Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065873.t1 | XP_003607405.2 | 99.6 | 1077 | 4 | 0 | 1 | 1077 | 1 | 1077 | 0.00E+00 | 2116.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065873.t1 | Q9SMV6 | 86.2 | 1077 | 147 | 1 | 1 | 1077 | 1 | 1075 | 0.0e+00 | 1843.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065873.t1 | G7JRR9 | 99.6 | 1077 | 4 | 0 | 1 | 1077 | 1 | 1077 | 0.0e+00 | 2116.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052372 | MS.gene065873 | 0.974402 | 4.31E-138 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065873.t1 | MTR_4g077660 | 99.629 | 1077 | 4 | 0 | 1 | 1077 | 1 | 1077 | 0.0 | 2230 |
| MS.gene065873.t1 | MTR_5g007790 | 91.558 | 1078 | 90 | 1 | 1 | 1077 | 1 | 1078 | 0.0 | 2040 |
| MS.gene065873.t1 | MTR_8g013700 | 65.767 | 1037 | 243 | 11 | 1 | 1031 | 1 | 931 | 0.0 | 1303 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065873.t1 | AT5G17020 | 86.165 | 1077 | 147 | 1 | 1 | 1077 | 1 | 1075 | 0.0 | 1941 |
| MS.gene065873.t1 | AT5G17020 | 84.773 | 1077 | 147 | 2 | 1 | 1077 | 1 | 1060 | 0.0 | 1900 |
| MS.gene065873.t1 | AT3G03110 | 82.823 | 1077 | 184 | 1 | 1 | 1077 | 1 | 1076 | 0.0 | 1855 |
Find 212 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAATAGTCCATTAACAAAT+TGG | 0.194943 | 4.4:-74591052 | None:intergenic |
| ACAAGTGTTGCATCTTCTTT+AGG | 0.217241 | 4.4:+74588869 | MS.gene065873:CDS |
| TGATGTTCTTGTTCAATATA+AGG | 0.232496 | 4.4:+74584984 | MS.gene065873:CDS |
| CTCATAGTTGAAGATGAAAA+TGG | 0.234394 | 4.4:+74584931 | MS.gene065873:CDS |
| GAATATAACAACTTTGCTTT+TGG | 0.253627 | 4.4:+74583924 | MS.gene065873:CDS |
| TGTTTACTATTGTAGCAAAA+AGG | 0.257518 | 4.4:-74589399 | None:intergenic |
| CAGGTGGCATCCCTTCAATT+TGG | 0.261199 | 4.4:+74583275 | MS.gene065873:intron |
| GTATCAGGAAATCTCGTATA+TGG | 0.269276 | 4.4:-74591106 | None:intergenic |
| AGCAAGCAAAAGACCTGATT+TGG | 0.273590 | 4.4:-74588147 | None:intergenic |
| ACCAATGATGGATCCTGTTT+TGG | 0.280550 | 4.4:+74589327 | MS.gene065873:CDS |
| TATTCTCTTGAGTGGATTCC+AGG | 0.283589 | 4.4:-74583906 | None:intergenic |
| TAAATTGATCGAGACATTCT+TGG | 0.284312 | 4.4:+74589261 | MS.gene065873:CDS |
| CAGGTTACCCAATTTGTTAA+TGG | 0.289036 | 4.4:+74591044 | MS.gene065873:intron |
| CAAAGAATGCTTTCTATTCC+AGG | 0.320623 | 4.4:+74591528 | MS.gene065873:CDS |
| CATCTCCGACATCATTGTTC+AGG | 0.324705 | 4.4:+74581284 | MS.gene065873:CDS |
| CAAGTGTTGCATCTTCTTTA+GGG | 0.333806 | 4.4:+74588870 | MS.gene065873:CDS |
| CACGTATCAGCTCAGCCCTT+TGG | 0.340622 | 4.4:-74582962 | None:intergenic |
| CAGGTATCGGCAATGCTTCC+TGG | 0.341710 | 4.4:+74584796 | MS.gene065873:intron |
| GGAGATGCTGAAGAAGTTTC+AGG | 0.344422 | 4.4:+74590356 | MS.gene065873:CDS |
| TGCGAACTTGATGGGACTTC+AGG | 0.345750 | 4.4:+74584162 | MS.gene065873:CDS |
| AATAGGTCTGTTTGGACTAC+TGG | 0.348346 | 4.4:+74584080 | MS.gene065873:intron |
| AGGTGGCATCCCTTCAATTT+GGG | 0.357467 | 4.4:+74583276 | MS.gene065873:intron |
| GTTTGAGCCACATCGAAGTT+TGG | 0.357770 | 4.4:+74584123 | MS.gene065873:CDS |
| TTGAAAATAATAGGTCTGTT+TGG | 0.359269 | 4.4:+74584072 | MS.gene065873:intron |
| AATACACTCTGCTGGGCAAT+TGG | 0.360947 | 4.4:+74585655 | MS.gene065873:CDS |
| ACGTATCAGCTCAGCCCTTT+GGG | 0.361354 | 4.4:-74582961 | None:intergenic |
| CATTGCATGCCTTCTTATCA+TGG | 0.362756 | 4.4:+74582997 | MS.gene065873:CDS |
| GTGTGCTAACTGAGCCCCTT+TGG | 0.363467 | 4.4:+74590846 | MS.gene065873:CDS |
| TTGACCTTTCAGCTGGAAAC+TGG | 0.366423 | 4.4:+74590824 | MS.gene065873:intron |
| GACTGTGCTTAATATATTGC+AGG | 0.367551 | 4.4:+74588352 | MS.gene065873:CDS |
| TCAGCAATTGAAGCTTGTTA+TGG | 0.371534 | 4.4:+74590266 | MS.gene065873:intron |
| ATTCAATCATGTGGGCATTT+CGG | 0.372536 | 4.4:+74590289 | MS.gene065873:CDS |
| TATATTCATGGGCCAATTGC+AGG | 0.373962 | 4.4:+74583334 | MS.gene065873:CDS |
| CAGAAATGGATGGAAATTAT+AGG | 0.375812 | 4.4:+74588281 | MS.gene065873:intron |
| AGATTTCGATATGCTGGAAC+TGG | 0.377398 | 4.4:-74583160 | None:intergenic |
| TTCGATGCAGTTCGGTTAAG+AGG | 0.380505 | 4.4:+74589230 | MS.gene065873:intron |
| ACCTCAGCTGTTGTCATGTT+CGG | 0.382138 | 4.4:-74590953 | None:intergenic |
| TTCTTATCATGGATCCCCTT+GGG | 0.383666 | 4.4:+74583008 | MS.gene065873:CDS |
| GCTCAACATTATATTAGTTC+AGG | 0.386914 | 4.4:+74581474 | MS.gene065873:CDS |
| ATAAAGCTTCGCCATCTTGC+TGG | 0.392745 | 4.4:-74581667 | None:intergenic |
| GAGGGAGACTCTTATTTACT+TGG | 0.392816 | 4.4:+74585181 | MS.gene065873:CDS |
| TCAACTATGAGAACCTCTTC+GGG | 0.394916 | 4.4:-74584919 | None:intergenic |
| GAAAGGAATATTGCTGAAAC+AGG | 0.395957 | 4.4:+74590318 | MS.gene065873:CDS |
| AAGGCGTAATTAAATATAGA+TGG | 0.397062 | 4.4:+74581220 | MS.gene065873:CDS |
| ACAATTTGTGCCACCAATGA+TGG | 0.397908 | 4.4:+74589315 | MS.gene065873:CDS |
| CAAGATGTATGGTATATTCA+TGG | 0.397963 | 4.4:+74583322 | MS.gene065873:CDS |
| AAGAACATCATTGTCCTTCA+AGG | 0.398870 | 4.4:-74584971 | None:intergenic |
| ATGACTTGAAGCCACATATC+AGG | 0.399612 | 4.4:-74580199 | None:intergenic |
| CAGTACCTGCTCTTCTATCA+TGG | 0.400683 | 4.4:-74585692 | None:intergenic |
| TTCAACTATGAGAACCTCTT+CGG | 0.400992 | 4.4:-74584920 | None:intergenic |
| TTTGTATCTGAACTTCTATC+AGG | 0.404322 | 4.4:+74587884 | MS.gene065873:CDS |
| AAGAACTTAAGCCGGTGCTC+AGG | 0.405513 | 4.4:-74590048 | None:intergenic |
| TGTGCTAACTGAGCCCCTTT+GGG | 0.407002 | 4.4:+74590847 | MS.gene065873:CDS |
| TGTTTACTTGACAGATTATG+AGG | 0.407197 | 4.4:+74585162 | MS.gene065873:intron |
| ATGCTTCCTGGTATGGTTGA+TGG | 0.407442 | 4.4:+74584808 | MS.gene065873:CDS |
| TGGGCAATTGGATCTATATC+TGG | 0.409569 | 4.4:+74585667 | MS.gene065873:CDS |
| TGAGACACATCCTGGAGTTC+AGG | 0.412850 | 4.4:+74586701 | MS.gene065873:CDS |
| ATCTCGCTGCTCGGCAGGTA+AGG | 0.415514 | 4.4:-74581247 | None:intergenic |
| CTTCTTATCATGGATCCCCT+TGG | 0.418863 | 4.4:+74583007 | MS.gene065873:CDS |
| TGCAGCTTCTGCGAACTTGA+TGG | 0.419691 | 4.4:+74584153 | MS.gene065873:CDS |
| CTTAGATCCAGTGCCGTAGA+AGG | 0.421045 | 4.4:-74579810 | None:intergenic |
| GATCCAAACACACCTGCAAT+TGG | 0.423360 | 4.4:-74583346 | None:intergenic |
| TTAGCCGCTGCGACAAGATC+AGG | 0.425401 | 4.4:-74581691 | None:intergenic |
| TGAAGGATCAAGATGTAATA+CGG | 0.426213 | 4.4:+74588330 | MS.gene065873:CDS |
| CTAGCATAATCTCCCAAAAC+AGG | 0.427313 | 4.4:-74589340 | None:intergenic |
| TTGCCATGTGCATATGCCTC+GGG | 0.433269 | 4.4:-74583502 | None:intergenic |
| GAGTGTATTCAAATTGTTCC+AGG | 0.433903 | 4.4:-74585641 | None:intergenic |
| ACTGATCTGTTTGTCAAGCC+AGG | 0.438397 | 4.4:+74590110 | MS.gene065873:CDS |
| TGAATTTCTTCAGCGGTTGA+TGG | 0.438441 | 4.4:+74588119 | MS.gene065873:CDS |
| TCTTTCACTCAGGTTCTTGA+AGG | 0.445088 | 4.4:+74581201 | MS.gene065873:intron |
| GTTGATGGAGCTCCCAAATC+AGG | 0.445324 | 4.4:+74588134 | MS.gene065873:CDS |
| AAATAGTCCATTAACAAATT+GGG | 0.445619 | 4.4:-74591051 | None:intergenic |
| TCAAGATCTGCAATAGTGAT+TGG | 0.450448 | 4.4:-74587911 | None:intergenic |
| AGCTTAAACAATCATTGAAC+AGG | 0.451004 | 4.4:+74581889 | MS.gene065873:CDS |
| ATCGGCAATGCTTCCTGGTA+TGG | 0.453160 | 4.4:+74584801 | MS.gene065873:CDS |
| AGATGAAATGGTGGACTCAT+AGG | 0.454147 | 4.4:+74591575 | MS.gene065873:CDS |
| GATCGAGACATTCTTGGATA+AGG | 0.455063 | 4.4:+74589267 | MS.gene065873:CDS |
| GCATCTCCAACAACAGGTTC+AGG | 0.456467 | 4.4:-74590341 | None:intergenic |
| ACAATTTGAATACACTCTGC+TGG | 0.457803 | 4.4:+74585647 | MS.gene065873:CDS |
| ACCTCAGATTCCCTTGCATC+AGG | 0.459982 | 4.4:-74589370 | None:intergenic |
| TTTCATCTTGCAACTCGATA+GGG | 0.460559 | 4.4:-74591560 | None:intergenic |
| TGCTTCCTGGTATGGTTGAT+GGG | 0.462235 | 4.4:+74584809 | MS.gene065873:CDS |
| TCTTCAGCATCTCCAACAAC+AGG | 0.463831 | 4.4:-74590347 | None:intergenic |
| TCGATAGGGGCAATCAGCCC+TGG | 0.464759 | 4.4:-74591546 | None:intergenic |
| ATTTGTGTTAGGCGGCAGTA+TGG | 0.464788 | 4.4:-74583476 | None:intergenic |
| TATCGAGTTGCAAGATGAAA+TGG | 0.464848 | 4.4:+74591563 | MS.gene065873:CDS |
| ATTCCATCTCGCTGCTCGGC+AGG | 0.465981 | 4.4:-74581252 | None:intergenic |
| GCCACCGTCGCCGCCTTCTA+CGG | 0.469747 | 4.4:+74579797 | MS.gene065873:CDS |
| TTTATGCATGAGACACATCC+TGG | 0.470454 | 4.4:+74586693 | MS.gene065873:CDS |
| AACAGGCCTGAACCTGTTGT+TGG | 0.470757 | 4.4:+74590335 | MS.gene065873:CDS |
| CCCAAAACAGGATCCATCAT+TGG | 0.476317 | 4.4:-74589328 | None:intergenic |
| CAACCTTTCCGTTCGAAATG+AGG | 0.482971 | 4.4:-74581440 | None:intergenic |
| GCTGAAGATCAACCACAGAT+TGG | 0.484039 | 4.4:+74589289 | MS.gene065873:CDS |
| ATTTCATCTTGCAACTCGAT+AGG | 0.485254 | 4.4:-74591561 | None:intergenic |
| GCAAGCAAAAGACCTGATTT+GGG | 0.487434 | 4.4:-74588146 | None:intergenic |
| CATTGTCCTTCAAGGTTTCA+CGG | 0.489746 | 4.4:-74584963 | None:intergenic |
| GCAGGTTCACATCCGCATCC+TGG | 0.490283 | 4.4:+74583888 | MS.gene065873:intron |
| TTTGGACTACTGGAATTCCT+TGG | 0.490547 | 4.4:+74584090 | MS.gene065873:CDS |
| GCCTCGGGGATATTTGTGTT+AGG | 0.490648 | 4.4:-74583487 | None:intergenic |
| AAGGCATACAGATTCGTAGA+AGG | 0.492583 | 4.4:-74587951 | None:intergenic |
| AGTTCTGTAATCAGTTCTAC+AGG | 0.497293 | 4.4:+74590619 | MS.gene065873:CDS |
| GCAGCTTCTGCGAACTTGAT+GGG | 0.497457 | 4.4:+74584154 | MS.gene065873:CDS |
| TGGGTTCAAATTACATGTCC+TGG | 0.499157 | 4.4:+74590704 | MS.gene065873:CDS |
| AGCGTAAGATTTCGATATGC+TGG | 0.500147 | 4.4:-74583166 | None:intergenic |
| CATCTTATGTGAAACTTCTA+CGG | 0.502876 | 4.4:+74589137 | MS.gene065873:CDS |
| TCGCTTGATAGGTATGTTGT+TGG | 0.504977 | 4.4:+74586603 | MS.gene065873:intron |
| TCATAGTTGAAGATGAAAAT+GGG | 0.505293 | 4.4:+74584932 | MS.gene065873:CDS |
| TATCAGGAAATCTCGTATAT+GGG | 0.506963 | 4.4:-74591105 | None:intergenic |
| AACAACTCAGTGGTGAGGAT+TGG | 0.507258 | 4.4:+74585617 | MS.gene065873:CDS |
| AAATGCTGATAAGATATTCA+AGG | 0.507542 | 4.4:-74583948 | None:intergenic |
| CAACGTCGTCAGCTTTATGC+TGG | 0.507554 | 4.4:+74584850 | MS.gene065873:CDS |
| AGATCATTGTGATTTGAGGC+AGG | 0.510406 | 4.4:-74588901 | None:intergenic |
| AGTTGTTATATTCTCTTGAG+TGG | 0.513869 | 4.4:-74583914 | None:intergenic |
| CCTGGTATGGTTGATGGGCA+CGG | 0.514902 | 4.4:+74584814 | MS.gene065873:CDS |
| CCATGATGATACTGAAAAGC+AGG | 0.516021 | 4.4:+74585214 | MS.gene065873:CDS |
| TGGACATGTTGAATGTGTAC+AGG | 0.517694 | 4.4:+74588927 | MS.gene065873:CDS |
| GTCGCCGCCTTCTACGGCAC+TGG | 0.520083 | 4.4:+74579803 | MS.gene065873:CDS |
| ATGAGGTGAAGAACAGCGCC+AGG | 0.521707 | 4.4:-74583636 | None:intergenic |
| CTGAGCTTCTCAGCGGCCAT+CGG | 0.521732 | 4.4:-74579737 | None:intergenic |
| ATCAAGTTCGCAGAAGCTGC+AGG | 0.523514 | 4.4:-74584151 | None:intergenic |
| TGTGCTATCGGCATCCCAAA+GGG | 0.529449 | 4.4:+74582947 | MS.gene065873:CDS |
| CAAAGATCTCTATGCTGAAG+AGG | 0.531854 | 4.4:+74591479 | MS.gene065873:CDS |
| GCCGTAGAAGGCGGCGACGG+TGG | 0.532551 | 4.4:-74579798 | None:intergenic |
| TATTGTCCGTGAAACCTTGA+AGG | 0.534873 | 4.4:+74584957 | MS.gene065873:CDS |
| TGGTTCCATGATAGAAGAGC+AGG | 0.535654 | 4.4:+74585687 | MS.gene065873:CDS |
| CAAGGGGATCCATGATAAGA+AGG | 0.538201 | 4.4:-74583006 | None:intergenic |
| GAAGAGAGAAGAACTTAAGC+CGG | 0.538221 | 4.4:-74590056 | None:intergenic |
| ACTTGTAGCAACATCCCAAA+GGG | 0.539515 | 4.4:-74590861 | None:intergenic |
| GATAGAAGTTCAGATACAAA+TGG | 0.542603 | 4.4:-74587881 | None:intergenic |
| GACTTGTAGCAACATCCCAA+AGG | 0.543415 | 4.4:-74590862 | None:intergenic |
| TTAGGCATTTATACAGAACC+TGG | 0.546070 | 4.4:+74583618 | MS.gene065873:intron |
| AGCATTCTCAACTTTGACAT+GGG | 0.546626 | 4.4:-74584874 | None:intergenic |
| GGGCATTTCGGCACACAGAA+AGG | 0.547271 | 4.4:+74590301 | MS.gene065873:CDS |
| TTTCATTCCATCTCGCTGCT+CGG | 0.547958 | 4.4:-74581256 | None:intergenic |
| CAATTTGAATACACTCTGCT+GGG | 0.548023 | 4.4:+74585648 | MS.gene065873:CDS |
| CCGTGCCCATCAACCATACC+AGG | 0.548181 | 4.4:-74584814 | None:intergenic |
| ATGGATGGAAATTATAGGCC+AGG | 0.548256 | 4.4:+74588286 | MS.gene065873:CDS |
| CTAGGAATGCTCCTGATGCA+AGG | 0.552257 | 4.4:+74589359 | MS.gene065873:CDS |
| AAGATGTATGGTATATTCAT+GGG | 0.555548 | 4.4:+74583323 | MS.gene065873:CDS |
| TCGATGCAGTTCGGTTAAGA+GGG | 0.559242 | 4.4:+74589231 | MS.gene065873:intron |
| TTGAAGATTACCCTGAGCAC+CGG | 0.559648 | 4.4:+74590037 | MS.gene065873:CDS |
| GTGCAATATGTCAAGATGTA+TGG | 0.559915 | 4.4:+74583311 | MS.gene065873:CDS |
| TGCAAAACAATCCTGATATG+TGG | 0.562075 | 4.4:+74580188 | MS.gene065873:CDS |
| CTACTGGAATTCCTTGGTGT+CGG | 0.563467 | 4.4:+74584096 | MS.gene065873:CDS |
| CTTGACAAACAGATCAGTGC+AGG | 0.563746 | 4.4:-74590105 | None:intergenic |
| CCCAGGCTTATGAAAAGTAT+CGG | 0.564406 | 4.4:-74590685 | None:intergenic |
| TCGAGTAACGGAACATCGAT+CGG | 0.565699 | 4.4:-74579773 | None:intergenic |
| AGGAAAACAATGAGTAGCTA+TGG | 0.566018 | 4.4:-74590085 | None:intergenic |
| GATCTGCAATAGTGATTGGA+AGG | 0.567155 | 4.4:-74587907 | None:intergenic |
| GCGACGGTGGCGTCGAGTAA+CGG | 0.567435 | 4.4:-74579785 | None:intergenic |
| TTCATCTTGCAACTCGATAG+GGG | 0.569366 | 4.4:-74591559 | None:intergenic |
| AAAGAATGCTTTCTATTCCA+GGG | 0.571488 | 4.4:+74591529 | MS.gene065873:CDS |
| CTTGAGTGGATTCCAGGATG+CGG | 0.572251 | 4.4:-74583900 | None:intergenic |
| TTATATATTTGAATCACCGT+TGG | 0.573963 | 4.4:+74583031 | MS.gene065873:CDS |
| GTTATGCTTATATGTGCTAT+CGG | 0.574920 | 4.4:+74582935 | MS.gene065873:CDS |
| TTACCTGCCGAGCAGCGAGA+TGG | 0.576301 | 4.4:+74581249 | MS.gene065873:CDS |
| AGAACTTAAGCCGGTGCTCA+GGG | 0.577552 | 4.4:-74590047 | None:intergenic |
| AGCATGAGTGGCCAGCAAGA+TGG | 0.577675 | 4.4:+74581656 | MS.gene065873:CDS |
| GTAGAAGGAGTGTATCTGAT+GGG | 0.578468 | 4.4:-74587936 | None:intergenic |
| ATTGCCATGTGCATATGCCT+CGG | 0.578592 | 4.4:-74583503 | None:intergenic |
| TCTCTATGCTGAAGAGGCTG+CGG | 0.580599 | 4.4:+74591485 | MS.gene065873:CDS |
| TCCTGATGCAAGGGAATCTG+AGG | 0.583164 | 4.4:+74589369 | MS.gene065873:CDS |
| TTGTTATGGATTCAATCATG+TGG | 0.583890 | 4.4:+74590280 | MS.gene065873:CDS |
| ATGTGCTATCGGCATCCCAA+AGG | 0.587524 | 4.4:+74582946 | MS.gene065873:CDS |
| AAAACAAATGCTGAAGCACC+AGG | 0.588693 | 4.4:-74590722 | None:intergenic |
| CGTAGAAGGAGTGTATCTGA+TGG | 0.588720 | 4.4:-74587937 | None:intergenic |
| TGATTCAAATATATAACCCA+AGG | 0.590786 | 4.4:-74583024 | None:intergenic |
| CGTGTAATCTGCAGATGCTG+AGG | 0.591084 | 4.4:+74585584 | MS.gene065873:intron |
| AAGCATTCTCAACTTTGACA+TGG | 0.596752 | 4.4:-74584875 | None:intergenic |
| AGGCCTCATTTCGAACGGAA+AGG | 0.600634 | 4.4:+74581437 | MS.gene065873:CDS |
| TAGGAATGCTCCTGATGCAA+GGG | 0.607736 | 4.4:+74589360 | MS.gene065873:CDS |
| TGTTATGGATTCAATCATGT+GGG | 0.609757 | 4.4:+74590281 | MS.gene065873:CDS |
| AGTGCCGTAGAAGGCGGCGA+CGG | 0.612587 | 4.4:-74579801 | None:intergenic |
| GTTTACTTGACAGATTATGA+GGG | 0.612625 | 4.4:+74585163 | MS.gene065873:intron |
| TCGGGGATATTTGTGTTAGG+CGG | 0.615711 | 4.4:-74583484 | None:intergenic |
| CGGCTCAGAGAGAAAGAGAA+CGG | 0.616816 | 4.4:+74591505 | MS.gene065873:CDS |
| GATTCAAATATATAACCCAA+GGG | 0.617377 | 4.4:-74583023 | None:intergenic |
| GGCATGCAATGTAGATAGTG+TGG | 0.618242 | 4.4:-74582985 | None:intergenic |
| GATTTCGATATGCTGGAACT+GGG | 0.620969 | 4.4:-74583159 | None:intergenic |
| ATCCCCGAGGCATATGCACA+TGG | 0.622830 | 4.4:+74583499 | MS.gene065873:CDS |
| AATCTATGTGAAATCACGAA+GGG | 0.623585 | 4.4:+74586470 | MS.gene065873:CDS |
| AACAATGAGTAGCTATGGCG+CGG | 0.631317 | 4.4:-74590080 | None:intergenic |
| AGAGAGATGAATTTCTTCAG+CGG | 0.635384 | 4.4:+74588112 | MS.gene065873:CDS |
| AAAACAGGATCCATCATTGG+TGG | 0.638516 | 4.4:-74589325 | None:intergenic |
| AATGCTTATGATCTGTCGAA+TGG | 0.640679 | 4.4:+74584891 | MS.gene065873:CDS |
| AGATCCAGTGCCGTAGAAGG+CGG | 0.642341 | 4.4:-74579807 | None:intergenic |
| AAGTAAACAACTCAGTGGTG+AGG | 0.642832 | 4.4:+74585612 | MS.gene065873:CDS |
| TAATACCTGAACAATGATGT+CGG | 0.643354 | 4.4:-74581289 | None:intergenic |
| CAACGAGGCCTCATTTCGAA+CGG | 0.643519 | 4.4:+74581432 | MS.gene065873:CDS |
| TATTCCTGATCTTGTCGCAG+CGG | 0.643593 | 4.4:+74581687 | MS.gene065873:CDS |
| TCCGAACATGACAACAGCTG+AGG | 0.645401 | 4.4:+74590952 | MS.gene065873:CDS |
| TCGAATGGCTAAACCCGAAG+AGG | 0.647046 | 4.4:+74584906 | MS.gene065873:CDS |
| AGGACATGTAATTTGAACCC+AGG | 0.648020 | 4.4:-74590702 | None:intergenic |
| GCATTACTTGGGTATGACTG+TGG | 0.648596 | 4.4:-74590884 | None:intergenic |
| CGGCACTGGATCTAAGCAAG+AGG | 0.649693 | 4.4:+74579817 | MS.gene065873:CDS |
| TCAGTGGTGAGGATTGGACC+TGG | 0.651890 | 4.4:+74585623 | MS.gene065873:CDS |
| CTCAAACAGCTCCGACACCA+AGG | 0.652968 | 4.4:-74584107 | None:intergenic |
| AAATCTATGTGAAATCACGA+AGG | 0.654119 | 4.4:+74586469 | MS.gene065873:CDS |
| CGAGTTGCAAGATGAAATGG+TGG | 0.657463 | 4.4:+74591566 | MS.gene065873:CDS |
| TAGAAGGAGTGTATCTGATG+GGG | 0.661038 | 4.4:-74587935 | None:intergenic |
| TACGCTGCAATGTTTAACAG+AGG | 0.663731 | 4.4:+74583183 | MS.gene065873:CDS |
| TGCATAGCTTTCTAGCAACG+AGG | 0.670460 | 4.4:+74581417 | MS.gene065873:intron |
| TGCCATGTGCATATGCCTCG+GGG | 0.678438 | 4.4:-74583501 | None:intergenic |
| AACGATCTGTGAGAATTGCA+TGG | 0.684162 | 4.4:+74581723 | MS.gene065873:CDS |
| GCGTAAGTTTGTGATCACCC+AGG | 0.698935 | 4.4:+74587756 | MS.gene065873:CDS |
| GGATTATCCAAACTTCGATG+TGG | 0.699508 | 4.4:-74584130 | None:intergenic |
| ATTCAAATATATAACCCAAG+GGG | 0.700367 | 4.4:-74583022 | None:intergenic |
| AAAACGGCTTCAAATATGCG+AGG | 0.702127 | 4.4:-74589614 | None:intergenic |
| AAATTAAGTAAACAACTCAG+TGG | 0.731890 | 4.4:+74585607 | MS.gene065873:CDS |
| CTTGTAGCAACATCCCAAAG+GGG | 0.739875 | 4.4:-74590860 | None:intergenic |
| GCCTAACACAAATATCCCCG+AGG | 0.742982 | 4.4:+74583486 | MS.gene065873:CDS |
| CAAATCTCTGAGCTTCTCAG+CGG | 0.769266 | 4.4:-74579744 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 74579740 | 74591596 | 74579740 | ID=MS.gene065873 |
| chr4.4 | mRNA | 74579740 | 74591596 | 74579740 | ID=MS.gene065873.t1;Parent=MS.gene065873 |
| chr4.4 | exon | 74579740 | 74579838 | 74579740 | ID=MS.gene065873.t1.exon1;Parent=MS.gene065873.t1 |
| chr4.4 | CDS | 74579740 | 74579838 | 74579740 | ID=cds.MS.gene065873.t1;Parent=MS.gene065873.t1 |
| chr4.4 | exon | 74580157 | 74580273 | 74580157 | ID=MS.gene065873.t1.exon2;Parent=MS.gene065873.t1 |
| chr4.4 | CDS | 74580157 | 74580273 | 74580157 | ID=cds.MS.gene065873.t1;Parent=MS.gene065873.t1 |
| chr4.4 | exon | 74581213 | 74581305 | 74581213 | ID=MS.gene065873.t1.exon3;Parent=MS.gene065873.t1 |
| chr4.4 | CDS | 74581213 | 74581305 | 74581213 | ID=cds.MS.gene065873.t1;Parent=MS.gene065873.t1 |
| chr4.4 | exon | 74581424 | 74581495 | 74581424 | ID=MS.gene065873.t1.exon4;Parent=MS.gene065873.t1 |
| chr4.4 | CDS | 74581424 | 74581495 | 74581424 | ID=cds.MS.gene065873.t1;Parent=MS.gene065873.t1 |
| chr4.4 | exon | 74581649 | 74581756 | 74581649 | ID=MS.gene065873.t1.exon5;Parent=MS.gene065873.t1 |
| chr4.4 | CDS | 74581649 | 74581756 | 74581649 | ID=cds.MS.gene065873.t1;Parent=MS.gene065873.t1 |
| chr4.4 | exon | 74581828 | 74581910 | 74581828 | ID=MS.gene065873.t1.exon6;Parent=MS.gene065873.t1 |
| chr4.4 | CDS | 74581828 | 74581910 | 74581828 | ID=cds.MS.gene065873.t1;Parent=MS.gene065873.t1 |
| chr4.4 | exon | 74582914 | 74583052 | 74582914 | ID=MS.gene065873.t1.exon7;Parent=MS.gene065873.t1 |
| chr4.4 | CDS | 74582914 | 74583052 | 74582914 | ID=cds.MS.gene065873.t1;Parent=MS.gene065873.t1 |
| chr4.4 | exon | 74583136 | 74583204 | 74583136 | ID=MS.gene065873.t1.exon8;Parent=MS.gene065873.t1 |
| chr4.4 | CDS | 74583136 | 74583204 | 74583136 | ID=cds.MS.gene065873.t1;Parent=MS.gene065873.t1 |
| chr4.4 | exon | 74583278 | 74583355 | 74583278 | ID=MS.gene065873.t1.exon9;Parent=MS.gene065873.t1 |
| chr4.4 | CDS | 74583278 | 74583355 | 74583278 | ID=cds.MS.gene065873.t1;Parent=MS.gene065873.t1 |
| chr4.4 | exon | 74583475 | 74583537 | 74583475 | ID=MS.gene065873.t1.exon10;Parent=MS.gene065873.t1 |
| chr4.4 | CDS | 74583475 | 74583537 | 74583475 | ID=cds.MS.gene065873.t1;Parent=MS.gene065873.t1 |
| chr4.4 | exon | 74583622 | 74583666 | 74583622 | ID=MS.gene065873.t1.exon11;Parent=MS.gene065873.t1 |
| chr4.4 | CDS | 74583622 | 74583666 | 74583622 | ID=cds.MS.gene065873.t1;Parent=MS.gene065873.t1 |
| chr4.4 | exon | 74583892 | 74583999 | 74583892 | ID=MS.gene065873.t1.exon12;Parent=MS.gene065873.t1 |
| chr4.4 | CDS | 74583892 | 74583999 | 74583892 | ID=cds.MS.gene065873.t1;Parent=MS.gene065873.t1 |
| chr4.4 | exon | 74584085 | 74584183 | 74584085 | ID=MS.gene065873.t1.exon13;Parent=MS.gene065873.t1 |
| chr4.4 | CDS | 74584085 | 74584183 | 74584085 | ID=cds.MS.gene065873.t1;Parent=MS.gene065873.t1 |
| chr4.4 | exon | 74584799 | 74585005 | 74584799 | ID=MS.gene065873.t1.exon14;Parent=MS.gene065873.t1 |
| chr4.4 | CDS | 74584799 | 74585005 | 74584799 | ID=cds.MS.gene065873.t1;Parent=MS.gene065873.t1 |
| chr4.4 | exon | 74585176 | 74585235 | 74585176 | ID=MS.gene065873.t1.exon15;Parent=MS.gene065873.t1 |
| chr4.4 | CDS | 74585176 | 74585235 | 74585176 | ID=cds.MS.gene065873.t1;Parent=MS.gene065873.t1 |
| chr4.4 | exon | 74585598 | 74585708 | 74585598 | ID=MS.gene065873.t1.exon16;Parent=MS.gene065873.t1 |
| chr4.4 | CDS | 74585598 | 74585708 | 74585598 | ID=cds.MS.gene065873.t1;Parent=MS.gene065873.t1 |
| chr4.4 | exon | 74586431 | 74586528 | 74586431 | ID=MS.gene065873.t1.exon17;Parent=MS.gene065873.t1 |
| chr4.4 | CDS | 74586431 | 74586528 | 74586431 | ID=cds.MS.gene065873.t1;Parent=MS.gene065873.t1 |
| chr4.4 | exon | 74586614 | 74586722 | 74586614 | ID=MS.gene065873.t1.exon18;Parent=MS.gene065873.t1 |
| chr4.4 | CDS | 74586614 | 74586722 | 74586614 | ID=cds.MS.gene065873.t1;Parent=MS.gene065873.t1 |
| chr4.4 | exon | 74587712 | 74587777 | 74587712 | ID=MS.gene065873.t1.exon19;Parent=MS.gene065873.t1 |
| chr4.4 | CDS | 74587712 | 74587777 | 74587712 | ID=cds.MS.gene065873.t1;Parent=MS.gene065873.t1 |
| chr4.4 | exon | 74587866 | 74587964 | 74587866 | ID=MS.gene065873.t1.exon20;Parent=MS.gene065873.t1 |
| chr4.4 | CDS | 74587866 | 74587964 | 74587866 | ID=cds.MS.gene065873.t1;Parent=MS.gene065873.t1 |
| chr4.4 | exon | 74588075 | 74588155 | 74588075 | ID=MS.gene065873.t1.exon21;Parent=MS.gene065873.t1 |
| chr4.4 | CDS | 74588075 | 74588155 | 74588075 | ID=cds.MS.gene065873.t1;Parent=MS.gene065873.t1 |
| chr4.4 | exon | 74588284 | 74588373 | 74588284 | ID=MS.gene065873.t1.exon22;Parent=MS.gene065873.t1 |
| chr4.4 | CDS | 74588284 | 74588373 | 74588284 | ID=cds.MS.gene065873.t1;Parent=MS.gene065873.t1 |
| chr4.4 | exon | 74588863 | 74588948 | 74588863 | ID=MS.gene065873.t1.exon23;Parent=MS.gene065873.t1 |
| chr4.4 | CDS | 74588863 | 74588948 | 74588863 | ID=cds.MS.gene065873.t1;Parent=MS.gene065873.t1 |
| chr4.4 | exon | 74589078 | 74589158 | 74589078 | ID=MS.gene065873.t1.exon24;Parent=MS.gene065873.t1 |
| chr4.4 | CDS | 74589078 | 74589158 | 74589078 | ID=cds.MS.gene065873.t1;Parent=MS.gene065873.t1 |
| chr4.4 | exon | 74589240 | 74589422 | 74589240 | ID=MS.gene065873.t1.exon25;Parent=MS.gene065873.t1 |
| chr4.4 | CDS | 74589240 | 74589422 | 74589240 | ID=cds.MS.gene065873.t1;Parent=MS.gene065873.t1 |
| chr4.4 | exon | 74589586 | 74589652 | 74589586 | ID=MS.gene065873.t1.exon26;Parent=MS.gene065873.t1 |
| chr4.4 | CDS | 74589586 | 74589652 | 74589586 | ID=cds.MS.gene065873.t1;Parent=MS.gene065873.t1 |
| chr4.4 | exon | 74590021 | 74590131 | 74590021 | ID=MS.gene065873.t1.exon27;Parent=MS.gene065873.t1 |
| chr4.4 | CDS | 74590021 | 74590131 | 74590021 | ID=cds.MS.gene065873.t1;Parent=MS.gene065873.t1 |
| chr4.4 | exon | 74590270 | 74590377 | 74590270 | ID=MS.gene065873.t1.exon28;Parent=MS.gene065873.t1 |
| chr4.4 | CDS | 74590270 | 74590377 | 74590270 | ID=cds.MS.gene065873.t1;Parent=MS.gene065873.t1 |
| chr4.4 | exon | 74590612 | 74590749 | 74590612 | ID=MS.gene065873.t1.exon29;Parent=MS.gene065873.t1 |
| chr4.4 | CDS | 74590612 | 74590749 | 74590612 | ID=cds.MS.gene065873.t1;Parent=MS.gene065873.t1 |
| chr4.4 | exon | 74590836 | 74590973 | 74590836 | ID=MS.gene065873.t1.exon30;Parent=MS.gene065873.t1 |
| chr4.4 | CDS | 74590836 | 74590973 | 74590836 | ID=cds.MS.gene065873.t1;Parent=MS.gene065873.t1 |
| chr4.4 | exon | 74591047 | 74591151 | 74591047 | ID=MS.gene065873.t1.exon31;Parent=MS.gene065873.t1 |
| chr4.4 | CDS | 74591047 | 74591151 | 74591047 | ID=cds.MS.gene065873.t1;Parent=MS.gene065873.t1 |
| chr4.4 | exon | 74591474 | 74591596 | 74591474 | ID=MS.gene065873.t1.exon32;Parent=MS.gene065873.t1 |
| chr4.4 | CDS | 74591474 | 74591596 | 74591474 | ID=cds.MS.gene065873.t1;Parent=MS.gene065873.t1 |
| Gene Sequence |
| Protein sequence |
