Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene065756.t1 | RHN52768.1 | 59.9 | 362 | 11 | 1 | 117 | 344 | 288 | 649 | 6.50E-104 | 387.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene065756.t1 | D7SFH9 | 52.6 | 135 | 58 | 3 | 215 | 343 | 973 | 1107 | 1.9e-32 | 141.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene065756.t1 | G7KMN3 | 59.9 | 362 | 11 | 1 | 117 | 344 | 291 | 652 | 4.7e-104 | 387.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene051492 | MS.gene065756 | 0.804434 | 2.16E-49 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene065756.t1 | MTR_6g083780 | 93.077 | 130 | 9 | 0 | 215 | 344 | 523 | 652 | 2.09e-81 | 260 |
MS.gene065756.t1 | MTR_6g083780 | 69.032 | 155 | 35 | 2 | 79 | 220 | 240 | 394 | 3.01e-59 | 202 |
MS.gene065756.t1 | MTR_6g083210 | 75.573 | 131 | 31 | 1 | 215 | 344 | 174 | 304 | 1.23e-65 | 209 |
MS.gene065756.t1 | MTR_6g083210 | 64.444 | 45 | 16 | 0 | 176 | 220 | 1 | 45 | 9.45e-11 | 62.4 |
MS.gene065756.t1 | MTR_6g083290 | 75.000 | 128 | 31 | 1 | 215 | 341 | 186 | 313 | 3.41e-63 | 204 |
MS.gene065756.t1 | MTR_6g083300 | 74.219 | 128 | 32 | 1 | 215 | 341 | 174 | 301 | 1.55e-62 | 201 |
MS.gene065756.t1 | MTR_6g082870 | 68.667 | 150 | 45 | 2 | 197 | 344 | 512 | 661 | 7.00e-62 | 209 |
MS.gene065756.t1 | MTR_6g082870 | 51.402 | 107 | 50 | 1 | 117 | 221 | 297 | 403 | 6.76e-21 | 94.4 |
MS.gene065756.t1 | MTR_6g082950 | 72.519 | 131 | 35 | 1 | 215 | 344 | 294 | 424 | 1.25e-61 | 203 |
MS.gene065756.t1 | MTR_6g082950 | 50.459 | 109 | 51 | 1 | 116 | 221 | 58 | 166 | 6.13e-23 | 99.4 |
MS.gene065756.t1 | MTR_6g083270 | 73.643 | 129 | 33 | 1 | 215 | 342 | 329 | 457 | 2.44e-61 | 203 |
MS.gene065756.t1 | MTR_6g082830 | 70.992 | 131 | 36 | 2 | 215 | 344 | 174 | 303 | 3.02e-60 | 196 |
MS.gene065756.t1 | MTR_6g082830 | 67.391 | 46 | 15 | 0 | 176 | 221 | 1 | 46 | 5.54e-12 | 66.2 |
MS.gene065756.t1 | MTR_6g083760 | 71.756 | 131 | 36 | 1 | 215 | 344 | 494 | 624 | 3.63e-60 | 204 |
MS.gene065756.t1 | MTR_6g083760 | 49.123 | 114 | 54 | 1 | 112 | 221 | 253 | 366 | 1.64e-22 | 99.0 |
MS.gene065756.t1 | MTR_6g082860 | 70.992 | 131 | 36 | 2 | 215 | 344 | 230 | 359 | 1.09e-59 | 196 |
MS.gene065756.t1 | MTR_6g082860 | 51.485 | 101 | 45 | 1 | 125 | 221 | 2 | 102 | 7.09e-22 | 95.5 |
MS.gene065756.t1 | MTR_6g083740 | 74.590 | 122 | 30 | 1 | 224 | 344 | 122 | 243 | 8.62e-59 | 190 |
MS.gene065756.t1 | MTR_6g083740 | 68.889 | 45 | 14 | 0 | 176 | 220 | 1 | 45 | 4.67e-11 | 62.8 |
MS.gene065756.t1 | MTR_1g110140 | 58.730 | 126 | 49 | 2 | 215 | 338 | 226 | 350 | 7.52e-45 | 157 |
MS.gene065756.t1 | MTR_1g110140 | 43.299 | 97 | 50 | 2 | 127 | 220 | 2 | 96 | 2.82e-15 | 76.3 |
MS.gene065756.t1 | MTR_8g104520 | 56.818 | 132 | 53 | 3 | 215 | 342 | 514 | 645 | 2.60e-44 | 161 |
MS.gene065756.t1 | MTR_8g104520 | 56.944 | 72 | 31 | 0 | 150 | 221 | 307 | 378 | 1.20e-17 | 84.3 |
MS.gene065756.t1 | MTR_1g110220 | 51.316 | 152 | 72 | 2 | 188 | 337 | 396 | 547 | 1.01e-43 | 158 |
MS.gene065756.t1 | MTR_1g110220 | 40.000 | 105 | 62 | 1 | 145 | 249 | 244 | 347 | 1.18e-15 | 78.2 |
MS.gene065756.t1 | MTR_7g082430 | 48.466 | 163 | 79 | 3 | 176 | 336 | 448 | 607 | 7.22e-43 | 157 |
MS.gene065756.t1 | MTR_7g082430 | 35.398 | 113 | 58 | 3 | 121 | 220 | 245 | 355 | 4.50e-14 | 73.6 |
MS.gene065756.t1 | MTR_7g085860 | 55.738 | 122 | 54 | 0 | 215 | 336 | 335 | 456 | 1.16e-41 | 151 |
MS.gene065756.t1 | MTR_7g085860 | 43.421 | 76 | 42 | 1 | 147 | 221 | 173 | 248 | 1.52e-12 | 68.6 |
MS.gene065756.t1 | MTR_1g027160 | 50.000 | 132 | 62 | 1 | 204 | 331 | 157 | 288 | 1.85e-41 | 147 |
MS.gene065756.t1 | MTR_7g082380 | 44.848 | 165 | 85 | 3 | 176 | 337 | 194 | 355 | 8.73e-41 | 147 |
MS.gene065756.t1 | MTR_7g082380 | 42.169 | 83 | 48 | 0 | 138 | 220 | 19 | 101 | 7.53e-15 | 75.1 |
MS.gene065756.t1 | MTR_7g082510 | 55.285 | 123 | 54 | 1 | 215 | 336 | 516 | 638 | 1.25e-40 | 151 |
MS.gene065756.t1 | MTR_7g082510 | 39.024 | 82 | 50 | 0 | 139 | 220 | 305 | 386 | 9.52e-14 | 72.8 |
MS.gene065756.t1 | MTR_1g026990 | 44.586 | 157 | 83 | 2 | 176 | 331 | 135 | 288 | 1.26e-40 | 145 |
MS.gene065756.t1 | MTR_1g027250 | 41.341 | 179 | 100 | 3 | 155 | 331 | 113 | 288 | 2.65e-40 | 144 |
MS.gene065756.t1 | MTR_7g082490 | 54.545 | 121 | 54 | 1 | 215 | 334 | 281 | 401 | 3.80e-40 | 145 |
MS.gene065756.t1 | MTR_7g082490 | 47.297 | 74 | 39 | 0 | 147 | 220 | 99 | 172 | 4.44e-16 | 79.0 |
MS.gene065756.t1 | MTR_7g082470 | 55.645 | 124 | 53 | 1 | 215 | 336 | 504 | 627 | 4.81e-40 | 149 |
MS.gene065756.t1 | MTR_7g082470 | 40.741 | 81 | 48 | 0 | 140 | 220 | 294 | 374 | 4.40e-14 | 73.6 |
MS.gene065756.t1 | MTR_1g110260 | 54.264 | 129 | 58 | 1 | 215 | 342 | 404 | 532 | 6.60e-40 | 148 |
MS.gene065756.t1 | MTR_1g110260 | 38.400 | 125 | 70 | 2 | 117 | 239 | 176 | 295 | 4.83e-15 | 76.3 |
MS.gene065756.t1 | MTR_1g027540 | 40.782 | 179 | 101 | 3 | 155 | 331 | 215 | 390 | 3.84e-39 | 144 |
MS.gene065756.t1 | MTR_1g110230 | 53.968 | 126 | 55 | 2 | 214 | 337 | 469 | 593 | 4.64e-39 | 146 |
MS.gene065756.t1 | MTR_1g110230 | 43.878 | 98 | 54 | 1 | 150 | 247 | 286 | 382 | 8.88e-16 | 78.6 |
MS.gene065756.t1 | MTR_1g115485 | 45.963 | 161 | 82 | 3 | 176 | 334 | 494 | 651 | 5.69e-39 | 147 |
MS.gene065756.t1 | MTR_1g115485 | 34.028 | 144 | 76 | 3 | 97 | 221 | 259 | 402 | 4.40e-15 | 76.6 |
MS.gene065756.t1 | MTR_4g044393 | 53.719 | 121 | 55 | 1 | 215 | 334 | 704 | 824 | 1.59e-38 | 146 |
MS.gene065756.t1 | MTR_4g044393 | 43.836 | 73 | 41 | 0 | 149 | 221 | 503 | 575 | 5.70e-12 | 67.4 |
MS.gene065756.t1 | MTR_7g082280 | 54.098 | 122 | 54 | 1 | 215 | 334 | 597 | 718 | 1.90e-38 | 145 |
MS.gene065756.t1 | MTR_1g027460 | 46.970 | 132 | 66 | 1 | 204 | 331 | 184 | 315 | 2.42e-38 | 140 |
MS.gene065756.t1 | MTR_7g082460 | 46.012 | 163 | 83 | 3 | 176 | 336 | 483 | 642 | 3.45e-38 | 144 |
MS.gene065756.t1 | MTR_7g082460 | 38.261 | 115 | 62 | 1 | 115 | 220 | 276 | 390 | 3.92e-17 | 82.8 |
MS.gene065756.t1 | MTR_1g027320 | 46.212 | 132 | 67 | 1 | 204 | 331 | 157 | 288 | 4.94e-38 | 139 |
MS.gene065756.t1 | MTR_7g082360 | 53.719 | 121 | 53 | 2 | 215 | 334 | 208 | 326 | 3.79e-37 | 137 |
MS.gene065756.t1 | MTR_0394s0020 | 51.240 | 121 | 58 | 1 | 215 | 334 | 244 | 364 | 5.78e-37 | 137 |
MS.gene065756.t1 | MTR_7g082400 | 51.613 | 124 | 58 | 1 | 215 | 336 | 254 | 377 | 6.59e-37 | 137 |
MS.gene065756.t1 | MTR_1g027680 | 41.808 | 177 | 97 | 4 | 156 | 329 | 504 | 677 | 7.11e-37 | 140 |
MS.gene065756.t1 | MTR_7g082300 | 44.379 | 169 | 89 | 3 | 176 | 342 | 683 | 848 | 1.07e-36 | 140 |
MS.gene065756.t1 | MTR_7g082300 | 39.655 | 116 | 67 | 2 | 109 | 221 | 477 | 592 | 1.88e-15 | 77.8 |
MS.gene065756.t1 | MTR_1g027730 | 36.264 | 182 | 105 | 3 | 155 | 331 | 139 | 314 | 1.20e-36 | 135 |
MS.gene065756.t1 | MTR_1g027730 | 48.529 | 68 | 34 | 1 | 151 | 218 | 3 | 69 | 5.13e-11 | 63.5 |
MS.gene065756.t1 | MTR_1g027990 | 48.507 | 134 | 67 | 2 | 198 | 329 | 547 | 680 | 1.84e-36 | 139 |
MS.gene065756.t1 | MTR_3g028630 | 39.444 | 180 | 98 | 4 | 155 | 329 | 210 | 383 | 1.91e-36 | 136 |
MS.gene065756.t1 | MTR_3g028630 | 47.059 | 68 | 35 | 1 | 151 | 218 | 74 | 140 | 7.32e-11 | 63.5 |
MS.gene065756.t1 | MTR_1g027840 | 37.363 | 182 | 103 | 3 | 155 | 331 | 139 | 314 | 2.88e-36 | 134 |
MS.gene065756.t1 | MTR_1g027840 | 48.529 | 68 | 34 | 1 | 151 | 218 | 3 | 69 | 1.62e-11 | 65.1 |
MS.gene065756.t1 | MTR_1g027930 | 36.813 | 182 | 104 | 3 | 155 | 331 | 83 | 258 | 3.14e-36 | 133 |
MS.gene065756.t1 | MTR_1g027830 | 39.011 | 182 | 100 | 4 | 155 | 331 | 466 | 641 | 7.57e-36 | 137 |
MS.gene065756.t1 | MTR_1g028020 | 38.806 | 201 | 108 | 6 | 140 | 331 | 240 | 434 | 7.77e-36 | 137 |
MS.gene065756.t1 | MTR_1g028020 | 40.449 | 89 | 48 | 2 | 120 | 208 | 94 | 177 | 9.16e-12 | 66.6 |
MS.gene065756.t1 | MTR_7g082110 | 52.033 | 123 | 58 | 1 | 215 | 336 | 706 | 828 | 1.25e-35 | 137 |
MS.gene065756.t1 | MTR_7g082110 | 34.783 | 115 | 72 | 1 | 110 | 221 | 463 | 577 | 8.35e-13 | 69.7 |
MS.gene065756.t1 | MTR_1g027410 | 46.970 | 132 | 66 | 1 | 204 | 331 | 256 | 387 | 3.14e-35 | 132 |
MS.gene065756.t1 | MTR_1g028290 | 42.593 | 162 | 83 | 3 | 176 | 333 | 422 | 577 | 3.67e-34 | 132 |
MS.gene065756.t1 | MTR_1g028290 | 40.690 | 145 | 70 | 6 | 78 | 221 | 203 | 332 | 5.79e-17 | 82.4 |
MS.gene065756.t1 | MTR_1g028280 | 48.413 | 126 | 61 | 1 | 208 | 329 | 493 | 618 | 3.68e-34 | 132 |
MS.gene065756.t1 | MTR_1g028280 | 48.571 | 70 | 35 | 1 | 153 | 221 | 309 | 378 | 2.38e-12 | 68.2 |
MS.gene065756.t1 | MTR_1g028280 | 48.413 | 126 | 61 | 1 | 208 | 329 | 532 | 657 | 3.96e-34 | 133 |
MS.gene065756.t1 | MTR_1g028280 | 41.111 | 90 | 50 | 2 | 153 | 239 | 348 | 437 | 2.78e-12 | 68.2 |
MS.gene065756.t1 | MTR_1g028170 | 36.318 | 201 | 113 | 6 | 140 | 331 | 209 | 403 | 3.99e-34 | 130 |
MS.gene065756.t1 | MTR_1g028100 | 36.318 | 201 | 113 | 6 | 140 | 331 | 182 | 376 | 5.12e-34 | 129 |
MS.gene065756.t1 | MTR_6g045030 | 38.750 | 160 | 88 | 2 | 176 | 331 | 241 | 394 | 8.30e-34 | 129 |
MS.gene065756.t1 | MTR_6g045030 | 38.542 | 96 | 54 | 2 | 125 | 220 | 61 | 151 | 1.20e-11 | 65.9 |
MS.gene065756.t1 | MTR_1g108910 | 50.806 | 124 | 43 | 2 | 215 | 337 | 212 | 318 | 1.72e-32 | 124 |
MS.gene065756.t1 | MTR_1g031430 | 46.825 | 126 | 63 | 1 | 208 | 329 | 41 | 166 | 3.01e-32 | 119 |
MS.gene065756.t1 | MTR_1g031530 | 47.619 | 126 | 62 | 1 | 208 | 329 | 189 | 314 | 3.03e-32 | 123 |
MS.gene065756.t1 | MTR_1g031530 | 43.478 | 69 | 39 | 0 | 153 | 221 | 5 | 73 | 3.62e-11 | 63.9 |
MS.gene065756.t1 | MTR_1g031460 | 45.775 | 142 | 67 | 3 | 198 | 332 | 441 | 579 | 6.07e-32 | 126 |
MS.gene065756.t1 | MTR_1g031460 | 43.678 | 87 | 47 | 1 | 135 | 221 | 251 | 335 | 3.11e-12 | 67.8 |
MS.gene065756.t1 | MTR_4g073230 | 50.413 | 121 | 56 | 2 | 215 | 333 | 469 | 587 | 6.22e-32 | 126 |
MS.gene065756.t1 | MTR_4g073230 | 44.928 | 69 | 38 | 0 | 153 | 221 | 274 | 342 | 4.18e-11 | 64.3 |
MS.gene065756.t1 | MTR_1g031580 | 42.857 | 154 | 78 | 3 | 198 | 344 | 450 | 600 | 1.41e-31 | 125 |
MS.gene065756.t1 | MTR_1g031580 | 47.826 | 69 | 36 | 0 | 153 | 221 | 276 | 344 | 3.94e-11 | 64.7 |
MS.gene065756.t1 | MTR_1g110270 | 52.066 | 121 | 45 | 4 | 215 | 331 | 492 | 603 | 1.66e-30 | 122 |
MS.gene065756.t1 | MTR_1g110270 | 44.330 | 97 | 53 | 1 | 151 | 247 | 292 | 387 | 9.09e-17 | 81.6 |
MS.gene065756.t1 | MTR_1g031320 | 44.366 | 142 | 69 | 3 | 198 | 332 | 454 | 592 | 2.30e-30 | 122 |
MS.gene065756.t1 | MTR_1g031320 | 45.455 | 77 | 42 | 0 | 145 | 221 | 272 | 348 | 1.39e-12 | 68.9 |
MS.gene065756.t1 | MTR_1g031540 | 45.324 | 139 | 66 | 3 | 198 | 329 | 145 | 280 | 2.37e-30 | 122 |
MS.gene065756.t1 | MTR_1g031540 | 40.870 | 115 | 38 | 3 | 215 | 329 | 519 | 603 | 1.10e-15 | 78.6 |
MS.gene065756.t1 | MTR_1g031540 | 45.324 | 139 | 66 | 3 | 198 | 329 | 437 | 572 | 2.44e-30 | 122 |
MS.gene065756.t1 | MTR_1g031540 | 40.870 | 115 | 38 | 3 | 215 | 329 | 811 | 895 | 1.06e-15 | 79.0 |
MS.gene065756.t1 | MTR_1g031540 | 34.711 | 121 | 75 | 2 | 103 | 221 | 213 | 331 | 8.61e-11 | 63.9 |
MS.gene065756.t1 | MTR_1g031200 | 45.312 | 128 | 70 | 0 | 202 | 329 | 357 | 484 | 3.12e-30 | 120 |
MS.gene065756.t1 | MTR_1g031200 | 34.177 | 158 | 92 | 7 | 65 | 220 | 96 | 243 | 1.85e-13 | 71.6 |
MS.gene065756.t1 | MTR_1g110160 | 48.361 | 122 | 47 | 2 | 217 | 337 | 466 | 572 | 8.66e-30 | 120 |
MS.gene065756.t1 | MTR_1g110160 | 40.260 | 77 | 46 | 0 | 145 | 221 | 290 | 366 | 4.81e-12 | 67.4 |
MS.gene065756.t1 | MTR_1g031280 | 47.619 | 126 | 62 | 1 | 208 | 329 | 505 | 630 | 1.63e-29 | 119 |
MS.gene065756.t1 | MTR_1g031280 | 37.302 | 126 | 74 | 3 | 96 | 221 | 269 | 389 | 9.19e-12 | 66.6 |
MS.gene065756.t1 | MTR_1g027050 | 36.517 | 178 | 107 | 4 | 155 | 329 | 546 | 720 | 1.95e-29 | 119 |
MS.gene065756.t1 | MTR_1g027050 | 41.758 | 91 | 48 | 2 | 125 | 215 | 386 | 471 | 9.97e-11 | 63.5 |
MS.gene065756.t1 | MTR_1g027140 | 36.517 | 178 | 107 | 4 | 155 | 329 | 543 | 717 | 2.02e-29 | 119 |
MS.gene065756.t1 | MTR_1g027690 | 49.167 | 120 | 56 | 3 | 215 | 332 | 458 | 574 | 3.23e-29 | 118 |
MS.gene065756.t1 | MTR_1g027070 | 36.517 | 178 | 107 | 4 | 155 | 329 | 509 | 683 | 4.22e-29 | 118 |
MS.gene065756.t1 | MTR_1g027070 | 53.846 | 65 | 29 | 1 | 151 | 215 | 371 | 434 | 9.98e-12 | 66.6 |
MS.gene065756.t1 | MTR_1g027970 | 49.167 | 120 | 56 | 3 | 215 | 332 | 460 | 576 | 6.12e-29 | 117 |
MS.gene065756.t1 | MTR_1g027500 | 40.909 | 154 | 80 | 4 | 198 | 344 | 453 | 602 | 6.49e-29 | 117 |
MS.gene065756.t1 | MTR_1g027440 | 45.113 | 133 | 54 | 4 | 204 | 331 | 435 | 553 | 8.71e-29 | 117 |
MS.gene065756.t1 | MTR_1g027820 | 44.828 | 145 | 69 | 5 | 208 | 344 | 416 | 557 | 1.77e-28 | 116 |
MS.gene065756.t1 | MTR_1g031510 | 43.750 | 128 | 68 | 1 | 208 | 331 | 476 | 603 | 2.09e-27 | 113 |
MS.gene065756.t1 | MTR_1g031510 | 40.196 | 102 | 54 | 2 | 120 | 220 | 264 | 359 | 4.31e-14 | 73.6 |
MS.gene065756.t1 | MTR_1g028130 | 45.161 | 124 | 64 | 4 | 215 | 336 | 460 | 581 | 4.13e-27 | 112 |
MS.gene065756.t1 | MTR_1g028130 | 35.644 | 101 | 61 | 1 | 120 | 220 | 236 | 332 | 1.86e-12 | 68.6 |
MS.gene065756.t1 | MTR_1g028080 | 45.161 | 124 | 64 | 4 | 215 | 336 | 460 | 581 | 5.87e-27 | 112 |
MS.gene065756.t1 | MTR_1g028080 | 34.653 | 101 | 62 | 1 | 120 | 220 | 236 | 332 | 6.13e-12 | 67.0 |
MS.gene065756.t1 | MTR_1g027030 | 34.270 | 178 | 111 | 4 | 155 | 329 | 545 | 719 | 6.18e-27 | 112 |
MS.gene065756.t1 | MTR_1g027030 | 34.270 | 178 | 111 | 4 | 155 | 329 | 495 | 669 | 7.12e-27 | 112 |
MS.gene065756.t1 | MTR_1g027420 | 38.961 | 154 | 83 | 4 | 198 | 344 | 396 | 545 | 8.56e-27 | 111 |
MS.gene065756.t1 | MTR_1g027420 | 40.594 | 101 | 48 | 4 | 118 | 214 | 252 | 344 | 1.18e-11 | 66.2 |
MS.gene065756.t1 | MTR_1g026940 | 44.138 | 145 | 68 | 6 | 195 | 332 | 450 | 588 | 1.69e-26 | 110 |
MS.gene065756.t1 | MTR_1g026940 | 36.364 | 110 | 64 | 3 | 114 | 221 | 241 | 346 | 5.10e-11 | 64.3 |
MS.gene065756.t1 | MTR_1g027370 | 37.838 | 148 | 81 | 4 | 203 | 340 | 458 | 604 | 1.85e-26 | 110 |
MS.gene065756.t1 | MTR_1g027150 | 45.455 | 121 | 56 | 3 | 215 | 330 | 429 | 544 | 2.53e-26 | 110 |
MS.gene065756.t1 | MTR_1g027150 | 25.773 | 194 | 126 | 3 | 28 | 221 | 127 | 302 | 7.83e-12 | 66.6 |
MS.gene065756.t1 | MTR_0690s0010 | 45.763 | 118 | 57 | 3 | 215 | 329 | 408 | 521 | 2.98e-26 | 109 |
MS.gene065756.t1 | MTR_0690s0010 | 47.059 | 68 | 36 | 0 | 153 | 220 | 213 | 280 | 2.90e-11 | 64.7 |
MS.gene065756.t1 | MTR_6g445600 | 45.763 | 118 | 57 | 3 | 215 | 329 | 434 | 547 | 3.20e-26 | 109 |
MS.gene065756.t1 | MTR_6g445600 | 26.697 | 221 | 130 | 6 | 5 | 221 | 115 | 307 | 5.84e-12 | 67.0 |
MS.gene065756.t1 | MTR_1g027890 | 40.559 | 143 | 76 | 4 | 204 | 341 | 258 | 396 | 3.62e-26 | 108 |
MS.gene065756.t1 | MTR_1g027060 | 45.600 | 125 | 60 | 4 | 215 | 335 | 376 | 496 | 7.18e-26 | 108 |
MS.gene065756.t1 | MTR_1g027700 | 43.382 | 136 | 65 | 5 | 208 | 335 | 193 | 324 | 4.49e-25 | 103 |
MS.gene065756.t1 | MTR_1g027700 | 47.826 | 69 | 36 | 0 | 153 | 221 | 9 | 77 | 8.61e-11 | 62.8 |
MS.gene065756.t1 | MTR_3g028650 | 44.628 | 121 | 55 | 3 | 215 | 329 | 429 | 543 | 6.36e-25 | 105 |
MS.gene065756.t1 | MTR_3g028650 | 28.571 | 203 | 117 | 6 | 112 | 302 | 194 | 380 | 3.28e-11 | 64.7 |
MS.gene065756.t1 | MTR_1g027040 | 44.262 | 122 | 63 | 3 | 215 | 333 | 431 | 550 | 8.83e-25 | 105 |
MS.gene065756.t1 | MTR_1g027040 | 35.789 | 95 | 59 | 1 | 127 | 221 | 212 | 304 | 6.35e-11 | 63.9 |
MS.gene065756.t1 | MTR_1g031520 | 43.846 | 130 | 69 | 1 | 208 | 333 | 473 | 602 | 1.35e-24 | 105 |
MS.gene065756.t1 | MTR_1g031520 | 45.588 | 68 | 37 | 0 | 153 | 220 | 289 | 356 | 2.12e-11 | 65.5 |
MS.gene065756.t1 | MTR_1g027960 | 43.846 | 130 | 61 | 5 | 208 | 329 | 437 | 562 | 1.53e-24 | 104 |
MS.gene065756.t1 | MTR_1g027960 | 27.041 | 196 | 115 | 3 | 27 | 221 | 153 | 321 | 3.64e-12 | 67.8 |
MS.gene065756.t1 | MTR_1g027200 | 40.972 | 144 | 68 | 4 | 203 | 341 | 387 | 518 | 1.75e-24 | 104 |
MS.gene065756.t1 | MTR_1g027200 | 36.190 | 105 | 65 | 1 | 114 | 218 | 171 | 273 | 4.52e-12 | 67.4 |
MS.gene065756.t1 | MTR_1g031560 | 44.615 | 130 | 68 | 1 | 204 | 329 | 490 | 619 | 2.32e-24 | 104 |
MS.gene065756.t1 | MTR_1g031560 | 44.118 | 68 | 38 | 0 | 153 | 220 | 310 | 377 | 8.76e-11 | 63.5 |
MS.gene065756.t1 | MTR_1g028220 | 43.846 | 130 | 61 | 5 | 208 | 329 | 420 | 545 | 5.20e-24 | 103 |
MS.gene065756.t1 | MTR_1g028220 | 35.238 | 105 | 64 | 1 | 116 | 220 | 203 | 303 | 1.61e-11 | 65.9 |
MS.gene065756.t1 | MTR_7g060570 | 39.007 | 141 | 81 | 4 | 195 | 333 | 489 | 626 | 1.29e-23 | 102 |
MS.gene065756.t1 | MTR_4g073220 | 37.500 | 160 | 83 | 6 | 176 | 329 | 448 | 596 | 2.28e-23 | 101 |
MS.gene065756.t1 | MTR_6g082930 | 50.926 | 108 | 50 | 1 | 116 | 220 | 58 | 165 | 4.84e-23 | 98.6 |
MS.gene065756.t1 | MTR_2g036490 | 40.336 | 119 | 64 | 4 | 215 | 330 | 303 | 417 | 1.55e-20 | 92.4 |
MS.gene065756.t1 | MTR_2g036460 | 39.496 | 119 | 65 | 4 | 215 | 330 | 313 | 427 | 5.66e-19 | 88.2 |
MS.gene065756.t1 | MTR_2g036500 | 42.609 | 115 | 57 | 4 | 215 | 326 | 244 | 352 | 1.87e-18 | 86.3 |
MS.gene065756.t1 | MTR_2g036440 | 43.478 | 115 | 56 | 4 | 215 | 326 | 245 | 353 | 2.07e-18 | 85.9 |
MS.gene065756.t1 | MTR_3g107070 | 43.651 | 126 | 53 | 6 | 215 | 333 | 642 | 756 | 1.94e-17 | 84.0 |
MS.gene065756.t1 | MTR_1g031470 | 43.023 | 86 | 49 | 0 | 246 | 331 | 4 | 89 | 6.47e-17 | 76.3 |
MS.gene065756.t1 | MTR_2g036430 | 40.909 | 110 | 53 | 4 | 215 | 318 | 228 | 331 | 9.58e-17 | 80.9 |
MS.gene065756.t1 | MTR_2g080100 | 39.744 | 156 | 73 | 8 | 197 | 342 | 599 | 743 | 1.15e-16 | 81.6 |
MS.gene065756.t1 | MTR_6g043510 | 38.158 | 152 | 74 | 8 | 196 | 334 | 636 | 780 | 1.32e-16 | 81.6 |
MS.gene065756.t1 | MTR_4g114250 | 33.835 | 133 | 86 | 2 | 197 | 329 | 677 | 807 | 1.02e-15 | 78.6 |
MS.gene065756.t1 | MTR_2g073250 | 39.161 | 143 | 71 | 7 | 195 | 328 | 632 | 767 | 1.14e-15 | 78.6 |
MS.gene065756.t1 | MTR_6g043790 | 37.063 | 143 | 72 | 7 | 196 | 327 | 641 | 776 | 3.28e-15 | 77.4 |
MS.gene065756.t1 | MTR_2g080080 | 41.803 | 122 | 55 | 7 | 215 | 328 | 650 | 763 | 3.83e-15 | 77.0 |
MS.gene065756.t1 | MTR_4g114240 | 38.655 | 119 | 66 | 5 | 215 | 329 | 707 | 822 | 4.52e-15 | 76.6 |
MS.gene065756.t1 | MTR_2g054870 | 35.507 | 138 | 76 | 4 | 200 | 326 | 263 | 398 | 6.65e-15 | 75.9 |
MS.gene065756.t1 | MTR_1g012550 | 35.583 | 163 | 92 | 7 | 176 | 333 | 634 | 788 | 8.31e-15 | 75.9 |
MS.gene065756.t1 | MTR_4g114270 | 34.815 | 135 | 82 | 4 | 197 | 329 | 675 | 805 | 1.76e-14 | 75.1 |
MS.gene065756.t1 | MTR_1g031400 | 52.308 | 65 | 27 | 1 | 208 | 268 | 179 | 243 | 1.95e-14 | 72.8 |
MS.gene065756.t1 | MTR_4g113710 | 34.513 | 113 | 63 | 3 | 225 | 327 | 285 | 396 | 4.09e-14 | 73.2 |
MS.gene065756.t1 | MTR_1g099400 | 34.351 | 131 | 78 | 6 | 204 | 329 | 680 | 807 | 4.29e-14 | 73.9 |
MS.gene065756.t1 | MTR_8g030500 | 37.500 | 120 | 58 | 4 | 226 | 331 | 661 | 777 | 8.40e-14 | 72.8 |
MS.gene065756.t1 | MTR_4g114280 | 38.843 | 121 | 67 | 5 | 211 | 327 | 717 | 834 | 1.11e-13 | 72.4 |
MS.gene065756.t1 | MTR_1g032930 | 31.034 | 116 | 69 | 3 | 226 | 331 | 676 | 790 | 1.12e-13 | 72.4 |
MS.gene065756.t1 | MTR_1g027920 | 46.667 | 60 | 32 | 0 | 272 | 331 | 32 | 91 | 1.32e-13 | 66.6 |
MS.gene065756.t1 | MTR_2g067970 | 31.496 | 127 | 82 | 3 | 208 | 331 | 766 | 890 | 1.48e-13 | 72.4 |
MS.gene065756.t1 | MTR_6g034470 | 64.706 | 51 | 17 | 1 | 74 | 123 | 1080 | 1130 | 2.24e-13 | 71.6 |
MS.gene065756.t1 | MTR_2g036480 | 33.088 | 136 | 82 | 3 | 198 | 326 | 240 | 373 | 2.49e-13 | 70.9 |
MS.gene065756.t1 | MTR_5g029400 | 78.049 | 41 | 8 | 1 | 82 | 121 | 34 | 74 | 1.06e-12 | 64.7 |
MS.gene065756.t1 | MTR_1g031220 | 59.259 | 54 | 18 | 1 | 198 | 247 | 19 | 72 | 1.44e-12 | 63.5 |
MS.gene065756.t1 | MTR_2g067990 | 30.709 | 127 | 83 | 3 | 208 | 331 | 878 | 1002 | 2.44e-12 | 68.6 |
MS.gene065756.t1 | MTR_8g028065 | 33.083 | 133 | 73 | 5 | 223 | 344 | 747 | 874 | 3.26e-12 | 68.2 |
MS.gene065756.t1 | MTR_8g011370 | 31.967 | 122 | 77 | 4 | 212 | 329 | 687 | 806 | 3.61e-12 | 67.8 |
MS.gene065756.t1 | MTR_2g103810 | 36.364 | 132 | 75 | 6 | 215 | 342 | 662 | 788 | 1.04e-11 | 66.6 |
MS.gene065756.t1 | MTR_5g013070 | 31.159 | 138 | 89 | 4 | 197 | 330 | 662 | 797 | 2.51e-11 | 65.5 |
MS.gene065756.t1 | MTR_1g031450 | 39.175 | 97 | 56 | 2 | 124 | 220 | 275 | 368 | 3.00e-11 | 64.7 |
MS.gene065756.t1 | MTR_2g011190 | 35.772 | 123 | 68 | 3 | 224 | 340 | 700 | 817 | 4.02e-11 | 64.7 |
MS.gene065756.t1 | MTR_2g011210 | 34.167 | 120 | 68 | 2 | 224 | 337 | 704 | 818 | 5.27e-11 | 64.3 |
MS.gene065756.t1 | MTR_4g040480 | 31.405 | 121 | 81 | 1 | 224 | 342 | 689 | 809 | 6.22e-11 | 63.9 |
MS.gene065756.t1 | MTR_1g104555 | 27.500 | 160 | 102 | 5 | 176 | 327 | 517 | 670 | 7.45e-11 | 63.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene065756.t1 | AT1G66980 | 52.593 | 135 | 58 | 3 | 215 | 343 | 956 | 1090 | 2.72e-38 | 145 |
MS.gene065756.t1 | AT1G66980 | 52.593 | 135 | 58 | 3 | 215 | 343 | 1002 | 1136 | 2.73e-38 | 145 |
MS.gene065756.t1 | AT1G66980 | 52.593 | 135 | 58 | 3 | 215 | 343 | 973 | 1107 | 2.73e-38 | 145 |
MS.gene065756.t1 | AT1G66980 | 52.593 | 135 | 58 | 3 | 215 | 343 | 1000 | 1134 | 2.91e-38 | 145 |
MS.gene065756.t1 | AT1G70250 | 53.383 | 133 | 51 | 5 | 215 | 339 | 628 | 757 | 1.37e-36 | 140 |
MS.gene065756.t1 | AT5G38280 | 47.328 | 131 | 65 | 2 | 215 | 341 | 500 | 630 | 1.76e-35 | 137 |
MS.gene065756.t1 | AT5G38280 | 45.122 | 82 | 37 | 3 | 142 | 221 | 300 | 375 | 7.48e-11 | 63.9 |
MS.gene065756.t1 | AT5G38280 | 47.328 | 131 | 65 | 2 | 215 | 341 | 500 | 630 | 2.03e-35 | 136 |
MS.gene065756.t1 | AT5G38280 | 45.122 | 82 | 37 | 3 | 142 | 221 | 300 | 375 | 8.60e-11 | 63.5 |
MS.gene065756.t1 | AT4G18250 | 52.000 | 125 | 53 | 4 | 215 | 332 | 525 | 649 | 2.23e-34 | 134 |
MS.gene065756.t1 | AT5G39030 | 48.507 | 134 | 61 | 3 | 215 | 342 | 666 | 797 | 3.56e-34 | 133 |
MS.gene065756.t1 | AT5G38240 | 49.612 | 129 | 57 | 3 | 215 | 337 | 433 | 559 | 4.09e-34 | 132 |
MS.gene065756.t1 | AT5G39030 | 47.727 | 132 | 65 | 2 | 215 | 342 | 660 | 791 | 4.23e-34 | 133 |
MS.gene065756.t1 | AT5G38240 | 49.612 | 129 | 57 | 3 | 215 | 337 | 497 | 623 | 5.05e-34 | 132 |
MS.gene065756.t1 | AT5G38240 | 49.612 | 129 | 57 | 3 | 215 | 337 | 479 | 605 | 5.09e-34 | 132 |
MS.gene065756.t1 | AT5G38250 | 52.344 | 128 | 55 | 4 | 215 | 337 | 476 | 602 | 6.05e-34 | 132 |
MS.gene065756.t1 | AT5G38250 | 36.170 | 94 | 54 | 1 | 127 | 220 | 269 | 356 | 6.21e-11 | 63.9 |
MS.gene065756.t1 | AT1G66910 | 48.872 | 133 | 63 | 3 | 215 | 342 | 516 | 648 | 1.54e-33 | 131 |
MS.gene065756.t1 | AT1G66910 | 48.872 | 133 | 63 | 3 | 215 | 342 | 513 | 645 | 1.61e-33 | 131 |
MS.gene065756.t1 | AT1G66920 | 50.413 | 121 | 58 | 1 | 215 | 333 | 450 | 570 | 3.78e-33 | 129 |
MS.gene065756.t1 | AT1G66920 | 50.413 | 121 | 58 | 1 | 215 | 333 | 476 | 596 | 4.13e-33 | 129 |
MS.gene065756.t1 | AT1G66920 | 50.413 | 121 | 58 | 1 | 215 | 333 | 468 | 588 | 4.71e-33 | 129 |
MS.gene065756.t1 | AT5G38260 | 45.513 | 156 | 76 | 5 | 195 | 342 | 466 | 620 | 5.07e-33 | 129 |
MS.gene065756.t1 | AT5G39020 | 47.899 | 119 | 56 | 2 | 215 | 329 | 664 | 780 | 2.73e-32 | 128 |
MS.gene065756.t1 | AT1G66930 | 48.780 | 123 | 57 | 3 | 215 | 331 | 515 | 637 | 2.78e-32 | 127 |
MS.gene065756.t1 | AT1G66930 | 48.780 | 123 | 57 | 3 | 215 | 331 | 484 | 606 | 3.21e-32 | 127 |
MS.gene065756.t1 | AT1G66930 | 48.780 | 123 | 57 | 3 | 215 | 331 | 724 | 846 | 7.93e-32 | 126 |
MS.gene065756.t1 | AT1G67000 | 46.154 | 130 | 57 | 3 | 215 | 331 | 725 | 854 | 8.04e-32 | 126 |
MS.gene065756.t1 | AT5G24080 | 34.351 | 131 | 77 | 5 | 204 | 329 | 688 | 814 | 6.28e-17 | 82.4 |
MS.gene065756.t1 | AT5G24080 | 34.351 | 131 | 77 | 5 | 204 | 329 | 561 | 687 | 7.68e-17 | 82.0 |
MS.gene065756.t1 | AT5G24080 | 34.351 | 131 | 77 | 5 | 204 | 329 | 561 | 687 | 7.68e-17 | 82.0 |
MS.gene065756.t1 | AT4G32300 | 39.855 | 138 | 68 | 6 | 215 | 344 | 662 | 792 | 2.25e-16 | 80.9 |
MS.gene065756.t1 | AT1G34300 | 34.667 | 150 | 80 | 6 | 178 | 318 | 618 | 758 | 4.25e-16 | 80.1 |
MS.gene065756.t1 | AT2G19130 | 36.364 | 110 | 61 | 3 | 226 | 330 | 672 | 777 | 1.16e-13 | 72.4 |
MS.gene065756.t1 | AT4G00340 | 39.048 | 105 | 50 | 3 | 226 | 318 | 638 | 740 | 4.62e-13 | 70.9 |
MS.gene065756.t1 | AT4G00340 | 39.048 | 105 | 50 | 3 | 226 | 318 | 659 | 761 | 4.92e-13 | 70.5 |
MS.gene065756.t1 | AT5G20050 | 40.179 | 112 | 57 | 3 | 225 | 327 | 288 | 398 | 5.20e-12 | 67.0 |
MS.gene065756.t1 | AT2G14510 | 39.048 | 105 | 52 | 4 | 114 | 215 | 504 | 599 | 8.01e-12 | 67.0 |
MS.gene065756.t1 | AT2G14510 | 39.048 | 105 | 52 | 4 | 114 | 215 | 512 | 607 | 8.48e-12 | 67.0 |
MS.gene065756.t1 | AT2G14440 | 39.048 | 105 | 52 | 4 | 114 | 215 | 505 | 600 | 1.01e-11 | 66.6 |
MS.gene065756.t1 | AT4G11460 | 35.780 | 109 | 67 | 2 | 224 | 329 | 526 | 634 | 2.22e-11 | 65.5 |
MS.gene065756.t1 | AT4G11460 | 35.780 | 109 | 67 | 2 | 224 | 329 | 523 | 631 | 2.35e-11 | 65.5 |
MS.gene065756.t1 | AT4G11460 | 35.780 | 109 | 67 | 2 | 224 | 329 | 448 | 556 | 2.49e-11 | 65.1 |
MS.gene065756.t1 | AT4G23320 | 34.862 | 109 | 68 | 1 | 224 | 329 | 360 | 468 | 4.29e-11 | 64.3 |
MS.gene065756.t1 | AT4G23320 | 34.862 | 109 | 68 | 1 | 224 | 329 | 360 | 468 | 4.29e-11 | 64.3 |
MS.gene065756.t1 | AT4G23320 | 34.862 | 109 | 68 | 1 | 224 | 329 | 381 | 489 | 5.09e-11 | 64.3 |
MS.gene065756.t1 | AT1G56130 | 34.188 | 117 | 72 | 3 | 215 | 329 | 663 | 776 | 8.62e-11 | 63.9 |
MS.gene065756.t1 | AT1G56130 | 34.188 | 117 | 72 | 3 | 215 | 329 | 714 | 827 | 8.78e-11 | 63.9 |
MS.gene065756.t1 | AT1G56130 | 34.188 | 117 | 72 | 3 | 215 | 329 | 862 | 975 | 9.67e-11 | 63.5 |
Find 81 sgRNAs with CRISPR-Local
Find 245 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TAATTGTTTCCTTAGGATTT+TGG | 0.154299 | 6.2:-82270626 | None:intergenic |
TTTCACGAAATTGATGATTT+TGG | 0.192196 | 6.2:-82271773 | None:intergenic |
TGCGGAATTACCTGCGGATT+TGG | 0.225214 | 6.2:-82270724 | None:intergenic |
GACAACGTTTCCTGCGGATT+TGG | 0.278255 | 6.2:+82268485 | MS.gene065756:CDS |
AAATCTGATGTTTATAGTTA+TGG | 0.314925 | 6.2:+82271443 | MS.gene065756:CDS |
TCATTAAATCTACTCATTGC+AGG | 0.324422 | 6.2:-82271677 | None:intergenic |
CTCATTGCAGGTCTATCATT+TGG | 0.325817 | 6.2:-82271665 | None:intergenic |
AGCCATGTTGCCAGATGAAA+TGG | 0.356502 | 6.2:+82269741 | MS.gene065756:intron |
GCGGAATTACCTGCGGATTT+GGG | 0.362096 | 6.2:-82270723 | None:intergenic |
GAATGACCATAGTAGGATTA+TGG | 0.362649 | 6.2:+82271627 | MS.gene065756:CDS |
GTGAGAAATACTTTCCTGAT+TGG | 0.366334 | 6.2:+82271528 | MS.gene065756:CDS |
TTGCCAAGGCCCATTTCATC+TGG | 0.382428 | 6.2:-82269751 | None:intergenic |
AGTGCAGGTGCAACATTTGT+AGG | 0.383068 | 6.2:+82271028 | MS.gene065756:CDS |
GGGAGAAGAAAGAATAGGTT+TGG | 0.383588 | 6.2:-82271738 | None:intergenic |
TCGTGGGTAATTGTTTCCTT+AGG | 0.386997 | 6.2:-82270633 | None:intergenic |
TGGCAAAATCCGCAGGAAAC+AGG | 0.387702 | 6.2:+82270682 | MS.gene065756:CDS |
AGAAGGCAATATGAATTCAT+TGG | 0.389332 | 6.2:+82271706 | MS.gene065756:CDS |
ATCTGTCATTCTTTAGCAGC+AGG | 0.410743 | 6.2:-82269888 | None:intergenic |
GGTTATGGTACGGTATATAA+AGG | 0.411600 | 6.2:+82271235 | MS.gene065756:CDS |
GGGCCTTGGCAAAACAGTTC+AGG | 0.413248 | 6.2:+82269762 | MS.gene065756:CDS |
AAACTAGGACAAGGTGGTTA+TGG | 0.416519 | 6.2:+82271220 | MS.gene065756:CDS |
AGATTTAATGAAATGTTAGA+AGG | 0.419821 | 6.2:+82271689 | MS.gene065756:CDS |
TGAGAAATACTTTCCTGATT+GGG | 0.423702 | 6.2:+82271529 | MS.gene065756:CDS |
TAGTTTGACTTCGAAGTTGT+TGG | 0.428854 | 6.2:-82271203 | None:intergenic |
TGCCAAGGATTTAGGTTCCC+AGG | 0.442474 | 6.2:-82270664 | None:intergenic |
ATGATGTTGTTGGAAATGAT+TGG | 0.443561 | 6.2:+82271467 | MS.gene065756:CDS |
TTAAGAATGCTTCGATGTCT+TGG | 0.450478 | 6.2:-82271123 | None:intergenic |
GCAAAGAGAATGACCATAGT+AGG | 0.455735 | 6.2:+82271620 | MS.gene065756:CDS |
TTCCTGATTGGGTATACAAA+AGG | 0.458665 | 6.2:+82271540 | MS.gene065756:CDS |
TAGTTATGGAATGATGTTGT+TGG | 0.462211 | 6.2:+82271457 | MS.gene065756:CDS |
AATGCACCATAATCCTACTA+TGG | 0.476373 | 6.2:-82271633 | None:intergenic |
GGATGCATTCAATATCTTCA+CGG | 0.476442 | 6.2:-82271284 | None:intergenic |
CTCACTTGTATGACTTGCAT+TGG | 0.490693 | 6.2:-82271510 | None:intergenic |
CTGCGGTTTCCAAAATCCTA+AGG | 0.490778 | 6.2:+82270617 | MS.gene065756:CDS |
TTCTCCTACTATCGCAGGTA+AGG | 0.491144 | 6.2:+82268195 | MS.gene065756:CDS |
TTGAATGCATCCAAAGGAAA+AGG | 0.493184 | 6.2:+82271295 | MS.gene065756:CDS |
GATTTGGGTGAAATTTCTGC+AGG | 0.508856 | 6.2:-82270708 | None:intergenic |
TTGCCAGATGAAATGGGCCT+TGG | 0.512607 | 6.2:+82269748 | MS.gene065756:CDS |
TACCTGGGAACCTAAATCCT+TGG | 0.519615 | 6.2:+82270662 | MS.gene065756:CDS |
GGAGAAGAAAGAATAGGTTT+GGG | 0.520827 | 6.2:-82271737 | None:intergenic |
AACTCCTTACCTGCGATAGT+AGG | 0.522501 | 6.2:-82268199 | None:intergenic |
GAGTTGTGGAATAGAAACTT+TGG | 0.533531 | 6.2:+82271407 | MS.gene065756:CDS |
CTAGTGGGAGAAGAAAGAAT+AGG | 0.536965 | 6.2:-82271743 | None:intergenic |
AAATCCTCAGATAAATCCTC+AGG | 0.539118 | 6.2:-82268453 | None:intergenic |
GTTCCCAGGTATAACCTTCG+TGG | 0.548656 | 6.2:-82270650 | None:intergenic |
CTTGCGGTTACCAAATCCGC+AGG | 0.558797 | 6.2:-82268495 | None:intergenic |
AAATCCTTGGCAAAATCCGC+AGG | 0.560113 | 6.2:+82270675 | MS.gene065756:CDS |
GCCCATTTCATCTGGCAACA+TGG | 0.565590 | 6.2:-82269743 | None:intergenic |
AGGAAAATGAAAATTATCGC+AGG | 0.566782 | 6.2:+82268232 | MS.gene065756:CDS |
ATAATCATAACAGGAAGTGC+AGG | 0.568763 | 6.2:+82271013 | MS.gene065756:intron |
ATGATTTCTCCTACTATCGC+AGG | 0.572648 | 6.2:+82268190 | MS.gene065756:CDS |
AACAACTTCGAAGTCAAACT+AGG | 0.574025 | 6.2:+82271205 | MS.gene065756:CDS |
AAGTTTCTATTCCACAACTC+AGG | 0.577032 | 6.2:-82271404 | None:intergenic |
TGCAGGAAACCTGTTTCCTG+CGG | 0.579526 | 6.2:-82270691 | None:intergenic |
CTTTGCGATATCATCTTCTG+TGG | 0.580639 | 6.2:-82271603 | None:intergenic |
GCCATGTTGCCAGATGAAAT+GGG | 0.585539 | 6.2:+82269742 | MS.gene065756:intron |
GAAATTTCACCCAAATCCGC+AGG | 0.590400 | 6.2:+82270714 | MS.gene065756:CDS |
TTACCCACGAAGGTTATACC+TGG | 0.591242 | 6.2:+82270646 | MS.gene065756:CDS |
TCGCAGGTAAGGAGTTGAGC+TGG | 0.594259 | 6.2:+82268206 | MS.gene065756:CDS |
GTTACCTGCGGATATTCTTG+CGG | 0.600606 | 6.2:-82268511 | None:intergenic |
TACACTGACAACGTTTCCTG+CGG | 0.606801 | 6.2:+82268479 | MS.gene065756:CDS |
AAGATATTGAATGCATCCAA+AGG | 0.610574 | 6.2:+82271289 | MS.gene065756:CDS |
GAAGAAAGAATAGGTTTGGG+TGG | 0.618415 | 6.2:-82271734 | None:intergenic |
GATATGTAGCTCCTGAGTTG+TGG | 0.623997 | 6.2:+82271393 | MS.gene065756:intron |
TGTTGGAAATGATTGGAGGA+AGG | 0.624228 | 6.2:+82271474 | MS.gene065756:CDS |
TTCCCAGGTATAACCTTCGT+GGG | 0.624399 | 6.2:-82270649 | None:intergenic |
GTAAGGAGTTGAGCTGGCAA+AGG | 0.625138 | 6.2:+82268212 | MS.gene065756:CDS |
ATGTTGTTGGAAATGATTGG+AGG | 0.628419 | 6.2:+82271470 | MS.gene065756:CDS |
TCAATATCTTCACGGCCACA+AGG | 0.629375 | 6.2:-82271276 | None:intergenic |
AATACCTGAGGATTTATCTG+AGG | 0.631932 | 6.2:+82268449 | MS.gene065756:CDS |
TTGTGGAATAGAAACTTTGG+AGG | 0.634428 | 6.2:+82271410 | MS.gene065756:CDS |
AGGACAAGGTGGTTATGGTA+CGG | 0.637918 | 6.2:+82271225 | MS.gene065756:CDS |
GCTACTCAATGACCGCCTTG+TGG | 0.638427 | 6.2:+82271261 | MS.gene065756:CDS |
TACCCACGAAGGTTATACCT+GGG | 0.677998 | 6.2:+82270647 | MS.gene065756:CDS |
GTAACCGCAAGAATATCCGC+AGG | 0.678182 | 6.2:+82268507 | MS.gene065756:CDS |
ATCCGTAGGAAAGTTTCCTG+CGG | 0.689027 | 6.2:+82270600 | MS.gene065756:intron |
TTCGAAGTCAAACTAGGACA+AGG | 0.695808 | 6.2:+82271211 | MS.gene065756:CDS |
ATAATCCGCAGGAATACCTG+AGG | 0.697818 | 6.2:+82268437 | MS.gene065756:intron |
AAGGAAACAATTACCCACGA+AGG | 0.704141 | 6.2:+82270636 | MS.gene065756:CDS |
GAAGTCAAACTAGGACAAGG+TGG | 0.726761 | 6.2:+82271214 | MS.gene065756:CDS |
ATATCTTCACGGCCACAAGG+CGG | 0.777017 | 6.2:-82271273 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AATTTTTTCATGAAATATTT+TGG | + | chr6.2:82268616-82268635 | MS.gene065756:intron | 10.0% |
!!! | ATTTTTTCATGAAATATTTT+GGG | + | chr6.2:82268617-82268636 | MS.gene065756:intron | 10.0% |
!! | AGAATGAATATATCAATATT+AGG | + | chr6.2:82269359-82269378 | MS.gene065756:intron | 15.0% |
!!! | AATTGATTTTGTATATCATT+TGG | + | chr6.2:82269012-82269031 | MS.gene065756:intron | 15.0% |
!!! | ATTGATTTTGTATATCATTT+GGG | + | chr6.2:82269013-82269032 | MS.gene065756:intron | 15.0% |
!! | AAATCTGATGTTTATAGTTA+TGG | + | chr6.2:82271443-82271462 | MS.gene065756:CDS | 20.0% |
!! | ACGAAATCAAAACAAATTAA+TGG | - | chr6.2:82269225-82269244 | None:intergenic | 20.0% |
!! | ACTGGAATATATCAATATTA+GGG | + | chr6.2:82269476-82269495 | MS.gene065756:intron | 20.0% |
!! | AGATTTAATGAAATGTTAGA+AGG | + | chr6.2:82271689-82271708 | MS.gene065756:CDS | 20.0% |
!! | TAAAAATTTACTAAATCCAC+AGG | - | chr6.2:82268597-82268616 | None:intergenic | 20.0% |
!! | TAAATCATGTTCACTATATA+AGG | - | chr6.2:82268663-82268682 | None:intergenic | 20.0% |
!! | TAATATTGAAGTTCAAGAAA+CGG | + | chr6.2:82269512-82269531 | MS.gene065756:intron | 20.0% |
!! | TTAGCATTATATATGTACTA+GGG | + | chr6.2:82270871-82270890 | MS.gene065756:intron | 20.0% |
!! | TTCTTATCAAAAATAGCTTT+AGG | + | chr6.2:82270001-82270020 | MS.gene065756:intron | 20.0% |
!!! | AATGTACGATATTTGTTAAA+TGG | - | chr6.2:82269418-82269437 | None:intergenic | 20.0% |
!!! | TAAGATATGTCATATGTTTT+TGG | + | chr6.2:82269845-82269864 | MS.gene065756:intron | 20.0% |
!!! | TGAAATTTTAGTGTTTTTGA+AGG | + | chr6.2:82270224-82270243 | MS.gene065756:intron | 20.0% |
! | AAATAGTTTGACGTTGAATT+TGG | - | chr6.2:82268689-82268708 | None:intergenic | 25.0% |
! | AAATTAGTGCCAACTAATAT+AGG | - | chr6.2:82270825-82270844 | None:intergenic | 25.0% |
! | AACTAATATAGGCAAAAGTT+AGG | - | chr6.2:82270814-82270833 | None:intergenic | 25.0% |
! | AATCCTTTCATAATCATAAC+AGG | + | chr6.2:82271004-82271023 | MS.gene065756:intron | 25.0% |
! | ACTAATATAGGCAAAAGTTA+GGG | - | chr6.2:82270813-82270832 | None:intergenic | 25.0% |
! | AGTTTGATTACATAGAGTTA+TGG | + | chr6.2:82270928-82270947 | MS.gene065756:intron | 25.0% |
! | CTACTGTAAAGTCAATTAAA+AGG | + | chr6.2:82270339-82270358 | MS.gene065756:intron | 25.0% |
! | CTATGTAATCAAACTTACAT+TGG | - | chr6.2:82270923-82270942 | None:intergenic | 25.0% |
! | GACTGGAATATATCAATATT+AGG | + | chr6.2:82269475-82269494 | MS.gene065756:intron | 25.0% |
! | GTAAAGTTTATGCAAGTTAA+AGG | - | chr6.2:82269088-82269107 | None:intergenic | 25.0% |
! | GTTAGCATTATATATGTACT+AGG | + | chr6.2:82270870-82270889 | MS.gene065756:intron | 25.0% |
! | TATATTAGTTGGCACTAATT+TGG | + | chr6.2:82270824-82270843 | MS.gene065756:intron | 25.0% |
! | TTAGATTTATTAACAGTCCA+TGG | - | chr6.2:82269316-82269335 | None:intergenic | 25.0% |
!! | ACCATTATCTTTTCTTACAT+TGG | + | chr6.2:82268347-82268366 | MS.gene065756:intron | 25.0% |
!! | TAACTTTTGCCTATATTAGT+TGG | + | chr6.2:82270813-82270832 | MS.gene065756:intron | 25.0% |
!! | TAATTGTTTCCTTAGGATTT+TGG | - | chr6.2:82270629-82270648 | None:intergenic | 25.0% |
!! | TCACTGGAATATTTTATGAT+AGG | + | chr6.2:82270152-82270171 | MS.gene065756:intron | 25.0% |
!! | TTGTCTCATTAACTATTTTG+TGG | + | chr6.2:82268280-82268299 | MS.gene065756:intron | 25.0% |
!!! | AAATATTCCAGTGATTTGTT+TGG | - | chr6.2:82270146-82270165 | None:intergenic | 25.0% |
!!! | CTTTTAATTGACTTTACAGT+AGG | - | chr6.2:82270341-82270360 | None:intergenic | 25.0% |
!!! | TGTCATATGTTTTTGGTTTT+AGG | + | chr6.2:82269852-82269871 | MS.gene065756:intron | 25.0% |
!!! | TTATCAAAAATAGCTTTAGG+TGG | + | chr6.2:82270004-82270023 | MS.gene065756:intron | 25.0% |
AAATATAAATCCGTTTCCTG+CGG | + | chr6.2:82270430-82270449 | MS.gene065756:intron | 30.0% | |
AAGATATTGAATGCATCCAA+AGG | + | chr6.2:82271289-82271308 | MS.gene065756:CDS | 30.0% | |
AGAAGGCAATATGAATTCAT+TGG | + | chr6.2:82271706-82271725 | MS.gene065756:CDS | 30.0% | |
AGGAAAATGAAAATTATCGC+AGG | + | chr6.2:82268232-82268251 | MS.gene065756:CDS | 30.0% | |
ATGATGTTGTTGGAAATGAT+TGG | + | chr6.2:82271467-82271486 | MS.gene065756:CDS | 30.0% | |
ATGTATAACTTAGTGTTGTG+TGG | + | chr6.2:82270107-82270126 | MS.gene065756:intron | 30.0% | |
CTTCCTGTTATGATTATGAA+AGG | - | chr6.2:82271010-82271029 | None:intergenic | 30.0% | |
GCCAATGTAAGAAAAGATAA+TGG | - | chr6.2:82268351-82268370 | None:intergenic | 30.0% | |
TAAAGGAAATTGTAGCTTCA+AGG | - | chr6.2:82268821-82268840 | None:intergenic | 30.0% | |
TACAACCTTGTCATAATCAT+AGG | - | chr6.2:82270255-82270274 | None:intergenic | 30.0% | |
TAGGACAAATCAAAGTCTAT+GGG | - | chr6.2:82270307-82270326 | None:intergenic | 30.0% | |
TAGTTATGGAATGATGTTGT+TGG | + | chr6.2:82271457-82271476 | MS.gene065756:CDS | 30.0% | |
TCAAAAGTTATAGTTACCTG+CGG | - | chr6.2:82268526-82268545 | None:intergenic | 30.0% | |
TCATTAAATCTACTCATTGC+AGG | - | chr6.2:82271680-82271699 | None:intergenic | 30.0% | |
TGAGAAATACTTTCCTGATT+GGG | + | chr6.2:82271529-82271548 | MS.gene065756:CDS | 30.0% | |
TGTTCCAGAAAACATACAAA+CGG | + | chr6.2:82270521-82270540 | MS.gene065756:intron | 30.0% | |
TTGTGCTTTAGTGTTTACTA+TGG | + | chr6.2:82269674-82269693 | MS.gene065756:intron | 30.0% | |
! | AAATTCTTCACCTTTTCCTT+TGG | - | chr6.2:82271308-82271327 | None:intergenic | 30.0% |
! | ACAGTAGGATTTTATCAACT+AGG | - | chr6.2:82270326-82270345 | None:intergenic | 30.0% |
! | GGTAACTATAACTTTTGATG+CGG | + | chr6.2:82268528-82268547 | MS.gene065756:intron | 30.0% |
!! | ACATGTAGATCATTTTGAAG+AGG | - | chr6.2:82270087-82270106 | None:intergenic | 30.0% |
!! | TAGTTGTAGACTTGATAATG+TGG | - | chr6.2:82269039-82269058 | None:intergenic | 30.0% |
!!! | GTATGTTTTCTGGAACATAT+CGG | - | chr6.2:82270518-82270537 | None:intergenic | 30.0% |
AAACCTCTCATGTTAATGTC+CGG | + | chr6.2:82271353-82271372 | MS.gene065756:intron | 35.0% | |
AAATCCTCAGATAAATCCTC+AGG | - | chr6.2:82268456-82268475 | None:intergenic | 35.0% | |
AACAACTTCGAAGTCAAACT+AGG | + | chr6.2:82271205-82271224 | MS.gene065756:CDS | 35.0% | |
AAGTTTCTATTCCACAACTC+AGG | - | chr6.2:82271407-82271426 | None:intergenic | 35.0% | |
AATACCTGAGGATTTATCTG+AGG | + | chr6.2:82268449-82268468 | MS.gene065756:CDS | 35.0% | |
AATGCACCATAATCCTACTA+TGG | - | chr6.2:82271636-82271655 | None:intergenic | 35.0% | |
AGAAACTGTCGAATTTACTG+CGG | + | chr6.2:82268399-82268418 | MS.gene065756:intron | 35.0% | |
AGCAAATTGAACCTGAGATT+TGG | - | chr6.2:82269194-82269213 | None:intergenic | 35.0% | |
AGGGTTTCATGAATGAACTA+CGG | - | chr6.2:82270794-82270813 | None:intergenic | 35.0% | |
AGGTGAAGAATTTATGAACG+AGG | + | chr6.2:82271315-82271334 | MS.gene065756:intron | 35.0% | |
ATGCAAGTTAAAGGAACTCA+CGG | - | chr6.2:82269079-82269098 | None:intergenic | 35.0% | |
ATGTTGTTGGAAATGATTGG+AGG | + | chr6.2:82271470-82271489 | MS.gene065756:CDS | 35.0% | |
CAAGTTACCAAACAAATCAC+TGG | + | chr6.2:82270136-82270155 | MS.gene065756:intron | 35.0% | |
CTAGGACAAATCAAAGTCTA+TGG | - | chr6.2:82270308-82270327 | None:intergenic | 35.0% | |
CTTCTATTATGCCAAATCTC+AGG | + | chr6.2:82269180-82269199 | MS.gene065756:intron | 35.0% | |
GAATGACCATAGTAGGATTA+TGG | + | chr6.2:82271627-82271646 | MS.gene065756:CDS | 35.0% | |
GAGTTGTGGAATAGAAACTT+TGG | + | chr6.2:82271407-82271426 | MS.gene065756:CDS | 35.0% | |
GGAGAAGAAAGAATAGGTTT+GGG | - | chr6.2:82271740-82271759 | None:intergenic | 35.0% | |
GGATGCATTCAATATCTTCA+CGG | - | chr6.2:82271287-82271306 | None:intergenic | 35.0% | |
GGTTATGGTACGGTATATAA+AGG | + | chr6.2:82271235-82271254 | MS.gene065756:CDS | 35.0% | |
GTAATCAAACTTACATTGGC+AGG | - | chr6.2:82270919-82270938 | None:intergenic | 35.0% | |
GTGAGAAATACTTTCCTGAT+TGG | + | chr6.2:82271528-82271547 | MS.gene065756:CDS | 35.0% | |
GTTCCAGAAAACATACAAAC+GGG | + | chr6.2:82270522-82270541 | MS.gene065756:intron | 35.0% | |
TCCAAACGTTCTTTGTTCAT+CGG | + | chr6.2:82268746-82268765 | MS.gene065756:intron | 35.0% | |
TCTAGTAGTGCTTGTACTTT+AGG | - | chr6.2:82268382-82268401 | None:intergenic | 35.0% | |
TGAACAAAGAACGTTTGGAT+CGG | - | chr6.2:82268745-82268764 | None:intergenic | 35.0% | |
TTAAGAATGCTTCGATGTCT+TGG | - | chr6.2:82271126-82271145 | None:intergenic | 35.0% | |
TTCCTGATTGGGTATACAAA+AGG | + | chr6.2:82271540-82271559 | MS.gene065756:CDS | 35.0% | |
TTGAATGCATCCAAAGGAAA+AGG | + | chr6.2:82271295-82271314 | MS.gene065756:CDS | 35.0% | |
TTGCGAGGAATTTGTATACT+TGG | + | chr6.2:82269156-82269175 | MS.gene065756:intron | 35.0% | |
TTGTGCCTATGATTATGACA+AGG | + | chr6.2:82270247-82270266 | MS.gene065756:intron | 35.0% | |
TTGTGGAATAGAAACTTTGG+AGG | + | chr6.2:82271410-82271429 | MS.gene065756:CDS | 35.0% | |
TTTCCTTGGAAAATATCCGT+AGG | + | chr6.2:82270586-82270605 | MS.gene065756:intron | 35.0% | |
TTTGAATCTGTAAGCCACTA+AGG | + | chr6.2:82270178-82270197 | MS.gene065756:intron | 35.0% | |
! | AACCTTTTGTATACCCAATC+AGG | - | chr6.2:82271545-82271564 | None:intergenic | 35.0% |
! | AGAAACTCTCTATTTTCCTG+CGG | - | chr6.2:82270745-82270764 | None:intergenic | 35.0% |
! | ATAATCATAACAGGAAGTGC+AGG | + | chr6.2:82271013-82271032 | MS.gene065756:intron | 35.0% |
! | TAGTTTGACTTCGAAGTTGT+TGG | - | chr6.2:82271206-82271225 | None:intergenic | 35.0% |
! | TTGTTAAACCTTTTGTGCCA+TGG | + | chr6.2:82269296-82269315 | MS.gene065756:intron | 35.0% |
! | TTTCCTACGGATATTTTCCA+AGG | - | chr6.2:82270592-82270611 | None:intergenic | 35.0% |
!!! | GATTTTGGTAGTGATCTAGT+GGG | - | chr6.2:82271761-82271780 | None:intergenic | 35.0% |
!!! | GCGATTTTTTTGAAGCTTTG+TGG | + | chr6.2:82269631-82269650 | MS.gene065756:intron | 35.0% |
!!! | TGATTTTGGTAGTGATCTAG+TGG | - | chr6.2:82271762-82271781 | None:intergenic | 35.0% |
AAACTAGGACAAGGTGGTTA+TGG | + | chr6.2:82271220-82271239 | MS.gene065756:CDS | 40.0% | |
AACCAACACATGATGCTTAC+AGG | + | chr6.2:82270057-82270076 | MS.gene065756:intron | 40.0% | |
AAGGAAACAATTACCCACGA+AGG | + | chr6.2:82270636-82270655 | MS.gene065756:CDS | 40.0% | |
AAGTTAAAGGAACTCACGGT+GGG | - | chr6.2:82269075-82269094 | None:intergenic | 40.0% | |
ACCAACACATGATGCTTACA+GGG | + | chr6.2:82270058-82270077 | MS.gene065756:intron | 40.0% | |
AGTGAGTGTATACTCCTTAG+AGG | + | chr6.2:82269926-82269945 | MS.gene065756:intron | 40.0% | |
ATCTGTCATTCTTTAGCAGC+AGG | - | chr6.2:82269891-82269910 | None:intergenic | 40.0% | |
ATGAAACTCTCTTCCCTCTA+AGG | - | chr6.2:82269943-82269962 | None:intergenic | 40.0% | |
ATGATTTCTCCTACTATCGC+AGG | + | chr6.2:82268190-82268209 | MS.gene065756:CDS | 40.0% | |
CAAGAAACGGTTGAGGTAAA+GGG | + | chr6.2:82269525-82269544 | MS.gene065756:intron | 40.0% | |
CTAGTGGGAGAAGAAAGAAT+AGG | - | chr6.2:82271746-82271765 | None:intergenic | 40.0% | |
CTCATTGCAGGTCTATCATT+TGG | - | chr6.2:82271668-82271687 | None:intergenic | 40.0% | |
CTTTGCGATATCATCTTCTG+TGG | - | chr6.2:82271606-82271625 | None:intergenic | 40.0% | |
GAAATTCCGCAGGAAAATTC+GGG | - | chr6.2:82270570-82270589 | None:intergenic | 40.0% | |
GAAATTGTAGCTTCAAGGAG+TGG | - | chr6.2:82268816-82268835 | None:intergenic | 40.0% | |
GAAGAAAGAATAGGTTTGGG+TGG | - | chr6.2:82271737-82271756 | None:intergenic | 40.0% | |
GAGTTTCAACGATGAACGTT+TGG | - | chr6.2:82268723-82268742 | None:intergenic | 40.0% | |
GATTCAGCAAACAACGTTGA+AGG | - | chr6.2:82268907-82268926 | None:intergenic | 40.0% | |
GATTTGGGTGAAATTTCTGC+AGG | - | chr6.2:82270711-82270730 | None:intergenic | 40.0% | |
GCAAAGAGAATGACCATAGT+AGG | + | chr6.2:82271620-82271639 | MS.gene065756:CDS | 40.0% | |
GGAAATTCCGCAGGAAAATT+CGG | - | chr6.2:82270571-82270590 | None:intergenic | 40.0% | |
GGGAGAAGAAAGAATAGGTT+TGG | - | chr6.2:82271741-82271760 | None:intergenic | 40.0% | |
GGTTTGATGAAATGATTGCG+AGG | + | chr6.2:82269141-82269160 | MS.gene065756:intron | 40.0% | |
GTAGAACAGAAAGTGAGAAG+CGG | + | chr6.2:82269448-82269467 | MS.gene065756:intron | 40.0% | |
GTGAGTGTATACTCCTTAGA+GGG | + | chr6.2:82269927-82269946 | MS.gene065756:intron | 40.0% | |
TAAATCCTCAGGTATTCCTG+CGG | - | chr6.2:82268445-82268464 | None:intergenic | 40.0% | |
TCAAGAAACGGTTGAGGTAA+AGG | + | chr6.2:82269524-82269543 | MS.gene065756:intron | 40.0% | |
TCAGATGCGACGAACAATAA+AGG | - | chr6.2:82268838-82268857 | None:intergenic | 40.0% | |
TCGTGGGTAATTGTTTCCTT+AGG | - | chr6.2:82270636-82270655 | None:intergenic | 40.0% | |
TGAAGTTCAAGAAACGGTTG+AGG | + | chr6.2:82269518-82269537 | MS.gene065756:intron | 40.0% | |
TGTTGGAAATGATTGGAGGA+AGG | + | chr6.2:82271474-82271493 | MS.gene065756:CDS | 40.0% | |
TTAACAGTCCATGGCACAAA+AGG | - | chr6.2:82269307-82269326 | None:intergenic | 40.0% | |
TTACACTAACACCACCTTAG+TGG | - | chr6.2:82270195-82270214 | None:intergenic | 40.0% | |
TTAGAGGGAAGAGAGTTTCA+TGG | + | chr6.2:82269942-82269961 | MS.gene065756:intron | 40.0% | |
TTCGAAGTCAAACTAGGACA+AGG | + | chr6.2:82271211-82271230 | MS.gene065756:CDS | 40.0% | |
TTTCATCAAACCTGAGAGTC+AGG | - | chr6.2:82269133-82269152 | None:intergenic | 40.0% | |
! | ATTTTCCAAGGAAATTCCGC+AGG | - | chr6.2:82270580-82270599 | None:intergenic | 40.0% |
! | ATTTTCCTGCGGAATTTCCT+TGG | + | chr6.2:82270572-82270591 | MS.gene065756:intron | 40.0% |
! | CTCACTTGTATGACTTGCAT+TGG | - | chr6.2:82271513-82271532 | None:intergenic | 40.0% |
! | TTCAACGAGTTGAGAAGGTT+TGG | - | chr6.2:82268781-82268800 | None:intergenic | 40.0% |
AAATCCACAGGTAAATCCGC+AGG | - | chr6.2:82268585-82268604 | None:intergenic | 45.0% | |
AAATCCTTGGCAAAATCCGC+AGG | + | chr6.2:82270675-82270694 | MS.gene065756:CDS | 45.0% | |
AACCGCAGGAAACTTTCCTA+CGG | - | chr6.2:82270605-82270624 | None:intergenic | 45.0% | |
AACTCCTTACCTGCGATAGT+AGG | - | chr6.2:82268202-82268221 | None:intergenic | 45.0% | |
AAGTGAGAAGCGGTTATGAC+TGG | + | chr6.2:82269458-82269477 | MS.gene065756:intron | 45.0% | |
AGCCATGTTGCCAGATGAAA+TGG | + | chr6.2:82269741-82269760 | MS.gene065756:intron | 45.0% | |
AGGACAAGGTGGTTATGGTA+CGG | + | chr6.2:82271225-82271244 | MS.gene065756:CDS | 45.0% | |
AGGGAAGAGAGTTTCATGGA+GGG | + | chr6.2:82269946-82269965 | MS.gene065756:intron | 45.0% | |
AGTGCAGGTGCAACATTTGT+AGG | + | chr6.2:82271028-82271047 | MS.gene065756:CDS | 45.0% | |
AGTTAAAGGAACTCACGGTG+GGG | - | chr6.2:82269074-82269093 | None:intergenic | 45.0% | |
ATAATCCGCAGGAATACCTG+AGG | + | chr6.2:82268437-82268456 | MS.gene065756:intron | 45.0% | |
ATCCGTAGGAAAGTTTCCTG+CGG | + | chr6.2:82270600-82270619 | MS.gene065756:intron | 45.0% | |
CAAACTTACATTGGCAGGCA+AGG | - | chr6.2:82270914-82270933 | None:intergenic | 45.0% | |
CAAGTTAAAGGAACTCACGG+TGG | - | chr6.2:82269076-82269095 | None:intergenic | 45.0% | |
CAGAAAACATACAAACGGGC+AGG | + | chr6.2:82270526-82270545 | MS.gene065756:intron | 45.0% | |
CTAGGTAAATCCGCAGGAAA+CGG | - | chr6.2:82270443-82270462 | None:intergenic | 45.0% | |
CTGCGGTTTCCAAAATCCTA+AGG | + | chr6.2:82270617-82270636 | MS.gene065756:CDS | 45.0% | |
GAAATTTCACCCAAATCCGC+AGG | + | chr6.2:82270714-82270733 | MS.gene065756:CDS | 45.0% | |
GAAGTCAAACTAGGACAAGG+TGG | + | chr6.2:82271214-82271233 | MS.gene065756:CDS | 45.0% | |
GAATCTGTAAGCCACTAAGG+TGG | + | chr6.2:82270181-82270200 | MS.gene065756:intron | 45.0% | |
GATATGTAGCTCCTGAGTTG+TGG | + | chr6.2:82271393-82271412 | MS.gene065756:intron | 45.0% | |
GCCATGTTGCCAGATGAAAT+GGG | + | chr6.2:82269742-82269761 | MS.gene065756:intron | 45.0% | |
GCCGATGAACAAAGAACGTT+TGG | - | chr6.2:82268750-82268769 | None:intergenic | 45.0% | |
GCTTTACCTGCGGAAGATTT+CGG | + | chr6.2:82268550-82268569 | MS.gene065756:intron | 45.0% | |
GGAATTGACGAGAACGATGA+AGG | - | chr6.2:82268886-82268905 | None:intergenic | 45.0% | |
GTTACCTGCGGATATTCTTG+CGG | - | chr6.2:82268514-82268533 | None:intergenic | 45.0% | |
GTTTCCTGCGGATTTACCTA+GGG | + | chr6.2:82270442-82270461 | MS.gene065756:intron | 45.0% | |
TACACTGACAACGTTTCCTG+CGG | + | chr6.2:82268479-82268498 | MS.gene065756:CDS | 45.0% | |
TACCCACGAAGGTTATACCT+GGG | + | chr6.2:82270647-82270666 | MS.gene065756:CDS | 45.0% | |
TACCTGGGAACCTAAATCCT+TGG | + | chr6.2:82270662-82270681 | MS.gene065756:CDS | 45.0% | |
TCAATATCTTCACGGCCACA+AGG | - | chr6.2:82271279-82271298 | None:intergenic | 45.0% | |
TCCCTGTAAGCATCATGTGT+TGG | - | chr6.2:82270062-82270081 | None:intergenic | 45.0% | |
TTACCCACGAAGGTTATACC+TGG | + | chr6.2:82270646-82270665 | MS.gene065756:CDS | 45.0% | |
TTCCCAGGTATAACCTTCGT+GGG | - | chr6.2:82270652-82270671 | None:intergenic | 45.0% | |
TTCTCCTACTATCGCAGGTA+AGG | + | chr6.2:82268195-82268214 | MS.gene065756:CDS | 45.0% | |
! | ACACCTGAACTGTTTTGCCA+AGG | - | chr6.2:82269768-82269787 | None:intergenic | 45.0% |
! | ATGTTAATGTCCGGTGCTAG+AGG | + | chr6.2:82271362-82271381 | MS.gene065756:intron | 45.0% |
! | CTGCCCGTTTGTATGTTTTC+TGG | - | chr6.2:82270528-82270547 | None:intergenic | 45.0% |
! | GCGGATTTTGCCAAGGATTT+AGG | - | chr6.2:82270675-82270694 | None:intergenic | 45.0% |
! | TAACTGCCCGAATTTTCCTG+CGG | + | chr6.2:82270561-82270580 | MS.gene065756:intron | 45.0% |
! | TTTTCCTGCGGAATTACCTG+CGG | - | chr6.2:82270733-82270752 | None:intergenic | 45.0% |
! | TTTTGATGCGGCTTTACCTG+CGG | + | chr6.2:82268540-82268559 | MS.gene065756:intron | 45.0% |
!! | CTTAGGATTTTGGAAACCGC+AGG | - | chr6.2:82270619-82270638 | None:intergenic | 45.0% |
!!! | GTTTTCTGGAACATATCGGC+AGG | - | chr6.2:82270514-82270533 | None:intergenic | 45.0% |
AAATCCGCAGGTAATTCCGC+AGG | + | chr6.2:82270726-82270745 | MS.gene065756:intron | 50.0% | |
AACGGCACAGGAAAATCAGC+AGG | - | chr6.2:82270478-82270497 | None:intergenic | 50.0% | |
AGGTAAATCCGCAGGAAGAG+TGG | - | chr6.2:82268577-82268596 | None:intergenic | 50.0% | |
ATATCTTCACGGCCACAAGG+CGG | - | chr6.2:82271276-82271295 | None:intergenic | 50.0% | |
ATTTCGGACCACTCTTCCTG+CGG | + | chr6.2:82268566-82268585 | MS.gene065756:intron | 50.0% | |
CGGATTTACCTAGGGAACAC+TGG | + | chr6.2:82270450-82270469 | MS.gene065756:intron | 50.0% | |
CGTTTCCTGCGGATTTACCT+AGG | + | chr6.2:82270441-82270460 | MS.gene065756:intron | 50.0% | |
GACAACGTTTCCTGCGGATT+TGG | + | chr6.2:82268485-82268504 | MS.gene065756:CDS | 50.0% | |
GAGGGAAGAGAGTTTCATGG+AGG | + | chr6.2:82269945-82269964 | MS.gene065756:intron | 50.0% | |
GAGGGGAAGAGAGAGTTTCA+TGG | + | chr6.2:82269964-82269983 | MS.gene065756:intron | 50.0% | |
GCACCGGACATTAACATGAG+AGG | - | chr6.2:82271359-82271378 | None:intergenic | 50.0% | |
GCCCATTTCATCTGGCAACA+TGG | - | chr6.2:82269746-82269765 | None:intergenic | 50.0% | |
GCGGAATTACCTGCGGATTT+GGG | - | chr6.2:82270726-82270745 | None:intergenic | 50.0% | |
GGGAAGAGAGAGTTTCATGG+AGG | + | chr6.2:82269967-82269986 | MS.gene065756:intron | 50.0% | |
GGGAAGAGAGTTTCATGGAG+GGG | + | chr6.2:82269947-82269966 | MS.gene065756:intron | 50.0% | |
GGTAAAGGGCTTCTGAACGT+TGG | + | chr6.2:82269539-82269558 | MS.gene065756:intron | 50.0% | |
GTAACCGCAAGAATATCCGC+AGG | + | chr6.2:82268507-82268526 | MS.gene065756:CDS | 50.0% | |
GTAAGGAGTTGAGCTGGCAA+AGG | + | chr6.2:82268212-82268231 | MS.gene065756:CDS | 50.0% | |
GTTCCCAGGTATAACCTTCG+TGG | - | chr6.2:82270653-82270672 | None:intergenic | 50.0% | |
TCAAACCTGAGAGTCAGGCA+CGG | - | chr6.2:82269128-82269147 | None:intergenic | 50.0% | |
TCCCATTGTTCCTCTAGCAC+CGG | - | chr6.2:82271375-82271394 | None:intergenic | 50.0% | |
TCCTGCGCTAAATAATCCGC+AGG | + | chr6.2:82268426-82268445 | MS.gene065756:intron | 50.0% | |
TCTTCCTGCGGATTTACCTG+TGG | + | chr6.2:82268578-82268597 | MS.gene065756:intron | 50.0% | |
TGCAGGAAACCTGTTTCCTG+CGG | - | chr6.2:82270694-82270713 | None:intergenic | 50.0% | |
TGCGAGTACGAAGTCGATGA+TGG | - | chr6.2:82268949-82268968 | None:intergenic | 50.0% | |
TGCGGAATTACCTGCGGATT+TGG | - | chr6.2:82270727-82270746 | None:intergenic | 50.0% | |
TGGCAAAATCCGCAGGAAAC+AGG | + | chr6.2:82270682-82270701 | MS.gene065756:CDS | 50.0% | |
TGTTCCCTAGGTAAATCCGC+AGG | - | chr6.2:82270449-82270468 | None:intergenic | 50.0% | |
TTCGTACTCGCATCTTGCTC+AGG | + | chr6.2:82268957-82268976 | MS.gene065756:intron | 50.0% | |
TTGCCAAGGCCCATTTCATC+TGG | - | chr6.2:82269754-82269773 | None:intergenic | 50.0% | |
TTGCCAGATGAAATGGGCCT+TGG | + | chr6.2:82269748-82269767 | MS.gene065756:CDS | 50.0% | |
! | CGAGCTTCAACGAGTTGAGA+AGG | - | chr6.2:82268786-82268805 | None:intergenic | 50.0% |
! | GTTTCCTGCGGATTTTGCCA+AGG | - | chr6.2:82270682-82270701 | None:intergenic | 50.0% |
! | TCCGGTGCTAGAGGAACAAT+GGG | + | chr6.2:82271371-82271390 | MS.gene065756:intron | 50.0% |
! | TCCTGCGGATTATTTAGCGC+AGG | - | chr6.2:82268430-82268449 | None:intergenic | 50.0% |
! | TGCCAAGGATTTAGGTTCCC+AGG | - | chr6.2:82270667-82270686 | None:intergenic | 50.0% |
!! | TCGATGATGGAAACGCAACG+CGG | - | chr6.2:82268936-82268955 | None:intergenic | 50.0% |
!!! | TTTTCCTGTGCCGTTTGCTG+CGG | + | chr6.2:82270483-82270502 | MS.gene065756:intron | 50.0% |
AGCAGGAACCAGTGTTCCCT+AGG | - | chr6.2:82270461-82270480 | None:intergenic | 55.0% | |
AGTGGTCCGAAATCTTCCGC+AGG | - | chr6.2:82268559-82268578 | None:intergenic | 55.0% | |
CTTGCGGTTACCAAATCCGC+AGG | - | chr6.2:82268498-82268517 | None:intergenic | 55.0% | |
GCAGGCAAGGCATGTACGTA+AGG | - | chr6.2:82270901-82270920 | None:intergenic | 55.0% | |
GCAGGTACTTCCGCAGCAAA+CGG | - | chr6.2:82270496-82270515 | None:intergenic | 55.0% | |
GCTACTCAATGACCGCCTTG+TGG | + | chr6.2:82271261-82271280 | MS.gene065756:CDS | 55.0% | |
GGGCCTTGGCAAAACAGTTC+AGG | + | chr6.2:82269762-82269781 | MS.gene065756:CDS | 55.0% | |
TCGCAGGTAAGGAGTTGAGC+TGG | + | chr6.2:82268206-82268225 | MS.gene065756:CDS | 55.0% | |
TGGAAACGCAACGCGGAGAA+CGG | - | chr6.2:82268929-82268948 | None:intergenic | 55.0% | |
TGGTGGGAGAGAGCTTGAAG+CGG | + | chr6.2:82269576-82269595 | MS.gene065756:intron | 55.0% | |
! | GAACGTTGGCGACTGACTCA+CGG | + | chr6.2:82269553-82269572 | MS.gene065756:intron | 55.0% |
! | GTCCGGTGCTAGAGGAACAA+TGG | + | chr6.2:82271370-82271389 | MS.gene065756:intron | 55.0% |
AAGGAACTCACGGTGGGGTC+AGG | - | chr6.2:82269069-82269088 | None:intergenic | 60.0% | |
ACTTCCGCAGCAAACGGCAC+AGG | - | chr6.2:82270490-82270509 | None:intergenic | 60.0% | |
TGTGACCGTGCCTGACTCTC+AGG | + | chr6.2:82269120-82269139 | MS.gene065756:intron | 60.0% | |
! | CGTTGGCGACTGACTCACGG+TGG | + | chr6.2:82269556-82269575 | MS.gene065756:intron | 65.0% |
! | GGCGACTGACTCACGGTGGT+GGG | + | chr6.2:82269560-82269579 | MS.gene065756:intron | 65.0% |
! | TGGCGACTGACTCACGGTGG+TGG | + | chr6.2:82269559-82269578 | MS.gene065756:intron | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr6.2 | gene | 82268190 | 82271793 | 82268190 | ID=MS.gene065756 |
chr6.2 | mRNA | 82268190 | 82271793 | 82268190 | ID=MS.gene065756.t1;Parent=MS.gene065756 |
chr6.2 | exon | 82268190 | 82268253 | 82268190 | ID=MS.gene065756.t1.exon1;Parent=MS.gene065756.t1 |
chr6.2 | CDS | 82268190 | 82268253 | 82268190 | ID=cds.MS.gene065756.t1;Parent=MS.gene065756.t1 |
chr6.2 | exon | 82268448 | 82268528 | 82268448 | ID=MS.gene065756.t1.exon2;Parent=MS.gene065756.t1 |
chr6.2 | CDS | 82268448 | 82268528 | 82268448 | ID=cds.MS.gene065756.t1;Parent=MS.gene065756.t1 |
chr6.2 | exon | 82269743 | 82269783 | 82269743 | ID=MS.gene065756.t1.exon3;Parent=MS.gene065756.t1 |
chr6.2 | CDS | 82269743 | 82269783 | 82269743 | ID=cds.MS.gene065756.t1;Parent=MS.gene065756.t1 |
chr6.2 | exon | 82269874 | 82269911 | 82269874 | ID=MS.gene065756.t1.exon4;Parent=MS.gene065756.t1 |
chr6.2 | CDS | 82269874 | 82269911 | 82269874 | ID=cds.MS.gene065756.t1;Parent=MS.gene065756.t1 |
chr6.2 | exon | 82270608 | 82270735 | 82270608 | ID=MS.gene065756.t1.exon5;Parent=MS.gene065756.t1 |
chr6.2 | CDS | 82270608 | 82270735 | 82270608 | ID=cds.MS.gene065756.t1;Parent=MS.gene065756.t1 |
chr6.2 | exon | 82271026 | 82271316 | 82271026 | ID=MS.gene065756.t1.exon6;Parent=MS.gene065756.t1 |
chr6.2 | CDS | 82271026 | 82271316 | 82271026 | ID=cds.MS.gene065756.t1;Parent=MS.gene065756.t1 |
chr6.2 | exon | 82271402 | 82271793 | 82271402 | ID=MS.gene065756.t1.exon7;Parent=MS.gene065756.t1 |
chr6.2 | CDS | 82271402 | 82271793 | 82271402 | ID=cds.MS.gene065756.t1;Parent=MS.gene065756.t1 |
Gene Sequence |
Protein sequence |