AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene066024

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene066024.t1 MTR_1g075600 83.217 143 24 0 1 143 1 143 8.01e-85 248
MS.gene066024.t1 MTR_1g077360 81.818 143 26 0 1 143 1 143 2.31e-84 247
MS.gene066024.t1 MTR_1g105920 76.923 143 33 0 1 143 1 143 1.09e-80 238
MS.gene066024.t1 MTR_8g043650 75.524 143 35 0 1 143 1 143 7.14e-80 236
MS.gene066024.t1 MTR_2g030740 74.825 143 36 0 1 143 1 143 7.22e-80 236
MS.gene066024.t1 MTR_1g105910 72.667 150 41 0 1 150 1 150 1.95e-79 235
MS.gene066024.t1 MTR_1g012570 75.524 143 35 0 1 143 1 143 1.39e-77 230
MS.gene066024.t1 MTR_5g045560 73.427 143 38 0 1 143 1 143 4.70e-76 226
MS.gene066024.t1 MTR_3g030770 72.727 143 39 0 1 143 1 143 2.02e-75 224
MS.gene066024.t1 MTR_3g052920 73.427 143 38 0 1 143 1 143 2.30e-75 224
MS.gene066024.t1 MTR_2g085280 72.028 143 40 0 1 143 1 143 9.28e-75 223
MS.gene066024.t1 MTR_2g085250 72.028 143 40 0 1 143 1 143 1.06e-74 223
MS.gene066024.t1 MTR_1g106070 72.028 143 40 0 1 143 1 143 1.51e-74 220
MS.gene066024.t1 MTR_1g108510 72.028 143 40 0 1 143 1 143 3.59e-74 221
MS.gene066024.t1 MTR_5g055100 73.571 140 37 0 1 140 1 140 8.56e-73 218
MS.gene066024.t1 MTR_5g053390 70.629 143 42 0 1 143 1 143 5.31e-72 216
MS.gene066024.t1 MTR_3g052870 79.365 126 26 0 1 126 1 126 1.19e-71 214
MS.gene066024.t1 MTR_2g093190 69.231 143 44 0 1 143 1 143 5.63e-70 211
MS.gene066024.t1 MTR_0121s0080 69.930 143 43 0 1 143 1 143 9.73e-70 210
MS.gene066024.t1 MTR_1g108580 66.434 143 48 0 1 143 1 143 1.09e-68 207
MS.gene066024.t1 MTR_1g105905 70.635 126 37 0 18 143 1 126 2.72e-62 191
MS.gene066024.t1 MTR_0121s0100 71.318 129 37 0 1 129 1 129 3.09e-62 187
MS.gene066024.t1 MTR_1g075570 75.397 126 17 1 18 143 1 112 1.16e-61 187
MS.gene066024.t1 MTR_3g030780 67.969 128 41 0 1 128 1 128 1.21e-59 181
MS.gene066024.t1 MTR_3g080940 54.815 135 61 0 9 143 9 143 1.46e-52 166
MS.gene066024.t1 MTR_7g062350 65.000 120 42 0 24 143 36 155 1.08e-51 165
MS.gene066024.t1 MTR_3g067910 70.588 102 30 0 21 122 2 103 2.90e-49 154
MS.gene066024.t1 MTR_1g108500 57.732 97 20 1 22 118 110 185 1.95e-29 109
MS.gene066024.t1 MTR_8g086290 40.845 142 74 2 5 143 8 142 9.41e-29 104
MS.gene066024.t1 MTR_3g067875 80.357 56 11 0 18 73 1 56 1.50e-28 100
MS.gene066024.t1 MTR_3g067915 66.667 66 22 0 61 126 31 96 8.57e-28 99.4
MS.gene066024.t1 MTR_2g105290 38.732 142 77 2 5 143 8 142 1.03e-27 101
MS.gene066024.t1 MTR_7g028448 42.446 139 68 4 5 143 8 134 2.23e-25 95.5
MS.gene066024.t1 MTR_4g036915 42.446 139 68 4 5 143 8 134 2.23e-25 95.5
MS.gene066024.t1 MTR_1g063160 46.226 106 55 2 9 112 2 107 7.06e-25 94.4
MS.gene066024.t1 MTR_3g067870 68.254 63 20 0 16 78 83 145 1.67e-24 92.8
MS.gene066024.t1 MTR_1g047550 54.930 71 32 0 9 79 2 72 5.32e-24 92.0
MS.gene066024.t1 MTR_8g079502 54.930 71 32 0 9 79 2 72 1.86e-23 90.9
MS.gene066024.t1 MTR_1g054265 51.948 77 37 0 9 85 2 78 2.38e-23 90.1
MS.gene066024.t1 MTR_4g131030 39.706 136 58 5 9 125 2 132 2.70e-23 91.3
MS.gene066024.t1 MTR_8g051580 41.228 114 62 1 9 122 2 110 4.93e-23 89.7
MS.gene066024.t1 MTR_4g127140 38.194 144 78 3 5 144 8 144 2.14e-22 88.2
MS.gene066024.t1 MTR_8g046350 53.521 71 33 0 9 79 2 72 1.84e-21 85.1
MS.gene066024.t1 MTR_4g094638 49.275 69 35 0 9 77 2 70 4.29e-18 76.6
MS.gene066024.t1 MTR_4g094632 35.849 106 66 1 9 114 2 105 5.55e-18 75.9
MS.gene066024.t1 MTR_4g102530 38.182 110 66 1 10 119 3 110 1.79e-17 75.9
MS.gene066024.t1 MTR_3g005530 50.000 68 34 0 9 76 2 69 1.48e-16 73.6
MS.gene066024.t1 MTR_1g101970 50.000 68 34 0 9 76 2 69 2.00e-16 72.8
MS.gene066024.t1 MTR_4g093970 53.030 66 31 0 10 75 29 94 3.40e-16 73.2
MS.gene066024.t1 MTR_8g033220 46.154 78 42 0 10 87 3 80 4.68e-16 72.4
MS.gene066024.t1 MTR_8g033220 46.154 78 42 0 10 87 3 80 5.18e-16 72.4
MS.gene066024.t1 MTR_3g452380 45.946 74 40 0 3 76 11 84 8.43e-16 72.0
MS.gene066024.t1 MTR_1g053070 44.444 81 45 0 9 89 2 82 2.21e-15 70.9
MS.gene066024.t1 MTR_5g066180 46.479 71 38 0 9 79 2 72 2.29e-15 70.5
MS.gene066024.t1 MTR_6g464720 47.826 69 35 1 9 76 2 70 2.45e-15 70.9
MS.gene066024.t1 MTR_8g033270 47.059 68 36 0 9 76 2 69 3.08e-15 70.5
MS.gene066024.t1 MTR_4g109830 30.818 159 75 4 9 132 2 160 3.87e-15 70.1
MS.gene066024.t1 MTR_7g075870 47.761 67 35 0 10 76 3 69 9.43e-15 68.6
MS.gene066024.t1 MTR_3g102570 41.905 105 58 3 9 112 2 104 9.70e-15 70.1
MS.gene066024.t1 MTR_8g087860 48.529 68 35 0 9 76 18 85 9.71e-15 69.3
MS.gene066024.t1 MTR_5g021270 48.571 70 34 1 9 76 2 71 1.26e-14 68.6
MS.gene066024.t1 MTR_5g021270 48.571 70 34 1 9 76 2 71 1.32e-14 68.6
MS.gene066024.t1 MTR_3g109930 51.786 56 27 0 27 82 20 75 1.52e-14 67.4
MS.gene066024.t1 MTR_8g066260 31.410 156 72 5 9 129 2 157 1.61e-14 68.6
MS.gene066024.t1 MTR_0003s0590 32.192 146 68 2 9 123 2 147 1.92e-14 68.6
MS.gene066024.t1 MTR_2g009890 42.105 76 44 0 9 84 2 77 2.10e-14 68.6
MS.gene066024.t1 MTR_2g017865 48.529 68 35 0 9 76 17 84 2.67e-14 68.2
MS.gene066024.t1 MTR_2g461710 53.571 56 26 0 9 64 2 57 2.70e-14 63.9
MS.gene066024.t1 MTR_5g032520 47.143 70 36 1 9 77 2 71 5.59e-14 67.0
MS.gene066024.t1 MTR_5g032150 47.143 70 36 1 9 77 2 71 5.78e-14 67.0
MS.gene066024.t1 MTR_4g084740 35.043 117 70 2 9 124 2 113 7.95e-14 67.4
MS.gene066024.t1 MTR_8g022970 31.333 150 88 5 2 143 9 151 1.09e-13 65.5
MS.gene066024.t1 MTR_7g016630 41.667 72 41 1 9 79 2 73 1.17e-13 66.2
MS.gene066024.t1 MTR_7g075870 47.059 68 35 1 10 76 3 70 1.27e-13 65.9
MS.gene066024.t1 MTR_7g016600 44.928 69 37 1 9 76 2 70 1.63e-13 65.9
MS.gene066024.t1 MTR_5g046790 49.123 57 29 0 9 65 2 58 1.76e-13 65.1
MS.gene066024.t1 MTR_6g015975 44.928 69 37 1 9 76 2 70 1.81e-13 65.9
MS.gene066024.t1 MTR_1g038300 47.143 70 35 1 9 76 2 71 2.22e-13 65.5
MS.gene066024.t1 MTR_1g029670 43.939 66 36 1 9 74 2 66 2.35e-13 64.3
MS.gene066024.t1 MTR_5g031000 41.176 68 40 0 9 76 2 69 3.67e-13 64.7
MS.gene066024.t1 MTR_5g031000 41.176 68 40 0 9 76 2 69 3.70e-13 64.7
MS.gene066024.t1 MTR_3g088615 43.939 66 36 1 9 74 2 66 7.17e-13 63.2
MS.gene066024.t1 MTR_5g046870 50.000 56 28 0 9 64 2 57 7.89e-13 61.6
MS.gene066024.t1 MTR_5g066960 45.614 57 31 0 9 65 2 58 7.97e-13 60.1
MS.gene066024.t1 MTR_3g113030 44.286 70 37 1 9 76 2 71 8.56e-13 63.5
MS.gene066024.t1 MTR_3g084980 51.786 56 27 0 9 64 2 57 1.24e-12 63.5
MS.gene066024.t1 MTR_7g075850 60.417 48 19 0 9 56 2 49 1.63e-12 63.2
MS.gene066024.t1 MTR_8g097090 50.000 56 28 0 9 64 2 57 2.47e-12 62.8
MS.gene066024.t1 MTR_4g109810 48.214 56 29 0 9 64 2 57 2.52e-12 62.8
MS.gene066024.t1 MTR_4g093030 43.478 69 37 1 9 75 2 70 6.32e-12 60.1
MS.gene066024.t1 MTR_3g437790 33.607 122 74 3 26 143 30 148 9.05e-12 60.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene066024.t1 AT5G60440 54.930 142 61 2 5 143 3 144 3.25e-50 162
MS.gene066024.t1 AT1G01530 47.761 134 67 2 4 136 2 133 6.65e-37 127
MS.gene066024.t1 AT2G24840 46.429 140 66 3 9 143 63 198 3.77e-36 125
MS.gene066024.t1 AT1G65360 46.043 139 71 3 5 141 3 139 3.05e-34 119
MS.gene066024.t1 AT4G36590 47.445 137 67 1 5 136 3 139 6.72e-33 117
MS.gene066024.t1 AT2G34440 41.441 111 64 1 9 119 2 111 5.29e-25 94.4
MS.gene066024.t1 AT3G04100 30.822 146 97 2 2 143 7 152 9.06e-23 89.7
MS.gene066024.t1 AT3G66656 38.655 119 69 1 9 123 2 120 1.50e-21 85.9
MS.gene066024.t1 AT1G72350 57.534 73 29 1 9 81 43 113 1.53e-21 87.0
MS.gene066024.t1 AT2G45660 50.000 68 34 0 10 77 3 70 2.05e-17 74.7
MS.gene066024.t1 AT2G45660 50.000 68 34 0 10 77 3 70 5.21e-17 74.7
MS.gene066024.t1 AT4G22950 42.105 76 44 0 10 85 3 78 8.54e-17 73.2
MS.gene066024.t1 AT5G51870 50.000 72 36 0 5 76 21 92 1.26e-16 73.2
MS.gene066024.t1 AT2G45650 48.529 68 35 0 9 76 2 69 1.32e-16 74.3
MS.gene066024.t1 AT5G51870 37.288 118 57 3 10 119 3 111 1.53e-16 73.6
MS.gene066024.t1 AT3G54340 40.458 131 62 6 9 125 2 130 1.74e-16 73.6
MS.gene066024.t1 AT4G09960 43.023 86 48 1 9 93 2 87 2.26e-16 73.2
MS.gene066024.t1 AT5G51870 52.239 67 32 0 10 76 3 69 2.42e-16 72.0
MS.gene066024.t1 AT4G09960 43.023 86 48 1 9 93 3 88 2.63e-16 73.2
MS.gene066024.t1 AT4G09960 43.023 86 48 1 9 93 2 87 2.65e-16 73.2
MS.gene066024.t1 AT5G51870 52.239 67 32 0 10 76 3 69 2.69e-16 72.8
MS.gene066024.t1 AT4G09960 43.023 86 48 1 9 93 12 97 3.65e-16 72.8
MS.gene066024.t1 AT5G51870 52.239 67 32 0 10 76 13 79 3.68e-16 72.8
MS.gene066024.t1 AT4G09960 43.023 86 48 1 9 93 28 113 4.52e-16 72.8
MS.gene066024.t1 AT4G22950 43.662 71 40 0 10 80 3 73 5.71e-16 72.0
MS.gene066024.t1 AT4G22950 43.662 71 40 0 10 80 3 73 5.71e-16 72.0
MS.gene066024.t1 AT4G09960 43.023 86 48 1 9 93 97 182 6.69e-16 73.2
MS.gene066024.t1 AT1G28460 28.986 138 95 1 5 139 4 141 1.19e-15 70.5
MS.gene066024.t1 AT3G57230 44.118 68 38 0 9 76 2 69 1.47e-15 69.3
MS.gene066024.t1 AT5G62165 47.761 67 35 0 10 76 3 69 1.81e-15 69.3
MS.gene066024.t1 AT5G62165 47.761 67 35 0 10 76 3 69 1.81e-15 69.3
MS.gene066024.t1 AT5G62165 47.761 67 35 0 10 76 3 69 1.81e-15 69.3
MS.gene066024.t1 AT5G62165 47.761 67 35 0 10 76 3 69 2.15e-15 68.2
MS.gene066024.t1 AT1G17310 51.899 79 36 1 8 86 47 123 2.31e-15 70.5
MS.gene066024.t1 AT1G17310 51.899 79 36 1 8 86 58 134 3.11e-15 70.5
MS.gene066024.t1 AT5G62165 47.761 67 35 0 10 76 3 69 3.73e-15 68.6
MS.gene066024.t1 AT5G62165 47.761 67 35 0 10 76 3 69 3.73e-15 68.6
MS.gene066024.t1 AT5G62165 47.761 67 35 0 10 76 3 69 3.73e-15 68.6
MS.gene066024.t1 AT5G62165 47.761 67 35 0 10 76 3 69 3.73e-15 68.6
MS.gene066024.t1 AT5G62165 47.761 67 35 0 10 76 3 69 3.73e-15 68.6
MS.gene066024.t1 AT1G29962 27.660 141 96 3 5 139 4 144 4.40e-15 68.9
MS.gene066024.t1 AT4G24540 48.529 68 35 0 9 76 2 69 5.61e-15 69.3
MS.gene066024.t1 AT5G62165 47.761 67 35 0 10 76 3 69 6.12e-15 69.3
MS.gene066024.t1 AT5G62165 47.761 67 35 0 10 76 3 69 6.12e-15 69.3
MS.gene066024.t1 AT5G62165 47.761 67 35 0 10 76 3 69 6.12e-15 69.3
MS.gene066024.t1 AT5G62165 47.761 67 35 0 10 76 3 69 7.02e-15 68.9
MS.gene066024.t1 AT5G62165 47.761 67 35 0 10 76 3 69 7.02e-15 68.9
MS.gene066024.t1 AT3G57230 44.118 68 38 0 9 76 2 69 7.10e-15 69.7
MS.gene066024.t1 AT3G57230 44.118 68 38 0 9 76 2 69 7.10e-15 69.7
MS.gene066024.t1 AT5G51860 47.761 67 35 0 10 76 3 69 7.13e-15 68.9
MS.gene066024.t1 AT4G18960 36.937 111 60 1 2 112 11 111 7.81e-15 69.7
MS.gene066024.t1 AT5G10140 46.377 69 36 1 9 76 2 70 8.70e-15 67.8
MS.gene066024.t1 AT4G37940 44.118 68 38 0 9 76 2 69 9.43e-15 68.9
MS.gene066024.t1 AT4G37940 44.118 68 38 0 9 76 2 69 9.47e-15 68.9
MS.gene066024.t1 AT3G61120 47.059 68 36 0 9 76 2 69 1.01e-14 69.3
MS.gene066024.t1 AT5G51860 47.761 67 35 0 10 76 3 69 1.01e-14 68.6
MS.gene066024.t1 AT4G37940 44.118 68 38 0 9 76 2 69 1.12e-14 67.8
MS.gene066024.t1 AT2G22540 45.588 68 37 0 9 76 2 69 1.28e-14 68.9
MS.gene066024.t1 AT2G22540 45.588 68 37 0 9 76 2 69 1.28e-14 68.9
MS.gene066024.t1 AT5G10140 46.377 69 36 1 9 76 2 70 1.32e-14 67.8
MS.gene066024.t1 AT5G10140 46.377 69 36 1 9 76 2 70 1.34e-14 67.8
MS.gene066024.t1 AT5G13790 47.059 68 36 0 9 76 2 69 1.55e-14 68.9
MS.gene066024.t1 AT5G13790 47.059 68 36 0 9 76 2 69 1.55e-14 68.9
MS.gene066024.t1 AT5G10140 46.377 69 36 1 9 76 2 70 1.67e-14 67.8
MS.gene066024.t1 AT3G57390 47.059 68 36 0 9 76 2 69 1.86e-14 68.2
MS.gene066024.t1 AT3G30260 44.928 69 37 1 9 76 2 70 2.17e-14 68.2
MS.gene066024.t1 AT2G42830 42.105 76 44 0 1 76 9 84 2.47e-14 68.2
MS.gene066024.t1 AT2G42830 42.105 76 44 0 1 76 9 84 2.58e-14 68.2
MS.gene066024.t1 AT5G60910 46.377 69 36 1 9 76 2 70 2.58e-14 68.2
MS.gene066024.t1 AT5G23260 48.000 75 37 1 5 77 14 88 2.80e-14 68.2
MS.gene066024.t1 AT5G23260 48.000 75 37 1 5 77 14 88 2.86e-14 68.2
MS.gene066024.t1 AT3G57390 47.059 68 36 0 9 76 2 69 2.94e-14 68.2
MS.gene066024.t1 AT3G58780 45.070 71 39 0 6 76 14 84 3.77e-14 67.8
MS.gene066024.t1 AT3G58780 45.070 71 39 0 6 76 20 90 4.20e-14 67.8
MS.gene066024.t1 AT5G20240 44.286 70 37 1 9 76 2 71 5.57e-14 65.5
MS.gene066024.t1 AT2G22630 44.118 68 38 0 9 76 2 69 6.16e-14 66.6
MS.gene066024.t1 AT2G22630 44.118 68 38 0 9 76 2 69 6.16e-14 66.6
MS.gene066024.t1 AT3G58780 45.070 71 39 0 6 76 14 84 6.26e-14 67.4
MS.gene066024.t1 AT4G11880 53.571 56 26 0 10 65 3 58 6.39e-14 65.9
MS.gene066024.t1 AT4G11880 53.571 56 26 0 10 65 3 58 6.39e-14 65.9
MS.gene066024.t1 AT1G69120 43.478 69 38 1 9 76 2 70 6.95e-14 66.6
MS.gene066024.t1 AT5G20240 44.286 70 37 1 9 76 2 71 7.52e-14 66.2
MS.gene066024.t1 AT4G11880 53.571 56 26 0 10 65 3 58 1.04e-13 66.2
MS.gene066024.t1 AT4G11880 53.571 56 26 0 10 65 3 58 1.04e-13 66.2
MS.gene066024.t1 AT1G77980 45.714 70 37 1 9 77 2 71 1.08e-13 67.0
MS.gene066024.t1 AT5G23260 49.296 71 34 1 9 77 2 72 1.25e-13 66.2
MS.gene066024.t1 AT5G23260 49.296 71 34 1 9 77 2 72 1.41e-13 65.9
MS.gene066024.t1 AT1G69120 43.478 69 38 1 9 76 2 70 1.56e-13 66.2
MS.gene066024.t1 AT1G26310 42.029 69 39 1 9 76 2 70 1.63e-13 65.9
MS.gene066024.t1 AT5G65050 44.928 69 37 1 9 76 2 70 1.72e-13 64.7
MS.gene066024.t1 AT1G22130 45.714 70 37 1 9 77 2 71 1.88e-13 66.6
MS.gene066024.t1 AT1G47760 34.483 116 61 3 9 123 2 103 1.91e-13 64.7
MS.gene066024.t1 AT1G77950 41.429 70 40 1 9 77 2 71 2.50e-13 65.5
MS.gene066024.t1 AT1G77950 41.429 70 40 1 9 77 2 71 2.50e-13 65.5
MS.gene066024.t1 AT1G77950 41.429 70 40 1 9 77 2 71 2.50e-13 65.5
MS.gene066024.t1 AT1G77950 41.429 70 40 1 9 77 2 71 2.50e-13 65.5
MS.gene066024.t1 AT2G14210 44.928 69 37 1 9 76 2 70 2.51e-13 65.1
MS.gene066024.t1 AT2G03710 51.786 56 27 0 9 64 2 57 2.77e-13 64.3
MS.gene066024.t1 AT2G14210 44.928 69 37 1 9 76 2 70 2.93e-13 65.1
MS.gene066024.t1 AT2G22540 53.571 56 26 0 9 64 2 57 3.53e-13 64.7
MS.gene066024.t1 AT5G65050 44.928 69 37 1 9 76 2 70 4.96e-13 63.9
MS.gene066024.t1 AT5G65050 44.928 69 37 1 9 76 2 70 5.29e-13 63.5
MS.gene066024.t1 AT5G65050 44.928 69 37 1 9 76 2 70 5.53e-13 63.5
MS.gene066024.t1 AT1G28450 27.660 141 96 3 5 139 4 144 8.72e-13 63.2
MS.gene066024.t1 AT5G15800 44.928 69 37 1 9 76 2 70 8.90e-13 63.9
MS.gene066024.t1 AT3G58780 48.333 60 31 0 6 65 14 73 8.98e-13 63.9
MS.gene066024.t1 AT2G03710 51.786 56 27 0 9 64 2 57 9.70e-13 63.9
MS.gene066024.t1 AT2G03710 51.786 56 27 0 9 64 2 57 9.81e-13 63.9
MS.gene066024.t1 AT3G58780 48.333 60 31 0 6 65 14 73 1.12e-12 63.9
MS.gene066024.t1 AT5G15800 44.928 69 37 1 9 76 2 70 1.31e-12 63.5
MS.gene066024.t1 AT5G65060 43.478 69 38 1 9 76 2 70 1.45e-12 62.4
MS.gene066024.t1 AT5G65060 43.478 69 38 1 9 76 2 70 1.78e-12 62.4
MS.gene066024.t1 AT5G65060 43.478 69 38 1 9 76 2 70 1.85e-12 62.0
MS.gene066024.t1 AT3G02310 50.000 56 28 0 9 64 2 57 2.07e-12 62.4
MS.gene066024.t1 AT1G24260 50.000 56 28 0 9 64 2 57 2.09e-12 63.2
MS.gene066024.t1 AT1G71692 42.857 70 39 1 9 77 2 71 2.15e-12 62.4
MS.gene066024.t1 AT1G24260 50.000 56 28 0 9 64 2 57 2.17e-12 62.8
MS.gene066024.t1 AT1G24260 50.000 56 28 0 9 64 2 57 2.22e-12 62.8
MS.gene066024.t1 AT5G65070 45.614 57 31 0 9 65 2 58 2.24e-12 61.2
MS.gene066024.t1 AT5G65070 45.614 57 31 0 9 65 2 58 3.36e-12 61.6
MS.gene066024.t1 AT3G02310 50.000 56 28 0 9 64 2 57 4.83e-12 62.0
MS.gene066024.t1 AT5G65070 45.614 57 31 0 9 65 2 58 7.36e-12 61.2
MS.gene066024.t1 AT5G65070 45.614 57 31 0 9 65 2 58 8.85e-12 60.8
MS.gene066024.t1 AT5G65070 45.614 57 31 0 9 65 2 58 1.02e-11 60.8
MS.gene066024.t1 AT1G48150 42.857 84 43 3 5 83 12 95 1.27e-11 61.2
MS.gene066024.t1 AT1G46408 30.000 130 74 4 10 126 5 130 1.39e-11 60.8
MS.gene066024.t1 AT5G49420 35.106 94 54 2 5 91 3 96 4.32e-11 59.7
MS.gene066024.t1 AT5G27130 41.176 85 46 2 2 82 6 90 4.53e-11 59.7
MS.gene066024.t1 AT2G26320 40.541 74 42 1 5 76 14 87 4.65e-11 56.6

Find 23 sgRNAs with CRISPR-Local

Find 29 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACTCATTCTCACGCTTCTTC+TGG 0.224311 1.2:-58238744 None:intergenic
TCTATGATTGTATCAACATT+TGG 0.326943 1.2:-58238598 None:intergenic
GACCCTTTCATCCATTCAAT+TGG 0.368840 1.2:-58238814 None:intergenic
GGCGAGCTTTGCACCCTTTG+TGG 0.375043 1.2:+58238517 MS.gene066024:CDS
CTATGATTGTATCAACATTT+GGG 0.399030 1.2:-58238597 None:intergenic
AGAAGAATGAGGCTCAGTTT+TGG 0.434752 1.2:+58238782 MS.gene066024:CDS
GGTGGGCTTGTCCAATTGAA+TGG 0.452982 1.2:+58238803 MS.gene066024:CDS
GACTCAAATTAATGATGCAC+TGG 0.478157 1.2:+58238717 MS.gene066024:CDS
GTCCAATTGAATGGATGAAA+GGG 0.502555 1.2:+58238812 MS.gene066024:CDS
AGCAATATATGCACCACAAA+GGG 0.513172 1.2:-58238530 None:intergenic
GCTCGCCAGCTTTCTTGAAG+AGG 0.524593 1.2:-58238501 None:intergenic
GCTCTCATTGTATTCTCACC+TGG 0.528422 1.2:+58238550 MS.gene066024:CDS
TGTCCAATTGAATGGATGAA+AGG 0.540994 1.2:+58238811 MS.gene066024:CDS
AGTGGCCTCTTCAAGAAAGC+TGG 0.550735 1.2:+58238496 MS.gene066024:CDS
AATGAAAACACGTTCTCACC+AGG 0.587082 1.2:-58238568 None:intergenic
GCTCGCACAATTTAGCGCTA+CGG 0.599772 1.2:-58238681 None:intergenic
CGATTTGCGTAAGAAGAATG+AGG 0.600173 1.2:+58238771 MS.gene066024:CDS
ACTTTCTCGAAGCGTCGTAG+TGG 0.635248 1.2:+58238478 MS.gene066024:CDS
GAGCAATATATGCACCACAA+AGG 0.643897 1.2:-58238531 None:intergenic
GTAAGCCTCAACGAATTGCA+TGG 0.651547 1.2:-58238659 None:intergenic
CAAGTACCACCTCAAAACAA+TGG 0.661198 1.2:+58238634 MS.gene066024:CDS
TGGCACCATGCAATTCGTTG+AGG 0.663336 1.2:+58238654 MS.gene066024:CDS
AGTGCTTTAATCATGTCTAG+CGG 0.668258 1.2:+58238388 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTCATGTCAATTTTT+TGG - chr1.2:58238432-58238451 None:intergenic 15.0%
! CTATGATTGTATCAACATTT+GGG - chr1.2:58238600-58238619 None:intergenic 25.0%
! TCTATGATTGTATCAACATT+TGG - chr1.2:58238601-58238620 None:intergenic 25.0%
AGCAATATATGCACCACAAA+GGG - chr1.2:58238533-58238552 None:intergenic 35.0%
GACTCAAATTAATGATGCAC+TGG + chr1.2:58238717-58238736 MS.gene066024:CDS 35.0%
GTCCAATTGAATGGATGAAA+GGG + chr1.2:58238812-58238831 MS.gene066024:CDS 35.0%
TCTAGCGGAAAGAAAAATCA+AGG + chr1.2:58238403-58238422 MS.gene066024:CDS 35.0%
TGTCCAATTGAATGGATGAA+AGG + chr1.2:58238811-58238830 MS.gene066024:CDS 35.0%
AATGAAAACACGTTCTCACC+AGG - chr1.2:58238571-58238590 None:intergenic 40.0%
CAAGTACCACCTCAAAACAA+TGG + chr1.2:58238634-58238653 MS.gene066024:CDS 40.0%
CGATTTGCGTAAGAAGAATG+AGG + chr1.2:58238771-58238790 MS.gene066024:CDS 40.0%
GACCCTTTCATCCATTCAAT+TGG - chr1.2:58238817-58238836 None:intergenic 40.0%
GAGCAATATATGCACCACAA+AGG - chr1.2:58238534-58238553 None:intergenic 40.0%
! AGAAGAATGAGGCTCAGTTT+TGG + chr1.2:58238782-58238801 MS.gene066024:CDS 40.0%
! GGTGAGAACGTGTTTTCATT+TGG + chr1.2:58238571-58238590 MS.gene066024:CDS 40.0%
ACTCATTCTCACGCTTCTTC+TGG - chr1.2:58238747-58238766 None:intergenic 45.0%
GCTCTCATTGTATTCTCACC+TGG + chr1.2:58238550-58238569 MS.gene066024:CDS 45.0%
GTAAGCCTCAACGAATTGCA+TGG - chr1.2:58238662-58238681 None:intergenic 45.0%
!! AGAATGAGGCTCAGTTTTGG+TGG + chr1.2:58238785-58238804 MS.gene066024:CDS 45.0%
!! GAATGAGGCTCAGTTTTGGT+GGG + chr1.2:58238786-58238805 MS.gene066024:CDS 45.0%
!!! ATGGTGCCATTGTTTTGAGG+TGG - chr1.2:58238643-58238662 None:intergenic 45.0%
!!! TGCATGGTGCCATTGTTTTG+AGG - chr1.2:58238646-58238665 None:intergenic 45.0%
AGTGGCCTCTTCAAGAAAGC+TGG + chr1.2:58238496-58238515 MS.gene066024:CDS 50.0%
GCTCGCACAATTTAGCGCTA+CGG - chr1.2:58238684-58238703 None:intergenic 50.0%
TGGCACCATGCAATTCGTTG+AGG + chr1.2:58238654-58238673 MS.gene066024:CDS 50.0%
! GGTGGGCTTGTCCAATTGAA+TGG + chr1.2:58238803-58238822 MS.gene066024:CDS 50.0%
!! ACTTTCTCGAAGCGTCGTAG+TGG + chr1.2:58238478-58238497 MS.gene066024:CDS 50.0%
GCTCGCCAGCTTTCTTGAAG+AGG - chr1.2:58238504-58238523 None:intergenic 55.0%
GGCGAGCTTTGCACCCTTTG+TGG + chr1.2:58238517-58238536 MS.gene066024:CDS 60.0%


Chromosome Type Strat End Strand Name
chr1.2 gene 58238400 58238852 58238400 ID=MS.gene066024
chr1.2 mRNA 58238400 58238852 58238400 ID=MS.gene066024.t1;Parent=MS.gene066024
chr1.2 exon 58238400 58238852 58238400 ID=MS.gene066024.t1.exon1;Parent=MS.gene066024.t1
chr1.2 CDS 58238400 58238852 58238400 ID=cds.MS.gene066024.t1;Parent=MS.gene066024.t1
Gene Sequence

>MS.gene066024

ATGTCTAGCGGAAAGAAAAATCAAGGTCGCCAAAAAATTGACATGAAAAAAATGAGCAATGAGAGCAACTTGCAAGTGACTTTCTCGAAGCGTCGTAGTGGCCTCTTCAAGAAAGCTGGCGAGCTTTGCACCCTTTGTGGTGCATATATTGCTCTCATTGTATTCTCACCTGGTGAGAACGTGTTTTCATTTGGTTACCCAAATGTTGATACAATCATAGATCATTATCTCTCTCAAGTACCACCTCAAAACAATGGCACCATGCAATTCGTTGAGGCTTACCGTAGCGCTAAATTGTGCGAGCTTAATGCTATGCTGACTCAAATTAATGATGCACTGGACATCCAGAAGAAGCGTGAGAATGAGTTGAGCGATTTGCGTAAGAAGAATGAGGCTCAGTTTTGGTGGGCTTGTCCAATTGAATGGATGAAAGGGTCCAACTTCAATTATTAA
Protein sequence

>MS.gene066024.t1

MSSGKKNQGRQKIDMKKMSNESNLQVTFSKRRSGLFKKAGELCTLCGAYIALIVFSPGENVFSFGYPNVDTIIDHYLSQVPPQNNGTMQFVEAYRSAKLCELNAMLTQINDALDIQKKRENELSDLRKKNEAQFWWACPIEWMKGSNFNY