Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065874.t1 | XP_003607405.2 | 92.7 | 896 | 11 | 3 | 1 | 854 | 1 | 884 | 0.00E+00 | 1607.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065874.t1 | Q9SMV6 | 80.9 | 890 | 114 | 4 | 1 | 848 | 1 | 876 | 0.0e+00 | 1398.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065874.t1 | G7JRR9 | 92.7 | 896 | 11 | 3 | 1 | 854 | 1 | 884 | 0.0e+00 | 1607.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052372 | MS.gene065874 | 0.895834 | 6.57E-76 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065874.t1 | MTR_4g077660 | 93.258 | 890 | 6 | 3 | 1 | 848 | 1 | 878 | 0.0 | 1692 |
| MS.gene065874.t1 | MTR_5g007790 | 86.389 | 889 | 66 | 4 | 1 | 846 | 1 | 877 | 0.0 | 1573 |
| MS.gene065874.t1 | MTR_8g013700 | 60.379 | 896 | 190 | 14 | 1 | 848 | 1 | 779 | 0.0 | 986 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065874.t1 | AT5G17020 | 82.529 | 870 | 111 | 3 | 1 | 843 | 1 | 856 | 0.0 | 1477 |
| MS.gene065874.t1 | AT5G17020 | 81.130 | 885 | 111 | 4 | 1 | 843 | 1 | 871 | 0.0 | 1467 |
| MS.gene065874.t1 | AT3G03110 | 77.978 | 890 | 141 | 4 | 1 | 848 | 1 | 877 | 0.0 | 1402 |
Find 174 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCACAATAGCTTAGGCTTTC+AGG | 0.133291 | 4.2:-32203551 | None:intergenic |
| ACAAGTGTTGCATCTTCTTT+AGG | 0.217241 | 4.2:+32209683 | MS.gene065874:CDS |
| TGATGTTCTTGTTCAATATA+AGG | 0.232496 | 4.2:+32205798 | MS.gene065874:CDS |
| CTCATAGTTGAAGATGAAAA+TGG | 0.234394 | 4.2:+32205745 | MS.gene065874:CDS |
| GAATATAACAACTTTGCTTT+TGG | 0.253627 | 4.2:+32204738 | MS.gene065874:CDS |
| TGTTTACTATTGTAGCAAAA+AGG | 0.257518 | 4.2:-32210212 | None:intergenic |
| CAGGTGGCATCCCTTCAATT+TGG | 0.261199 | 4.2:+32204089 | MS.gene065874:intron |
| AGCAAGCAAAAGACCTGATT+TGG | 0.273590 | 4.2:-32208961 | None:intergenic |
| ACCAATGATGGATCCTGTTT+TGG | 0.280550 | 4.2:+32210140 | MS.gene065874:CDS |
| TATTCTCTTGAGTGGATTCC+AGG | 0.283589 | 4.2:-32204720 | None:intergenic |
| TAAATTGATCGAGACATTCT+TGG | 0.284312 | 4.2:+32210074 | MS.gene065874:CDS |
| CATCTCCGACATCATTGTTC+AGG | 0.324705 | 4.2:+32202098 | MS.gene065874:CDS |
| CAAGTGTTGCATCTTCTTTA+GGG | 0.333806 | 4.2:+32209684 | MS.gene065874:CDS |
| CACGTATCAGCTCAGCCCTT+TGG | 0.340622 | 4.2:-32203776 | None:intergenic |
| CAGGTATCGGCAATGCTTCC+TGG | 0.341710 | 4.2:+32205610 | MS.gene065874:intron |
| TGCGAACTTGATGGGACTTC+AGG | 0.345750 | 4.2:+32204976 | MS.gene065874:CDS |
| AATAGGTCTGTTTGGACTAC+TGG | 0.348346 | 4.2:+32204894 | MS.gene065874:intron |
| ACTGAAACACTGTTGATTCA+TGG | 0.354683 | 4.2:-32210974 | None:intergenic |
| AGGTGGCATCCCTTCAATTT+GGG | 0.357467 | 4.2:+32204090 | MS.gene065874:intron |
| GTTTGAGCCACATCGAAGTT+TGG | 0.357770 | 4.2:+32204937 | MS.gene065874:CDS |
| TTGAAAATAATAGGTCTGTT+TGG | 0.359269 | 4.2:+32204886 | MS.gene065874:intron |
| AATACACTCTGCTGGGCAAT+TGG | 0.360947 | 4.2:+32206469 | MS.gene065874:CDS |
| ACGTATCAGCTCAGCCCTTT+GGG | 0.361354 | 4.2:-32203775 | None:intergenic |
| CATTGCATGCCTTCTTATCA+TGG | 0.362756 | 4.2:+32203811 | MS.gene065874:CDS |
| GACTGTGCTTAATATATTGC+AGG | 0.367551 | 4.2:+32209166 | MS.gene065874:CDS |
| TATATTCATGGGCCAATTGC+AGG | 0.373962 | 4.2:+32204148 | MS.gene065874:CDS |
| CAGAAATGGATGGAAATTAT+AGG | 0.375812 | 4.2:+32209095 | MS.gene065874:intron |
| AGATTTCGATATGCTGGAAC+TGG | 0.377398 | 4.2:-32203974 | None:intergenic |
| TTCGATGCAGTTCGGTTAAG+AGG | 0.380505 | 4.2:+32210043 | MS.gene065874:intron |
| TTCTTATCATGGATCCCCTT+GGG | 0.383666 | 4.2:+32203822 | MS.gene065874:CDS |
| GCTCAACATTATATTAGTTC+AGG | 0.386914 | 4.2:+32202288 | MS.gene065874:CDS |
| ATAAAGCTTCGCCATCTTGC+TGG | 0.392745 | 4.2:-32202481 | None:intergenic |
| GAGGGAGACTCTTATTTACT+TGG | 0.392816 | 4.2:+32205995 | MS.gene065874:CDS |
| TCAACTATGAGAACCTCTTC+GGG | 0.394916 | 4.2:-32205733 | None:intergenic |
| AAGGCGTAATTAAATATAGA+TGG | 0.397062 | 4.2:+32202034 | MS.gene065874:CDS |
| ACAATTTGTGCCACCAATGA+TGG | 0.397908 | 4.2:+32210128 | MS.gene065874:CDS |
| CAAGATGTATGGTATATTCA+TGG | 0.397963 | 4.2:+32204136 | MS.gene065874:CDS |
| AAGAACATCATTGTCCTTCA+AGG | 0.398870 | 4.2:-32205785 | None:intergenic |
| ATGACTTGAAGCCACATATC+AGG | 0.399612 | 4.2:-32201013 | None:intergenic |
| CAGTACCTGCTCTTCTATCA+TGG | 0.400683 | 4.2:-32206506 | None:intergenic |
| TTCAACTATGAGAACCTCTT+CGG | 0.400992 | 4.2:-32205734 | None:intergenic |
| TTTGTATCTGAACTTCTATC+AGG | 0.404322 | 4.2:+32208698 | MS.gene065874:CDS |
| AAGAACTTAAGCCGGTGCTC+AGG | 0.405513 | 4.2:-32210865 | None:intergenic |
| TGTTTACTTGACAGATTATG+AGG | 0.407197 | 4.2:+32205976 | MS.gene065874:intron |
| ATGCTTCCTGGTATGGTTGA+TGG | 0.407442 | 4.2:+32205622 | MS.gene065874:CDS |
| TGGGCAATTGGATCTATATC+TGG | 0.409569 | 4.2:+32206481 | MS.gene065874:CDS |
| TGAGACACATCCTGGAGTTC+AGG | 0.412850 | 4.2:+32207515 | MS.gene065874:CDS |
| ATCTCGCTGCTCGGCAGGTA+AGG | 0.415514 | 4.2:-32202061 | None:intergenic |
| CTTCTTATCATGGATCCCCT+TGG | 0.418863 | 4.2:+32203821 | MS.gene065874:CDS |
| TGCAGCTTCTGCGAACTTGA+TGG | 0.419691 | 4.2:+32204967 | MS.gene065874:CDS |
| CTTAGATCCAGTGCCGTAGA+AGG | 0.421045 | 4.2:-32200624 | None:intergenic |
| GATCCAAACACACCTGCAAT+TGG | 0.423360 | 4.2:-32204160 | None:intergenic |
| TTAGCCGCTGCGACAAGATC+AGG | 0.425401 | 4.2:-32202505 | None:intergenic |
| TGAAGGATCAAGATGTAATA+CGG | 0.426213 | 4.2:+32209144 | MS.gene065874:CDS |
| CTAGCATAATCTCCCAAAAC+AGG | 0.427313 | 4.2:-32210153 | None:intergenic |
| TTGCCATGTGCATATGCCTC+GGG | 0.433269 | 4.2:-32204316 | None:intergenic |
| GAGTGTATTCAAATTGTTCC+AGG | 0.433903 | 4.2:-32206455 | None:intergenic |
| ACTGATCTGTTTGTCAAGCC+AGG | 0.438397 | 4.2:+32210927 | MS.gene065874:CDS |
| TGAATTTCTTCAGCGGTTGA+TGG | 0.438441 | 4.2:+32208933 | MS.gene065874:CDS |
| TCTTTCACTCAGGTTCTTGA+AGG | 0.445088 | 4.2:+32202015 | MS.gene065874:intron |
| GTTGATGGAGCTCCCAAATC+AGG | 0.445324 | 4.2:+32208948 | MS.gene065874:CDS |
| TCAAGATCTGCAATAGTGAT+TGG | 0.450448 | 4.2:-32208725 | None:intergenic |
| AGCTTAAACAATCATTGAAC+AGG | 0.451004 | 4.2:+32202703 | MS.gene065874:CDS |
| ATCGGCAATGCTTCCTGGTA+TGG | 0.453160 | 4.2:+32205615 | MS.gene065874:CDS |
| GATCGAGACATTCTTGGATA+AGG | 0.455063 | 4.2:+32210080 | MS.gene065874:CDS |
| ACAATTTGAATACACTCTGC+TGG | 0.457803 | 4.2:+32206461 | MS.gene065874:CDS |
| ACCTCAGATTCCCTTGCATC+AGG | 0.459982 | 4.2:-32210183 | None:intergenic |
| TGCTTCCTGGTATGGTTGAT+GGG | 0.462235 | 4.2:+32205623 | MS.gene065874:CDS |
| ATTTGTGTTAGGCGGCAGTA+TGG | 0.464788 | 4.2:-32204290 | None:intergenic |
| ATTCCATCTCGCTGCTCGGC+AGG | 0.465981 | 4.2:-32202066 | None:intergenic |
| GCCACCGTCGCCGCCTTCTA+CGG | 0.469747 | 4.2:+32200611 | MS.gene065874:CDS |
| TTTATGCATGAGACACATCC+TGG | 0.470454 | 4.2:+32207507 | MS.gene065874:CDS |
| CCCAAAACAGGATCCATCAT+TGG | 0.476317 | 4.2:-32210141 | None:intergenic |
| CAACCTTTCCGTTCGAAATG+AGG | 0.482971 | 4.2:-32202254 | None:intergenic |
| GCTGAAGATCAACCACAGAT+TGG | 0.484039 | 4.2:+32210102 | MS.gene065874:CDS |
| GCAAGCAAAAGACCTGATTT+GGG | 0.487434 | 4.2:-32208960 | None:intergenic |
| CATTGTCCTTCAAGGTTTCA+CGG | 0.489746 | 4.2:-32205777 | None:intergenic |
| GCAGGTTCACATCCGCATCC+TGG | 0.490283 | 4.2:+32204702 | MS.gene065874:intron |
| TTTGGACTACTGGAATTCCT+TGG | 0.490547 | 4.2:+32204904 | MS.gene065874:CDS |
| GCCTCGGGGATATTTGTGTT+AGG | 0.490648 | 4.2:-32204301 | None:intergenic |
| AAGGCATACAGATTCGTAGA+AGG | 0.492583 | 4.2:-32208765 | None:intergenic |
| GCAGCTTCTGCGAACTTGAT+GGG | 0.497457 | 4.2:+32204968 | MS.gene065874:CDS |
| AGCGTAAGATTTCGATATGC+TGG | 0.500147 | 4.2:-32203980 | None:intergenic |
| TCGCTTGATAGGTATGTTGT+TGG | 0.504977 | 4.2:+32207417 | MS.gene065874:intron |
| TCATAGTTGAAGATGAAAAT+GGG | 0.505293 | 4.2:+32205746 | MS.gene065874:CDS |
| ACACTGTTGATTCATGGAAA+AGG | 0.505592 | 4.2:-32210968 | None:intergenic |
| AACAACTCAGTGGTGAGGAT+TGG | 0.507258 | 4.2:+32206431 | MS.gene065874:CDS |
| AAATGCTGATAAGATATTCA+AGG | 0.507542 | 4.2:-32204762 | None:intergenic |
| CAACGTCGTCAGCTTTATGC+TGG | 0.507554 | 4.2:+32205664 | MS.gene065874:CDS |
| AGATCATTGTGATTTGAGGC+AGG | 0.510406 | 4.2:-32209715 | None:intergenic |
| AGTTGTTATATTCTCTTGAG+TGG | 0.513869 | 4.2:-32204728 | None:intergenic |
| TAAGCTATTGTGCAAAAGCT+TGG | 0.514003 | 4.2:+32203561 | MS.gene065874:CDS |
| CCTGGTATGGTTGATGGGCA+CGG | 0.514902 | 4.2:+32205628 | MS.gene065874:CDS |
| CCATGATGATACTGAAAAGC+AGG | 0.516021 | 4.2:+32206028 | MS.gene065874:CDS |
| TGGACATGTTGAATGTGTAC+AGG | 0.517694 | 4.2:+32209741 | MS.gene065874:CDS |
| GTCGCCGCCTTCTACGGCAC+TGG | 0.520083 | 4.2:+32200617 | MS.gene065874:CDS |
| CTGAGCTTCTCAGCGGCCAT+CGG | 0.521732 | 4.2:-32200551 | None:intergenic |
| ATCAAGTTCGCAGAAGCTGC+AGG | 0.523514 | 4.2:-32204965 | None:intergenic |
| TGTGCTATCGGCATCCCAAA+GGG | 0.529449 | 4.2:+32203761 | MS.gene065874:CDS |
| GCCGTAGAAGGCGGCGACGG+TGG | 0.532551 | 4.2:-32200612 | None:intergenic |
| TATTGTCCGTGAAACCTTGA+AGG | 0.534873 | 4.2:+32205771 | MS.gene065874:CDS |
| TGGTTCCATGATAGAAGAGC+AGG | 0.535654 | 4.2:+32206501 | MS.gene065874:CDS |
| CAAGGGGATCCATGATAAGA+AGG | 0.538201 | 4.2:-32203820 | None:intergenic |
| GAAGAGAGAAGAACTTAAGC+CGG | 0.538221 | 4.2:-32210873 | None:intergenic |
| GATAGAAGTTCAGATACAAA+TGG | 0.542603 | 4.2:-32208695 | None:intergenic |
| AGCATTCTCAACTTTGACAT+GGG | 0.546626 | 4.2:-32205688 | None:intergenic |
| TTTCATTCCATCTCGCTGCT+CGG | 0.547958 | 4.2:-32202070 | None:intergenic |
| CAATTTGAATACACTCTGCT+GGG | 0.548023 | 4.2:+32206462 | MS.gene065874:CDS |
| CCGTGCCCATCAACCATACC+AGG | 0.548181 | 4.2:-32205628 | None:intergenic |
| ATGGATGGAAATTATAGGCC+AGG | 0.548256 | 4.2:+32209100 | MS.gene065874:CDS |
| CTAGGAATGCTCCTGATGCA+AGG | 0.552257 | 4.2:+32210172 | MS.gene065874:CDS |
| AAGATGTATGGTATATTCAT+GGG | 0.555548 | 4.2:+32204137 | MS.gene065874:CDS |
| TCGATGCAGTTCGGTTAAGA+GGG | 0.559242 | 4.2:+32210044 | MS.gene065874:intron |
| TTGAAGATTACCCTGAGCAC+CGG | 0.559648 | 4.2:+32210854 | MS.gene065874:CDS |
| GTGCAATATGTCAAGATGTA+TGG | 0.559915 | 4.2:+32204125 | MS.gene065874:CDS |
| TGCAAAACAATCCTGATATG+TGG | 0.562075 | 4.2:+32201002 | MS.gene065874:CDS |
| CTACTGGAATTCCTTGGTGT+CGG | 0.563467 | 4.2:+32204910 | MS.gene065874:CDS |
| CTTGACAAACAGATCAGTGC+AGG | 0.563746 | 4.2:-32210922 | None:intergenic |
| TCGAGTAACGGAACATCGAT+CGG | 0.565699 | 4.2:-32200587 | None:intergenic |
| AGGAAAACAATGAGTAGCTA+TGG | 0.566018 | 4.2:-32210902 | None:intergenic |
| GATCTGCAATAGTGATTGGA+AGG | 0.567155 | 4.2:-32208721 | None:intergenic |
| GCGACGGTGGCGTCGAGTAA+CGG | 0.567435 | 4.2:-32200599 | None:intergenic |
| CTTGAGTGGATTCCAGGATG+CGG | 0.572251 | 4.2:-32204714 | None:intergenic |
| TTATATATTTGAATCACCGT+TGG | 0.573963 | 4.2:+32203845 | MS.gene065874:CDS |
| GTTATGCTTATATGTGCTAT+CGG | 0.574920 | 4.2:+32203749 | MS.gene065874:CDS |
| TTACCTGCCGAGCAGCGAGA+TGG | 0.576301 | 4.2:+32202063 | MS.gene065874:CDS |
| AGAACTTAAGCCGGTGCTCA+GGG | 0.577552 | 4.2:-32210864 | None:intergenic |
| AGCATGAGTGGCCAGCAAGA+TGG | 0.577675 | 4.2:+32202470 | MS.gene065874:CDS |
| GTAGAAGGAGTGTATCTGAT+GGG | 0.578468 | 4.2:-32208750 | None:intergenic |
| ATTGCCATGTGCATATGCCT+CGG | 0.578592 | 4.2:-32204317 | None:intergenic |
| TCCTGATGCAAGGGAATCTG+AGG | 0.583164 | 4.2:+32210182 | MS.gene065874:CDS |
| ATGTGCTATCGGCATCCCAA+AGG | 0.587524 | 4.2:+32203760 | MS.gene065874:CDS |
| CGTAGAAGGAGTGTATCTGA+TGG | 0.588720 | 4.2:-32208751 | None:intergenic |
| TGATTCAAATATATAACCCA+AGG | 0.590786 | 4.2:-32203838 | None:intergenic |
| CGTGTAATCTGCAGATGCTG+AGG | 0.591084 | 4.2:+32206398 | MS.gene065874:intron |
| AGAAAGCAAGAAACAAAACC+TGG | 0.594629 | 4.2:-32210945 | None:intergenic |
| AAGCATTCTCAACTTTGACA+TGG | 0.596752 | 4.2:-32205689 | None:intergenic |
| AGGCCTCATTTCGAACGGAA+AGG | 0.600634 | 4.2:+32202251 | MS.gene065874:CDS |
| TAGGAATGCTCCTGATGCAA+GGG | 0.607736 | 4.2:+32210173 | MS.gene065874:CDS |
| AGTGCCGTAGAAGGCGGCGA+CGG | 0.612587 | 4.2:-32200615 | None:intergenic |
| GTTTACTTGACAGATTATGA+GGG | 0.612625 | 4.2:+32205977 | MS.gene065874:intron |
| TCGGGGATATTTGTGTTAGG+CGG | 0.615711 | 4.2:-32204298 | None:intergenic |
| GATTCAAATATATAACCCAA+GGG | 0.617377 | 4.2:-32203837 | None:intergenic |
| GGCATGCAATGTAGATAGTG+TGG | 0.618242 | 4.2:-32203799 | None:intergenic |
| GATTTCGATATGCTGGAACT+GGG | 0.620969 | 4.2:-32203973 | None:intergenic |
| ATCCCCGAGGCATATGCACA+TGG | 0.622830 | 4.2:+32204313 | MS.gene065874:CDS |
| AATCTATGTGAAATCACGAA+GGG | 0.623585 | 4.2:+32207284 | MS.gene065874:CDS |
| AACAATGAGTAGCTATGGCG+CGG | 0.631317 | 4.2:-32210897 | None:intergenic |
| AGAGAGATGAATTTCTTCAG+CGG | 0.635384 | 4.2:+32208926 | MS.gene065874:CDS |
| AAAACAGGATCCATCATTGG+TGG | 0.638516 | 4.2:-32210138 | None:intergenic |
| AATGCTTATGATCTGTCGAA+TGG | 0.640679 | 4.2:+32205705 | MS.gene065874:CDS |
| AGATCCAGTGCCGTAGAAGG+CGG | 0.642341 | 4.2:-32200621 | None:intergenic |
| AAGTAAACAACTCAGTGGTG+AGG | 0.642832 | 4.2:+32206426 | MS.gene065874:CDS |
| TAATACCTGAACAATGATGT+CGG | 0.643354 | 4.2:-32202103 | None:intergenic |
| CAACGAGGCCTCATTTCGAA+CGG | 0.643519 | 4.2:+32202246 | MS.gene065874:CDS |
| TATTCCTGATCTTGTCGCAG+CGG | 0.643593 | 4.2:+32202501 | MS.gene065874:CDS |
| TCGAATGGCTAAACCCGAAG+AGG | 0.647046 | 4.2:+32205720 | MS.gene065874:CDS |
| CGGCACTGGATCTAAGCAAG+AGG | 0.649693 | 4.2:+32200631 | MS.gene065874:CDS |
| TGCAGTAAACATCTCATACA+CGG | 0.651488 | 4.2:-32211000 | None:intergenic |
| TCAGTGGTGAGGATTGGACC+TGG | 0.651890 | 4.2:+32206437 | MS.gene065874:CDS |
| CTCAAACAGCTCCGACACCA+AGG | 0.652968 | 4.2:-32204921 | None:intergenic |
| AAATCTATGTGAAATCACGA+AGG | 0.654119 | 4.2:+32207283 | MS.gene065874:CDS |
| TAGAAGGAGTGTATCTGATG+GGG | 0.661038 | 4.2:-32208749 | None:intergenic |
| TACGCTGCAATGTTTAACAG+AGG | 0.663731 | 4.2:+32203997 | MS.gene065874:CDS |
| TGCATAGCTTTCTAGCAACG+AGG | 0.670460 | 4.2:+32202231 | MS.gene065874:intron |
| TGCCATGTGCATATGCCTCG+GGG | 0.678438 | 4.2:-32204315 | None:intergenic |
| AACGATCTGTGAGAATTGCA+TGG | 0.684162 | 4.2:+32202537 | MS.gene065874:CDS |
| GCGTAAGTTTGTGATCACCC+AGG | 0.698935 | 4.2:+32208570 | MS.gene065874:CDS |
| GGATTATCCAAACTTCGATG+TGG | 0.699508 | 4.2:-32204944 | None:intergenic |
| ATTCAAATATATAACCCAAG+GGG | 0.700367 | 4.2:-32203836 | None:intergenic |
| AAAACGGCTTCAAATATGCG+AGG | 0.702127 | 4.2:-32210427 | None:intergenic |
| AAATTAAGTAAACAACTCAG+TGG | 0.731890 | 4.2:+32206421 | MS.gene065874:CDS |
| GCCTAACACAAATATCCCCG+AGG | 0.742982 | 4.2:+32204300 | MS.gene065874:CDS |
| CAAATCTCTGAGCTTCTCAG+CGG | 0.769266 | 4.2:-32200558 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 32200554 | 32211035 | 32200554 | ID=MS.gene065874 |
| chr4.2 | mRNA | 32200554 | 32211035 | 32200554 | ID=MS.gene065874.t1;Parent=MS.gene065874 |
| chr4.2 | exon | 32200554 | 32200652 | 32200554 | ID=MS.gene065874.t1.exon1;Parent=MS.gene065874.t1 |
| chr4.2 | CDS | 32200554 | 32200652 | 32200554 | ID=cds.MS.gene065874.t1;Parent=MS.gene065874.t1 |
| chr4.2 | exon | 32200971 | 32201087 | 32200971 | ID=MS.gene065874.t1.exon2;Parent=MS.gene065874.t1 |
| chr4.2 | CDS | 32200971 | 32201087 | 32200971 | ID=cds.MS.gene065874.t1;Parent=MS.gene065874.t1 |
| chr4.2 | exon | 32202027 | 32202119 | 32202027 | ID=MS.gene065874.t1.exon3;Parent=MS.gene065874.t1 |
| chr4.2 | CDS | 32202027 | 32202119 | 32202027 | ID=cds.MS.gene065874.t1;Parent=MS.gene065874.t1 |
| chr4.2 | exon | 32202238 | 32202309 | 32202238 | ID=MS.gene065874.t1.exon4;Parent=MS.gene065874.t1 |
| chr4.2 | CDS | 32202238 | 32202309 | 32202238 | ID=cds.MS.gene065874.t1;Parent=MS.gene065874.t1 |
| chr4.2 | exon | 32202463 | 32202570 | 32202463 | ID=MS.gene065874.t1.exon5;Parent=MS.gene065874.t1 |
| chr4.2 | CDS | 32202463 | 32202570 | 32202463 | ID=cds.MS.gene065874.t1;Parent=MS.gene065874.t1 |
| chr4.2 | exon | 32202642 | 32202724 | 32202642 | ID=MS.gene065874.t1.exon6;Parent=MS.gene065874.t1 |
| chr4.2 | CDS | 32202642 | 32202724 | 32202642 | ID=cds.MS.gene065874.t1;Parent=MS.gene065874.t1 |
| chr4.2 | exon | 32203547 | 32203582 | 32203547 | ID=MS.gene065874.t1.exon7;Parent=MS.gene065874.t1 |
| chr4.2 | CDS | 32203547 | 32203582 | 32203547 | ID=cds.MS.gene065874.t1;Parent=MS.gene065874.t1 |
| chr4.2 | exon | 32203728 | 32203866 | 32203728 | ID=MS.gene065874.t1.exon8;Parent=MS.gene065874.t1 |
| chr4.2 | CDS | 32203728 | 32203866 | 32203728 | ID=cds.MS.gene065874.t1;Parent=MS.gene065874.t1 |
| chr4.2 | exon | 32203950 | 32204018 | 32203950 | ID=MS.gene065874.t1.exon9;Parent=MS.gene065874.t1 |
| chr4.2 | CDS | 32203950 | 32204018 | 32203950 | ID=cds.MS.gene065874.t1;Parent=MS.gene065874.t1 |
| chr4.2 | exon | 32204092 | 32204169 | 32204092 | ID=MS.gene065874.t1.exon10;Parent=MS.gene065874.t1 |
| chr4.2 | CDS | 32204092 | 32204169 | 32204092 | ID=cds.MS.gene065874.t1;Parent=MS.gene065874.t1 |
| chr4.2 | exon | 32204289 | 32204351 | 32204289 | ID=MS.gene065874.t1.exon11;Parent=MS.gene065874.t1 |
| chr4.2 | CDS | 32204289 | 32204351 | 32204289 | ID=cds.MS.gene065874.t1;Parent=MS.gene065874.t1 |
| chr4.2 | exon | 32204706 | 32204813 | 32204706 | ID=MS.gene065874.t1.exon12;Parent=MS.gene065874.t1 |
| chr4.2 | CDS | 32204706 | 32204813 | 32204706 | ID=cds.MS.gene065874.t1;Parent=MS.gene065874.t1 |
| chr4.2 | exon | 32204899 | 32204997 | 32204899 | ID=MS.gene065874.t1.exon13;Parent=MS.gene065874.t1 |
| chr4.2 | CDS | 32204899 | 32204997 | 32204899 | ID=cds.MS.gene065874.t1;Parent=MS.gene065874.t1 |
| chr4.2 | exon | 32205613 | 32205819 | 32205613 | ID=MS.gene065874.t1.exon14;Parent=MS.gene065874.t1 |
| chr4.2 | CDS | 32205613 | 32205819 | 32205613 | ID=cds.MS.gene065874.t1;Parent=MS.gene065874.t1 |
| chr4.2 | exon | 32205990 | 32206049 | 32205990 | ID=MS.gene065874.t1.exon15;Parent=MS.gene065874.t1 |
| chr4.2 | CDS | 32205990 | 32206049 | 32205990 | ID=cds.MS.gene065874.t1;Parent=MS.gene065874.t1 |
| chr4.2 | exon | 32206412 | 32206522 | 32206412 | ID=MS.gene065874.t1.exon16;Parent=MS.gene065874.t1 |
| chr4.2 | CDS | 32206412 | 32206522 | 32206412 | ID=cds.MS.gene065874.t1;Parent=MS.gene065874.t1 |
| chr4.2 | exon | 32207245 | 32207342 | 32207245 | ID=MS.gene065874.t1.exon17;Parent=MS.gene065874.t1 |
| chr4.2 | CDS | 32207245 | 32207342 | 32207245 | ID=cds.MS.gene065874.t1;Parent=MS.gene065874.t1 |
| chr4.2 | exon | 32207428 | 32207536 | 32207428 | ID=MS.gene065874.t1.exon18;Parent=MS.gene065874.t1 |
| chr4.2 | CDS | 32207428 | 32207536 | 32207428 | ID=cds.MS.gene065874.t1;Parent=MS.gene065874.t1 |
| chr4.2 | exon | 32208526 | 32208591 | 32208526 | ID=MS.gene065874.t1.exon19;Parent=MS.gene065874.t1 |
| chr4.2 | CDS | 32208526 | 32208591 | 32208526 | ID=cds.MS.gene065874.t1;Parent=MS.gene065874.t1 |
| chr4.2 | exon | 32208680 | 32208778 | 32208680 | ID=MS.gene065874.t1.exon20;Parent=MS.gene065874.t1 |
| chr4.2 | CDS | 32208680 | 32208778 | 32208680 | ID=cds.MS.gene065874.t1;Parent=MS.gene065874.t1 |
| chr4.2 | exon | 32208889 | 32208969 | 32208889 | ID=MS.gene065874.t1.exon21;Parent=MS.gene065874.t1 |
| chr4.2 | CDS | 32208889 | 32208969 | 32208889 | ID=cds.MS.gene065874.t1;Parent=MS.gene065874.t1 |
| chr4.2 | exon | 32209098 | 32209187 | 32209098 | ID=MS.gene065874.t1.exon22;Parent=MS.gene065874.t1 |
| chr4.2 | CDS | 32209098 | 32209187 | 32209098 | ID=cds.MS.gene065874.t1;Parent=MS.gene065874.t1 |
| chr4.2 | exon | 32209677 | 32209762 | 32209677 | ID=MS.gene065874.t1.exon23;Parent=MS.gene065874.t1 |
| chr4.2 | CDS | 32209677 | 32209762 | 32209677 | ID=cds.MS.gene065874.t1;Parent=MS.gene065874.t1 |
| chr4.2 | exon | 32210053 | 32210235 | 32210053 | ID=MS.gene065874.t1.exon24;Parent=MS.gene065874.t1 |
| chr4.2 | CDS | 32210053 | 32210235 | 32210053 | ID=cds.MS.gene065874.t1;Parent=MS.gene065874.t1 |
| chr4.2 | exon | 32210399 | 32210465 | 32210399 | ID=MS.gene065874.t1.exon25;Parent=MS.gene065874.t1 |
| chr4.2 | CDS | 32210399 | 32210465 | 32210399 | ID=cds.MS.gene065874.t1;Parent=MS.gene065874.t1 |
| chr4.2 | exon | 32210838 | 32211035 | 32210838 | ID=MS.gene065874.t1.exon26;Parent=MS.gene065874.t1 |
| chr4.2 | CDS | 32210838 | 32211035 | 32210838 | ID=cds.MS.gene065874.t1;Parent=MS.gene065874.t1 |
| Gene Sequence |
| Protein sequence |
