.3:77792379-77792398 | MS.gene049440:CDS | 25.0% |
| !!! | TATTCTATTATTAGTGGGTT+TGG | + | chr3.3:77790561-77790580 | MS.gene049440:intron | 25.0% |
| AAGACACATCAATGATAACA+AGG | - | chr3.3:77791215-77791234 | None:intergenic | 30.0% | |
| AATTATTTATTGCAGCATGG+CGG | + | chr3.3:77791262-77791281 | MS.gene049440:intron | 30.0% | |
| ACCAGACCAATAACATAAAA+TGG | - | chr3.3:77790873-77790892 | None:intergenic | 30.0% | |
| AGAAAAGGGAAATGAAAGAA+AGG | + | chr3.3:77789798-77789817 | MS.gene049440:intron | 30.0% | |
| AGCAATATGATAGTAAGTCA+TGG | - | chr3.3:77791841-77791860 | None:intergenic | 30.0% | |
| AGTCTATCTTGAAAGAGAAA+AGG | - | chr3.3:77791969-77791988 | None:intergenic | 30.0% | |
| ATGTTTACCACTGATGAAAT+GGG | - | chr3.3:77791472-77791491 | None:intergenic | 30.0% | |
| CGTTACAAACACTTAGAAAA+TGG | + | chr3.3:77788817-77788836 | MS.gene049440:CDS | 30.0% | |
| CTTATATTTACCAAGTCAAC+TGG | + | chr3.3:77791582-77791601 | MS.gene049440:intron | 30.0% | |
| GAGTTTGAATTTGGTCAATT+GGG | - | chr3.3:77788798-77788817 | None:intergenic | 30.0% | |
| GATAGTCCCTAAACTTAAAT+AGG | + | chr3.3:77789820-77789839 | MS.gene049440:intron | 30.0% | |
| GTACTCAAAAATTGTATTGG+AGG | + | chr3.3:77789885-77789904 | MS.gene049440:intron | 30.0% | |
| GTTTGTAACGAGTTTGAATT+TGG | - | chr3.3:77788807-77788826 | None:intergenic | 30.0% | |
| TAATCAACAAACATTCACTG+AGG | - | chr3.3:77792081-77792100 | None:intergenic | 30.0% | |
| TAGAAAATGGTTTCAAGCTT+TGG | + | chr3.3:77788830-77788849 | MS.gene049440:CDS | 30.0% | |
| TAGTCCCTAAACTTAAATAG+GGG | + | chr3.3:77789822-77789841 | MS.gene049440:intron | 30.0% | |
| TATGTTTACCACTGATGAAA+TGG | - | chr3.3:77791473-77791492 | None:intergenic | 30.0% | |
| TGAGAAAACTCAATATCTCA+AGG | - | chr3.3:77790177-77790196 | None:intergenic | 30.0% | |
| TTAGGTTAACAACTGTTAAG+AGG | + | chr3.3:77790494-77790513 | MS.gene049440:intron | 30.0% | |
| TTCATTGTATTTCCTCGTTA+AGG | + | chr3.3:77790527-77790546 | MS.gene049440:intron | 30.0% | |
| TTGTGGTTTAGTTGAATAAC+TGG | + | chr3.3:77789626-77789645 | MS.gene049440:intron | 30.0% | |
| TTTGACATTAATAACTACCC+AGG | - | chr3.3:77791625-77791644 | None:intergenic | 30.0% | |
| ! | AAACCCCCTATTTAAGTTTA+GGG | - | chr3.3:77789829-77789848 | None:intergenic | 30.0% |
| ! | AATATAAGATGGAGTATCAC+TGG | + | chr3.3:77790948-77790967 | MS.gene049440:intron | 30.0% |
| ! | ACCATTTTATGTTATTGGTC+TGG | + | chr3.3:77790869-77790888 | MS.gene049440:intron | 30.0% |
| ! | ATATTTCAATACACTTGGTG+TGG | + | chr3.3:77790907-77790926 | MS.gene049440:intron | 30.0% |
| ! | GAGGTACTCAAAAATTGTAT+TGG | + | chr3.3:77789882-77789901 | MS.gene049440:intron | 30.0% |
| ! | GCCATGCCAAATTTTTATAA+AGG | + | chr3.3:77792006-77792025 | MS.gene049440:intron | 30.0% |
| ! | GTATAGTTTAAGACATGCTA+TGG | - | chr3.3:77792259-77792278 | None:intergenic | 30.0% |
| ! | TGAAAATGAATTTGCTCTTG+TGG | + | chr3.3:77791105-77791124 | MS.gene049440:intron | 30.0% |
| ! | TGTATGTTTGGTTTACTTGT+GGG | + | chr3.3:77789288-77789307 | MS.gene049440:intron | 30.0% |
| ! | TTGTATGTTTGGTTTACTTG+TGG | + | chr3.3:77789287-77789306 | MS.gene049440:intron | 30.0% |
| !! | CTCATTTGTGTTATTTGGTT+TGG | + | chr3.3:77790767-77790786 | MS.gene049440:intron | 30.0% |
| !!! | AATGCATCTTTTTTACAGCT+TGG | + | chr3.3:77791418-77791437 | MS.gene049440:intron | 30.0% |
| !!! | GAGATTTTTTTTGAACCATG+AGG | + | chr3.3:77790388-77790407 | MS.gene049440:intron | 30.0% |
| !!! | GTGATGCTTTTGGTTTAAAT+CGG | + | chr3.3:77791127-77791146 | MS.gene049440:intron | 30.0% |
| !!! | TAAGGTTTTGTTTGTGAGTT+TGG | - | chr3.3:77790067-77790086 | None:intergenic | 30.0% |
| AAAATTTGGCATGGCCTAAA+AGG | - | chr3.3:77792001-77792020 | None:intergenic | 35.0% | |
| AAATTATAGGGGATTCAGTC+AGG | + | chr3.3:77790352-77790371 | MS.gene049440:intron | 35.0% | |
| AAGACATGCTATGGGTTTAA+GGG | - | chr3.3:77792250-77792269 | None:intergenic | 35.0% | |
| AAGGCAAATAATCCTTAACG+AGG | - | chr3.3:77790542-77790561 | None:intergenic | 35.0% | |
| AATTATAGGGGATTCAGTCA+GGG | + | chr3.3:77790353-77790372 | MS.gene049440:intron | 35.0% | |
| ACACAACATAGATTTGGCAT+AGG | - | chr3.3:77791558-77791577 | None:intergenic | 35.0% | |
| AGAAACATGTTGCAAAACCT+TGG | + | chr3.3:77792346-77792365 | MS.gene049440:CDS | 35.0% | |
| AGAAACCTCATCTTGCAATA+AGG | - | chr3.3:77791808-77791827 | None:intergenic | 35.0% | |
| AGCCTTACACAACATAGATT+TGG | - | chr3.3:77791564-77791583 | None:intergenic | 35.0% | |
| AGTCCCTAAACTTAAATAGG+GGG | + | chr3.3:77789823-77789842 | MS.gene049440:intron | 35.0% | |
| ATCTTGCAATAAGGCTTTCA+AGG | - | chr3.3:77791799-77791818 | None:intergenic | 35.0% | |
| CACAACATAGATTTGGCATA+GGG | - | chr3.3:77791557-77791576 | None:intergenic | 35.0% | |
| CGAGTTTGAATTTGGTCAAT+TGG | - | chr3.3:77788799-77788818 | None:intergenic | 35.0% | |
| CTCAAAAATTGTATTGGAGG+AGG | + | chr3.3:77789888-77789907 | MS.gene049440:intron | 35.0% | |
| GAAAGGAAGATGTTCAATCT+AGG | + | chr3.3:77789226-77789245 | MS.gene049440:CDS | 35.0% | |
| GACGCATATTTCAATACACT+TGG | + | chr3.3:77790902-77790921 | MS.gene049440:intron | 35.0% | |
| GAGCGTTAAGAAATAGGAAA+TGG | - | chr3.3:77791169-77791188 | None:intergenic | 35.0% | |
| GCTATGTAAAATACAAGCCT+GGG | + | chr3.3:77791605-77791624 | MS.gene049440:intron | 35.0% | |
| GTAAACATAAATGCTGCACT+AGG | + | chr3.3:77791484-77791503 | MS.gene049440:intron | 35.0% | |
| GTTAACAACTGTTAAGAGGA+GGG | + | chr3.3:77790498-77790517 | MS.gene049440:intron | 35.0% | |
| TAAGACATGCTATGGGTTTA+AGG | - | chr3.3:77792251-77792270 | None:intergenic | 35.0% | |
| TACAAAACATCCCCTCAAAA+TGG | + | chr3.3:77789860-77789879 | MS.gene049440:intron | 35.0% | |
| TATTGCAAGATGAGGTTTCT+CGG | + | chr3.3:77791808-77791827 | MS.gene049440:intron | 35.0% | |
| TGCCAAATCTATGTTGTGTA+AGG | + | chr3.3:77791559-77791578 | MS.gene049440:intron | 35.0% | |
| TGGTAAGATTGTCCAAATAC+CGG | - | chr3.3:77791069-77791088 | None:intergenic | 35.0% | |
| TGTTTACCACTGATGAAATG+GGG | - | chr3.3:77791471-77791490 | None:intergenic | 35.0% | |
| TTATTCTTTGCACTCGTTCA+AGG | + | chr3.3:77791368-77791387 | MS.gene049440:CDS | 35.0% | |
| TTTGAAAAGGTTGAGAGGAA+AGG | + | chr3.3:77789209-77789228 | MS.gene049440:CDS | 35.0% | |
| ! | ATCATCATCTCTTTTCCTCA+TGG | - | chr3.3:77790406-77790425 | None:intergenic | 35.0% |
| ! | ATCCATCGAAAAAGTCTTGT+AGG | + | chr3.3:77791654-77791673 | MS.gene049440:intron | 35.0% |
| ! | ATTGTATTGGAGGAGGATTT+TGG | + | chr3.3:77789895-77789914 | MS.gene049440:intron | 35.0% |
| ! | CAAACCCCCTATTTAAGTTT+AGG | - | chr3.3:77789830-77789849 | None:intergenic | 35.0% |
| ! | TCCATCGAAAAAGTCTTGTA+GGG | + | chr3.3:77791655-77791674 | MS.gene049440:intron | 35.0% |
| ! | TGAGTAGAGCGTTAAGAAAT+AGG | - | chr3.3:77791175-77791194 | None:intergenic | 35.0% |
| ! | TTTGAGTACCTCCATTTTGA+GGG | - | chr3.3:77789874-77789893 | None:intergenic | 35.0% |
| !! | GGGGGTACCAAAATAAAAAT+CGG | - | chr3.3:77792230-77792249 | None:intergenic | 35.0% |
| !! | TTTTCGTTGGTAAGTGGTAT+GGG | + | chr3.3:77791308-77791327 | MS.gene049440:CDS | 35.0% |
| !! | TTTTGAGTACCTCCATTTTG+AGG | - | chr3.3:77789875-77789894 | None:intergenic | 35.0% |
| !! | TTTTGTTTGTGAGTTTGGAG+AGG | - | chr3.3:77790062-77790081 | None:intergenic | 35.0% |
| !!! | ATTGGGTTTTGAAGTTGTTG+TGG | - | chr3.3:77788781-77788800 | None:intergenic | 35.0% |
| !!! | TACAAGACTTTTTCGATGGA+TGG | - | chr3.3:77791655-77791674 | None:intergenic | 35.0% |
| !!! | TGTGTTTTGAAAAGGTTGAG+AGG | + | chr3.3:77789204-77789223 | MS.gene049440:CDS | 35.0% |
| AAAACATCCCCTCAAAATGG+AGG | + | chr3.3:77789863-77789882 | MS.gene049440:intron | 40.0% | |
| AAATTCCGAGCCTGAATCAA+AGG | - | chr3.3:77789150-77789169 | None:intergenic | 40.0% | |
| AATGCAAGACACATAAGACC+TGG | - | chr3.3:77792037-77792056 | None:intergenic | 40.0% | |
| ACAGGACAGATTGCCTAAAA+GGG | + | chr3.3:77790701-77790720 | MS.gene049440:intron | 40.0% | |
| ACATAGATTTGGCATAGGGT+AGG | - | chr3.3:77791553-77791572 | None:intergenic | 40.0% | |
| ACCACTTACCAACGAAAACA+TGG | - | chr3.3:77791306-77791325 | None:intergenic | 40.0% | |
| ACTGCATTTCCTGCTTGATT+TGG | - | chr3.3:77791338-77791357 | None:intergenic | 40.0% | |
| AGACATGCTATGGGTTTAAG+GGG | - | chr3.3:77792249-77792268 | None:intergenic | 40.0% | |
| AGTAATACCAGCATTCACTC+CGG | - | chr3.3:77789184-77789203 | None:intergenic | 40.0% | |
| ATGATATTGTAGGCTCTTGC+TGG | + | chr3.3:77789120-77789139 | MS.gene049440:intron | 40.0% | |
| CAACACAACCACAACTATCA+AGG | + | chr3.3:77790219-77790238 | MS.gene049440:intron | 40.0% | |
| CAATAAGGCTTTCAAGGTCA+TGG | - | chr3.3:77791793-77791812 | None:intergenic | 40.0% | |
| CATAAATGCTGCACTAGGAA+TGG | + | chr3.3:77791489-77791508 | MS.gene049440:intron | 40.0% | |
| CATACATGCACCTACCTAAT+AGG | - | chr3.3:77791681-77791700 | None:intergenic | 40.0% | |
| CATGCACAACTTGTGCTATA+AGG | + | chr3.3:77790826-77790845 | MS.gene049440:intron | 40.0% | |
| GATAGTTGTGGTTGTGTTGA+TGG | - | chr3.3:77790218-77790237 | None:intergenic | 40.0% | |
| GGCTATGTAAAATACAAGCC+TGG | + | chr3.3:77791604-77791623 | MS.gene049440:intron | 40.0% | |
| GGGTAAAAGGAAGGAGAAAA+GGG | + | chr3.3:77789784-77789803 | MS.gene049440:intron | 40.0% | |
| GGTTAACAACTGTTAAGAGG+AGG | + | chr3.3:77790497-77790516 | MS.gene049440:intron | 40.0% | |
| GTTTACCACTGATGAAATGG+GGG | - | chr3.3:77791470-77791489 | None:intergenic | 40.0% | |
| TAGGCAAGAACATCTCACTT+GGG | - | chr3.3:77792186-77792205 | None:intergenic | 40.0% | |
| TGGGTAAAAGGAAGGAGAAA+AGG | + | chr3.3:77789783-77789802 | MS.gene049440:intron | 40.0% | |
| TTTACATAGCCCAGTTGACT+TGG | - | chr3.3:77791595-77791614 | None:intergenic | 40.0% | |
| TTTGTGAGTTTGGAGAGGAA+GGG | - | chr3.3:77790057-77790076 | None:intergenic | 40.0% | |
| ! | AAAGTCTTGTAGGGCCTATT+AGG | + | chr3.3:77791664-77791683 | MS.gene049440:intron | 40.0% |
| ! | TATTGGAGGAGGATTTTGGA+GGG | + | chr3.3:77789899-77789918 | MS.gene049440:intron | 40.0% |
| ! | TCACACAACCTTGATAGTTG+TGG | - | chr3.3:77790230-77790249 | None:intergenic | 40.0% |
| ! | TCTCGTAATTCTGAAGACCA+AGG | - | chr3.3:77792366-77792385 | None:intergenic | 40.0% |
| ! | TTGAGGGGATGTTTTGTATG+AGG | - | chr3.3:77789858-77789877 | None:intergenic | 40.0% |
| ! | TTGAGTACCTCCATTTTGAG+GGG | - | chr3.3:77789873-77789892 | None:intergenic | 40.0% |
| ! | TTTGCGAGTTTCAAGTGGAT+TGG | + | chr3.3:77789748-77789767 | MS.gene049440:intron | 40.0% |
| !! | ATACCATCTTTTGAGAAGGG+TGG | - | chr3.3:77790641-77790660 | None:intergenic | 40.0% |
| !! | GAAAGCCTTATTGCAAGATG+AGG | + | chr3.3:77791800-77791819 | MS.gene049440:intron | 40.0% |
| !! | GTTTTCGTTGGTAAGTGGTA+TGG | + | chr3.3:77791307-77791326 | MS.gene049440:CDS | 40.0% |
| !! | TGAGGGTTAAGAGAAGCATT+AGG | - | chr3.3:77788985-77789004 | None:intergenic | 40.0% |
| !!! | CGGAATTTTGCTGTTATGAC+CGG | + | chr3.3:77789162-77789181 | MS.gene049440:CDS | 40.0% |
| AAAAGCGGAAGATGCATCAC+CGG | - | chr3.3:77788950-77788969 | None:intergenic | 45.0% | |
| ACAAGGAAAGCAAGGAGCAA+TGG | + | chr3.3:77788741-77788760 | MS.gene049440:CDS | 45.0% | |
| ACTACTCACTAGGACTCCAA+GGG | - | chr3.3:77791529-77791548 | None:intergenic | 45.0% | |
| AGTGTTTCTTGTGTCGTGTC+GGG | - | chr3.3:77789416-77789435 | None:intergenic | 45.0% | |
| ATATTGTAGGCTCTTGCTGG+AGG | + | chr3.3:77789123-77789142 | MS.gene049440:intron | 45.0% | |
| CAAAGCCTATAAGGGTAGAC+AGG | + | chr3.3:77790683-77790702 | MS.gene049440:intron | 45.0% | |
| CACTAGGAATGGAAAACGGT+CGG | + | chr3.3:77791500-77791519 | MS.gene049440:intron | 45.0% | |
| CAGTGTTTCTTGTGTCGTGT+CGG | - | chr3.3:77789417-77789436 | None:intergenic | 45.0% | |
| CTAGGCAAGAACATCTCACT+TGG | - | chr3.3:77792187-77792206 | None:intergenic | 45.0% | |
| CTCTGTTTGCGAGTTTCAAG+TGG | + | chr3.3:77789743-77789762 | MS.gene049440:intron | 45.0% | |
| CTGTCTACCCTTATAGGCTT+TGG | - | chr3.3:77790685-77790704 | None:intergenic | 45.0% | |
| CTTTGCCTCTACTCAATGAC+AGG | + | chr3.3:77792419-77792438 | MS.gene049440:CDS | 45.0% | |
| GACAGGACAGATTGCCTAAA+AGG | + | chr3.3:77790700-77790719 | MS.gene049440:intron | 45.0% | |
| GACATGCTATGGGTTTAAGG+GGG | - | chr3.3:77792248-77792267 | None:intergenic | 45.0% | |
| GCATAGTGAGTATCTTCAGC+AGG | - | chr3.3:77792319-77792338 | None:intergenic | 45.0% | |
| GCTGCACTAGGAATGGAAAA+CGG | + | chr3.3:77791496-77791515 | MS.gene049440:intron | 45.0% | |
| GTTTGTGAGTTTGGAGAGGA+AGG | - | chr3.3:77790058-77790077 | None:intergenic | 45.0% | |
| TAGTACCCCCATTTCATCAG+TGG | + | chr3.3:77791462-77791481 | MS.gene049440:intron | 45.0% | |
| TAGTGAGTATCTTCAGCAGG+TGG | - | chr3.3:77792316-77792335 | None:intergenic | 45.0% | |
| TCCAGTGTCCAACACAAACA+CGG | - | chr3.3:77789504-77789523 | None:intergenic | 45.0% | |
| TCTGTCCTGTCTACCCTTAT+AGG | - | chr3.3:77790691-77790710 | None:intergenic | 45.0% | |
| TCTTGTAGGGCCTATTAGGT+AGG | + | chr3.3:77791668-77791687 | MS.gene049440:intron | 45.0% | |
| TCTTTGCACTCGTTCAAGGT+GGG | + | chr3.3:77791372-77791391 | MS.gene049440:CDS | 45.0% | |
| TTCTCTTAACCCTCAAGCCA+TGG | + | chr3.3:77788990-77789009 | MS.gene049440:CDS | 45.0% | |
| TTCTTTGCACTCGTTCAAGG+TGG | + | chr3.3:77791371-77791390 | MS.gene049440:CDS | 45.0% | |
| ! | CAAGGAGCAATGGTGTTGAA+AGG | + | chr3.3:77788751-77788770 | MS.gene049440:CDS | 45.0% |
| ! | GTATTGGAGGAGGATTTTGG+AGG | + | chr3.3:77789898-77789917 | MS.gene049440:intron | 45.0% |
| ! | TGCTTGTTGAAGAGAAGCCA+TGG | - | chr3.3:77789010-77789029 | None:intergenic | 45.0% |
| !! | ACCCATGAAAGCACCAATAG+CGG | - | chr3.3:77788920-77788939 | None:intergenic | 45.0% |
| !! | CGAGTTTCAAGTGGATTGGA+GGG | + | chr3.3:77789752-77789771 | MS.gene049440:intron | 45.0% |
| !! | GAGAGCTTTGGGTAAAAGGA+AGG | + | chr3.3:77789775-77789794 | MS.gene049440:intron | 45.0% |
| !! | GAGTTTCAAGTGGATTGGAG+GGG | + | chr3.3:77789753-77789772 | MS.gene049440:intron | 45.0% |
| !! | GCCATGTTTTCGTTGGTAAG+TGG | + | chr3.3:77791302-77791321 | MS.gene049440:CDS | 45.0% |
| !! | GGGTTAAGAGAAGCATTAGG+CGG | - | chr3.3:77788982-77789001 | None:intergenic | 45.0% |
| !! | GTGGTTGTGTTGATGGTAGA+AGG | - | chr3.3:77790211-77790230 | None:intergenic | 45.0% |
| !! | TGCTCTTGTGGTGATGCTTT+TGG | + | chr3.3:77791117-77791136 | MS.gene049440:intron | 45.0% |
| !! | TGTTGGTTCCGTGTTTGTGT+TGG | + | chr3.3:77789493-77789512 | MS.gene049440:intron | 45.0% |
| !! | TTAAGAGAAGCATTAGGCGG+TGG | - | chr3.3:77788979-77788998 | None:intergenic | 45.0% |
| !!! | GCCCTACAAGACTTTTTCGA+TGG | - | chr3.3:77791659-77791678 | None:intergenic | 45.0% |
| !! | AATCATATTTATATATTAAA+AGG | + | chr3.3:77790469-77790488 | MS.gene049440:intron | 5.0% |
| !! | TTAATATATAAATATGATTA+TGG | - | chr3.3:77790468-77790487 | None:intergenic | 5.0% |
| !!! | TATTTGTATTTTTTTTTAAA+AGG | + | chr3.3:77789672-77789691 | MS.gene049440:intron | 5.0% |
| AGCTCTCTGATGCCGGTATT+TGG | + | chr3.3:77791054-77791073 | MS.gene049440:intron | 50.0% | |
| AGGCAGAGCCAAAGCCTATA+AGG | + | chr3.3:77790674-77790693 | MS.gene049440:intron | 50.0% | |
| ATGGGTGGACCAAATCAAGC+AGG | + | chr3.3:77791326-77791345 | MS.gene049440:CDS | 50.0% | |
| CACTACTCACTAGGACTCCA+AGG | - | chr3.3:77791530-77791549 | None:intergenic | 50.0% | |
| CTGCCACCCTTCTCAAAAGA+TGG | + | chr3.3:77790635-77790654 | MS.gene049440:intron | 50.0% | |
| CTTGAAGAGCTCTCTGATGC+CGG | + | chr3.3:77791047-77791066 | MS.gene049440:intron | 50.0% | |
| GAAGAGAAGCCATGGCTTGA+GGG | - | chr3.3:77789002-77789021 | None:intergenic | 50.0% | |
| GAGGTCCTTTGATTCAGGCT+CGG | + | chr3.3:77789142-77789161 | MS.gene049440:CDS | 50.0% | |
| GAGTTTGGAGAGGAAGGGAA+GGG | - | chr3.3:77790052-77790071 | None:intergenic | 50.0% | |
| GCAGGAAATGCAGTCACATC+TGG | + | chr3.3:77791344-77791363 | MS.gene049440:CDS | 50.0% | |
| GCTTTCATGGGTACTCTCAC+CGG | + | chr3.3:77788928-77788947 | MS.gene049440:CDS | 50.0% | |
| GGCAGAGCCAAAGCCTATAA+GGG | + | chr3.3:77790675-77790694 | MS.gene049440:intron | 50.0% | |
| GGCTTCTCTTCAACAAGCAC+AGG | + | chr3.3:77789011-77789030 | MS.gene049440:CDS | 50.0% | |
| GGGATTCAGTCAGGGAAATG+AGG | + | chr3.3:77790361-77790380 | MS.gene049440:intron | 50.0% | |
| GTTATGACCGGAGTGAATGC+TGG | + | chr3.3:77789174-77789193 | MS.gene049440:CDS | 50.0% | |
| TAGGGTAGGCACTACTCACT+AGG | - | chr3.3:77791539-77791558 | None:intergenic | 50.0% | |
| TCCGTGTTTGTGTTGGACAC+TGG | + | chr3.3:77789500-77789519 | MS.gene049440:intron | 50.0% | |
| TGAAGAGAAGCCATGGCTTG+AGG | - | chr3.3:77789003-77789022 | None:intergenic | 50.0% | |
| TGAGTTTGGAGAGGAAGGGA+AGG | - | chr3.3:77790053-77790072 | None:intergenic | 50.0% | |
| TGCTGGAGGTCCTTTGATTC+AGG | + | chr3.3:77789137-77789156 | MS.gene049440:CDS | 50.0% | |
| ! | CAATCAGATGTGCTGCTGCT+AGG | + | chr3.3:77789532-77789551 | MS.gene049440:intron | 50.0% |
| ! | GCATTTTGTTCGTGCTCACC+TGG | - | chr3.3:77791403-77791422 | None:intergenic | 50.0% |
| ! | GCCGCTATTGGTGCTTTCAT+GGG | + | chr3.3:77788916-77788935 | MS.gene049440:CDS | 50.0% |
| ! | TCGTTGGTAAGTGGTATGGG+TGG | + | chr3.3:77791311-77791330 | MS.gene049440:CDS | 50.0% |
| ! | TGCCGCTATTGGTGCTTTCA+TGG | + | chr3.3:77788915-77788934 | MS.gene049440:CDS | 50.0% |
| !! | AGGGGAGAGCTTTGGGTAAA+AGG | + | chr3.3:77789771-77789790 | MS.gene049440:intron | 50.0% |
| !! | CATCTTTTGAGAAGGGTGGC+AGG | - | chr3.3:77790637-77790656 | None:intergenic | 50.0% |
| !! | GCGAGTTTCAAGTGGATTGG+AGG | + | chr3.3:77789751-77789770 | MS.gene049440:intron | 50.0% |
| !!! | TTCTGGGGCCATGTTTTCGT+TGG | + | chr3.3:77791295-77791314 | MS.gene049440:CDS | 50.0% |
| ACCAATAGCGGCACCTTGAG+CGG | - | chr3.3:77788908-77788927 | None:intergenic | 55.0% | |
| ACTCACTAGGACTCCAAGGG+TGG | - | chr3.3:77791526-77791545 | None:intergenic | 55.0% | |
| AGGCGGTGGAGTTGGAAAAG+CGG | - | chr3.3:77788965-77788984 | None:intergenic | 55.0% | |
| GGATTGGAGGGGAGAGCTTT+GGG | + | chr3.3:77789764-77789783 | MS.gene049440:intron | 55.0% | |
| TTGGAGAGGAAGGGAAGGGA+GGG | - | chr3.3:77790048-77790067 | None:intergenic | 55.0% | |
| TTTGGAGAGGAAGGGAAGGG+AGG | - | chr3.3:77790049-77790068 | None:intergenic | 55.0% | |
| ! | CTTTGGGGGAGAAAAGTGGG+GGG | - | chr3.3:77790025-77790044 | None:intergenic | 55.0% |
| ! | GAAGCATTAGGCGGTGGAGT+TGG | - | chr3.3:77788973-77788992 | None:intergenic | 55.0% |
| ! | TGGATTGGAGGGGAGAGCTT+TGG | + | chr3.3:77789763-77789782 | MS.gene049440:intron | 55.0% |
| !! | AGGGCTTTGGGGGAGAAAAG+TGG | - | chr3.3:77790029-77790048 | None:intergenic | 55.0% |
| !! | CGTTCAAGGTGGGCTTTTCC+AGG | + | chr3.3:77791382-77791401 | MS.gene049440:CDS | 55.0% |
| !! | GCTTTGGGGGAGAAAAGTGG+GGG | - | chr3.3:77790026-77790045 | None:intergenic | 55.0% |
| !! | GGCTTTGGGGGAGAAAAGTG+GGG | - | chr3.3:77790027-77790046 | None:intergenic | 55.0% |
| !! | GGGCTTTGGGGGAGAAAAGT+GGG | - | chr3.3:77790028-77790047 | None:intergenic | 55.0% |
| !!! | ATGGCGGCAGCTTTTGGTTC+TGG | + | chr3.3:77791278-77791297 | MS.gene049440:CDS | 55.0% |
| !!! | TGGCGGCAGCTTTTGGTTCT+GGG | + | chr3.3:77791279-77791298 | MS.gene049440:CDS | 55.0% |
| AGGAAGGGAAGGGAGGGCTT+TGG | - | chr3.3:77790042-77790061 | None:intergenic | 60.0% | |
| AGTGACGACGGCGGCTTCAA+CGG | - | chr3.3:77788875-77788894 | None:intergenic | 60.0% | |
| GAAGGGAAGGGAGGGCTTTG+GGG | - | chr3.3:77790040-77790059 | None:intergenic | 60.0% | |
| GGAAGGGAAGGGAGGGCTTT+GGG | - | chr3.3:77790041-77790060 | None:intergenic | 60.0% | |
| ! | AAGGGAAGGGAGGGCTTTGG+GGG | - | chr3.3:77790039-77790058 | None:intergenic | 60.0% |
| ! | TGCAGCATGGCGGCAGCTTT+TGG | + | chr3.3:77791272-77791291 | MS.gene049440:intron | 60.0% |
| !!! | GGCGGCAGCTTTTGGTTCTG+GGG | + | chr3.3:77791280-77791299 | MS.gene049440:CDS | 60.0% |
| ACTACCACCAGCGCCGCTCA+AGG | + | chr3.3:77788892-77788911 | MS.gene049440:CDS | 65.0% | |
| GACGGCGGCTTCAACGGCAA+TGG | - | chr3.3:77788869-77788888 | None:intergenic | 65.0% | |
| GGAAAACGGTCGGCCACCCT+TGG | + | chr3.3:77791510-77791529 | MS.gene049440:intron | 65.0% | |
| ! | GCTGGTGGTAGTGACGACGG+CGG | - | chr3.3:77788884-77788903 | None:intergenic | 65.0% |
| !! | GCCGCTCAAGGTGCCGCTAT+TGG | + | chr3.3:77788904-77788923 | MS.gene049440:CDS | 65.0% |
| !! | GGCGCTGGTGGTAGTGACGA+CGG | - | chr3.3:77788887-77788906 | None:intergenic | 65.0% |
| AGCGGCACCTTGAGCGGCGC+TGG | - | chr3.3:77788902-77788921 | None:intergenic | 75.0% | |
| ! | GGCACCTTGAGCGGCGCTGG+TGG | - | chr3.3:77788899-77788918 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 77788736 | 77792444 | 77788736 | ID=MS.gene049440 |
| chr3.3 | mRNA | 77788736 | 77792444 | 77788736 | ID=MS.gene049440.t1;Parent=MS.gene049440 |
| chr3.3 | exon | 77788736 | 77789032 | 77788736 | ID=MS.gene049440.t1.exon1;Parent=MS.gene049440.t1 |
| chr3.3 | CDS | 77788736 | 77789032 | 77788736 | ID=cds.MS.gene049440.t1;Parent=MS.gene049440.t1 |
| chr3.3 | exon | 77789132 | 77789247 | 77789132 | ID=MS.gene049440.t1.exon2;Parent=MS.gene049440.t1 |
| chr3.3 | CDS | 77789132 | 77789247 | 77789132 | ID=cds.MS.gene049440.t1;Parent=MS.gene049440.t1 |
| chr3.3 | exon | 77791277 | 77791403 | 77791277 | ID=MS.gene049440.t1.exon3;Parent=MS.gene049440.t1 |
| chr3.3 | CDS | 77791277 | 77791403 | 77791277 | ID=cds.MS.gene049440.t1;Parent=MS.gene049440.t1 |
| chr3.3 | exon | 77792292 | 77792444 | 77792292 | ID=MS.gene049440.t1.exon4;Parent=MS.gene049440.t1 |
| chr3.3 | CDS | 77792292 | 77792444 | 77792292 | ID=cds.MS.gene049440.t1;Parent=MS.gene049440.t1 |
| Gene Sequence |
| Protein sequence |
