Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065872.t1 | XP_003607405.2 | 94.4 | 1110 | 4 | 3 | 1 | 1085 | 1 | 1077 | 0.00E+00 | 2030 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065872.t1 | Q9SMV6 | 81.4 | 1110 | 146 | 4 | 1 | 1085 | 1 | 1075 | 0.0e+00 | 1758.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065872.t1 | G7JRR9 | 94.4 | 1110 | 4 | 3 | 1 | 1085 | 1 | 1077 | 0.0e+00 | 2030.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052372 | MS.gene065872 | 0.939045 | 2.46E-99 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065872.t1 | MTR_4g077660 | 94.414 | 1110 | 4 | 3 | 1 | 1085 | 1 | 1077 | 0.0 | 2138 |
| MS.gene065872.t1 | MTR_5g007790 | 86.679 | 1111 | 89 | 4 | 1 | 1085 | 1 | 1078 | 0.0 | 1953 |
| MS.gene065872.t1 | MTR_8g013700 | 61.776 | 1070 | 239 | 14 | 1 | 1039 | 1 | 931 | 0.0 | 1219 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065872.t1 | AT5G17020 | 81.441 | 1110 | 146 | 4 | 1 | 1085 | 1 | 1075 | 0.0 | 1849 |
| MS.gene065872.t1 | AT5G17020 | 80.090 | 1110 | 146 | 5 | 1 | 1085 | 1 | 1060 | 0.0 | 1810 |
| MS.gene065872.t1 | AT3G03110 | 78.198 | 1110 | 183 | 4 | 1 | 1085 | 1 | 1076 | 0.0 | 1765 |
Find 215 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAATAGTCCATTAACAAAT+TGG | 0.194943 | 4.4:+74598762 | None:intergenic |
| ACAAGTGTTGCATCTTCTTT+AGG | 0.217241 | 4.4:-74600942 | MS.gene065872:CDS |
| TGATGTTCTTGTTCAATATA+AGG | 0.232496 | 4.4:-74604820 | MS.gene065872:intron |
| CTCATAGTTGAAGATGAAAA+TGG | 0.234394 | 4.4:-74604873 | MS.gene065872:CDS |
| GAATATAACAACTTTGCTTT+TGG | 0.253627 | 4.4:-74605878 | MS.gene065872:CDS |
| TGTTTACTATTGTAGCAAAA+AGG | 0.257518 | 4.4:+74600412 | None:intergenic |
| CAGGTGGCATCCCTTCAATT+TGG | 0.261199 | 4.4:-74606526 | MS.gene065872:CDS |
| GTATCAGGAAATCTCGTATA+TGG | 0.269276 | 4.4:+74598708 | None:intergenic |
| AGCAAGCAAAAGACCTGATT+TGG | 0.273590 | 4.4:+74601663 | None:intergenic |
| ACCAATGATGGATCCTGTTT+TGG | 0.280550 | 4.4:-74600484 | MS.gene065872:CDS |
| TATTCTCTTGAGTGGATTCC+AGG | 0.283589 | 4.4:+74605896 | None:intergenic |
| TAAATTGATCGAGACATTCT+TGG | 0.284312 | 4.4:-74600550 | MS.gene065872:CDS |
| CAGGTTACCCAATTTGTTAA+TGG | 0.289036 | 4.4:-74598770 | MS.gene065872:CDS |
| CAAAGAATGCTTTCTATTCC+AGG | 0.320623 | 4.4:-74598286 | MS.gene065872:CDS |
| TTTATGTTCATTTATTTCCT+TGG | 0.324254 | 4.4:-74600362 | MS.gene065872:CDS |
| CATCTCCGACATCATTGTTC+AGG | 0.324705 | 4.4:-74608517 | MS.gene065872:intron |
| CAAGTGTTGCATCTTCTTTA+GGG | 0.333806 | 4.4:-74600941 | MS.gene065872:CDS |
| CACGTATCAGCTCAGCCCTT+TGG | 0.340622 | 4.4:+74606839 | None:intergenic |
| CAGGTATCGGCAATGCTTCC+TGG | 0.341710 | 4.4:-74605008 | MS.gene065872:CDS |
| GGAGATGCTGAAGAAGTTTC+AGG | 0.344422 | 4.4:-74599458 | MS.gene065872:intron |
| TGCGAACTTGATGGGACTTC+AGG | 0.345750 | 4.4:-74605640 | MS.gene065872:intron |
| AATAGGTCTGTTTGGACTAC+TGG | 0.348346 | 4.4:-74605722 | MS.gene065872:intron |
| TTATGTTCTGCTACTTCCTA+AGG | 0.350312 | 4.4:-74600304 | MS.gene065872:CDS |
| AGGTGGCATCCCTTCAATTT+GGG | 0.357467 | 4.4:-74606525 | MS.gene065872:CDS |
| GTTTGAGCCACATCGAAGTT+TGG | 0.357770 | 4.4:-74605679 | MS.gene065872:CDS |
| TTGAAAATAATAGGTCTGTT+TGG | 0.359269 | 4.4:-74605730 | MS.gene065872:intron |
| AATACACTCTGCTGGGCAAT+TGG | 0.360947 | 4.4:-74604151 | MS.gene065872:CDS |
| ACGTATCAGCTCAGCCCTTT+GGG | 0.361354 | 4.4:+74606840 | None:intergenic |
| CATTGCATGCCTTCTTATCA+TGG | 0.362756 | 4.4:-74606804 | MS.gene065872:CDS |
| GTGTGCTAACTGAGCCCCTT+TGG | 0.363467 | 4.4:-74598968 | MS.gene065872:CDS |
| TTGACCTTTCAGCTGGAAAC+TGG | 0.366423 | 4.4:-74598990 | MS.gene065872:intron |
| GACTGTGCTTAATATATTGC+AGG | 0.367551 | 4.4:-74601458 | MS.gene065872:intron |
| TCAGCAATTGAAGCTTGTTA+TGG | 0.371534 | 4.4:-74599548 | MS.gene065872:intron |
| ATTCAATCATGTGGGCATTT+CGG | 0.372536 | 4.4:-74599525 | MS.gene065872:CDS |
| TATATTCATGGGCCAATTGC+AGG | 0.373962 | 4.4:-74606467 | MS.gene065872:intron |
| CAGAAATGGATGGAAATTAT+AGG | 0.375812 | 4.4:-74601529 | MS.gene065872:CDS |
| AGATTTCGATATGCTGGAAC+TGG | 0.377398 | 4.4:+74606641 | None:intergenic |
| TTCGATGCAGTTCGGTTAAG+AGG | 0.380505 | 4.4:-74600581 | MS.gene065872:intron |
| ACCTCAGCTGTTGTCATGTT+CGG | 0.382138 | 4.4:+74598861 | None:intergenic |
| TTCTTATCATGGATCCCCTT+GGG | 0.383666 | 4.4:-74606793 | MS.gene065872:CDS |
| GCTCAACATTATATTAGTTC+AGG | 0.386914 | 4.4:-74608327 | MS.gene065872:intron |
| ATAAAGCTTCGCCATCTTGC+TGG | 0.392745 | 4.4:+74608134 | None:intergenic |
| TCAACTATGAGAACCTCTTC+GGG | 0.394916 | 4.4:+74604885 | None:intergenic |
| GAAAGGAATATTGCTGAAAC+AGG | 0.395957 | 4.4:-74599496 | MS.gene065872:CDS |
| AAGGCGTAATTAAATATAGA+TGG | 0.397062 | 4.4:-74608581 | MS.gene065872:CDS |
| ACAATTTGTGCCACCAATGA+TGG | 0.397908 | 4.4:-74600496 | MS.gene065872:CDS |
| CAAGATGTATGGTATATTCA+TGG | 0.397963 | 4.4:-74606479 | MS.gene065872:CDS |
| AAGAACATCATTGTCCTTCA+AGG | 0.398870 | 4.4:+74604833 | None:intergenic |
| ATGACTTGAAGCCACATATC+AGG | 0.399612 | 4.4:+74609600 | None:intergenic |
| CAGTACCTGCTCTTCTATCA+TGG | 0.400683 | 4.4:+74604114 | None:intergenic |
| TTCAACTATGAGAACCTCTT+CGG | 0.400992 | 4.4:+74604884 | None:intergenic |
| TTTGTATCTGAACTTCTATC+AGG | 0.404322 | 4.4:-74601926 | MS.gene065872:CDS |
| TGTTCATTTATTTCCTTGGT+TGG | 0.404599 | 4.4:-74600358 | MS.gene065872:CDS |
| AAGAACTTAAGCCGGTGCTC+AGG | 0.405513 | 4.4:+74599766 | None:intergenic |
| TGTGCTAACTGAGCCCCTTT+GGG | 0.407002 | 4.4:-74598967 | MS.gene065872:CDS |
| ATGCTTCCTGGTATGGTTGA+TGG | 0.407442 | 4.4:-74604996 | MS.gene065872:CDS |
| TGGGCAATTGGATCTATATC+TGG | 0.409569 | 4.4:-74604139 | MS.gene065872:CDS |
| TGAGACACATCCTGGAGTTC+AGG | 0.412850 | 4.4:-74603107 | MS.gene065872:intron |
| ATCTCGCTGCTCGGCAGGTA+AGG | 0.415514 | 4.4:+74608554 | None:intergenic |
| CTTCTTATCATGGATCCCCT+TGG | 0.418863 | 4.4:-74606794 | MS.gene065872:CDS |
| TGCAGCTTCTGCGAACTTGA+TGG | 0.419691 | 4.4:-74605649 | MS.gene065872:CDS |
| TGAGGAGACTCTTATTTACT+TGG | 0.420430 | 4.4:-74604624 | MS.gene065872:intron |
| CTTAGATCCAGTGCCGTAGA+AGG | 0.421045 | 4.4:+74609989 | None:intergenic |
| GATCCAAACACACCTGCAAT+TGG | 0.423360 | 4.4:+74606455 | None:intergenic |
| TTAGCCGCTGCGACAAGATC+AGG | 0.425401 | 4.4:+74608110 | None:intergenic |
| TGAAGGATCAAGATGTAATA+CGG | 0.426213 | 4.4:-74601480 | MS.gene065872:CDS |
| CTAGCATAATCTCCCAAAAC+AGG | 0.427313 | 4.4:+74600471 | None:intergenic |
| TTGCCATGTGCATATGCCTC+GGG | 0.433269 | 4.4:+74606299 | None:intergenic |
| GAGTGTATTCAAATTGTTCC+AGG | 0.433903 | 4.4:+74604165 | None:intergenic |
| ACTGATCTGTTTGTCAAGCC+AGG | 0.438397 | 4.4:-74599704 | MS.gene065872:intron |
| TGAATTTCTTCAGCGGTTGA+TGG | 0.438441 | 4.4:-74601691 | MS.gene065872:CDS |
| TCTTTCACTCAGGTTCTTGA+AGG | 0.445088 | 4.4:-74608600 | MS.gene065872:intron |
| GTTGATGGAGCTCCCAAATC+AGG | 0.445324 | 4.4:-74601676 | MS.gene065872:intron |
| AAATAGTCCATTAACAAATT+GGG | 0.445619 | 4.4:+74598763 | None:intergenic |
| TCAAGATCTGCAATAGTGAT+TGG | 0.450448 | 4.4:+74601899 | None:intergenic |
| AGCTTAAACAATCATTGAAC+AGG | 0.451004 | 4.4:-74607912 | MS.gene065872:intron |
| ATCGGCAATGCTTCCTGGTA+TGG | 0.453160 | 4.4:-74605003 | MS.gene065872:CDS |
| AGATGAAATGGTGGACTCAT+AGG | 0.454147 | 4.4:-74598239 | None:intergenic |
| GATCGAGACATTCTTGGATA+AGG | 0.455063 | 4.4:-74600544 | MS.gene065872:CDS |
| GCATCTCCAACAACAGGTTC+AGG | 0.456467 | 4.4:+74599473 | None:intergenic |
| ACAATTTGAATACACTCTGC+TGG | 0.457803 | 4.4:-74604159 | MS.gene065872:CDS |
| ACCTCAGATTCCCTTGCATC+AGG | 0.459982 | 4.4:+74600441 | None:intergenic |
| TTTCATCTTGCAACTCGATA+GGG | 0.460559 | 4.4:+74598254 | None:intergenic |
| TGCTTCCTGGTATGGTTGAT+GGG | 0.462235 | 4.4:-74604995 | MS.gene065872:CDS |
| TCTTCAGCATCTCCAACAAC+AGG | 0.463831 | 4.4:+74599467 | None:intergenic |
| TCGATAGGGGCAATCAGCCC+TGG | 0.464759 | 4.4:+74598268 | None:intergenic |
| ATTTGTGTTAGGCGGCAGTA+TGG | 0.464788 | 4.4:+74606325 | None:intergenic |
| TATCGAGTTGCAAGATGAAA+TGG | 0.464848 | 4.4:-74598251 | MS.gene065872:CDS |
| ATTCCATCTCGCTGCTCGGC+AGG | 0.465981 | 4.4:+74608549 | None:intergenic |
| GCCACCGTCGCCGCCTTCTA+CGG | 0.469747 | 4.4:-74610002 | MS.gene065872:CDS |
| TTTATGCATGAGACACATCC+TGG | 0.470454 | 4.4:-74603115 | MS.gene065872:CDS |
| AACAGGCCTGAACCTGTTGT+TGG | 0.470757 | 4.4:-74599479 | MS.gene065872:CDS |
| CCCAAAACAGGATCCATCAT+TGG | 0.476317 | 4.4:+74600483 | None:intergenic |
| CAACCTTTCCGTTCGAAATG+AGG | 0.482971 | 4.4:+74608361 | None:intergenic |
| GCTGAAGATCAACCACAGAT+TGG | 0.484039 | 4.4:-74600522 | MS.gene065872:CDS |
| ATTTCATCTTGCAACTCGAT+AGG | 0.485254 | 4.4:+74598253 | None:intergenic |
| GCAAGCAAAAGACCTGATTT+GGG | 0.487434 | 4.4:+74601664 | None:intergenic |
| CATTGTCCTTCAAGGTTTCA+CGG | 0.489746 | 4.4:+74604841 | None:intergenic |
| GCAGGTTCACATCCGCATCC+TGG | 0.490283 | 4.4:-74605914 | MS.gene065872:intron |
| TTTGGACTACTGGAATTCCT+TGG | 0.490547 | 4.4:-74605712 | MS.gene065872:CDS |
| GCCTCGGGGATATTTGTGTT+AGG | 0.490648 | 4.4:+74606314 | None:intergenic |
| AAGGCATACAGATTCGTAGA+AGG | 0.492583 | 4.4:+74601859 | None:intergenic |
| AGTTCTGTAATCAGTTCTAC+AGG | 0.497293 | 4.4:-74599195 | MS.gene065872:CDS |
| GCAGCTTCTGCGAACTTGAT+GGG | 0.497457 | 4.4:-74605648 | MS.gene065872:CDS |
| TGGGTTCAAATTACATGTCC+TGG | 0.499157 | 4.4:-74599110 | MS.gene065872:CDS |
| AGCGTAAGATTTCGATATGC+TGG | 0.500147 | 4.4:+74606635 | None:intergenic |
| CATCTTATGTGAAACTTCTA+CGG | 0.502876 | 4.4:-74600674 | MS.gene065872:intron |
| TCGCTTGATAGGTATGTTGT+TGG | 0.504977 | 4.4:-74603205 | MS.gene065872:intron |
| TCATAGTTGAAGATGAAAAT+GGG | 0.505293 | 4.4:-74604872 | MS.gene065872:CDS |
| TATCAGGAAATCTCGTATAT+GGG | 0.506963 | 4.4:+74598709 | None:intergenic |
| AACAACTCAGTGGTGAGGAT+TGG | 0.507258 | 4.4:-74604189 | MS.gene065872:CDS |
| AAATGCTGATAAGATATTCA+AGG | 0.507542 | 4.4:+74605854 | None:intergenic |
| CAACGTCGTCAGCTTTATGC+TGG | 0.507554 | 4.4:-74604954 | MS.gene065872:CDS |
| TATGTTCTGCTACTTCCTAA+GGG | 0.510299 | 4.4:-74600303 | MS.gene065872:intron |
| AGATCATTGTGATTTGAGGC+AGG | 0.510406 | 4.4:+74600910 | None:intergenic |
| AGTTGTTATATTCTCTTGAG+TGG | 0.513869 | 4.4:+74605888 | None:intergenic |
| CCTGGTATGGTTGATGGGCA+CGG | 0.514902 | 4.4:-74604990 | MS.gene065872:CDS |
| CCATGATGATACTGAAAAGC+AGG | 0.516021 | 4.4:-74604591 | MS.gene065872:intron |
| TGGACATGTTGAATGTGTAC+AGG | 0.517694 | 4.4:-74600884 | MS.gene065872:intron |
| GTCGCCGCCTTCTACGGCAC+TGG | 0.520083 | 4.4:-74609996 | MS.gene065872:CDS |
| ATGAGGTGAAGAACAGCGCC+AGG | 0.521707 | 4.4:+74606165 | None:intergenic |
| CTGAGCTTCTCAGCGGCCAT+CGG | 0.521732 | 4.4:+74610062 | None:intergenic |
| ATCAAGTTCGCAGAAGCTGC+AGG | 0.523514 | 4.4:+74605651 | None:intergenic |
| TGTGCTATCGGCATCCCAAA+GGG | 0.529449 | 4.4:-74606854 | MS.gene065872:CDS |
| CAAAGATCTCTATGCTGAAG+AGG | 0.531854 | 4.4:-74598335 | MS.gene065872:CDS |
| GCCGTAGAAGGCGGCGACGG+TGG | 0.532551 | 4.4:+74610001 | None:intergenic |
| TATTGTCCGTGAAACCTTGA+AGG | 0.534873 | 4.4:-74604847 | MS.gene065872:CDS |
| TGGTTCCATGATAGAAGAGC+AGG | 0.535654 | 4.4:-74604119 | MS.gene065872:intron |
| CAAGGGGATCCATGATAAGA+AGG | 0.538201 | 4.4:+74606795 | None:intergenic |
| GAAGAGAGAAGAACTTAAGC+CGG | 0.538221 | 4.4:+74599758 | None:intergenic |
| ACTTGTAGCAACATCCCAAA+GGG | 0.539515 | 4.4:+74598953 | None:intergenic |
| GATAGAAGTTCAGATACAAA+TGG | 0.542603 | 4.4:+74601929 | None:intergenic |
| GACTTGTAGCAACATCCCAA+AGG | 0.543415 | 4.4:+74598952 | None:intergenic |
| TTAGGCATTTATACAGAACC+TGG | 0.546070 | 4.4:-74606183 | MS.gene065872:intron |
| AGCATTCTCAACTTTGACAT+GGG | 0.546626 | 4.4:+74604930 | None:intergenic |
| GGGCATTTCGGCACACAGAA+AGG | 0.547271 | 4.4:-74599513 | MS.gene065872:CDS |
| TTTCATTCCATCTCGCTGCT+CGG | 0.547958 | 4.4:+74608545 | None:intergenic |
| CAATTTGAATACACTCTGCT+GGG | 0.548023 | 4.4:-74604158 | MS.gene065872:CDS |
| CCGTGCCCATCAACCATACC+AGG | 0.548181 | 4.4:+74604990 | None:intergenic |
| ATGGATGGAAATTATAGGCC+AGG | 0.548256 | 4.4:-74601524 | MS.gene065872:CDS |
| CTAGGAATGCTCCTGATGCA+AGG | 0.552257 | 4.4:-74600452 | MS.gene065872:CDS |
| AAGATGTATGGTATATTCAT+GGG | 0.555548 | 4.4:-74606478 | MS.gene065872:CDS |
| TCGATGCAGTTCGGTTAAGA+GGG | 0.559242 | 4.4:-74600580 | MS.gene065872:intron |
| TTGAAGATTACCCTGAGCAC+CGG | 0.559648 | 4.4:-74599777 | MS.gene065872:CDS |
| GTGCAATATGTCAAGATGTA+TGG | 0.559915 | 4.4:-74606490 | MS.gene065872:CDS |
| TGCAAAACAATCCTGATATG+TGG | 0.562075 | 4.4:-74609611 | MS.gene065872:CDS |
| CTACTGGAATTCCTTGGTGT+CGG | 0.563467 | 4.4:-74605706 | MS.gene065872:CDS |
| CTTGACAAACAGATCAGTGC+AGG | 0.563746 | 4.4:+74599709 | None:intergenic |
| CCCAGGCTTATGAAAAGTAT+CGG | 0.564406 | 4.4:+74599129 | None:intergenic |
| TCGAGTAACGGAACATCGAT+CGG | 0.565699 | 4.4:+74610026 | None:intergenic |
| AGGAAAACAATGAGTAGCTA+TGG | 0.566018 | 4.4:+74599729 | None:intergenic |
| GATCTGCAATAGTGATTGGA+AGG | 0.567155 | 4.4:+74601903 | None:intergenic |
| GCGACGGTGGCGTCGAGTAA+CGG | 0.567435 | 4.4:+74610014 | None:intergenic |
| TTCATCTTGCAACTCGATAG+GGG | 0.569366 | 4.4:+74598255 | None:intergenic |
| AAAGAATGCTTTCTATTCCA+GGG | 0.571488 | 4.4:-74598285 | MS.gene065872:CDS |
| CTTGAGTGGATTCCAGGATG+CGG | 0.572251 | 4.4:+74605902 | None:intergenic |
| TTATATATTTGAATCACCGT+TGG | 0.573963 | 4.4:-74606770 | MS.gene065872:intron |
| GTTATGCTTATATGTGCTAT+CGG | 0.574920 | 4.4:-74606866 | MS.gene065872:CDS |
| TTACCTGCCGAGCAGCGAGA+TGG | 0.576301 | 4.4:-74608552 | MS.gene065872:CDS |
| AGAACTTAAGCCGGTGCTCA+GGG | 0.577552 | 4.4:+74599767 | None:intergenic |
| AGCATGAGTGGCCAGCAAGA+TGG | 0.577675 | 4.4:-74608145 | MS.gene065872:CDS |
| GTAGAAGGAGTGTATCTGAT+GGG | 0.578468 | 4.4:+74601874 | None:intergenic |
| ATTGCCATGTGCATATGCCT+CGG | 0.578592 | 4.4:+74606298 | None:intergenic |
| TCTCTATGCTGAAGAGGCTG+CGG | 0.580599 | 4.4:-74598329 | MS.gene065872:CDS |
| TCCTGATGCAAGGGAATCTG+AGG | 0.583164 | 4.4:-74600442 | MS.gene065872:CDS |
| TTGTTATGGATTCAATCATG+TGG | 0.583890 | 4.4:-74599534 | MS.gene065872:CDS |
| ATGTGCTATCGGCATCCCAA+AGG | 0.587524 | 4.4:-74606855 | MS.gene065872:CDS |
| AAAACAAATGCTGAAGCACC+AGG | 0.588693 | 4.4:+74599092 | None:intergenic |
| CGTAGAAGGAGTGTATCTGA+TGG | 0.588720 | 4.4:+74601873 | None:intergenic |
| TGATTCAAATATATAACCCA+AGG | 0.590786 | 4.4:+74606777 | None:intergenic |
| CGTGTAATCTGCAGATGCTG+AGG | 0.591084 | 4.4:-74604222 | MS.gene065872:intron |
| AAGCATTCTCAACTTTGACA+TGG | 0.596752 | 4.4:+74604929 | None:intergenic |
| AGGCCTCATTTCGAACGGAA+AGG | 0.600634 | 4.4:-74608364 | MS.gene065872:CDS |
| TAGGAATGCTCCTGATGCAA+GGG | 0.607736 | 4.4:-74600451 | MS.gene065872:CDS |
| TGTTATGGATTCAATCATGT+GGG | 0.609757 | 4.4:-74599533 | MS.gene065872:CDS |
| AGTGCCGTAGAAGGCGGCGA+CGG | 0.612587 | 4.4:+74609998 | None:intergenic |
| TCAAAGTAGCATACCAACCA+AGG | 0.613468 | 4.4:+74600345 | None:intergenic |
| TCGGGGATATTTGTGTTAGG+CGG | 0.615711 | 4.4:+74606317 | None:intergenic |
| CGGCTCAGAGAGAAAGAGAA+CGG | 0.616816 | 4.4:-74598309 | MS.gene065872:CDS |
| GATTCAAATATATAACCCAA+GGG | 0.617377 | 4.4:+74606778 | None:intergenic |
| GGCATGCAATGTAGATAGTG+TGG | 0.618242 | 4.4:+74606816 | None:intergenic |
| GATTTCGATATGCTGGAACT+GGG | 0.620969 | 4.4:+74606642 | None:intergenic |
| ATCCCCGAGGCATATGCACA+TGG | 0.622830 | 4.4:-74606302 | MS.gene065872:CDS |
| AATCTATGTGAAATCACGAA+GGG | 0.623585 | 4.4:-74603338 | MS.gene065872:CDS |
| AACAATGAGTAGCTATGGCG+CGG | 0.631317 | 4.4:+74599734 | None:intergenic |
| GAACATAAGCATGTAGAAAG+CGG | 0.631333 | 4.4:+74600319 | None:intergenic |
| AGAGAGATGAATTTCTTCAG+CGG | 0.635384 | 4.4:-74601698 | MS.gene065872:CDS |
| AAAACAGGATCCATCATTGG+TGG | 0.638516 | 4.4:+74600486 | None:intergenic |
| AATGCTTATGATCTGTCGAA+TGG | 0.640679 | 4.4:-74604913 | MS.gene065872:CDS |
| AGATCCAGTGCCGTAGAAGG+CGG | 0.642341 | 4.4:+74609992 | None:intergenic |
| AAGTAAACAACTCAGTGGTG+AGG | 0.642832 | 4.4:-74604194 | MS.gene065872:CDS |
| TAATACCTGAACAATGATGT+CGG | 0.643354 | 4.4:+74608512 | None:intergenic |
| CAACGAGGCCTCATTTCGAA+CGG | 0.643519 | 4.4:-74608369 | MS.gene065872:CDS |
| TATTCCTGATCTTGTCGCAG+CGG | 0.643593 | 4.4:-74608114 | MS.gene065872:CDS |
| TCCGAACATGACAACAGCTG+AGG | 0.645401 | 4.4:-74598862 | MS.gene065872:intron |
| TCGAATGGCTAAACCCGAAG+AGG | 0.647046 | 4.4:-74604898 | MS.gene065872:CDS |
| AGGACATGTAATTTGAACCC+AGG | 0.648020 | 4.4:+74599112 | None:intergenic |
| GCATTACTTGGGTATGACTG+TGG | 0.648596 | 4.4:+74598930 | None:intergenic |
| CGGCACTGGATCTAAGCAAG+AGG | 0.649693 | 4.4:-74609982 | MS.gene065872:intron |
| TCAGTGGTGAGGATTGGACC+TGG | 0.651890 | 4.4:-74604183 | MS.gene065872:CDS |
| CTCAAACAGCTCCGACACCA+AGG | 0.652968 | 4.4:+74605695 | None:intergenic |
| AAATCTATGTGAAATCACGA+AGG | 0.654119 | 4.4:-74603339 | MS.gene065872:CDS |
| CGAGTTGCAAGATGAAATGG+TGG | 0.657463 | 4.4:-74598248 | MS.gene065872:CDS |
| TAGAAGGAGTGTATCTGATG+GGG | 0.661038 | 4.4:+74601875 | None:intergenic |
| TACGCTGCAATGTTTAACAG+AGG | 0.663731 | 4.4:-74606618 | MS.gene065872:intron |
| TGCATAGCTTTCTAGCAACG+AGG | 0.670460 | 4.4:-74608384 | MS.gene065872:intron |
| TGCCATGTGCATATGCCTCG+GGG | 0.678438 | 4.4:+74606300 | None:intergenic |
| AACGATCTGTGAGAATTGCA+TGG | 0.684162 | 4.4:-74608078 | MS.gene065872:CDS |
| GGATTATCCAAACTTCGATG+TGG | 0.699508 | 4.4:+74605672 | None:intergenic |
| ATTCAAATATATAACCCAAG+GGG | 0.700367 | 4.4:+74606779 | None:intergenic |
| AAAACGGCTTCAAATATGCG+AGG | 0.702127 | 4.4:+74600199 | None:intergenic |
| AAATTAAGTAAACAACTCAG+TGG | 0.731890 | 4.4:-74604199 | MS.gene065872:CDS |
| CTTGTAGCAACATCCCAAAG+GGG | 0.739875 | 4.4:+74598954 | None:intergenic |
| GCCTAACACAAATATCCCCG+AGG | 0.742982 | 4.4:-74606315 | MS.gene065872:CDS |
| CAAATCTCTGAGCTTCTCAG+CGG | 0.769266 | 4.4:+74610055 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 74598240 | 74610081 | 74598240 | ID=MS.gene065872 |
| chr4.4 | mRNA | 74598240 | 74610081 | 74598240 | ID=MS.gene065872.t1;Parent=MS.gene065872 |
| chr4.4 | exon | 74609983 | 74610081 | 74609983 | ID=MS.gene065872.t1.exon1;Parent=MS.gene065872.t1 |
| chr4.4 | CDS | 74609983 | 74610081 | 74609983 | ID=cds.MS.gene065872.t1;Parent=MS.gene065872.t1 |
| chr4.4 | exon | 74609548 | 74609664 | 74609548 | ID=MS.gene065872.t1.exon2;Parent=MS.gene065872.t1 |
| chr4.4 | CDS | 74609548 | 74609664 | 74609548 | ID=cds.MS.gene065872.t1;Parent=MS.gene065872.t1 |
| chr4.4 | exon | 74608518 | 74608610 | 74608518 | ID=MS.gene065872.t1.exon3;Parent=MS.gene065872.t1 |
| chr4.4 | CDS | 74608518 | 74608610 | 74608518 | ID=cds.MS.gene065872.t1;Parent=MS.gene065872.t1 |
| chr4.4 | exon | 74608328 | 74608399 | 74608328 | ID=MS.gene065872.t1.exon4;Parent=MS.gene065872.t1 |
| chr4.4 | CDS | 74608328 | 74608399 | 74608328 | ID=cds.MS.gene065872.t1;Parent=MS.gene065872.t1 |
| chr4.4 | exon | 74608067 | 74608174 | 74608067 | ID=MS.gene065872.t1.exon5;Parent=MS.gene065872.t1 |
| chr4.4 | CDS | 74608067 | 74608174 | 74608067 | ID=cds.MS.gene065872.t1;Parent=MS.gene065872.t1 |
| chr4.4 | exon | 74607913 | 74607995 | 74607913 | ID=MS.gene065872.t1.exon6;Parent=MS.gene065872.t1 |
| chr4.4 | CDS | 74607913 | 74607995 | 74607913 | ID=cds.MS.gene065872.t1;Parent=MS.gene065872.t1 |
| chr4.4 | exon | 74606771 | 74606909 | 74606771 | ID=MS.gene065872.t1.exon7;Parent=MS.gene065872.t1 |
| chr4.4 | CDS | 74606771 | 74606909 | 74606771 | ID=cds.MS.gene065872.t1;Parent=MS.gene065872.t1 |
| chr4.4 | exon | 74606619 | 74606687 | 74606619 | ID=MS.gene065872.t1.exon8;Parent=MS.gene065872.t1 |
| chr4.4 | CDS | 74606619 | 74606687 | 74606619 | ID=cds.MS.gene065872.t1;Parent=MS.gene065872.t1 |
| chr4.4 | exon | 74606468 | 74606545 | 74606468 | ID=MS.gene065872.t1.exon9;Parent=MS.gene065872.t1 |
| chr4.4 | CDS | 74606468 | 74606545 | 74606468 | ID=cds.MS.gene065872.t1;Parent=MS.gene065872.t1 |
| chr4.4 | exon | 74606286 | 74606348 | 74606286 | ID=MS.gene065872.t1.exon10;Parent=MS.gene065872.t1 |
| chr4.4 | CDS | 74606286 | 74606348 | 74606286 | ID=cds.MS.gene065872.t1;Parent=MS.gene065872.t1 |
| chr4.4 | exon | 74606157 | 74606201 | 74606157 | ID=MS.gene065872.t1.exon11;Parent=MS.gene065872.t1 |
| chr4.4 | CDS | 74606157 | 74606201 | 74606157 | ID=cds.MS.gene065872.t1;Parent=MS.gene065872.t1 |
| chr4.4 | exon | 74605825 | 74605932 | 74605825 | ID=MS.gene065872.t1.exon12;Parent=MS.gene065872.t1 |
| chr4.4 | CDS | 74605825 | 74605932 | 74605825 | ID=cds.MS.gene065872.t1;Parent=MS.gene065872.t1 |
| chr4.4 | exon | 74605641 | 74605739 | 74605641 | ID=MS.gene065872.t1.exon13;Parent=MS.gene065872.t1 |
| chr4.4 | CDS | 74605641 | 74605739 | 74605641 | ID=cds.MS.gene065872.t1;Parent=MS.gene065872.t1 |
| chr4.4 | exon | 74604821 | 74605027 | 74604821 | ID=MS.gene065872.t1.exon14;Parent=MS.gene065872.t1 |
| chr4.4 | CDS | 74604821 | 74605027 | 74604821 | ID=cds.MS.gene065872.t1;Parent=MS.gene065872.t1 |
| chr4.4 | exon | 74604592 | 74604642 | 74604592 | ID=MS.gene065872.t1.exon15;Parent=MS.gene065872.t1 |
| chr4.4 | CDS | 74604592 | 74604642 | 74604592 | ID=cds.MS.gene065872.t1;Parent=MS.gene065872.t1 |
| chr4.4 | exon | 74604120 | 74604230 | 74604120 | ID=MS.gene065872.t1.exon16;Parent=MS.gene065872.t1 |
| chr4.4 | CDS | 74604120 | 74604230 | 74604120 | ID=cds.MS.gene065872.t1;Parent=MS.gene065872.t1 |
| chr4.4 | exon | 74603302 | 74603399 | 74603302 | ID=MS.gene065872.t1.exon17;Parent=MS.gene065872.t1 |
| chr4.4 | CDS | 74603302 | 74603399 | 74603302 | ID=cds.MS.gene065872.t1;Parent=MS.gene065872.t1 |
| chr4.4 | exon | 74603108 | 74603216 | 74603108 | ID=MS.gene065872.t1.exon18;Parent=MS.gene065872.t1 |
| chr4.4 | CDS | 74603108 | 74603216 | 74603108 | ID=cds.MS.gene065872.t1;Parent=MS.gene065872.t1 |
| chr4.4 | exon | 74601868 | 74601966 | 74601868 | ID=MS.gene065872.t1.exon19;Parent=MS.gene065872.t1 |
| chr4.4 | CDS | 74601868 | 74601966 | 74601868 | ID=cds.MS.gene065872.t1;Parent=MS.gene065872.t1 |
| chr4.4 | exon | 74601677 | 74601757 | 74601677 | ID=MS.gene065872.t1.exon20;Parent=MS.gene065872.t1 |
| chr4.4 | CDS | 74601677 | 74601757 | 74601677 | ID=cds.MS.gene065872.t1;Parent=MS.gene065872.t1 |
| chr4.4 | exon | 74601459 | 74601548 | 74601459 | ID=MS.gene065872.t1.exon21;Parent=MS.gene065872.t1 |
| chr4.4 | CDS | 74601459 | 74601548 | 74601459 | ID=cds.MS.gene065872.t1;Parent=MS.gene065872.t1 |
| chr4.4 | exon | 74600885 | 74600970 | 74600885 | ID=MS.gene065872.t1.exon22;Parent=MS.gene065872.t1 |
| chr4.4 | CDS | 74600885 | 74600970 | 74600885 | ID=cds.MS.gene065872.t1;Parent=MS.gene065872.t1 |
| chr4.4 | exon | 74600675 | 74600755 | 74600675 | ID=MS.gene065872.t1.exon23;Parent=MS.gene065872.t1 |
| chr4.4 | CDS | 74600675 | 74600755 | 74600675 | ID=cds.MS.gene065872.t1;Parent=MS.gene065872.t1 |
| chr4.4 | exon | 74600304 | 74600593 | 74600304 | ID=MS.gene065872.t1.exon24;Parent=MS.gene065872.t1 |
| chr4.4 | CDS | 74600304 | 74600593 | 74600304 | ID=cds.MS.gene065872.t1;Parent=MS.gene065872.t1 |
| chr4.4 | exon | 74600183 | 74600241 | 74600183 | ID=MS.gene065872.t1.exon25;Parent=MS.gene065872.t1 |
| chr4.4 | CDS | 74600183 | 74600241 | 74600183 | ID=cds.MS.gene065872.t1;Parent=MS.gene065872.t1 |
| chr4.4 | exon | 74599705 | 74599815 | 74599705 | ID=MS.gene065872.t1.exon26;Parent=MS.gene065872.t1 |
| chr4.4 | CDS | 74599705 | 74599815 | 74599705 | ID=cds.MS.gene065872.t1;Parent=MS.gene065872.t1 |
| chr4.4 | exon | 74599459 | 74599566 | 74599459 | ID=MS.gene065872.t1.exon27;Parent=MS.gene065872.t1 |
| chr4.4 | CDS | 74599459 | 74599566 | 74599459 | ID=cds.MS.gene065872.t1;Parent=MS.gene065872.t1 |
| chr4.4 | exon | 74599087 | 74599224 | 74599087 | ID=MS.gene065872.t1.exon28;Parent=MS.gene065872.t1 |
| chr4.4 | CDS | 74599087 | 74599224 | 74599087 | ID=cds.MS.gene065872.t1;Parent=MS.gene065872.t1 |
| chr4.4 | exon | 74598863 | 74599000 | 74598863 | ID=MS.gene065872.t1.exon29;Parent=MS.gene065872.t1 |
| chr4.4 | CDS | 74598863 | 74599000 | 74598863 | ID=cds.MS.gene065872.t1;Parent=MS.gene065872.t1 |
| chr4.4 | exon | 74598685 | 74598789 | 74598685 | ID=MS.gene065872.t1.exon30;Parent=MS.gene065872.t1 |
| chr4.4 | CDS | 74598685 | 74598789 | 74598685 | ID=cds.MS.gene065872.t1;Parent=MS.gene065872.t1 |
| chr4.4 | exon | 74598240 | 74598362 | 74598240 | ID=MS.gene065872.t1.exon31;Parent=MS.gene065872.t1 |
| chr4.4 | CDS | 74598240 | 74598362 | 74598240 | ID=cds.MS.gene065872.t1;Parent=MS.gene065872.t1 |
| Gene Sequence |
| Protein sequence |
