AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene065894

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene065894.t1 MTR_4g077880 97.227 613 17 0 60 672 1 613 0.0 1231
MS.gene065894.t1 MTR_4g077880 96.614 443 15 0 60 502 1 443 0.0 892
MS.gene065894.t1 MTR_6g005760 70.867 611 171 3 60 670 1 604 0.0 850
MS.gene065894.t1 MTR_6g005760 75.891 477 114 1 194 670 1 476 0.0 726
MS.gene065894.t1 MTR_5g020530 58.874 586 218 4 85 666 58 624 0.0 672
MS.gene065894.t1 MTR_6g005760 65.011 443 149 2 60 502 1 437 0.0 555
MS.gene065894.t1 MTR_2g024440 33.136 169 107 5 414 579 329 494 7.19e-16 81.6
MS.gene065894.t1 MTR_2g024440 33.136 169 107 5 414 579 328 493 7.82e-16 81.6
MS.gene065894.t1 MTR_2g024440 33.136 169 107 5 414 579 246 411 8.41e-16 81.3
MS.gene065894.t1 MTR_8g099065 32.680 153 97 3 427 574 570 721 9.39e-16 81.6
MS.gene065894.t1 MTR_5g009840 29.327 208 116 6 427 629 552 733 4.19e-15 79.7
MS.gene065894.t1 MTR_3g092080 33.113 151 96 4 426 572 120 269 4.30e-15 77.8
MS.gene065894.t1 MTR_3g092080 33.113 151 96 4 426 572 120 269 5.37e-15 77.8
MS.gene065894.t1 MTR_1g101870 30.660 212 107 7 427 629 542 722 6.41e-15 79.0
MS.gene065894.t1 MTR_1g101870 30.660 212 107 7 427 629 594 774 6.65e-15 79.0
MS.gene065894.t1 MTR_4g053350 27.885 208 121 5 427 630 162 344 1.04e-14 77.4
MS.gene065894.t1 MTR_4g053350 27.885 208 121 5 427 630 162 344 1.10e-14 77.4
MS.gene065894.t1 MTR_7g101870 31.288 163 104 5 419 574 507 668 1.18e-14 78.2
MS.gene065894.t1 MTR_7g101870 31.333 150 96 6 427 571 242 389 4.60e-13 73.2
MS.gene065894.t1 MTR_2g086160 27.723 202 117 5 427 624 167 343 1.19e-14 76.3
MS.gene065894.t1 MTR_2g095210 31.288 163 104 5 419 574 434 595 1.31e-14 77.8
MS.gene065894.t1 MTR_2g086160 27.404 208 122 5 427 630 167 349 1.42e-14 77.0
MS.gene065894.t1 MTR_1g083330 31.884 207 116 7 383 571 154 353 1.63e-14 76.6
MS.gene065894.t1 MTR_4g033235 31.884 207 116 7 383 571 155 354 1.94e-14 76.3
MS.gene065894.t1 MTR_1g063380 31.288 163 104 5 419 574 506 667 1.96e-14 77.4
MS.gene065894.t1 MTR_1g063380 31.333 150 96 6 427 571 241 388 1.35e-12 71.6
MS.gene065894.t1 MTR_6g033740 29.612 206 111 6 427 626 536 713 3.82e-14 76.6
MS.gene065894.t1 MTR_3g089100 30.000 210 112 6 427 629 934 1115 4.54e-14 76.6
MS.gene065894.t1 MTR_3g089100 30.000 210 112 6 427 629 939 1120 4.58e-14 76.6
MS.gene065894.t1 MTR_3g089100 30.000 210 112 6 427 629 968 1149 5.03e-14 76.3
MS.gene065894.t1 MTR_1g088730 29.048 210 114 6 427 629 969 1150 5.17e-14 76.3
MS.gene065894.t1 MTR_1g099480 33.987 153 95 4 427 574 505 656 6.12e-14 75.9
MS.gene065894.t1 MTR_3g092070 33.766 154 91 5 426 572 117 266 6.49e-14 74.3
MS.gene065894.t1 MTR_1g088750 29.048 210 114 6 427 629 975 1156 1.00e-13 75.5
MS.gene065894.t1 MTR_1g088750 29.048 210 114 6 427 629 926 1107 1.03e-13 75.5
MS.gene065894.t1 MTR_3g112260 29.944 177 104 6 402 571 159 322 1.25e-13 73.6
MS.gene065894.t1 MTR_3g092070 33.766 154 91 5 426 572 117 266 1.29e-13 73.2
MS.gene065894.t1 MTR_3g117230 29.944 177 104 6 402 571 162 325 2.50e-13 72.8
MS.gene065894.t1 MTR_4g094270 33.113 151 92 5 429 571 194 343 4.95e-13 72.0
MS.gene065894.t1 MTR_8g099065 33.077 130 81 3 427 551 570 698 8.61e-13 72.0
MS.gene065894.t1 MTR_1g028390 28.761 226 126 8 429 647 366 563 2.70e-12 70.5
MS.gene065894.t1 MTR_2g095320 30.667 150 97 6 427 571 185 332 2.77e-12 70.5
MS.gene065894.t1 MTR_3g104470 30.000 220 114 9 429 638 261 450 4.38e-12 69.7
MS.gene065894.t1 MTR_4g011810 26.728 217 140 5 427 625 277 492 4.49e-12 69.3
MS.gene065894.t1 MTR_7g075520 31.206 141 94 2 427 564 247 387 1.25e-11 67.8
MS.gene065894.t1 MTR_8g056860 31.410 156 91 5 429 571 507 659 2.62e-11 67.4
MS.gene065894.t1 MTR_1g099480 34.109 129 79 4 427 550 505 632 3.61e-11 66.6
MS.gene065894.t1 MTR_6g023875 24.696 247 152 6 426 661 416 639 4.05e-11 66.6
MS.gene065894.t1 MTR_4g067100 28.692 237 125 11 424 642 413 623 9.26e-11 65.9
MS.gene065894.t1 MTR_4g067100 28.692 237 125 11 424 642 413 623 1.00e-10 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene065894.t1 AT5G16930 68.388 639 171 4 60 668 1 638 0.0 866
MS.gene065894.t1 AT3G03060 73.519 574 149 1 95 668 56 626 0.0 856
MS.gene065894.t1 AT2G18330 59.291 592 231 4 84 665 37 628 0.0 662
MS.gene065894.t1 AT4G36580 57.976 583 230 5 87 665 51 622 0.0 638
MS.gene065894.t1 AT3G19740 31.776 214 112 7 427 635 738 922 3.86e-18 89.7
MS.gene065894.t1 AT1G50140 31.308 214 113 7 427 635 748 932 3.82e-17 86.3
MS.gene065894.t1 AT1G50140 31.308 214 113 7 427 635 748 932 3.82e-17 86.3
MS.gene065894.t1 AT1G50140 31.308 214 113 7 427 635 748 932 3.82e-17 86.3
MS.gene065894.t1 AT1G50140 31.308 214 113 7 427 635 726 910 4.11e-17 86.3
MS.gene065894.t1 AT1G50140 31.308 214 113 7 427 635 726 910 4.11e-17 86.3
MS.gene065894.t1 AT5G53540 35.065 154 89 4 426 572 120 269 2.02e-15 79.3
MS.gene065894.t1 AT4G04180 33.146 178 108 5 414 588 343 512 2.08e-15 80.5
MS.gene065894.t1 AT4G04180 33.146 178 108 5 414 588 348 517 2.25e-15 80.1
MS.gene065894.t1 AT1G53780 32.105 190 109 6 389 571 368 544 2.93e-15 79.7
MS.gene065894.t1 AT1G53780 32.105 190 109 6 389 571 347 523 3.21e-15 79.7
MS.gene065894.t1 AT1G53780 32.105 190 109 6 389 571 347 523 3.21e-15 79.7
MS.gene065894.t1 AT1G53780 32.105 190 109 6 389 571 346 522 3.29e-15 79.7
MS.gene065894.t1 AT4G28000 28.063 253 132 8 427 671 553 763 3.43e-15 80.1
MS.gene065894.t1 AT4G28000 28.063 253 132 8 427 671 551 761 3.60e-15 80.1
MS.gene065894.t1 AT4G28000 28.063 253 132 8 427 671 553 763 3.73e-15 79.7
MS.gene065894.t1 AT5G03340 32.515 163 102 6 419 574 505 666 9.80e-15 78.6
MS.gene065894.t1 AT5G03340 31.333 150 96 6 427 571 240 387 1.30e-12 71.6
MS.gene065894.t1 AT3G53230 31.902 163 103 6 419 574 506 667 1.03e-14 78.6
MS.gene065894.t1 AT3G53230 31.333 150 96 6 427 571 241 388 5.41e-13 72.8
MS.gene065894.t1 AT1G02890 30.000 210 112 6 427 629 978 1159 1.05e-14 78.6
MS.gene065894.t1 AT1G64110 31.410 156 95 4 427 574 549 700 2.33e-14 77.4
MS.gene065894.t1 AT3G09840 29.469 207 123 8 384 574 468 667 2.34e-14 77.4
MS.gene065894.t1 AT3G09840 30.058 173 102 7 404 571 229 387 1.21e-12 71.6
MS.gene065894.t1 AT1G64110 31.410 156 95 4 427 574 554 705 2.44e-14 77.4
MS.gene065894.t1 AT1G64110 31.410 156 95 4 427 574 554 705 2.44e-14 77.4
MS.gene065894.t1 AT1G64110 31.410 156 95 4 427 574 552 703 2.48e-14 77.4
MS.gene065894.t1 AT1G64110 31.410 156 95 4 427 574 552 703 2.48e-14 77.4
MS.gene065894.t1 AT1G53750 31.053 190 111 6 389 571 175 351 4.35e-14 75.5
MS.gene065894.t1 AT1G45000 29.944 177 104 6 402 571 159 322 5.84e-14 74.7
MS.gene065894.t1 AT5G52882 31.410 156 95 4 427 574 550 701 8.50e-14 75.5
MS.gene065894.t1 AT3G05530 31.401 207 117 7 383 571 155 354 8.92e-14 74.3
MS.gene065894.t1 AT4G02480 29.524 210 113 6 427 629 997 1178 9.51e-14 75.5
MS.gene065894.t1 AT2G27600 30.667 150 99 3 427 572 164 312 1.14e-13 74.3
MS.gene065894.t1 AT1G09100 31.034 203 123 5 383 571 154 353 1.19e-13 73.9
MS.gene065894.t1 AT5G19990 33.113 151 92 5 429 571 196 345 1.37e-13 73.9
MS.gene065894.t1 AT5G19990 33.113 151 92 5 429 571 196 345 1.37e-13 73.9
MS.gene065894.t1 AT5G19990 33.113 151 92 5 429 571 138 287 1.38e-13 73.2
MS.gene065894.t1 AT5G20000 33.113 151 92 5 429 571 196 345 1.65e-13 73.6
MS.gene065894.t1 AT4G27680 32.468 154 93 4 426 572 117 266 2.12e-13 73.2
MS.gene065894.t1 AT5G53170 27.711 249 145 9 406 647 373 593 3.04e-13 73.6
MS.gene065894.t1 AT5G43010 29.379 177 105 6 402 571 159 322 3.49e-13 72.4
MS.gene065894.t1 AT1G79560 26.768 198 125 6 391 571 485 679 6.52e-13 72.8
MS.gene065894.t1 AT1G79560 26.768 198 125 6 391 571 485 679 6.59e-13 72.8
MS.gene065894.t1 AT1G79560 26.768 198 125 6 391 571 485 679 7.21e-13 72.8
MS.gene065894.t1 AT1G80350 27.358 212 117 7 427 627 271 456 3.42e-12 69.7
MS.gene065894.t1 AT4G24860 27.619 210 117 6 427 629 854 1035 7.16e-12 69.3
MS.gene065894.t1 AT4G24860 27.619 210 117 6 427 629 852 1033 7.28e-12 69.3
MS.gene065894.t1 AT4G24860 27.619 210 117 6 427 629 827 1008 7.74e-12 69.3
MS.gene065894.t1 AT4G24860 27.619 210 117 6 427 629 850 1031 8.00e-12 69.3
MS.gene065894.t1 AT3G27120 26.761 213 122 6 422 627 430 615 7.25e-11 65.9

Find 174 sgRNAs with CRISPR-Local

Find 359 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGGATTGTTGTTTCGGAATT+TGG 0.127468 4.2:-31973218 None:intergenic
GCCATTGTCTTTCCTGTTCC+TGG 0.175730 4.2:-31975963 None:intergenic
GTTGTGTAGGGTCCGCTATC+TGG 0.180249 4.2:+31971605 MS.gene065894:CDS
GGGTGGCGGCGGAGGGGTTT+CGG 0.183344 4.2:-31973197 None:intergenic
CGGAATTTGGGTGGCGGCGG+AGG 0.187431 4.2:-31973205 None:intergenic
TCAAAAGTCAGAAATGATTT+TGG 0.201736 4.2:+31975828 MS.gene065894:CDS
GGTTTCCTTTCAATAGTCTT+TGG 0.216175 4.2:-31977346 None:intergenic
GGGATATGTTGATAGAATAT+TGG 0.277434 4.2:+31975698 MS.gene065894:CDS
GGTGGCGGCGGAGGGGTTTC+GGG 0.277440 4.2:-31973196 None:intergenic
GCTCCTTTGACGAGAGGTTC+TGG 0.291696 4.2:-31973265 None:intergenic
CCTGATCTTAATAACAGAAT+TGG 0.296514 4.2:+31975867 MS.gene065894:CDS
GGGAAGGTGCACGGGTTATA+TGG 0.307689 4.2:+31975676 MS.gene065894:intron
ATTGGGCCAAGAAGTCAAAA+AGG 0.311892 4.2:+31976849 MS.gene065894:CDS
GGATTGTTGTTTCGGAATTT+GGG 0.314786 4.2:-31973217 None:intergenic
AAAGAAGCTTGGACAGCTTC+AGG 0.314911 4.2:+31974516 MS.gene065894:CDS
ATGGTCAAAAGTAGCATTTA+TGG 0.315460 4.2:-31974958 None:intergenic
AGCGATATCGTGTAGGGTTT+TGG 0.320059 4.2:-31973287 None:intergenic
ATCCCAGTTGGCTAAGTATA+AGG 0.330968 4.2:+31974549 MS.gene065894:CDS
GGAATTTGGGTGGCGGCGGA+GGG 0.344720 4.2:-31973204 None:intergenic
CCACAAAAGATAGAGATAAA+AGG 0.345324 4.2:+31977368 MS.gene065894:CDS
AGATACACCAATTGTTTGAT+TGG 0.348674 4.2:+31976831 MS.gene065894:CDS
TAGTTCTGGGATTGTTGTTT+CGG 0.349197 4.2:-31973225 None:intergenic
TTTATATCGCTCGTCTTCTC+CGG 0.350777 4.2:-31977261 None:intergenic
TAAACTTCTTAAGCTCTATC+TGG 0.354967 4.2:+31977280 MS.gene065894:CDS
TCCGCCATCGCCGCCGCATC+TGG 0.356150 4.2:+31973124 MS.gene065894:CDS
CATCCTTATACTTAGCCAAC+TGG 0.376261 4.2:-31974552 None:intergenic
TGCAATAGAAGAACAGATTC+AGG 0.376449 4.2:+31974764 MS.gene065894:CDS
GCATCAACAGAGAAGAAAAT+TGG 0.380423 4.2:+31977556 MS.gene065894:CDS
GAATTTGGGTGGCGGCGGAG+GGG 0.384973 4.2:-31973203 None:intergenic
GGATATGTTGATAGAATATT+GGG 0.390817 4.2:+31975699 MS.gene065894:CDS
GGAAGGTGCACGGGTTATAT+GGG 0.394047 4.2:+31975677 MS.gene065894:CDS
CTCCGGGTAAGGGAAATTCT+AGG 0.395996 4.2:-31977244 None:intergenic
CTTGTCTTGATCTGTTAGAA+TGG 0.400483 4.2:-31975373 None:intergenic
TCACTTCGCGGAACAAGCTT+TGG 0.401628 4.2:-31977514 None:intergenic
GTCGCGTCCCCTTCTAATAT+AGG 0.403535 4.2:+31971675 MS.gene065894:CDS
GATACACCAATTGTTTGATT+GGG 0.403800 4.2:+31976832 MS.gene065894:CDS
TCGCGTCCCCTTCTAATATA+GGG 0.416777 4.2:+31971676 MS.gene065894:CDS
AAGGGCAAGGACTATGTCTT+TGG 0.419229 4.2:-31977165 None:intergenic
TCGCTCGTCTTCTCCGGGTA+AGG 0.420179 4.2:-31977255 None:intergenic
AAACCCAGCAGAGGTAGTTC+TGG 0.436154 4.2:-31973239 None:intergenic
AGGATGAGTTGACGAGGAAG+AGG 0.436565 4.2:+31974569 MS.gene065894:CDS
GAGATCACCGGGACGGTTTG+TGG 0.443356 4.2:-31977189 None:intergenic
TCTTGGCCCAATCAAACAAT+TGG 0.447585 4.2:-31976838 None:intergenic
CCAATTCTGTTATTAAGATC+AGG 0.447988 4.2:-31975867 None:intergenic
AATCCCAGAACTACCTCTGC+TGG 0.452685 4.2:+31973235 MS.gene065894:CDS
GTTTCGGGATCGTCGGAAGG+AGG 0.456998 4.2:-31973181 None:intergenic
TGTTGCGCCACTTGGGTCGC+AGG 0.457971 4.2:+31976799 MS.gene065894:CDS
TTGTGTAGGGTCCGCTATCT+GGG 0.458190 4.2:+31971606 MS.gene065894:CDS
CTGATCTTAATAACAGAATT+GGG 0.458795 4.2:+31975868 MS.gene065894:CDS
ACCGGGACGGTTTGTGGCAA+GGG 0.461614 4.2:-31977183 None:intergenic
CGCAAACTGAGGATGTTAGA+AGG 0.462722 4.2:+31974886 MS.gene065894:CDS
AGTGTCCAAGCTGCTGTGTA+TGG 0.463701 4.2:+31977470 MS.gene065894:CDS
CTAGATCAGTACGTCGGGAC+AGG 0.464042 4.2:-31975797 None:intergenic
TGGGACAACCATCATTGATC+CGG 0.468988 4.2:+31975718 MS.gene065894:CDS
TCGGGATCGTCGGAAGGAGG+TGG 0.469324 4.2:-31973178 None:intergenic
GTTGTGCGCCCTATATTAGA+AGG 0.472246 4.2:-31971684 None:intergenic
AATGACTGATGATATCATAA+AGG 0.473441 4.2:+31977391 MS.gene065894:CDS
GGAGTTACTGCTCTGGCAGC+AGG 0.476150 4.2:+31975414 MS.gene065894:CDS
GAAAAGAAACCTACGGCGTA+TGG 0.482986 4.2:-31973103 None:intergenic
TTTCGGAATTTGGGTGGCGG+CGG 0.483158 4.2:-31973208 None:intergenic
CGCTCGTCTTCTCCGGGTAA+GGG 0.484758 4.2:-31977254 None:intergenic
TTAGATTATGCATTGATGAC+CGG 0.491419 4.2:+31976770 MS.gene065894:CDS
AACCCAGCAGAGGTAGTTCT+GGG 0.492236 4.2:-31973238 None:intergenic
CTTTATAATCAATCACTTCG+CGG 0.492710 4.2:-31977526 None:intergenic
AGTTGGTGGAGTTACTGCTC+TGG 0.493332 4.2:+31975407 MS.gene065894:CDS
GAAACCAGATGCGGCGGCGA+TGG 0.494615 4.2:-31973128 None:intergenic
TTGTCTTTCCTGTTCCTGGA+GGG 0.498931 4.2:-31975959 None:intergenic
ACCAGATGCGGCGGCGATGG+CGG 0.499143 4.2:-31973125 None:intergenic
GAGACAAAGGATTACATATG+AGG 0.499675 4.2:+31974489 MS.gene065894:CDS
GACAAGTACATTGCCCAAGC+TGG 0.499789 4.2:+31977302 MS.gene065894:CDS
ATGTTTGTAGGGAAGGTGCA+CGG 0.502847 4.2:+31975667 MS.gene065894:intron
GACAAGTTAGTTGTAGCAGT+TGG 0.503199 4.2:+31975390 MS.gene065894:CDS
ATAGCGAAATACCCCTGGTC+TGG 0.503761 4.2:+31975750 MS.gene065894:CDS
GACGGTTTGTGGCAAGGGCA+AGG 0.504738 4.2:-31977178 None:intergenic
AAGTTAGTTGTAGCAGTTGG+TGG 0.505609 4.2:+31975393 MS.gene065894:CDS
TAATAACAGAATTGGGCAGC+TGG 0.508062 4.2:+31975875 MS.gene065894:CDS
TTATATCGCTCGTCTTCTCC+GGG 0.510092 4.2:-31977260 None:intergenic
GTCCTAGAATTTCCCTTACC+CGG 0.512713 4.2:+31977242 MS.gene065894:CDS
CCTCCTCATGATGTTGTGTA+GGG 0.513774 4.2:+31971593 None:intergenic
GGGGAGATGTTGCGCCACTT+GGG 0.513996 4.2:+31976792 MS.gene065894:CDS
TCCTCCTCATGATGTTGTGT+AGG 0.514658 4.2:+31971592 None:intergenic
CACCGGGACGGTTTGTGGCA+AGG 0.516618 4.2:-31977184 None:intergenic
TAGATTATGCATTGATGACC+GGG 0.517318 4.2:+31976771 MS.gene065894:CDS
CAAGCTGGATCAAGAAAACC+TGG 0.522707 4.2:+31977317 MS.gene065894:CDS
GCCCTTGCCACAAACCGTCC+CGG 0.523140 4.2:+31977182 MS.gene065894:CDS
CGGAGGGGTTTCGGGATCGT+CGG 0.523653 4.2:-31973188 None:intergenic
GACAAAGAGTGCACGGACAG+AGG 0.525324 4.2:-31971712 None:intergenic
AGATTCTAGATCAGTACGTC+GGG 0.529751 4.2:-31975802 None:intergenic
TGTTTGTAGGGAAGGTGCAC+GGG 0.530680 4.2:+31975668 MS.gene065894:intron
CAATCAAACTGCAGCAAGCT+CGG 0.531207 4.2:+31974739 MS.gene065894:CDS
AGATCTACGAGCCAACTCTC+TGG 0.533016 4.2:-31975988 None:intergenic
ACGAGACAACGTGCCAGACC+AGG 0.535901 4.2:-31975763 None:intergenic
AAAATGAACAAAAGAGAGCA+AGG 0.537617 4.2:+31974682 MS.gene065894:CDS
TCGTAAGACAATCAAAGTAA+AGG 0.540584 4.2:+31974827 MS.gene065894:CDS
TTGTTGTTTCGGAATTTGGG+TGG 0.542387 4.2:-31973214 None:intergenic
TGCTTCCATACACAGCAGCT+TGG 0.547388 4.2:-31977475 None:intergenic
GGGGTTTCGGGATCGTCGGA+AGG 0.548201 4.2:-31973184 None:intergenic
ACAAGCTGAATTCGCTGCAA+AGG 0.552019 4.2:+31973462 MS.gene065894:CDS
AGCTGCTGTGTATGGAAGCA+AGG 0.552228 4.2:+31977478 MS.gene065894:CDS
TATGTCTTTGGACTGGTCAC+CGG 0.552407 4.2:-31977153 None:intergenic
GACAATGGCTGCCAGAGAGT+TGG 0.552771 4.2:+31975977 MS.gene065894:CDS
GAGGACTCCCGGATCAATGA+TGG 0.553798 4.2:-31975726 None:intergenic
ACAAAGAGTGCACGGACAGA+GGG 0.553838 4.2:-31971711 None:intergenic
ATTGTCTTTCCTGTTCCTGG+AGG 0.553900 4.2:-31975960 None:intergenic
AATAGTCTTTGGACTAAACC+AGG 0.554618 4.2:-31977335 None:intergenic
CACGGCTGAATCGAGATCAC+CGG 0.555916 4.2:-31977201 None:intergenic
ATCCTTATACTTAGCCAACT+GGG 0.561737 4.2:-31974551 None:intergenic
AATGCGCTCCTCTCTCGTAC+CGG 0.565613 4.2:+31977134 MS.gene065894:CDS
ATTCTAGGACCTCATCAATA+CGG 0.565931 4.2:-31977229 None:intergenic
TTCTCTTGCAGGAGAGACAA+AGG 0.566720 4.2:+31974476 MS.gene065894:intron
GTTGACGAGGAAGAGGATGC+AGG 0.568502 4.2:+31974576 MS.gene065894:CDS
GTCGGAAGGAGGTGGAGCGT+CGG 0.568917 4.2:-31973170 None:intergenic
GATCCAGAACCTCTCGTCAA+AGG 0.570042 4.2:+31973262 MS.gene065894:CDS
TTCCCTTCCAGAAAATCCCT+CGG 0.570535 4.2:-31977429 None:intergenic
AGACCAGGGGTATTTCGCTA+TGG 0.570591 4.2:-31975748 None:intergenic
GGGACAACCATCATTGATCC+GGG 0.572797 4.2:+31975719 MS.gene065894:CDS
AAGTGGCGCAACATCTCCCC+CGG 0.577586 4.2:-31976789 None:intergenic
TTGTTTCGGAATTTGGGTGG+CGG 0.579209 4.2:-31973211 None:intergenic
ATTTCGCTATGGAGGACTCC+CGG 0.579912 4.2:-31975737 None:intergenic
CAACAGAGAAGAAAATTGGC+AGG 0.581658 4.2:+31977560 MS.gene065894:CDS
CCTCCATAGCGAAATACCCC+TGG 0.582328 4.2:+31975745 MS.gene065894:CDS
CGCGACTGTGGACATAAGAG+TGG 0.584510 4.2:-31971658 None:intergenic
GTGAAGTAGCGATATCGTGT+AGG 0.584677 4.2:-31973294 None:intergenic
TTAGTCCAAAGACTATTGAA+AGG 0.588142 4.2:+31977341 MS.gene065894:CDS
TGAAGTAGCGATATCGTGTA+GGG 0.589235 4.2:-31973293 None:intergenic
ATCCCAGAACTACCTCTGCT+GGG 0.589791 4.2:+31973236 MS.gene065894:CDS
GCGACTGTGGACATAAGAGT+GGG 0.590475 4.2:-31971657 None:intergenic
CTCATCAATACGGTCTGACA+CGG 0.591597 4.2:-31977219 None:intergenic
TTGTGCGCCCTATATTAGAA+GGG 0.592308 4.2:-31971683 None:intergenic
TAGATCAGTACGTCGGGACA+GGG 0.593352 4.2:-31975796 None:intergenic
CCAAGAGCTAGTGAAAATGC+AGG 0.594652 4.2:+31974707 MS.gene065894:CDS
GGAGGTGTCGTTGTCCGAGA+CGG 0.601013 4.2:-31971635 None:intergenic
ATTAGAAGGGGACGCGACTG+TGG 0.601574 4.2:-31971670 None:intergenic
GGATCAAATCAAATCCCAGT+TGG 0.605375 4.2:+31974537 MS.gene065894:CDS
CAAGGACTATGTCTTTGGAC+TGG 0.615367 4.2:-31977160 None:intergenic
GTGGAGCGTCGGAGAAAGCG+TGG 0.616705 4.2:-31973159 None:intergenic
GACGGATTCGTCCCAGATAG+CGG 0.617829 4.2:-31971617 None:intergenic
CGAGACAACGTGCCAGACCA+GGG 0.623935 4.2:-31975762 None:intergenic
TATCTGGGACGAATCCGTCT+CGG 0.624076 4.2:+31971621 MS.gene065894:CDS
CAGCAGGAATCTACACGACA+AGG 0.624501 4.2:+31975430 MS.gene065894:CDS
AGACGATGACAAAGAGTGCA+CGG 0.625918 4.2:-31971719 None:intergenic
GTGACAGCCTGCGACCCAAG+TGG 0.626851 4.2:-31976806 None:intergenic
CCAGGGGTATTTCGCTATGG+AGG 0.627482 4.2:-31975745 None:intergenic
ACGGCTGAATCGAGATCACC+GGG 0.629107 4.2:-31977200 None:intergenic
AGATTATGCATTGATGACCG+GGG 0.631842 4.2:+31976772 MS.gene065894:CDS
GAAGGTGCACGGGTTATATG+GGG 0.635807 4.2:+31975678 MS.gene065894:CDS
ACTGGTCACCGGTACGAGAG+AGG 0.638503 4.2:-31977142 None:intergenic
TTCTGGATCAAACCCAGCAG+AGG 0.639979 4.2:-31973248 None:intergenic
GAAGCTGCGGCTAACACCGA+GGG 0.640001 4.2:+31977413 MS.gene065894:CDS
AAGGGAAATAGCAAAACTGA+TGG 0.641440 4.2:+31977445 MS.gene065894:CDS
GGCAAATCTAATGCAGACTG+AGG 0.644071 4.2:+31974785 MS.gene065894:CDS
GTGAGAGAAACCAGATGCGG+CGG 0.645481 4.2:-31973134 None:intergenic
CGTGTCAGACCGTATTGATG+AGG 0.646444 4.2:+31977220 MS.gene065894:CDS
GATATCGCTACTTCACCTCA+TGG 0.648351 4.2:+31973301 MS.gene065894:CDS
CAGATTCTAGATCAGTACGT+CGG 0.653579 4.2:-31975803 None:intergenic
TCAAATCAGAGCTCAACATG+AGG 0.656936 4.2:+31973498 MS.gene065894:CDS
GATTATGCATTGATGACCGG+GGG 0.657162 4.2:+31976773 MS.gene065894:CDS
TCCAGGAACAGGAAAGACAA+TGG 0.664109 4.2:+31975962 MS.gene065894:CDS
AAAGAGTGCACGGACAGAGG+GGG 0.664535 4.2:-31971709 None:intergenic
TGTGCGCCCTATATTAGAAG+GGG 0.664910 4.2:-31971682 None:intergenic
AAACAACCTCAACTCAACAA+TGG 0.665030 4.2:+31973075 MS.gene065894:CDS
TGATATCATAAAGGAAGCTG+CGG 0.665829 4.2:+31977400 MS.gene065894:CDS
ATGGCAAAACCATACGCCGT+AGG 0.675111 4.2:+31973094 MS.gene065894:CDS
GATGGCGGAAAAGAAACCTA+CGG 0.681152 4.2:-31973110 None:intergenic
ACTTGTATTAACGCAAACTG+AGG 0.689232 4.2:+31974875 MS.gene065894:CDS
CTGTGGACATAAGAGTGGGG+AGG 0.703019 4.2:-31971653 None:intergenic
CTGAATCGAGATCACCGGGA+CGG 0.707761 4.2:-31977196 None:intergenic
AGTATAAGGATGAGTTGACG+AGG 0.710511 4.2:+31974563 MS.gene065894:CDS
GGAAGCTGCGGCTAACACCG+AGG 0.710666 4.2:+31977412 MS.gene065894:CDS
GAGACAACGTGCCAGACCAG+GGG 0.715193 4.2:-31975761 None:intergenic
GAGCGTCGGAGAAAGCGTGG+TGG 0.727613 4.2:-31973156 None:intergenic
CGACTGTGGACATAAGAGTG+GGG 0.737939 4.2:-31971656 None:intergenic
GTGGTGAGAGAAACCAGATG+CGG 0.753799 4.2:-31973137 None:intergenic
CAAAGAGTGCACGGACAGAG+GGG 0.756522 4.2:-31971710 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAATAAAAAAAAAATA+GGG - chr4.2:31972915-31972934 None:intergenic 0.0%
!! AATAAAAAATACATAACATA+TGG - chr4.2:31973550-31973569 None:intergenic 10.0%
!!! AAAGTTTAGTTTTTTAATTT+TGG + chr4.2:31974613-31974632 MS.gene065894:intron 10.0%
!!! TTGAATTACTTTTTTATTTA+GGG + chr4.2:31976413-31976432 MS.gene065894:intron 10.0%
!! AAATAAAAAAGAAAAGCAAA+AGG - chr4.2:31973372-31973391 None:intergenic 15.0%
!! AATAAAAAAGAAAAGCAAAA+GGG - chr4.2:31973371-31973390 None:intergenic 15.0%
!! ATTCTTGTATTATTATTGTA+AGG + chr4.2:31974656-31974675 MS.gene065894:intron 15.0%
!!! ATTCAATTTTTTAACTTTGA+AGG - chr4.2:31974382-31974401 None:intergenic 15.0%
!!! CTTTTTTTTTTTTTTGTTGA+AGG + chr4.2:31973405-31973424 MS.gene065894:intron 15.0%
!!! GTTGAATTACTTTTTTATTT+AGG + chr4.2:31976412-31976431 MS.gene065894:intron 15.0%
!!! TAAAGATAGAAATATTTTCT+TGG - chr4.2:31972853-31972872 None:intergenic 15.0%
!!! TATATTTCTAGAATCAATTT+TGG + chr4.2:31973903-31973922 MS.gene065894:intron 15.0%
!!! TCTTAATTTTAGTATGTTTT+TGG + chr4.2:31973581-31973600 MS.gene065894:intron 15.0%
!!! TGAATTACTTTTTTATTTAG+GGG + chr4.2:31976414-31976433 MS.gene065894:intron 15.0%
!!! TTTTAAAAAGAAATTTCATG+TGG + chr4.2:31975122-31975141 MS.gene065894:intron 15.0%
!! AAAACTTATGAAAAGGAAAA+TGG - chr4.2:31976276-31976295 None:intergenic 20.0%
!! AAAATCAATAATGTATGTTC+GGG + chr4.2:31974111-31974130 MS.gene065894:intron 20.0%
!! AAACTTCTCCTTTAATTATT+TGG + chr4.2:31976637-31976656 MS.gene065894:intron 20.0%
!! AAAGATGGTACTTATAATAA+GGG - chr4.2:31976577-31976596 None:intergenic 20.0%
!! AAATAATTAAAGGAGAAGTT+TGG - chr4.2:31976638-31976657 None:intergenic 20.0%
!! AATTAGTAATGTAGTACTTT+GGG + chr4.2:31975203-31975222 MS.gene065894:intron 20.0%
!! CAATGAAATTAGTTAGAAAT+TGG - chr4.2:31972111-31972130 None:intergenic 20.0%
!! CATAAGTTAAGAAACTAAAA+AGG + chr4.2:31972759-31972778 MS.gene065894:intron 20.0%
!! GAAAATCAATAATGTATGTT+CGG + chr4.2:31974110-31974129 MS.gene065894:intron 20.0%
!! TAAAGATGGTACTTATAATA+AGG - chr4.2:31976578-31976597 None:intergenic 20.0%
!! TAACTCTTTATCAACTAAAA+TGG + chr4.2:31972583-31972602 MS.gene065894:intron 20.0%
!! TAAGTTAGAAACAGAAAAAT+GGG + chr4.2:31974929-31974948 MS.gene065894:CDS 20.0%
!! TAATTAGTAATGTAGTACTT+TGG + chr4.2:31975202-31975221 MS.gene065894:intron 20.0%
!! TATACACACTATTAATGATT+CGG - chr4.2:31975096-31975115 None:intergenic 20.0%
!! TATGTATGAAATTGTAAAGA+TGG - chr4.2:31976592-31976611 None:intergenic 20.0%
!! TGATGAAATTACTTAGAAAT+TGG - chr4.2:31971942-31971961 None:intergenic 20.0%
!! TGATGAAATTAGTTAGAAAT+TGG - chr4.2:31972280-31972299 None:intergenic 20.0%
!!! ATTATTGATTTTCACATGTT+TGG - chr4.2:31974103-31974122 None:intergenic 20.0%
!!! ATTTTAAGTTCTTGATTCTT+TGG + chr4.2:31976370-31976389 MS.gene065894:intron 20.0%
!!! GTTTAAATTTTATGCTGTAA+TGG + chr4.2:31976187-31976206 MS.gene065894:intron 20.0%
!!! TATTTTGTCTCATTTTTGTT+TGG + chr4.2:31976733-31976752 MS.gene065894:intron 20.0%
!!! TCTAAAATAATCTGTTTTCA+AGG + chr4.2:31976307-31976326 MS.gene065894:intron 20.0%
!!! TTATTGATTTTCACATGTTT+GGG - chr4.2:31974102-31974121 None:intergenic 20.0%
!!! TTTTTTTCTCTCTATTGTTT+TGG - chr4.2:31972433-31972452 None:intergenic 20.0%
! AAAATGAAAGTTGTCACAAA+TGG - chr4.2:31972394-31972413 None:intergenic 25.0%
! AAGATGGTACTTATAATAAG+GGG - chr4.2:31976576-31976595 None:intergenic 25.0%
! AATATCGGTAAAAAAGAACA+AGG - chr4.2:31975540-31975559 None:intergenic 25.0%
! AATGACTGATGATATCATAA+AGG + chr4.2:31977391-31977410 MS.gene065894:CDS 25.0%
! ATTAATGAGTAAACAACATC+AGG - chr4.2:31975186-31975205 None:intergenic 25.0%
! ATTAGTAATGTAGTACTTTG+GGG + chr4.2:31975204-31975223 MS.gene065894:intron 25.0%
! CTAAGTTAGAAACAGAAAAA+TGG + chr4.2:31974928-31974947 MS.gene065894:CDS 25.0%
! CTGATCTTAATAACAGAATT+GGG + chr4.2:31975868-31975887 MS.gene065894:CDS 25.0%
! GCTTCTTTCCAAATAATTAA+AGG - chr4.2:31976648-31976667 None:intergenic 25.0%
! GTTAAGAATAAGTGTATGTT+TGG + chr4.2:31973650-31973669 MS.gene065894:intron 25.0%
! TAATGTTTATGTTGAACTCT+AGG - chr4.2:31971846-31971865 None:intergenic 25.0%
! TCAGTTGAAAACTTATGAAA+AGG - chr4.2:31976283-31976302 None:intergenic 25.0%
! TGAGAATATTAAAAAGAGAG+AGG + chr4.2:31973432-31973451 MS.gene065894:CDS 25.0%
! TGGAAAGAAGCTTATATTTA+TGG + chr4.2:31976657-31976676 MS.gene065894:intron 25.0%
! TTAAGTAGAATCAATTCTTG+AGG + chr4.2:31973833-31973852 MS.gene065894:intron 25.0%
! TTGACAATCTTAAAAGACAA+CGG + chr4.2:31975030-31975049 MS.gene065894:intron 25.0%
! TTTAAACTTCACTAGAACAT+AGG - chr4.2:31976174-31976193 None:intergenic 25.0%
!! AGACTGAATTTTCAAACATA+GGG - chr4.2:31975330-31975349 None:intergenic 25.0%
!! CAACTTCTTTAAAAAAAGAG+TGG + chr4.2:31972354-31972373 MS.gene065894:intron 25.0%
!! CTTTTATCTCTATCTTTTGT+GGG - chr4.2:31977370-31977389 None:intergenic 25.0%
!! GGATATGTTGATAGAATATT+GGG + chr4.2:31975699-31975718 MS.gene065894:CDS 25.0%
!! GTTTAAAATACTATCTACCT+TGG + chr4.2:31976099-31976118 MS.gene065894:intron 25.0%
!! TAAAAAAGCATGTTTCTGAA+TGG - chr4.2:31975936-31975955 None:intergenic 25.0%
!! TAGACTGAATTTTCAAACAT+AGG - chr4.2:31975331-31975350 None:intergenic 25.0%
!! TAGTATGTTTGAGTTTAATG+TGG - chr4.2:31971902-31971921 None:intergenic 25.0%
!! TCAAAAGTCAGAAATGATTT+TGG + chr4.2:31975828-31975847 MS.gene065894:CDS 25.0%
!! TTGAGTGTAAAAATCACTTT+TGG + chr4.2:31974004-31974023 MS.gene065894:intron 25.0%
!!! ACATAACATATGGTTTTACT+AGG - chr4.2:31973540-31973559 None:intergenic 25.0%
!!! GATAGTATTTTAAACTTCTC+TGG - chr4.2:31976094-31976113 None:intergenic 25.0%
!!! GTGAAATGTTAGCTTTTTTA+GGG - chr4.2:31972335-31972354 None:intergenic 25.0%
!!! GTTTTTGAGTGAATTGATTA+TGG + chr4.2:31973692-31973711 MS.gene065894:intron 25.0%
!!! TGTGAAATGTTAGCTTTTTT+AGG - chr4.2:31972336-31972355 None:intergenic 25.0%
!!! TTCAGAAACATGCTTTTTTA+TGG + chr4.2:31975936-31975955 MS.gene065894:CDS 25.0%
!!! TTTAAACTTCTCTAGAACAT+AGG - chr4.2:31976130-31976149 None:intergenic 25.0%
!!! TTTTTCTGTTTCTAACTTAG+CGG - chr4.2:31974928-31974947 None:intergenic 25.0%
AAAATGAACAAAAGAGAGCA+AGG + chr4.2:31974682-31974701 MS.gene065894:CDS 30.0%
AGATACACCAATTGTTTGAT+TGG + chr4.2:31976831-31976850 MS.gene065894:CDS 30.0%
AGCACAAAAAAACAACTGTA+AGG - chr4.2:31976507-31976526 None:intergenic 30.0%
AGTATGAAACACTAGAAAAC+TGG - chr4.2:31976047-31976066 None:intergenic 30.0%
ATGGTCAAAAGTAGCATTTA+TGG - chr4.2:31974961-31974980 None:intergenic 30.0%
ATTGAGTTTACAAACACACT+AGG - chr4.2:31976352-31976371 None:intergenic 30.0%
CATTCAACTTAGTGTATGTT+TGG - chr4.2:31973946-31973965 None:intergenic 30.0%
CCAATTCTGTTATTAAGATC+AGG - chr4.2:31975870-31975889 None:intergenic 30.0%
CCACAAAAGATAGAGATAAA+AGG + chr4.2:31977368-31977387 MS.gene065894:CDS 30.0%
CCTGATCTTAATAACAGAAT+TGG + chr4.2:31975867-31975886 MS.gene065894:CDS 30.0%
CTAGAACATAGGAAAAATCA+AGG - chr4.2:31976119-31976138 None:intergenic 30.0%
CTTCTATTTAGAGACAAAAG+TGG + chr4.2:31976704-31976723 MS.gene065894:intron 30.0%
CTTTATAATCAATCACTTCG+CGG - chr4.2:31977529-31977548 None:intergenic 30.0%
GAGTCAAAATCAATTCCAAT+TGG + chr4.2:31974071-31974090 MS.gene065894:intron 30.0%
GATACACCAATTGTTTGATT+GGG + chr4.2:31976832-31976851 MS.gene065894:CDS 30.0%
GCACAAAAAAACAACTGTAA+GGG - chr4.2:31976506-31976525 None:intergenic 30.0%
GTAAAAATGTACCTCCAATA+TGG - chr4.2:31974980-31974999 None:intergenic 30.0%
TAAACTATGAGATGACTTGA+AGG - chr4.2:31974283-31974302 None:intergenic 30.0%
TAAACTTCTTAAGCTCTATC+TGG + chr4.2:31977280-31977299 MS.gene065894:CDS 30.0%
TAGTCGAGTAAAAACACTAA+TGG - chr4.2:31975280-31975299 None:intergenic 30.0%
TATGAATGGAAGAATGAGAA+GGG - chr4.2:31973348-31973367 None:intergenic 30.0%
TATGAGGAAAAAAAGAAGCT+TGG + chr4.2:31974505-31974524 MS.gene065894:CDS 30.0%
TCGTAAGACAATCAAAGTAA+AGG + chr4.2:31974827-31974846 MS.gene065894:CDS 30.0%
TGAGGCAAATTCAATTATGT+TGG + chr4.2:31973851-31973870 MS.gene065894:intron 30.0%
TTAGTCCAAAGACTATTGAA+AGG + chr4.2:31977341-31977360 MS.gene065894:CDS 30.0%
TTGAGTTTACAAACACACTA+GGG - chr4.2:31976351-31976370 None:intergenic 30.0%
! AAAAGCATATGCTTGATGAT+TGG - chr4.2:31972710-31972729 None:intergenic 30.0%
! AAATTCAGTCTATCTTTTGC+AGG + chr4.2:31975339-31975358 MS.gene065894:intron 30.0%
! AATTCAACATTTTTGCCATG+AGG - chr4.2:31973319-31973338 None:intergenic 30.0%
! AATTCAGTCTATCTTTTGCA+GGG + chr4.2:31975340-31975359 MS.gene065894:intron 30.0%
! CATACACTAAGTTGAATGTT+TGG + chr4.2:31973948-31973967 MS.gene065894:intron 30.0%
! CCTTTTATCTCTATCTTTTG+TGG - chr4.2:31977371-31977390 None:intergenic 30.0%
! GAGCATTTGAAGTTGAATAT+CGG - chr4.2:31975555-31975574 None:intergenic 30.0%
! GGGATATGTTGATAGAATAT+TGG + chr4.2:31975698-31975717 MS.gene065894:CDS 30.0%
! GTGTAGGGTGTATAATTTTT+GGG - chr4.2:31973003-31973022 None:intergenic 30.0%
! TGTGTAGGGTGTATAATTTT+TGG - chr4.2:31973004-31973023 None:intergenic 30.0%
! TTAGATTATGCATTGATGAC+CGG + chr4.2:31976770-31976789 MS.gene065894:CDS 30.0%
! TTCATTTTCTCTCTTCTCAT+TGG + chr4.2:31972406-31972425 MS.gene065894:intron 30.0%
! TTGATGATTGGCAAAGTATA+TGG - chr4.2:31972698-31972717 None:intergenic 30.0%
! TTGCATTGGGTAAATTTTAC+AGG + chr4.2:31977069-31977088 MS.gene065894:intron 30.0%
!! AAATGTTAACTTGTGTCATG+AGG - chr4.2:31972892-31972911 None:intergenic 30.0%
!! ATTAGTGTTTTTACTCGACT+AGG + chr4.2:31975279-31975298 MS.gene065894:intron 30.0%
!! TTATGTTAACTTGTGCCTTT+GGG + chr4.2:31972735-31972754 MS.gene065894:intron 30.0%
!!! AATGCTACTTTTGACCATAT+TGG + chr4.2:31974963-31974982 MS.gene065894:CDS 30.0%
AAACAACCTCAACTCAACAA+TGG + chr4.2:31973075-31973094 MS.gene065894:CDS 35.0%
AAGGGAAATAGCAAAACTGA+TGG + chr4.2:31977445-31977464 MS.gene065894:CDS 35.0%
AATAGTCTTTGGACTAAACC+AGG - chr4.2:31977338-31977357 None:intergenic 35.0%
ACATTGGACTTGATGTTTGT+AGG + chr4.2:31975655-31975674 MS.gene065894:intron 35.0%
ACTTGTATTAACGCAAACTG+AGG + chr4.2:31974875-31974894 MS.gene065894:CDS 35.0%
AGAGAAAACAGTTGAAATGC+TGG - chr4.2:31974462-31974481 None:intergenic 35.0%
ATCCTTATACTTAGCCAACT+GGG - chr4.2:31974554-31974573 None:intergenic 35.0%
CAAAATTGCAGATGAGTACA+TGG - chr4.2:31972945-31972964 None:intergenic 35.0%
CATTGGACTTGATGTTTGTA+GGG + chr4.2:31975656-31975675 MS.gene065894:intron 35.0%
CTAATGAGCTACTGAAAATG+AGG + chr4.2:31975474-31975493 MS.gene065894:intron 35.0%
CTAGAACATAGGAAAAACCA+AGG - chr4.2:31976163-31976182 None:intergenic 35.0%
CTGGAACATAGAAAAAACCA+AGG - chr4.2:31976075-31976094 None:intergenic 35.0%
CTTGTCTTGATCTGTTAGAA+TGG - chr4.2:31975376-31975395 None:intergenic 35.0%
GAGACAAAGGATTACATATG+AGG + chr4.2:31974489-31974508 MS.gene065894:CDS 35.0%
GATGTTAAGTATCATGCTCT+GGG + chr4.2:31976447-31976466 MS.gene065894:intron 35.0%
GCATCAACAGAGAAGAAAAT+TGG + chr4.2:31977556-31977575 MS.gene065894:CDS 35.0%
GGCAAATTCAATTATGTTGG+AGG + chr4.2:31973854-31973873 MS.gene065894:intron 35.0%
GGTTTCCTTTCAATAGTCTT+TGG - chr4.2:31977349-31977368 None:intergenic 35.0%
GTAAACTTACGTATTCTTGC+TGG + chr4.2:31972964-31972983 MS.gene065894:intron 35.0%
GTATGAATGGAAGAATGAGA+AGG - chr4.2:31973349-31973368 None:intergenic 35.0%
GTGTTTCATACTATCTACCT+TGG + chr4.2:31976055-31976074 MS.gene065894:intron 35.0%
TCATGCAGCTAGAACTTATA+AGG - chr4.2:31974323-31974342 None:intergenic 35.0%
TGATATCATAAAGGAAGCTG+CGG + chr4.2:31977400-31977419 MS.gene065894:CDS 35.0%
TGCAATAGAAGAACAGATTC+AGG + chr4.2:31974764-31974783 MS.gene065894:CDS 35.0%
TTCAAACATAGGGATTTGTG+TGG - chr4.2:31975320-31975339 None:intergenic 35.0%
TTTCTTAACTTATGCCCCAA+AGG - chr4.2:31972753-31972772 None:intergenic 35.0%
! ATGTTTGGTTTCACTTCTAG+AGG - chr4.2:31973931-31973950 None:intergenic 35.0%
! ATTCAGTCTATCTTTTGCAG+GGG + chr4.2:31975341-31975360 MS.gene065894:intron 35.0%
! CATTGGGTAAATTTTACAGG+CGG + chr4.2:31977072-31977091 MS.gene065894:intron 35.0%
! GAAAAGCAAAAGGGTATGAA+TGG - chr4.2:31973362-31973381 None:intergenic 35.0%
! TAGATTATGCATTGATGACC+GGG + chr4.2:31976771-31976790 MS.gene065894:CDS 35.0%
! TGCGTAGTTTGTATTCACAT+TGG + chr4.2:31975639-31975658 MS.gene065894:intron 35.0%
! TTTCAACTGTTTTCTCTTGC+AGG + chr4.2:31974465-31974484 MS.gene065894:intron 35.0%
!! ATTCTAGGACCTCATCAATA+CGG - chr4.2:31977232-31977251 None:intergenic 35.0%
!! GGATTGTTGTTTCGGAATTT+GGG - chr4.2:31973220-31973239 None:intergenic 35.0%
!! GTTATGTTAACTTGTGCCTT+TGG + chr4.2:31972734-31972753 MS.gene065894:intron 35.0%
!! TAGTTCTGGGATTGTTGTTT+CGG - chr4.2:31973228-31973247 None:intergenic 35.0%
!! TATGTTAACTTGTGCCTTTG+GGG + chr4.2:31972736-31972755 MS.gene065894:intron 35.0%
!! TTTAGTGATGGGTTTGTGTA+GGG - chr4.2:31973018-31973037 None:intergenic 35.0%
!! TTTTGTTTGGATACACTGCA+GGG + chr4.2:31976746-31976765 MS.gene065894:intron 35.0%
!! TTTTTGTTTGGATACACTGC+AGG + chr4.2:31976745-31976764 MS.gene065894:intron 35.0%
!!! AACCTTTTTTTCCTCTTTGG+AGG - chr4.2:31976980-31976999 None:intergenic 35.0%
!!! GAGTTGAGGTTGTTTTTGTT+GGG - chr4.2:31973070-31973089 None:intergenic 35.0%
!!! TAAACCCCTTTTTGACTTCT+TGG - chr4.2:31976858-31976877 None:intergenic 35.0%
!!! TGAGTTGAGGTTGTTTTTGT+TGG - chr4.2:31973071-31973090 None:intergenic 35.0%
!!! TGCAACCTTTTTTTCCTCTT+TGG - chr4.2:31976983-31977002 None:intergenic 35.0%
!!! TTTTAGTGATGGGTTTGTGT+AGG - chr4.2:31973019-31973038 None:intergenic 35.0%
AAGTTAGTTGTAGCAGTTGG+TGG + chr4.2:31975393-31975412 MS.gene065894:CDS 40.0%
ACAGTTTCCAACTGTGTGTT+TGG - chr4.2:31974165-31974184 None:intergenic 40.0%
ACCAAGCGAATTGATTGCAT+TGG + chr4.2:31977055-31977074 MS.gene065894:intron 40.0%
AGATTCTAGATCAGTACGTC+GGG - chr4.2:31975805-31975824 None:intergenic 40.0%
AGCTAGAACTTATAAGGCGA+TGG - chr4.2:31974317-31974336 None:intergenic 40.0%
AGTGTGCACGATTAGGAAAA+CGG - chr4.2:31974189-31974208 None:intergenic 40.0%
ATATGTCTAGCAACCCAAAC+AGG - chr4.2:31971761-31971780 None:intergenic 40.0%
ATCCCAGTTGGCTAAGTATA+AGG + chr4.2:31974549-31974568 MS.gene065894:CDS 40.0%
ATTGGGCCAAGAAGTCAAAA+AGG + chr4.2:31976849-31976868 MS.gene065894:CDS 40.0%
CAACAGAGAAGAAAATTGGC+AGG + chr4.2:31977560-31977579 MS.gene065894:CDS 40.0%
CACCTCCAAAGAGGAAAAAA+AGG + chr4.2:31976975-31976994 MS.gene065894:intron 40.0%
CAGATTCTAGATCAGTACGT+CGG - chr4.2:31975806-31975825 None:intergenic 40.0%
CATCCTTATACTTAGCCAAC+TGG - chr4.2:31974555-31974574 None:intergenic 40.0%
CCAAGCGAATTGATTGCATT+GGG + chr4.2:31977056-31977075 MS.gene065894:intron 40.0%
CGATGTTAAGTATCATGCTC+TGG + chr4.2:31976446-31976465 MS.gene065894:intron 40.0%
CGGTAAAAAAGAACAAGGCT+TGG - chr4.2:31975535-31975554 None:intergenic 40.0%
CTACTGAAAATGAGGAAGGT+GGG + chr4.2:31975482-31975501 MS.gene065894:intron 40.0%
GACAAGTTAGTTGTAGCAGT+TGG + chr4.2:31975390-31975409 MS.gene065894:CDS 40.0%
GGATCAAATCAAATCCCAGT+TGG + chr4.2:31974537-31974556 MS.gene065894:CDS 40.0%
GGCAGAGGTAGTATATCTAA+AGG - chr4.2:31976555-31976574 None:intergenic 40.0%
GTACTTATAATAAGGGGCAG+AGG - chr4.2:31976570-31976589 None:intergenic 40.0%
TAATAACAGAATTGGGCAGC+TGG + chr4.2:31975875-31975894 MS.gene065894:CDS 40.0%
TAATCGTGCACACTTTGCAT+GGG + chr4.2:31974195-31974214 MS.gene065894:intron 40.0%
TCAAATCAGAGCTCAACATG+AGG + chr4.2:31973498-31973517 MS.gene065894:CDS 40.0%
TCAATTCGCTTGGTCAACTT+TGG - chr4.2:31977049-31977068 None:intergenic 40.0%
TCTTGGCCCAATCAAACAAT+TGG - chr4.2:31976841-31976860 None:intergenic 40.0%
TGAAGTAGCGATATCGTGTA+GGG - chr4.2:31973296-31973315 None:intergenic 40.0%
TGAGCTACTGAAAATGAGGA+AGG + chr4.2:31975478-31975497 MS.gene065894:intron 40.0%
TGTGAAACCAAACACACAGT+TGG + chr4.2:31974155-31974174 MS.gene065894:intron 40.0%
TTGGGCCAAGAAGTCAAAAA+GGG + chr4.2:31976850-31976869 MS.gene065894:CDS 40.0%
TTGTGCGCCCTATATTAGAA+GGG - chr4.2:31971686-31971705 None:intergenic 40.0%
TTTATATCGCTCGTCTTCTC+CGG - chr4.2:31977264-31977283 None:intergenic 40.0%
! AGATTATGCATTGATGACCG+GGG + chr4.2:31976772-31976791 MS.gene065894:CDS 40.0%
! AGGTTTTCTTGATCCAGCTT+GGG - chr4.2:31977318-31977337 None:intergenic 40.0%
! AGTATAAGGATGAGTTGACG+AGG + chr4.2:31974563-31974582 MS.gene065894:CDS 40.0%
! GTGTGTTTGGTTTCACAACA+GGG - chr4.2:31974152-31974171 None:intergenic 40.0%
! TGTGTGTTTGGTTTCACAAC+AGG - chr4.2:31974153-31974172 None:intergenic 40.0%
! TTCAGTCTATCTTTTGCAGG+GGG + chr4.2:31975342-31975361 MS.gene065894:intron 40.0%
!! GAGTTGAGGGTTTTAGTGAT+GGG - chr4.2:31973029-31973048 None:intergenic 40.0%
!! GGGATTGTTGTTTCGGAATT+TGG - chr4.2:31973221-31973240 None:intergenic 40.0%
!! GTTTTGCCATTGTTGAGTTG+AGG - chr4.2:31973084-31973103 None:intergenic 40.0%
!! TTGTTGTTTCGGAATTTGGG+TGG - chr4.2:31973217-31973236 None:intergenic 40.0%
!!! GCTACTTTTGACCATATTGG+AGG + chr4.2:31974966-31974985 MS.gene065894:CDS 40.0%
!!! GTTGTTTTTGTTGGGAGCTA+AGG - chr4.2:31973062-31973081 None:intergenic 40.0%
AAAGAAGCTTGGACAGCTTC+AGG + chr4.2:31974516-31974535 MS.gene065894:CDS 45.0%
AACCCAAACAGGCAGATACT+TGG - chr4.2:31971750-31971769 None:intergenic 45.0%
AAGGGCAAGGACTATGTCTT+TGG - chr4.2:31977168-31977187 None:intergenic 45.0%
AAGGTTTAACAGCGGAGTTG+AGG - chr4.2:31973043-31973062 None:intergenic 45.0%
ACAAGCTGAATTCGCTGCAA+AGG + chr4.2:31973462-31973481 MS.gene065894:CDS 45.0%
AGGTTTAACAGCGGAGTTGA+GGG - chr4.2:31973042-31973061 None:intergenic 45.0%
ATTGTCTTTCCTGTTCCTGG+AGG - chr4.2:31975963-31975982 None:intergenic 45.0%
CAAGCTGGATCAAGAAAACC+TGG + chr4.2:31977317-31977336 MS.gene065894:CDS 45.0%
CAAGGACTATGTCTTTGGAC+TGG - chr4.2:31977163-31977182 None:intergenic 45.0%
CAATCAAACTGCAGCAAGCT+CGG + chr4.2:31974739-31974758 MS.gene065894:CDS 45.0%
CATGCAAAGTGTGCACGATT+AGG - chr4.2:31974196-31974215 None:intergenic 45.0%
CATGTTTGGGTGATGCCAAT+TGG - chr4.2:31974089-31974108 None:intergenic 45.0%
CCAAGAGCTAGTGAAAATGC+AGG + chr4.2:31974707-31974726 MS.gene065894:CDS 45.0%
CCCAATGCAATCAATTCGCT+TGG - chr4.2:31977059-31977078 None:intergenic 45.0%
CGCAAACTGAGGATGTTAGA+AGG + chr4.2:31974886-31974905 MS.gene065894:CDS 45.0%
CTAATCGTGCACACTTTGCA+TGG + chr4.2:31974194-31974213 MS.gene065894:intron 45.0%
CTCATCAATACGGTCTGACA+CGG - chr4.2:31977222-31977241 None:intergenic 45.0%
GAAAAGAAACCTACGGCGTA+TGG - chr4.2:31973106-31973125 None:intergenic 45.0%
GATATCGCTACTTCACCTCA+TGG + chr4.2:31973301-31973320 MS.gene065894:CDS 45.0%
GCTACTGAAAATGAGGAAGG+TGG + chr4.2:31975481-31975500 MS.gene065894:intron 45.0%
GGACTTGATGTTTGTAGGGA+AGG + chr4.2:31975660-31975679 MS.gene065894:intron 45.0%
GGCAAATCTAATGCAGACTG+AGG + chr4.2:31974785-31974804 MS.gene065894:CDS 45.0%
GTCAGTATGCACTGTGCAAA+TGG + chr4.2:31975002-31975021 MS.gene065894:intron 45.0%
GTCCTAGAATTTCCCTTACC+CGG + chr4.2:31977242-31977261 MS.gene065894:CDS 45.0%
GTGAAGTAGCGATATCGTGT+AGG - chr4.2:31973297-31973316 None:intergenic 45.0%
GTTGTGCGCCCTATATTAGA+AGG - chr4.2:31971687-31971706 None:intergenic 45.0%
TCCAGGAACAGGAAAGACAA+TGG + chr4.2:31975962-31975981 MS.gene065894:CDS 45.0%
TCGCGTCCCCTTCTAATATA+GGG + chr4.2:31971676-31971695 MS.gene065894:CDS 45.0%
TGCCAAGTATCTGCCTGTTT+GGG + chr4.2:31971745-31971764 MS.gene065894:intron 45.0%
TGGGACAACCATCATTGATC+CGG + chr4.2:31975718-31975737 MS.gene065894:CDS 45.0%
TGGGAGCTAAGGTTTAACAG+CGG - chr4.2:31973051-31973070 None:intergenic 45.0%
TGGGCCAAGAAGTCAAAAAG+GGG + chr4.2:31976851-31976870 MS.gene065894:CDS 45.0%
TGTGCGCCCTATATTAGAAG+GGG - chr4.2:31971685-31971704 None:intergenic 45.0%
TTATATCGCTCGTCTTCTCC+GGG - chr4.2:31977263-31977282 None:intergenic 45.0%
TTCCCTTCCAGAAAATCCCT+CGG - chr4.2:31977432-31977451 None:intergenic 45.0%
TTCTCTTGCAGGAGAGACAA+AGG + chr4.2:31974476-31974495 MS.gene065894:intron 45.0%
TTGCCAAGTATCTGCCTGTT+TGG + chr4.2:31971744-31971763 MS.gene065894:intron 45.0%
TTGTCTTTCCTGTTCCTGGA+GGG - chr4.2:31975962-31975981 None:intergenic 45.0%
TTGTTTCGGAATTTGGGTGG+CGG - chr4.2:31973214-31973233 None:intergenic 45.0%
! AGACGATGACAAAGAGTGCA+CGG - chr4.2:31971722-31971741 None:intergenic 45.0%
! AGCGATATCGTGTAGGGTTT+TGG - chr4.2:31973290-31973309 None:intergenic 45.0%
! ATGTTTGTAGGGAAGGTGCA+CGG + chr4.2:31975667-31975686 MS.gene065894:intron 45.0%
! CAGGTTTTCTTGATCCAGCT+TGG - chr4.2:31977319-31977338 None:intergenic 45.0%
! GATTATGCATTGATGACCGG+GGG + chr4.2:31976773-31976792 MS.gene065894:CDS 45.0%
!! CCTGCATTTTCACTAGCTCT+TGG - chr4.2:31974710-31974729 None:intergenic 45.0%
!! GATGGCGGAAAAGAAACCTA+CGG - chr4.2:31973113-31973132 None:intergenic 45.0%
!! GGAGTTGAGGGTTTTAGTGA+TGG - chr4.2:31973030-31973049 None:intergenic 45.0%
!! TATGTCTTTGGACTGGTCAC+CGG - chr4.2:31977156-31977175 None:intergenic 45.0%
!!! ATGCTTTTTTATGGCCCTCC+AGG + chr4.2:31975945-31975964 MS.gene065894:CDS 45.0%
!! GAAAAAAATAAAAAAAAAAT+AGG - chr4.2:31972916-31972935 None:intergenic 5.0%
AAACCCAGCAGAGGTAGTTC+TGG - chr4.2:31973242-31973261 None:intergenic 50.0%
AACCCAGCAGAGGTAGTTCT+GGG - chr4.2:31973241-31973260 None:intergenic 50.0%
AATCCCAGAACTACCTCTGC+TGG + chr4.2:31973235-31973254 MS.gene065894:CDS 50.0%
ACTCTCTTTCTCCTTGCCTG+CGG + chr4.2:31976949-31976968 MS.gene065894:intron 50.0%
AGATCTACGAGCCAACTCTC+TGG - chr4.2:31975991-31976010 None:intergenic 50.0%
AGCTGCTGTGTATGGAAGCA+AGG + chr4.2:31977478-31977497 MS.gene065894:CDS 50.0%
AGTGTCCAAGCTGCTGTGTA+TGG + chr4.2:31977470-31977489 MS.gene065894:CDS 50.0%
ATAGCGAAATACCCCTGGTC+TGG + chr4.2:31975750-31975769 MS.gene065894:CDS 50.0%
ATCCCAGAACTACCTCTGCT+GGG + chr4.2:31973236-31973255 MS.gene065894:CDS 50.0%
ATGGCAAAACCATACGCCGT+AGG + chr4.2:31973094-31973113 MS.gene065894:CDS 50.0%
ATTTCGCTATGGAGGACTCC+CGG - chr4.2:31975740-31975759 None:intergenic 50.0%
CAGCAGGAATCTACACGACA+AGG + chr4.2:31975430-31975449 MS.gene065894:CDS 50.0%
CGACTGTGGACATAAGAGTG+GGG - chr4.2:31971659-31971678 None:intergenic 50.0%
CTCCGGGTAAGGGAAATTCT+AGG - chr4.2:31977247-31977266 None:intergenic 50.0%
GACAAGTACATTGCCCAAGC+TGG + chr4.2:31977302-31977321 MS.gene065894:CDS 50.0%
GATCCAGAACCTCTCGTCAA+AGG + chr4.2:31973262-31973281 MS.gene065894:CDS 50.0%
GCCATTGTCTTTCCTGTTCC+TGG - chr4.2:31975966-31975985 None:intergenic 50.0%
GCGACTGTGGACATAAGAGT+GGG - chr4.2:31971660-31971679 None:intergenic 50.0%
GGGACAACCATCATTGATCC+GGG + chr4.2:31975719-31975738 MS.gene065894:CDS 50.0%
GTCGCGTCCCCTTCTAATAT+AGG + chr4.2:31971675-31971694 MS.gene065894:CDS 50.0%
GTGGTGAGAGAAACCAGATG+CGG - chr4.2:31973140-31973159 None:intergenic 50.0%
TAGATCAGTACGTCGGGACA+GGG - chr4.2:31975799-31975818 None:intergenic 50.0%
TCACTTCGCGGAACAAGCTT+TGG - chr4.2:31977517-31977536 None:intergenic 50.0%
TGCTTCCATACACAGCAGCT+TGG - chr4.2:31977478-31977497 None:intergenic 50.0%
TTCTGGATCAAACCCAGCAG+AGG - chr4.2:31973251-31973270 None:intergenic 50.0%
TTGTGTAGGGTCCGCTATCT+GGG + chr4.2:31971606-31971625 MS.gene065894:CDS 50.0%
! ACAAAGAGTGCACGGACAGA+GGG - chr4.2:31971714-31971733 None:intergenic 50.0%
! ACACCGAGGGATTTTCTGGA+AGG + chr4.2:31977426-31977445 MS.gene065894:CDS 50.0%
! AGGATGAGTTGACGAGGAAG+AGG + chr4.2:31974569-31974588 MS.gene065894:CDS 50.0%
! CGTGTCAGACCGTATTGATG+AGG + chr4.2:31977220-31977239 MS.gene065894:CDS 50.0%
! GAAGGTGCACGGGTTATATG+GGG + chr4.2:31975678-31975697 MS.gene065894:CDS 50.0%
! GCTAACACCGAGGGATTTTC+TGG + chr4.2:31977422-31977441 MS.gene065894:CDS 50.0%
! GGAAGGTGCACGGGTTATAT+GGG + chr4.2:31975677-31975696 MS.gene065894:CDS 50.0%
! TATCTGGGACGAATCCGTCT+CGG + chr4.2:31971621-31971640 MS.gene065894:CDS 50.0%
! TGTTTGTAGGGAAGGTGCAC+GGG + chr4.2:31975668-31975687 MS.gene065894:intron 50.0%
! TTTTATGGCCCTCCAGGAAC+AGG + chr4.2:31975951-31975970 MS.gene065894:CDS 50.0%
!! AGACCAGGGGTATTTCGCTA+TGG - chr4.2:31975751-31975770 None:intergenic 50.0%
!! AGTTGGTGGAGTTACTGCTC+TGG + chr4.2:31975407-31975426 MS.gene065894:CDS 50.0%
!! CACCGAGGGATTTTCTGGAA+GGG + chr4.2:31977427-31977446 MS.gene065894:CDS 50.0%
!!! GTTTTGGCTCCTTTGACGAG+AGG - chr4.2:31973274-31973293 None:intergenic 50.0%
AATGCGCTCCTCTCTCGTAC+CGG + chr4.2:31977134-31977153 MS.gene065894:CDS 55.0%
ACGGCTGAATCGAGATCACC+GGG - chr4.2:31977203-31977222 None:intergenic 55.0%
ATTAGAAGGGGACGCGACTG+TGG - chr4.2:31971673-31971692 None:intergenic 55.0%
CACGGCTGAATCGAGATCAC+CGG - chr4.2:31977204-31977223 None:intergenic 55.0%
CCTCCATAGCGAAATACCCC+TGG + chr4.2:31975745-31975764 MS.gene065894:CDS 55.0%
CGCGACTGTGGACATAAGAG+TGG - chr4.2:31971661-31971680 None:intergenic 55.0%
CTAGATCAGTACGTCGGGAC+AGG - chr4.2:31975800-31975819 None:intergenic 55.0%
CTGAATCGAGATCACCGGGA+CGG - chr4.2:31977199-31977218 None:intergenic 55.0%
CTGTGGACATAAGAGTGGGG+AGG - chr4.2:31971656-31971675 None:intergenic 55.0%
GACAATGGCTGCCAGAGAGT+TGG + chr4.2:31975977-31975996 MS.gene065894:CDS 55.0%
GAGGACTCCCGGATCAATGA+TGG - chr4.2:31975729-31975748 None:intergenic 55.0%
GCTCCTTTGACGAGAGGTTC+TGG - chr4.2:31973268-31973287 None:intergenic 55.0%
GTGAGAGAAACCAGATGCGG+CGG - chr4.2:31973137-31973156 None:intergenic 55.0%
GTTGACGAGGAAGAGGATGC+AGG + chr4.2:31974576-31974595 MS.gene065894:CDS 55.0%
GTTGTGTAGGGTCCGCTATC+TGG + chr4.2:31971605-31971624 MS.gene065894:CDS 55.0%
! AAAGAGTGCACGGACAGAGG+GGG - chr4.2:31971712-31971731 None:intergenic 55.0%
! CAAAGAGTGCACGGACAGAG+GGG - chr4.2:31971713-31971732 None:intergenic 55.0%
! GACAAAGAGTGCACGGACAG+AGG - chr4.2:31971715-31971734 None:intergenic 55.0%
! GACGGATTCGTCCCAGATAG+CGG - chr4.2:31971620-31971639 None:intergenic 55.0%
! GGGAAGGTGCACGGGTTATA+TGG + chr4.2:31975676-31975695 MS.gene065894:intron 55.0%
! TTTCGGAATTTGGGTGGCGG+CGG - chr4.2:31973211-31973230 None:intergenic 55.0%
!! CCAGGGGTATTTCGCTATGG+AGG - chr4.2:31975748-31975767 None:intergenic 55.0%
AAGTGGCGCAACATCTCCCC+CGG - chr4.2:31976792-31976811 None:intergenic 60.0%
ACCGGGACGGTTTGTGGCAA+GGG - chr4.2:31977186-31977205 None:intergenic 60.0%
ACGAGACAACGTGCCAGACC+AGG - chr4.2:31975766-31975785 None:intergenic 60.0%
ACTGGTCACCGGTACGAGAG+AGG - chr4.2:31977145-31977164 None:intergenic 60.0%
CGAGACAACGTGCCAGACCA+GGG - chr4.2:31975765-31975784 None:intergenic 60.0%
CGCTCGTCTTCTCCGGGTAA+GGG - chr4.2:31977257-31977276 None:intergenic 60.0%
CTGCGGCAACACCTCCAAAG+AGG + chr4.2:31976966-31976985 MS.gene065894:intron 60.0%
GAAGCTGCGGCTAACACCGA+GGG + chr4.2:31977413-31977432 MS.gene065894:CDS 60.0%
GACGGTTTGTGGCAAGGGCA+AGG - chr4.2:31977181-31977200 None:intergenic 60.0%
GAGACAACGTGCCAGACCAG+GGG - chr4.2:31975764-31975783 None:intergenic 60.0%
GAGATCACCGGGACGGTTTG+TGG - chr4.2:31977192-31977211 None:intergenic 60.0%
GGAGTTACTGCTCTGGCAGC+AGG + chr4.2:31975414-31975433 MS.gene065894:CDS 60.0%
GGGGAGATGTTGCGCCACTT+GGG + chr4.2:31976792-31976811 MS.gene065894:CDS 60.0%
GTTTCGGGATCGTCGGAAGG+AGG - chr4.2:31973184-31973203 None:intergenic 60.0%
TCGCTCGTCTTCTCCGGGTA+AGG - chr4.2:31977258-31977277 None:intergenic 60.0%
!! CTCTTTGGAGGTGTTGCCGC+AGG - chr4.2:31976968-31976987 None:intergenic 60.0%
!! GGAGGTGTCGTTGTCCGAGA+CGG - chr4.2:31971638-31971657 None:intergenic 60.0%
CACCGGGACGGTTTGTGGCA+AGG - chr4.2:31977187-31977206 None:intergenic 65.0%
CGGAGGGGTTTCGGGATCGT+CGG - chr4.2:31973191-31973210 None:intergenic 65.0%
GAAACCAGATGCGGCGGCGA+TGG - chr4.2:31973131-31973150 None:intergenic 65.0%
GCCCTTGCCACAAACCGTCC+CGG + chr4.2:31977182-31977201 MS.gene065894:CDS 65.0%
GGAAGCTGCGGCTAACACCG+AGG + chr4.2:31977412-31977431 MS.gene065894:CDS 65.0%
GGGGGAGATGTTGCGCCACT+TGG + chr4.2:31976791-31976810 MS.gene065894:CDS 65.0%
GGGGTTTCGGGATCGTCGGA+AGG - chr4.2:31973187-31973206 None:intergenic 65.0%
GTCGGAAGGAGGTGGAGCGT+CGG - chr4.2:31973173-31973192 None:intergenic 65.0%
GTGACAGCCTGCGACCCAAG+TGG - chr4.2:31976809-31976828 None:intergenic 65.0%
TCGGGATCGTCGGAAGGAGG+TGG - chr4.2:31973181-31973200 None:intergenic 65.0%
TGTTGCGCCACTTGGGTCGC+AGG + chr4.2:31976799-31976818 MS.gene065894:CDS 65.0%
! GAATTTGGGTGGCGGCGGAG+GGG - chr4.2:31973206-31973225 None:intergenic 65.0%
! GGAATTTGGGTGGCGGCGGA+GGG - chr4.2:31973207-31973226 None:intergenic 65.0%
!! GAGCGTCGGAGAAAGCGTGG+TGG - chr4.2:31973159-31973178 None:intergenic 65.0%
!! GTGGAGCGTCGGAGAAAGCG+TGG - chr4.2:31973162-31973181 None:intergenic 65.0%
!! TGGAGGTGTTGCCGCAGGCA+AGG - chr4.2:31976963-31976982 None:intergenic 65.0%
ACCAGATGCGGCGGCGATGG+CGG - chr4.2:31973128-31973147 None:intergenic 70.0%
! CGGAATTTGGGTGGCGGCGG+AGG - chr4.2:31973208-31973227 None:intergenic 70.0%
TCCGCCATCGCCGCCGCATC+TGG + chr4.2:31973124-31973143 MS.gene065894:CDS 75.0%
! GGGTGGCGGCGGAGGGGTTT+CGG - chr4.2:31973200-31973219 None:intergenic 75.0%
! GGTGGCGGCGGAGGGGTTTC+GGG - chr4.2:31973199-31973218 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr4.2 gene 31971603 31977604 31971603 ID=MS.gene065894
chr4.2 mRNA 31971603 31977604 31971603 ID=MS.gene065894.t1;Parent=MS.gene065894
chr4.2 exon 31971603 31971750 31971603 ID=MS.gene065894.t1.exon1;Parent=MS.gene065894.t1
chr4.2 CDS 31971603 31971750 31971603 ID=cds.MS.gene065894.t1;Parent=MS.gene065894.t1
chr4.2 exon 31973065 31973330 31973065 ID=MS.gene065894.t1.exon2;Parent=MS.gene065894.t1
chr4.2 CDS 31973065 31973330 31973065 ID=cds.MS.gene065894.t1;Parent=MS.gene065894.t1
chr4.2 exon 31973427 31973522 31973427 ID=MS.gene065894.t1.exon3;Parent=MS.gene065894.t1
chr4.2 CDS 31973427 31973522 31973427 ID=cds.MS.gene065894.t1;Parent=MS.gene065894.t1
chr4.2 exon 31974487 31974597 31974487 ID=MS.gene065894.t1.exon4;Parent=MS.gene065894.t1
chr4.2 CDS 31974487 31974597 31974487 ID=cds.MS.gene065894.t1;Parent=MS.gene065894.t1
chr4.2 exon 31974678 31974987 31974678 ID=MS.gene065894.t1.exon5;Parent=MS.gene065894.t1
chr4.2 CDS 31974678 31974987 31974678 ID=cds.MS.gene065894.t1;Parent=MS.gene065894.t1
chr4.2 exon 31975361 31975451 31975361 ID=MS.gene065894.t1.exon6;Parent=MS.gene065894.t1
chr4.2 CDS 31975361 31975451 31975361 ID=cds.MS.gene065894.t1;Parent=MS.gene065894.t1
chr4.2 exon 31975677 31976010 31975677 ID=MS.gene065894.t1.exon7;Parent=MS.gene065894.t1
chr4.2 CDS 31975677 31976010 31975677 ID=cds.MS.gene065894.t1;Parent=MS.gene065894.t1
chr4.2 exon 31976767 31976915 31976767 ID=MS.gene065894.t1.exon8;Parent=MS.gene065894.t1
chr4.2 CDS 31976767 31976915 31976767 ID=cds.MS.gene065894.t1;Parent=MS.gene065894.t1
chr4.2 exon 31977091 31977604 31977091 ID=MS.gene065894.t1.exon9;Parent=MS.gene065894.t1
chr4.2 CDS 31977091 31977604 31977091 ID=cds.MS.gene065894.t1;Parent=MS.gene065894.t1
Gene Sequence

>MS.gene065894

ATGTTGTGTAGGGTCCGCTATCTGGGACGAATCCGTCTCGGACAACGACACCTCCCCACTCTTATGTCCACAGTCGCGTCCCCTTCTAATATAGGGCGCACAACTACCCCCTCTGTCCGTGCACTCTTTGTCATCGTCTCATTGCCAAGTATCTGCCTGTTTGGGTTGCTAGACATATCAACACAACTTAAAACAATGCTAAAAATCAATTAATTTTTTATTGAGACATTTTATCAAACACCTAGAGTTCAACATAAACATTATGAGTACATTATGTCATTTCAATCTCTAAACTACCACATTAAACTCAAACATACTATAATCAACATTAACAATCCAATTTCTAAGTAATTTCATCATTAACATGCAAAAAATCAATTAATTTTTCATTGAAACATTTTATCAAACACCTAGAGTTCAACATAAACATTATGAATTCAGTGTGTCATTTCAATCTCTAAACTATCACATTGCACTCAAACTTACTTTAATCAATATTAACAATCCAATTTCTAACTAATTTCATTGTTAACATGCAAAAAATCTATTATTTTTTCATTGAGACATTTTATCAAACACACAAAGTTCAACATAAATATTATGAGTTTATCGTGTCATTTTAATCTCTAAACTATCATTTTGCACTCAAACTTGCTCTAATCAATGTTAACAATCCAATTTCTAACTAATTTCATCATTAACATGCAAAAAATCTAACAATTTCAACAACCCTAAAAAAGCTAACATTTCACAACTTCTTTAAAAAAAGAGTGGTGATATATGTACAACCATTTGTGACAACTTTCATTTTCTCTCTTCTCATTGGTCCAAAACAATAGAGAGAAAAAAATGAAGAGAGAGAATAAGAATATAATGTGAGTATGAGAGAGAAAGTTGTCAAAAAATTGTAATAAAGTTAATTGTACAAATATCATTTCTCATAAAAAAGTCAAACTAAACACGAAAGTAACATAACAAGTTAACTCTTTATCAACTAAAATGGATTGTAAATAAATTAATGAATAGTTTATTTTATTTAATTAACTAATGAATTTCTTGCTAATCATCTATTGCAATCTTAATTCATCACATCCATATACTTTGCCAATCATCAAGCATATGCTTTTTTGAGTTATGTTAACTTGTGCCTTTGGGGCATAAGTTAAGAAACTAAAAAGGAAATAATAAATAATTTTTGTATTGAAAATATAAATTATTAAACTTTTACAACAATAAATACACAAGTTCCAAGAAAATATTTCTATCTTTAACTTTTTAACTTTTGTCCTCATGACACAAGTTAACATTTCCCTATTTTTTTTTTATTTTTTTCTTTTCACCATGTACTCATCTGCAATTTTGTAAACTTACGTATTCTTGCTGGATACGAAATTATACCCAAAAATTATACACCCTACACAAACCCATCACTAAAACCCTCAACTCCGCTGTTAAACCTTAGCTCCCAACAAAAACAACCTCAACTCAACAATGGCAAAACCATACGCCGTAGGTTTCTTTTCCGCCATCGCCGCCGCATCTGGTTTCTCTCACCACCACGCTTTCTCCGACGCTCCACCTCCTTCCGACGATCCCGAAACCCCTCCGCCGCCACCCAAATTCCGAAACAACAATCCCAGAACTACCTCTGCTGGGTTTGATCCAGAACCTCTCGTCAAAGGAGCCAAAACCCTACACGATATCGCTACTTCACCTCATGGCAAAAATGTTGAATTTTTATTCCCTTCTCATTCTTCCATTCATACCCTTTTGCTTTTCTTTTTTATTTATTTTTAATTTGTCTTTTTTTTTTTTTTGTTGAAGGTTTTTGAGAATATTAAAAAGAGAGAGGATGAAAAACAAGCTGAATTCGCTGCAAAGGTTGTTGAGTCTAATCAAATCAGAGCTCAACATGAGGCTGTAAGTTTGTTTATCCTAGTAAAACCATATGTTATGTATTTTTTATTTTATTTTATGTTCTTAATTTTAGTATGTTTTTGGTTCTGCTTCGACAAAAATTGATTTAGTTTTAGTAAAATTGATTTTAGTTAAGAATAAGTGTATGTTTGGTTATGCTTAACAAAAAATTGTTTTTGAGTGAATTGATTATGGATAAAATTGAGTTGAATGTGAAGTGATTTATGTTACAATATATTCATGTAACAGTGAGTTGAACAATAAATTTGAGTGTAAACATCAGTTCTAGAATTAGAAGCTACAATTTCTTGCTTTAAGTAGAATCAATTCTTGAGGCAAATTCAATTATGTTGGAGGCTAGTAAAAAATGTCAGAATCAATTTTATATTTCTAGAATCAATTTTGGATCCTCTAGAAGTGAAACCAAACATACACTAAGTTGAATGTTTGGATGTGTTCAAGTAAAAGTGATTGAAAAGTAAGTTTGAGTGTAAAAATCACTTTTGGAGTCAAAAGTTACAAAATATAGCTTCAAGTTAGAATCAATTTTAGAGTCAAAATCAATTCCAATTGGCATCACCCAAACATGTGAAAATCAATAATGTATGTTCGGGATCACTTTTTGCTCTCCCTGTTGTGAAACCAAACACACAGTTGGAAACTGTTCCGTTTTCCTAATCGTGCACACTTTGCATGGGATTTTCAATTTTTAGTTATTGTAAGTTAAAGTCGTCTCAAAGTTTAATAAATCATATCATTACCTTCAAGTCATCTCATAGTTTAATAAATCATATCCATCGCCTTATAAGTTCTAGCTGCATGATGAAAATGAATTTGTTTAATTGCAATTTGCAAGCATCCTTCAAAGTTAAAAAATTGAATATTAATTAGCTTGAAAACTTTTACTTTCATTTGTGTGTGTATCTTGTGTTTTTCTTTCCAGCATTTCAACTGTTTTCTCTTGCAGGAGAGACAAAGGATTACATATGAGGAAAAAAAGAAGCTTGGACAGCTTCAGGATCAAATCAAATCCCAGTTGGCTAAGTATAAGGATGAGTTGACGAGGAAGAGGATGCAGGTATTGAATCTTTCGAAAGTTTAGTTTTTTAATTTTGGTCATTTTAATAGTCTTTCTCATTCTTGTATTATTATTGTAAGGCAGAAAATGAACAAAAGAGAGCAAGGAACCAAGAGCTAGTGAAAATGCAGGAAGATTCTTCAATCAAACTGCAGCAAGCTCGGCGTGCAATAGAAGAACAGATTCAGGCAAATCTAATGCAGACTGAGGCAGAGATCGCTGAGATTGATCGTAAGACAATCAAAGTAAAGGCTGAAGCAGAAGCAGAAGCAGACGCACTTGTATTAACGCAAACTGAGGATGTTAGAAGGCGAAAGATATATGATACCGCTAAGTTAGAAACAGAAAAATGGGTTGCTTCCATAAATGCTACTTTTGACCATATTGGAGGTACATTTTTACTAGTCAGTATGCACTGTGCAAATGGTTACATTGACAATCTTAAAAGACAACGGTCATCTCTATATTTATGCATTTGCTGATTTGAATACATGACCGAATCATTAATAGTGTGTATACTTTGCTTTTAAAAAGAAATTTCATGTGGATTTTTGTAGCAATATGTAATTTTATCTATTTTACTTTCCTGATGTTGTTTACTCATTAATTAGTAATGTAGTACTTTGGGGTTGTATTTACTTTTACATGATGTATTTTATATTAACTTGTTTGATTAGCTCCATTAGTGTTTTTACTCGACTAGGTTAGTTAGAAAAACTCCACACAAATCCCTATGTTTGAAAATTCAGTCTATCTTTTGCAGGGGGTTTAAAAGCCATTCTAACAGATCAAGACAAGTTAGTTGTAGCAGTTGGTGGAGTTACTGCTCTGGCAGCAGGAATCTACACGACAAGGTATAAATTGTTCACAAAGTTTCTAATGAGCTACTGAAAATGAGGAAGGTGGGCAAAAACATAATCAGATATTATTTTTGCCAAGCCTTGTTCTTTTTTACCGATATTCAACTTCAAATGCTCATCTTCTCTATCTGTCTATTTCGTACAAATAGAAAAATTGTACTTTGTTGTCGTTTGAATTGTATGCGTAGTTTGTATTCACATTGGACTTGATGTTTGTAGGGAAGGTGCACGGGTTATATGGGGATATGTTGATAGAATATTGGGACAACCATCATTGATCCGGGAGTCCTCCATAGCGAAATACCCCTGGTCTGGCACGTTGTCTCGTATCATGAGCTCCCTGTCCCGACGTACTGATCTAGAATCTGCTTCAAAAGTCAGAAATGATTTTGGTGATGTAATTTTGCATCCTGATCTTAATAACAGAATTGGGCAGCTGGCATCTGCAACTAAGCATACAAAAGAACATCATGCACCATTCAGAAACATGCTTTTTTATGGCCCTCCAGGAACAGGAAAGACAATGGCTGCCAGAGAGTTGGCTCGTAGATCTGTATGATTTTGTACTTTTTCTATCGATCTTATTCCAGTTTTCTAGTGTTTCATACTATCTACCTTGGTTTTTTCTATGTTCCAGAGAAGTTTAAAATACTATCTACCTTGATTTTTCCTATGTTCTAGAGAAGTTTAAAATACTATCTACCTTGGTTTTTCCTATGTTCTAGTGAAGTTTAAATTTTATGCTGTAATGGATTTTATTTTATCATATGTCATGATTATATTAGCAAAACTATCTTCTCATTTCAAGTATTTTTCCATTTTCCTTTTCATAAGTTTTCAACTGATGAATCTAAAATAATCTGTTTTCAAGGCTCTCTAAATTTATTTTACCCTAGTGTGTTTGTAAACTCAATTTTAAGTTCTTGATTCTTTGGAATGTAGTTCTCAATACAAGTTGAATTACTTTTTTATTTAGGGGAATAGAAGTCGATGTTAAGTATCATGCTCTGGGTTATTGCATATTTTAAGAAACGTTAAAGTATATCCCTTACAGTTGTTTTTTTGTGCTCATAATTTTTTAAACAGTATTTTTTCCTTTAGATATACTACCTCTGCCCCTTATTATAAGTACCATCTTTACAATTTCATACATATGAAGAAAGTTATATAGTGTATTCCAAACTTCTCCTTTAATTATTTGGAAAGAAGCTTATATTTATGGACTTTTTTTTCTTTTCAAATAAGACTTCTATTTAGAGACAAAAGTGGTATCGTTATTTTGTCTCATTTTTGTTTGGATACACTGCAGGGATTAGATTATGCATTGATGACCGGGGGAGATGTTGCGCCACTTGGGTCGCAGGCTGTCACGAAGATACACCAATTGTTTGATTGGGCCAAGAAGTCAAAAAGGGGTTTATTGCTTTTCATTGACGAAGCTGATGCATTTCTGTGCGAGTAAGCAACACTTCTTTCATGTTTTTATCATTTACTCTCTTTCTCCTTGCCTGCGGCAACACCTCCAAAGAGGAAAAAAAGGTTGCACAATATTAATATGCAGCACGATATGAAAACAACATTTCTTGCACCAAAGTTGACCAAGCGAATTGATTGCATTGGGTAAATTTTACAGGCGGAACAAGACTTACATGAGTGAAGCACAAAGAAGTGCACTAAATGCGCTCCTCTCTCGTACCGGTGACCAGTCCAAAGACATAGTCCTTGCCCTTGCCACAAACCGTCCCGGTGATCTCGATTCAGCCGTGTCAGACCGTATTGATGAGGTCCTAGAATTTCCCTTACCCGGAGAAGACGAGCGATATAAACTTCTTAAGCTCTATCTGGACAAGTACATTGCCCAAGCTGGATCAAGAAAACCTGGTTTAGTCCAAAGACTATTGAAAGGAAACCCACAAAAGATAGAGATAAAAGGAATGACTGATGATATCATAAAGGAAGCTGCGGCTAACACCGAGGGATTTTCTGGAAGGGAAATAGCAAAACTGATGGCAAGTGTCCAAGCTGCTGTGTATGGAAGCAAGGACTGTGTTCTTGACCAAAGCTTGTTCCGCGAAGTGATTGATTATAAAGTTGCTGAGCATCAACAGAGAAGAAAATTGGCAGGTGCTGATAAAGCTAGTGCATGA
Protein sequence

>MS.gene065894.t1

MLCRVRYLGRIRLGQRHLPTLMSTVASPSNIGRTTTPSVRALFVIVSLPTPNKNNLNSTMAKPYAVGFFSAIAAASGFSHHHAFSDAPPPSDDPETPPPPPKFRNNNPRTTSAGFDPEPLVKGAKTLHDIATSPHGKNVFENIKKREDEKQAEFAAKVVESNQIRAQHEAERQRITYEEKKKLGQLQDQIKSQLAKYKDELTRKRMQAENEQKRARNQELVKMQEDSSIKLQQARRAIEEQIQANLMQTEAEIAEIDRKTIKVKAEAEAEADALVLTQTEDVRRRKIYDTAKLETEKWVASINATFDHIGGGLKAILTDQDKLVVAVGGVTALAAGIYTTREGARVIWGYVDRILGQPSLIRESSIAKYPWSGTLSRIMSSLSRRTDLESASKVRNDFGDVILHPDLNNRIGQLASATKHTKEHHAPFRNMLFYGPPGTGKTMAARELARRSGLDYALMTGGDVAPLGSQAVTKIHQLFDWAKKSKRGLLLFIDEADAFLCERNKTYMSEAQRSALNALLSRTGDQSKDIVLALATNRPGDLDSAVSDRIDEVLEFPLPGEDERYKLLKLYLDKYIAQAGSRKPGLVQRLLKGNPQKIEIKGMTDDIIKEAAANTEGFSGREIAKLMASVQAAVYGSKDCVLDQSLFREVIDYKVAEHQQRRKLAGADKASA