AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene066025

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene066025.t1 MTR_1g075600 91.983 237 19 0 1 237 1 237 5.23e-155 430
MS.gene066025.t1 MTR_1g077360 87.111 225 29 0 1 225 1 225 1.89e-145 405
MS.gene066025.t1 MTR_5g055100 70.464 237 70 0 1 237 1 237 1.72e-122 347
MS.gene066025.t1 MTR_2g085280 69.068 236 73 0 1 236 1 236 2.17e-117 335
MS.gene066025.t1 MTR_2g085250 69.068 236 73 0 1 236 1 236 7.07e-117 333
MS.gene066025.t1 MTR_8g043650 67.089 237 78 0 1 237 1 237 7.61e-116 331
MS.gene066025.t1 MTR_1g105920 70.320 219 65 0 1 219 1 219 1.37e-111 320
MS.gene066025.t1 MTR_2g030740 69.620 237 72 0 1 237 1 237 1.42e-111 320
MS.gene066025.t1 MTR_1g012570 68.354 237 75 0 1 237 1 237 9.58e-110 315
MS.gene066025.t1 MTR_5g045560 68.000 225 72 0 1 225 1 225 9.13e-109 313
MS.gene066025.t1 MTR_1g105910 66.222 225 76 0 1 225 1 225 1.53e-108 312
MS.gene066025.t1 MTR_5g053390 68.444 225 71 0 1 225 1 225 3.18e-108 311
MS.gene066025.t1 MTR_3g030770 65.106 235 64 3 1 225 1 227 4.47e-104 301
MS.gene066025.t1 MTR_1g108510 65.106 235 64 3 1 225 1 227 7.15e-104 300
MS.gene066025.t1 MTR_3g052920 68.018 222 71 0 1 222 1 222 7.54e-104 300
MS.gene066025.t1 MTR_0121s0080 62.025 237 89 1 1 237 1 236 3.00e-103 299
MS.gene066025.t1 MTR_1g105905 63.636 220 80 0 18 237 1 220 6.79e-100 290
MS.gene066025.t1 MTR_2g093190 63.404 235 68 3 1 225 1 227 7.37e-99 287
MS.gene066025.t1 MTR_1g108580 61.712 222 75 2 1 220 1 214 3.38e-95 278
MS.gene066025.t1 MTR_3g052870 64.384 219 59 2 1 219 1 200 1.04e-93 274
MS.gene066025.t1 MTR_1g106070 69.231 182 56 0 1 182 1 182 2.20e-90 264
MS.gene066025.t1 MTR_7g062350 58.296 223 91 2 16 237 27 248 1.39e-85 254
MS.gene066025.t1 MTR_1g075570 77.528 178 26 1 18 195 1 164 1.01e-83 246
MS.gene066025.t1 MTR_0121s0100 70.543 129 38 0 1 129 1 129 6.43e-57 177
MS.gene066025.t1 MTR_3g030780 67.969 128 41 0 1 128 1 128 3.04e-55 173
MS.gene066025.t1 MTR_3g080940 51.923 156 75 0 9 164 9 164 2.08e-52 169
MS.gene066025.t1 MTR_3g067910 72.816 103 28 0 21 123 2 104 2.21e-49 157
MS.gene066025.t1 MTR_2g105290 37.278 169 96 2 5 170 8 169 3.05e-31 113
MS.gene066025.t1 MTR_8g086290 38.037 163 91 2 5 164 8 163 5.19e-31 113
MS.gene066025.t1 MTR_3g067875 85.714 56 8 0 18 73 1 56 1.03e-27 101
MS.gene066025.t1 MTR_7g028448 40.625 160 83 3 5 164 8 155 2.61e-26 100
MS.gene066025.t1 MTR_4g036915 40.625 160 83 3 5 164 8 155 2.61e-26 100
MS.gene066025.t1 MTR_1g108500 57.732 97 20 1 22 118 110 185 4.60e-26 103
MS.gene066025.t1 MTR_3g067915 52.128 94 45 0 33 126 3 96 4.96e-25 95.1
MS.gene066025.t1 MTR_4g127140 37.430 179 92 5 5 170 8 179 1.73e-24 96.3
MS.gene066025.t1 MTR_3g067870 66.176 68 23 0 16 83 83 150 7.09e-23 91.3
MS.gene066025.t1 MTR_1g047550 56.338 71 31 0 9 79 2 72 6.73e-22 89.4
MS.gene066025.t1 MTR_4g131030 41.803 122 52 3 9 111 2 123 1.41e-21 89.4
MS.gene066025.t1 MTR_8g079502 54.930 71 32 0 9 79 2 72 4.77e-21 87.0
MS.gene066025.t1 MTR_8g051580 41.228 114 62 1 9 122 2 110 7.26e-21 86.7
MS.gene066025.t1 MTR_1g054265 49.367 79 40 0 9 87 2 80 2.92e-20 84.7
MS.gene066025.t1 MTR_1g063160 43.810 105 57 2 9 111 2 106 5.47e-20 84.3
MS.gene066025.t1 MTR_8g046350 49.383 81 40 1 9 89 2 81 2.80e-19 82.0
MS.gene066025.t1 MTR_4g102530 48.148 81 39 1 10 87 3 83 3.29e-18 80.1
MS.gene066025.t1 MTR_4g093970 59.091 66 27 0 10 75 29 94 3.68e-18 80.9
MS.gene066025.t1 MTR_4g094638 53.623 69 32 0 9 77 2 70 1.00e-17 78.2
MS.gene066025.t1 MTR_3g005530 51.471 68 33 0 9 76 2 69 1.02e-17 79.3
MS.gene066025.t1 MTR_3g452380 48.649 74 38 0 3 76 11 84 1.76e-17 79.0
MS.gene066025.t1 MTR_8g033220 47.368 76 40 0 10 85 3 78 2.19e-17 78.6
MS.gene066025.t1 MTR_8g033220 48.000 75 39 0 10 84 3 77 2.19e-17 78.6
MS.gene066025.t1 MTR_4g094632 39.048 105 62 1 9 113 2 104 6.37e-17 75.5
MS.gene066025.t1 MTR_8g033270 51.471 68 33 0 9 76 2 69 8.81e-17 77.4
MS.gene066025.t1 MTR_1g101970 51.471 68 33 0 9 76 2 69 1.48e-16 75.5
MS.gene066025.t1 MTR_6g464720 50.725 69 33 1 9 76 2 70 1.78e-16 76.3
MS.gene066025.t1 MTR_1g053070 48.148 81 42 0 9 89 2 82 2.63e-16 75.9
MS.gene066025.t1 MTR_8g087860 51.471 68 33 0 9 76 18 85 3.49e-16 75.5
MS.gene066025.t1 MTR_0003s0590 31.973 147 69 2 9 124 2 148 3.66e-16 75.5
MS.gene066025.t1 MTR_2g017865 31.351 185 85 3 9 164 17 188 3.95e-16 75.5
MS.gene066025.t1 MTR_7g075870 32.903 155 71 4 10 131 3 157 6.02e-16 74.3
MS.gene066025.t1 MTR_2g009890 47.887 71 37 0 9 79 2 72 1.01e-15 74.7
MS.gene066025.t1 MTR_4g109830 47.826 69 35 1 9 76 2 70 1.27e-15 73.9
MS.gene066025.t1 MTR_5g066180 45.588 68 37 0 9 76 2 69 1.30e-15 73.6
MS.gene066025.t1 MTR_6g015975 49.275 69 34 1 9 76 2 70 1.75e-15 73.6
MS.gene066025.t1 MTR_5g032150 47.059 68 36 0 9 76 2 69 1.82e-15 73.2
MS.gene066025.t1 MTR_5g032520 47.059 68 36 0 9 76 2 69 1.91e-15 73.2
MS.gene066025.t1 MTR_5g021270 40.179 112 59 4 9 114 2 111 2.67e-15 72.8
MS.gene066025.t1 MTR_5g021270 40.179 112 59 4 9 114 2 111 2.68e-15 72.8
MS.gene066025.t1 MTR_2g461710 55.357 56 25 0 9 64 2 57 3.87e-15 68.2
MS.gene066025.t1 MTR_7g016600 47.826 69 35 1 9 76 2 70 5.15e-15 72.4
MS.gene066025.t1 MTR_3g102570 42.857 105 57 3 9 112 2 104 5.99e-15 73.2
MS.gene066025.t1 MTR_7g075870 32.692 156 71 5 10 131 3 158 7.89e-15 71.2
MS.gene066025.t1 MTR_3g088615 45.714 70 36 1 9 76 2 71 8.84e-15 70.5
MS.gene066025.t1 MTR_4g084740 50.704 71 34 1 9 78 2 72 1.29e-14 72.4
MS.gene066025.t1 MTR_5g031000 45.588 68 37 0 9 76 2 69 1.37e-14 71.2
MS.gene066025.t1 MTR_5g031000 45.588 68 37 0 9 76 2 69 1.41e-14 70.9
MS.gene066025.t1 MTR_8g066260 31.507 146 70 3 9 124 2 147 2.19e-14 70.5
MS.gene066025.t1 MTR_7g016630 43.056 72 40 1 9 79 2 73 2.50e-14 70.5
MS.gene066025.t1 MTR_5g046870 47.826 69 35 1 9 76 2 70 2.70e-14 67.4
MS.gene066025.t1 MTR_1g029670 48.485 66 33 1 9 74 2 66 2.87e-14 68.9
MS.gene066025.t1 MTR_5g066960 47.368 57 30 0 9 65 2 58 4.57e-14 65.1
MS.gene066025.t1 MTR_3g084980 47.826 69 35 1 9 76 2 70 5.08e-14 69.7
MS.gene066025.t1 MTR_5g046790 50.877 57 28 0 9 65 2 58 5.51e-14 68.9
MS.gene066025.t1 MTR_7g075850 48.571 70 34 1 9 76 2 71 9.11e-14 68.9
MS.gene066025.t1 MTR_8g097090 46.377 69 36 1 9 76 2 70 9.48e-14 68.9
MS.gene066025.t1 MTR_8g022970 30.233 172 93 6 2 159 9 167 1.17e-13 67.4
MS.gene066025.t1 MTR_4g109810 50.877 57 28 0 9 65 2 58 1.91e-13 67.8
MS.gene066025.t1 MTR_1g038300 48.571 70 34 1 9 76 2 71 2.00e-13 67.8
MS.gene066025.t1 MTR_3g113030 47.619 63 33 0 9 71 2 64 2.30e-13 67.4
MS.gene066025.t1 MTR_4g093030 46.774 62 33 0 9 70 2 63 2.15e-12 63.5
MS.gene066025.t1 MTR_1g041615 35.514 107 56 2 20 126 17 110 2.48e-11 60.1
MS.gene066025.t1 MTR_3g437790 29.655 145 81 4 26 159 30 164 4.54e-11 60.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene066025.t1 AT5G60440 48.421 190 89 4 5 190 3 187 5.39e-50 165
MS.gene066025.t1 AT1G01530 42.105 190 102 3 4 192 2 184 1.21e-40 140
MS.gene066025.t1 AT4G36590 39.744 234 122 7 5 226 3 229 1.07e-38 135
MS.gene066025.t1 AT2G24840 47.239 163 79 3 9 167 63 222 5.74e-38 133
MS.gene066025.t1 AT1G65360 38.362 232 114 9 5 223 3 218 1.56e-36 129
MS.gene066025.t1 AT3G04100 30.114 176 107 3 2 167 7 176 1.01e-25 100
MS.gene066025.t1 AT1G72350 34.483 174 80 5 9 182 43 182 9.22e-23 92.8
MS.gene066025.t1 AT2G34440 42.342 111 63 1 9 119 2 111 3.17e-22 90.1
MS.gene066025.t1 AT3G66656 37.815 119 70 1 9 123 2 120 7.43e-20 84.0
MS.gene066025.t1 AT1G29962 28.571 175 119 3 5 173 4 178 1.73e-19 83.2
MS.gene066025.t1 AT5G51870 32.275 189 81 5 10 168 3 174 1.60e-18 81.3
MS.gene066025.t1 AT5G62165 36.364 143 62 4 10 123 3 145 1.82e-18 79.7
MS.gene066025.t1 AT5G62165 36.364 143 62 4 10 123 3 145 1.82e-18 79.7
MS.gene066025.t1 AT5G62165 36.364 143 62 4 10 123 3 145 1.82e-18 79.7
MS.gene066025.t1 AT5G51870 36.806 144 61 3 10 123 3 146 5.82e-18 80.1
MS.gene066025.t1 AT5G62165 35.417 144 64 4 10 124 3 146 6.00e-18 78.2
MS.gene066025.t1 AT5G62165 35.417 144 64 4 10 124 3 146 6.00e-18 78.2
MS.gene066025.t1 AT5G62165 35.417 144 64 4 10 124 3 146 6.00e-18 78.2
MS.gene066025.t1 AT5G62165 35.417 144 64 4 10 124 3 146 6.00e-18 78.2
MS.gene066025.t1 AT5G62165 35.417 144 64 4 10 124 3 146 6.00e-18 78.2
MS.gene066025.t1 AT5G51870 36.806 144 61 3 10 123 13 156 6.60e-18 80.1
MS.gene066025.t1 AT4G22950 47.222 72 38 0 10 81 3 74 6.90e-18 78.6
MS.gene066025.t1 AT2G45660 51.471 68 33 0 10 77 3 70 9.51e-18 77.8
MS.gene066025.t1 AT5G62165 35.664 143 63 3 10 123 3 145 9.52e-18 79.3
MS.gene066025.t1 AT5G62165 35.664 143 63 3 10 123 3 145 9.52e-18 79.3
MS.gene066025.t1 AT5G62165 35.664 143 63 3 10 123 3 145 9.52e-18 79.3
MS.gene066025.t1 AT2G45650 52.941 68 32 0 9 76 2 69 9.61e-18 80.1
MS.gene066025.t1 AT5G10140 52.174 69 32 1 9 76 2 70 1.02e-17 78.2
MS.gene066025.t1 AT4G22950 34.146 164 98 4 10 169 3 160 1.04e-17 79.3
MS.gene066025.t1 AT4G22950 34.146 164 98 4 10 169 3 160 1.04e-17 79.3
MS.gene066025.t1 AT4G09960 43.878 98 50 2 9 101 2 99 1.08e-17 79.0
MS.gene066025.t1 AT5G10140 52.174 69 32 1 9 76 2 70 1.17e-17 78.2
MS.gene066025.t1 AT4G09960 43.878 98 50 2 9 101 3 100 1.32e-17 79.3
MS.gene066025.t1 AT5G10140 52.174 69 32 1 9 76 2 70 1.33e-17 78.6
MS.gene066025.t1 AT4G09960 43.878 98 50 2 9 101 2 99 1.34e-17 79.3
MS.gene066025.t1 AT5G62165 35.000 160 70 5 10 135 3 162 1.61e-17 78.2
MS.gene066025.t1 AT5G62165 35.000 160 70 5 10 135 3 162 1.61e-17 78.2
MS.gene066025.t1 AT4G09960 43.878 98 50 2 9 101 12 109 1.73e-17 79.0
MS.gene066025.t1 AT2G45660 51.471 68 33 0 10 77 3 70 1.88e-17 78.6
MS.gene066025.t1 AT5G51870 35.616 146 64 3 5 120 21 166 2.59e-17 77.8
MS.gene066025.t1 AT5G62165 52.239 67 32 0 10 76 3 69 2.62e-17 75.1
MS.gene066025.t1 AT5G10140 52.174 69 32 1 9 76 2 70 2.63e-17 77.4
MS.gene066025.t1 AT5G51870 36.170 141 60 3 10 120 3 143 2.84e-17 77.0
MS.gene066025.t1 AT4G09960 43.878 98 50 2 9 101 28 125 3.06e-17 78.6
MS.gene066025.t1 AT4G18960 43.810 105 54 2 2 101 11 115 5.41e-17 77.8
MS.gene066025.t1 AT1G28460 27.907 172 121 1 5 173 4 175 6.67e-17 76.3
MS.gene066025.t1 AT4G09960 43.878 98 50 2 9 101 97 194 6.80e-17 78.6
MS.gene066025.t1 AT5G51860 31.579 190 89 4 10 169 3 181 7.28e-17 76.6
MS.gene066025.t1 AT3G57230 47.059 68 36 0 9 76 2 69 7.49e-17 75.1
MS.gene066025.t1 AT3G54340 42.342 111 57 4 9 114 2 110 9.43e-17 77.0
MS.gene066025.t1 AT5G51860 52.239 67 32 0 10 76 3 69 1.12e-16 76.3
MS.gene066025.t1 AT2G22540 50.000 68 34 0 9 76 2 69 1.48e-16 76.6
MS.gene066025.t1 AT2G22540 50.000 68 34 0 9 76 2 69 1.48e-16 76.6
MS.gene066025.t1 AT3G57230 47.059 68 36 0 9 76 2 69 2.12e-16 76.3
MS.gene066025.t1 AT3G57230 47.059 68 36 0 9 76 2 69 2.12e-16 76.3
MS.gene066025.t1 AT5G13790 52.941 68 32 0 9 76 2 69 2.43e-16 76.6
MS.gene066025.t1 AT5G13790 52.941 68 32 0 9 76 2 69 2.46e-16 76.3
MS.gene066025.t1 AT1G28450 28.000 175 120 3 5 173 4 178 3.37e-16 74.3
MS.gene066025.t1 AT4G37940 48.529 68 35 0 9 76 2 69 4.08e-16 74.7
MS.gene066025.t1 AT4G37940 48.529 68 35 0 9 76 2 69 4.12e-16 75.1
MS.gene066025.t1 AT4G37940 48.529 68 35 0 9 76 2 69 5.27e-16 73.6
MS.gene066025.t1 AT2G42830 44.737 76 42 0 1 76 9 84 5.47e-16 75.1
MS.gene066025.t1 AT2G42830 44.737 76 42 0 1 76 9 84 6.04e-16 75.1
MS.gene066025.t1 AT2G22630 48.529 68 35 0 9 76 2 69 6.47e-16 74.7
MS.gene066025.t1 AT2G22630 48.529 68 35 0 9 76 2 69 6.47e-16 74.7
MS.gene066025.t1 AT3G57390 50.000 68 34 0 9 76 2 69 6.88e-16 74.3
MS.gene066025.t1 AT3G58780 48.529 68 35 0 9 76 17 84 8.43e-16 74.7
MS.gene066025.t1 AT4G24540 50.000 68 34 0 9 76 2 69 8.59e-16 73.9
MS.gene066025.t1 AT1G22130 41.414 99 57 1 9 106 2 100 9.38e-16 75.5
MS.gene066025.t1 AT1G77980 45.455 88 47 1 9 95 2 89 1.01e-15 75.5
MS.gene066025.t1 AT3G58780 48.529 68 35 0 9 76 23 90 1.01e-15 74.3
MS.gene066025.t1 AT3G30260 32.192 146 69 5 9 124 2 147 1.11e-15 74.3
MS.gene066025.t1 AT5G23260 52.000 75 34 1 5 77 14 88 1.14e-15 74.7
MS.gene066025.t1 AT5G23260 52.000 75 34 1 5 77 14 88 1.32e-15 74.3
MS.gene066025.t1 AT3G57390 50.000 68 34 0 9 76 2 69 1.56e-15 73.9
MS.gene066025.t1 AT3G58780 45.333 75 41 0 2 76 10 84 1.65e-15 74.3
MS.gene066025.t1 AT5G60910 30.244 205 99 7 9 179 2 196 2.55e-15 73.2
MS.gene066025.t1 AT5G65050 49.275 69 34 1 9 76 2 70 3.10e-15 71.6
MS.gene066025.t1 AT5G23260 53.521 71 31 1 9 77 2 72 3.72e-15 72.8
MS.gene066025.t1 AT5G23260 53.521 71 31 1 9 77 2 72 4.03e-15 72.4
MS.gene066025.t1 AT5G65050 34.328 134 63 5 9 124 2 128 4.78e-15 71.2
MS.gene066025.t1 AT2G22540 50.000 68 29 1 9 76 2 64 5.01e-15 72.4
MS.gene066025.t1 AT5G65050 33.571 140 67 5 9 124 2 139 5.60e-15 71.2
MS.gene066025.t1 AT1G77950 47.887 71 36 1 9 78 2 72 5.90e-15 72.4
MS.gene066025.t1 AT1G77950 47.887 71 36 1 9 78 2 72 5.90e-15 72.4
MS.gene066025.t1 AT1G77950 47.887 71 36 1 9 78 2 72 5.90e-15 72.4
MS.gene066025.t1 AT1G77950 47.887 71 36 1 9 78 2 72 5.90e-15 72.4
MS.gene066025.t1 AT4G11880 47.222 72 37 1 10 80 3 74 6.03e-15 70.9
MS.gene066025.t1 AT4G11880 47.222 72 37 1 10 80 3 74 6.03e-15 70.9
MS.gene066025.t1 AT5G65050 49.275 69 34 1 9 76 2 70 6.36e-15 71.2
MS.gene066025.t1 AT3G61120 50.000 68 34 0 9 76 2 69 8.01e-15 72.0
MS.gene066025.t1 AT1G47760 38.835 103 49 2 9 111 2 90 8.32e-15 70.5
MS.gene066025.t1 AT4G11880 47.222 72 37 1 10 80 3 74 9.68e-15 71.2
MS.gene066025.t1 AT4G11880 47.222 72 37 1 10 80 3 74 9.68e-15 71.2
MS.gene066025.t1 AT1G17310 51.899 79 36 1 8 86 47 123 1.01e-14 71.2
MS.gene066025.t1 AT5G15800 47.826 69 35 1 9 76 2 70 1.14e-14 71.6
MS.gene066025.t1 AT1G69120 31.757 148 83 4 9 155 2 132 1.16e-14 71.2
MS.gene066025.t1 AT5G20240 47.143 70 35 1 9 76 2 71 1.33e-14 69.3
MS.gene066025.t1 AT1G26310 47.826 69 35 1 9 76 2 70 1.38e-14 71.2
MS.gene066025.t1 AT1G17310 51.899 79 36 1 8 86 58 134 1.39e-14 70.9
MS.gene066025.t1 AT2G14210 46.377 69 36 1 9 76 2 70 1.59e-14 70.9
MS.gene066025.t1 AT5G15800 47.826 69 35 1 9 76 2 70 1.73e-14 71.2
MS.gene066025.t1 AT5G20240 47.143 70 35 1 9 76 2 71 1.73e-14 70.1
MS.gene066025.t1 AT1G69120 31.757 148 83 4 9 155 2 132 1.94e-14 70.9
MS.gene066025.t1 AT2G14210 46.377 69 36 1 9 76 2 70 1.95e-14 70.5
MS.gene066025.t1 AT3G58780 29.775 178 90 4 9 164 17 181 2.00e-14 70.9
MS.gene066025.t1 AT5G65070 33.557 149 86 4 9 152 2 142 2.61e-14 68.6
MS.gene066025.t1 AT5G65060 46.377 69 36 1 9 76 2 70 4.05e-14 68.9
MS.gene066025.t1 AT5G65070 43.478 69 38 1 9 76 2 70 4.58e-14 68.9
MS.gene066025.t1 AT5G65060 46.377 69 36 1 9 76 2 70 4.59e-14 68.9
MS.gene066025.t1 AT5G65060 46.377 69 36 1 9 76 2 70 4.80e-14 68.6
MS.gene066025.t1 AT2G03710 55.357 56 25 0 9 64 2 57 5.37e-14 68.6
MS.gene066025.t1 AT3G02310 46.377 69 36 1 9 76 2 70 7.45e-14 68.6
MS.gene066025.t1 AT3G02310 46.377 69 36 1 9 76 2 70 8.55e-14 68.9
MS.gene066025.t1 AT5G65070 43.478 69 38 1 9 76 2 70 9.30e-14 68.6
MS.gene066025.t1 AT1G24260 46.377 69 36 1 9 76 2 70 1.11e-13 68.6
MS.gene066025.t1 AT1G24260 46.377 69 36 1 9 76 2 70 1.16e-13 68.6
MS.gene066025.t1 AT1G24260 46.377 69 36 1 9 76 2 70 1.17e-13 68.6
MS.gene066025.t1 AT5G65070 43.478 69 38 1 9 76 2 70 1.31e-13 67.8
MS.gene066025.t1 AT2G03710 55.357 56 25 0 9 64 2 57 1.35e-13 68.6
MS.gene066025.t1 AT2G03710 55.357 56 25 0 9 64 2 57 1.38e-13 68.6
MS.gene066025.t1 AT3G58780 46.875 64 34 0 2 65 10 73 2.22e-13 68.2
MS.gene066025.t1 AT5G65080 30.345 145 80 4 1 124 1 145 5.48e-13 66.2
MS.gene066025.t1 AT5G65070 46.667 60 32 0 9 68 2 61 6.42e-13 66.2
MS.gene066025.t1 AT5G65080 29.452 146 81 4 1 124 1 146 6.77e-13 65.5
MS.gene066025.t1 AT1G71692 44.286 70 38 1 9 77 2 71 1.07e-12 65.5
MS.gene066025.t1 AT5G27130 48.148 81 37 3 5 81 10 89 1.63e-12 66.2
MS.gene066025.t1 AT5G49490 29.461 241 105 11 5 215 41 246 1.19e-11 63.5
MS.gene066025.t1 AT1G46408 36.000 125 71 5 7 122 2 126 3.24e-11 62.0
MS.gene066025.t1 AT2G26320 40.541 74 42 1 5 76 14 87 3.40e-11 58.9
MS.gene066025.t1 AT4G37435 48.214 56 29 0 9 64 2 57 6.54e-11 60.1
MS.gene066025.t1 AT1G77080 49.275 69 34 1 9 76 2 70 9.10e-11 59.3
MS.gene066025.t1 AT1G77080 49.275 69 34 1 9 76 2 70 9.38e-11 59.3

Find 54 sgRNAs with CRISPR-Local

Find 66 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGCATTAAGCTCGCGCAATT+TGG 0.231826 1.2:-58260453 None:intergenic
ATTGAAGCTTCTTGATGATT+TGG 0.278070 1.2:-58260752 None:intergenic
ATTGCAAGATCCCATTGTTT+TGG 0.301551 1.2:-58260409 None:intergenic
TTGTTTGGTTTCAACAATAT+AGG 0.376703 1.2:+58260818 MS.gene066025:CDS
AGCGAGCTTTGCACCCTTTG+TGG 0.378424 1.2:+58260281 MS.gene066025:CDS
ATGTTGCAACCTCATTTGTT+TGG 0.384083 1.2:+58260803 MS.gene066025:CDS
GACCTTATCCATCCCTTCAA+TGG 0.393032 1.2:-58260579 None:intergenic
TGTTGGTATGGTTGTAAGTC+AGG 0.400193 1.2:+58260658 MS.gene066025:CDS
TGGTGGGCTTGTCCCATTGA+AGG 0.408921 1.2:+58260566 MS.gene066025:CDS
TCTATGACCGTATAGACATC+TGG 0.410197 1.2:-58260362 None:intergenic
AGAAGAATGAGGCTCAGTTT+TGG 0.412014 1.2:+58260546 MS.gene066025:CDS
GATGGTGGACATGGTCCCTC+TGG 0.456482 1.2:+58260845 MS.gene066025:CDS
AAGCTTCTTGATGATTTGGC+TGG 0.457989 1.2:-58260748 None:intergenic
ACCTTATCCATCCCTTCAAT+GGG 0.468641 1.2:-58260578 None:intergenic
CATAGACCGTTATCTCTCTC+AGG 0.489608 1.2:+58260379 MS.gene066025:CDS
TGGCTACCCAGATGTCTATA+CGG 0.493780 1.2:+58260355 MS.gene066025:CDS
AACAAATGAGGTTGCAACAT+AGG 0.496587 1.2:-58260800 None:intergenic
TGTATTCTCACCTAGTGATA+AGG 0.498147 1.2:+58260322 MS.gene066025:CDS
TCCCATTGAAGGGATGGATA+AGG 0.507796 1.2:+58260577 MS.gene066025:CDS
AGCAATATATGCACCACAAA+GGG 0.513172 1.2:-58260294 None:intergenic
AGGTCCCACTCCAAAACAAT+GGG 0.517473 1.2:+58260399 MS.gene066025:CDS
ACAAATGAGGTTGCAACATA+GGG 0.527904 1.2:-58260799 None:intergenic
GGCTTGTCCCATTGAAGGGA+TGG 0.531760 1.2:+58260571 MS.gene066025:CDS
TTTGGTTTCAACAATATAGG+AGG 0.541850 1.2:+58260821 MS.gene066025:CDS
GGTGGGCTTGTCCCATTGAA+GGG 0.542115 1.2:+58260567 MS.gene066025:CDS
TTCAACAATATAGGAGGAGA+TGG 0.553417 1.2:+58260827 MS.gene066025:CDS
TTGTTGAAACCAAACAAATG+AGG 0.558095 1.2:-58260812 None:intergenic
GTGGGACCTGAGAGAGATAA+CGG 0.559782 1.2:-58260385 None:intergenic
CAGGTCCCACTCCAAAACAA+TGG 0.563813 1.2:+58260398 MS.gene066025:CDS
TGATTTGGCTGGTGCTCGAT+AGG 0.567200 1.2:-58260737 None:intergenic
ACTTTCTCGAAGCGTCGTAG+TGG 0.570157 1.2:+58260242 MS.gene066025:CDS
ATCATGTCGAGTGGAAAGAA+AGG 0.570415 1.2:+58260161 None:intergenic
TGGGATCTTGCAATTCATTG+AGG 0.581064 1.2:+58260418 MS.gene066025:CDS
ACTCAAATCAACGATGCACT+AGG 0.586796 1.2:+58260482 MS.gene066025:CDS
CTATGACCGTATAGACATCT+GGG 0.586976 1.2:-58260361 None:intergenic
CGATTTATGCAAGAAGAATG+AGG 0.588461 1.2:+58260535 MS.gene066025:CDS
ATAGGGTTCTGACAAAATCC+AGG 0.592191 1.2:-58260782 None:intergenic
GTGCTCGATAGGCATGGTAG+AGG 0.592462 1.2:-58260726 None:intergenic
TGTGCTTCAATCATGTCGAG+TGG 0.596376 1.2:+58260152 None:intergenic
AAACGAATTGCAGAACATGT+TGG 0.599135 1.2:+58260641 MS.gene066025:CDS
AATTGCAGAACATGTTGGTA+TGG 0.601458 1.2:+58260646 MS.gene066025:CDS
GTTGGTATGGTTGTAAGTCA+GGG 0.608714 1.2:+58260659 MS.gene066025:CDS
GCTCGCGCAATTTGGCGCTG+CGG 0.612951 1.2:-58260445 None:intergenic
ATAGGAGGAGATGGTGGACA+TGG 0.613263 1.2:+58260836 MS.gene066025:CDS
GGTTCTGACAAAATCCAGGC+GGG 0.613799 1.2:-58260778 None:intergenic
AACAATATAGGAGGAGATGG+TGG 0.621356 1.2:+58260830 MS.gene066025:CDS
AATGAAAACACCTTATCACT+AGG 0.625532 1.2:-58260332 None:intergenic
TGGCTGGTGCTCGATAGGCA+TGG 0.627452 1.2:-58260732 None:intergenic
TCGAGTGGAAAGAAAGGTCA+AGG 0.628900 1.2:+58260167 MS.gene066025:CDS
GAGCAATATATGCACCACAA+AGG 0.643897 1.2:-58260295 None:intergenic
TTGGTATGGTTGTAAGTCAG+GGG 0.657692 1.2:+58260660 MS.gene066025:CDS
TTGGATCAATAGAATCCAGA+GGG 0.672575 1.2:-58260860 None:intergenic
CTTGGATCAATAGAATCCAG+AGG 0.702259 1.2:-58260861 None:intergenic
GGGTTCTGACAAAATCCAGG+CGG 0.715161 1.2:-58260779 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTATTGAAAAATGCTTTGT+TGG + chr1.2:58260610-58260629 MS.gene066025:CDS 20.0%
!!! CATTTTTCAATAATTGAAGT+TGG - chr1.2:58260604-58260623 None:intergenic 20.0%
!! TTGTTTGGTTTCAACAATAT+AGG + chr1.2:58260818-58260837 MS.gene066025:CDS 25.0%
AATGAAAACACCTTATCACT+AGG - chr1.2:58260335-58260354 None:intergenic 30.0%
TTGTTGAAACCAAACAAATG+AGG - chr1.2:58260815-58260834 None:intergenic 30.0%
! ATTGAAGCTTCTTGATGATT+TGG - chr1.2:58260755-58260774 None:intergenic 30.0%
! TTTGGTTTCAACAATATAGG+AGG + chr1.2:58260821-58260840 MS.gene066025:CDS 30.0%
!! AGTGATAAGGTGTTTTCATT+TGG + chr1.2:58260335-58260354 MS.gene066025:CDS 30.0%
AAACGAATTGCAGAACATGT+TGG + chr1.2:58260641-58260660 MS.gene066025:CDS 35.0%
AACAAAAAACGGAAGGGTTT+GGG - chr1.2:58260693-58260712 None:intergenic 35.0%
AACAAATGAGGTTGCAACAT+AGG - chr1.2:58260803-58260822 None:intergenic 35.0%
AATTGCAGAACATGTTGGTA+TGG + chr1.2:58260646-58260665 MS.gene066025:CDS 35.0%
ACAAATGAGGTTGCAACATA+GGG - chr1.2:58260802-58260821 None:intergenic 35.0%
AGCAATATATGCACCACAAA+GGG - chr1.2:58260297-58260316 None:intergenic 35.0%
ATGTTGCAACCTCATTTGTT+TGG + chr1.2:58260803-58260822 MS.gene066025:CDS 35.0%
ATTGCCAACAAAAAACGGAA+GGG - chr1.2:58260699-58260718 None:intergenic 35.0%
CGATTTATGCAAGAAGAATG+AGG + chr1.2:58260535-58260554 MS.gene066025:CDS 35.0%
GAACCATTGCCAACAAAAAA+CGG - chr1.2:58260704-58260723 None:intergenic 35.0%
TGTATTCTCACCTAGTGATA+AGG + chr1.2:58260322-58260341 MS.gene066025:CDS 35.0%
TTCAACAATATAGGAGGAGA+TGG + chr1.2:58260827-58260846 MS.gene066025:CDS 35.0%
! ATTGCAAGATCCCATTGTTT+TGG - chr1.2:58260412-58260431 None:intergenic 35.0%
AACAATATAGGAGGAGATGG+TGG + chr1.2:58260830-58260849 MS.gene066025:CDS 40.0%
ACCTTATCCATCCCTTCAAT+GGG - chr1.2:58260581-58260600 None:intergenic 40.0%
ACTCAAATCAACGATGCACT+AGG + chr1.2:58260482-58260501 MS.gene066025:CDS 40.0%
CAACAAAAAACGGAAGGGTT+TGG - chr1.2:58260694-58260713 None:intergenic 40.0%
CATTGCCAACAAAAAACGGA+AGG - chr1.2:58260700-58260719 None:intergenic 40.0%
CTATGACCGTATAGACATCT+GGG - chr1.2:58260364-58260383 None:intergenic 40.0%
GAGCAATATATGCACCACAA+AGG - chr1.2:58260298-58260317 None:intergenic 40.0%
GTTGGTATGGTTGTAAGTCA+GGG + chr1.2:58260659-58260678 MS.gene066025:CDS 40.0%
TCTATGACCGTATAGACATC+TGG - chr1.2:58260365-58260384 None:intergenic 40.0%
TGGGATCTTGCAATTCATTG+AGG + chr1.2:58260418-58260437 MS.gene066025:CDS 40.0%
TGTTGGTATGGTTGTAAGTC+AGG + chr1.2:58260658-58260677 MS.gene066025:CDS 40.0%
TTGGTATGGTTGTAAGTCAG+GGG + chr1.2:58260660-58260679 MS.gene066025:CDS 40.0%
! AAGCTTCTTGATGATTTGGC+TGG - chr1.2:58260751-58260770 None:intergenic 40.0%
! AGAAGAATGAGGCTCAGTTT+TGG + chr1.2:58260546-58260565 MS.gene066025:CDS 40.0%
! ATAGGGTTCTGACAAAATCC+AGG - chr1.2:58260785-58260804 None:intergenic 40.0%
!!! AAGATCCCATTGTTTTGGAG+TGG - chr1.2:58260407-58260426 None:intergenic 40.0%
!!! AGATCCCATTGTTTTGGAGT+GGG - chr1.2:58260406-58260425 None:intergenic 40.0%
!!! CAAACCCTTCCGTTTTTTGT+TGG + chr1.2:58260692-58260711 MS.gene066025:CDS 40.0%
!!! CTTCCGTTTTTTGTTGGCAA+TGG + chr1.2:58260698-58260717 MS.gene066025:CDS 40.0%
AAAAACGGAAGGGTTTGGGT+AGG - chr1.2:58260689-58260708 None:intergenic 45.0%
AGCATTAAGCTCGCGCAATT+TGG - chr1.2:58260456-58260475 None:intergenic 45.0%
AGGTCCCACTCCAAAACAAT+GGG + chr1.2:58260399-58260418 MS.gene066025:CDS 45.0%
CATAGACCGTTATCTCTCTC+AGG + chr1.2:58260379-58260398 MS.gene066025:CDS 45.0%
GACCTTATCCATCCCTTCAA+TGG - chr1.2:58260582-58260601 None:intergenic 45.0%
TCCCATTGAAGGGATGGATA+AGG + chr1.2:58260577-58260596 MS.gene066025:CDS 45.0%
TCGAGTGGAAAGAAAGGTCA+AGG + chr1.2:58260167-58260186 MS.gene066025:CDS 45.0%
TGGCTACCCAGATGTCTATA+CGG + chr1.2:58260355-58260374 MS.gene066025:CDS 45.0%
!! AGAATGAGGCTCAGTTTTGG+TGG + chr1.2:58260549-58260568 MS.gene066025:CDS 45.0%
!! GAATGAGGCTCAGTTTTGGT+GGG + chr1.2:58260550-58260569 MS.gene066025:CDS 45.0%
CAGGTCCCACTCCAAAACAA+TGG + chr1.2:58260398-58260417 MS.gene066025:CDS 50.0%
GTGGGACCTGAGAGAGATAA+CGG - chr1.2:58260388-58260407 None:intergenic 50.0%
! GAAGCTTCAATTTTCCCGCC+TGG + chr1.2:58260764-58260783 MS.gene066025:CDS 50.0%
! GGGTTCTGACAAAATCCAGG+CGG - chr1.2:58260782-58260801 None:intergenic 50.0%
! GGTTCTGACAAAATCCAGGC+GGG - chr1.2:58260781-58260800 None:intergenic 50.0%
! TGATTTGGCTGGTGCTCGAT+AGG - chr1.2:58260740-58260759 None:intergenic 50.0%
!! ACTTTCTCGAAGCGTCGTAG+TGG + chr1.2:58260242-58260261 MS.gene066025:CDS 50.0%
!! ATAGGAGGAGATGGTGGACA+TGG + chr1.2:58260836-58260855 MS.gene066025:CDS 50.0%
AGCGAGCTTTGCACCCTTTG+TGG + chr1.2:58260281-58260300 MS.gene066025:CDS 55.0%
GGCTTGTCCCATTGAAGGGA+TGG + chr1.2:58260571-58260590 MS.gene066025:CDS 55.0%
GTGCTCGATAGGCATGGTAG+AGG - chr1.2:58260729-58260748 None:intergenic 55.0%
! GGTGGGCTTGTCCCATTGAA+GGG + chr1.2:58260567-58260586 MS.gene066025:CDS 55.0%
!! TGGTGGGCTTGTCCCATTGA+AGG + chr1.2:58260566-58260585 MS.gene066025:CDS 55.0%
TGGCTGGTGCTCGATAGGCA+TGG - chr1.2:58260735-58260754 None:intergenic 60.0%
!! GATGGTGGACATGGTCCCTC+TGG + chr1.2:58260845-58260864 MS.gene066025:CDS 60.0%
GCTCGCGCAATTTGGCGCTG+CGG - chr1.2:58260448-58260467 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr1.2 gene 58260164 58260877 58260164 ID=MS.gene066025
chr1.2 mRNA 58260164 58260877 58260164 ID=MS.gene066025.t1;Parent=MS.gene066025
chr1.2 exon 58260164 58260877 58260164 ID=MS.gene066025.t1.exon1;Parent=MS.gene066025.t1
chr1.2 CDS 58260164 58260877 58260164 ID=cds.MS.gene066025.t1;Parent=MS.gene066025.t1
Gene Sequence

>MS.gene066025

ATGTCGAGTGGAAAGAAAGGTCAAGGTCGCAAAAAAATTGAGATGAAAAAAATGAGCAATGAGAGCAATTTGCAAGTGACTTTCTCGAAGCGTCGTAGTGGACTCTTCAAGAAAGCGAGCGAGCTTTGCACCCTTTGTGGTGCATATATTGCTCTCATTGTATTCTCACCTAGTGATAAGGTGTTTTCATTTGGCTACCCAGATGTCTATACGGTCATAGACCGTTATCTCTCTCAGGTCCCACTCCAAAACAATGGGATCTTGCAATTCATTGAGGCTCACCGCAGCGCCAAATTGCGCGAGCTTAATGCTATGTTAACTCAAATCAACGATGCACTAGGCATCGAAAAGAAGCGCAAGAATGAGCTGATCGATTTATGCAAGAAGAATGAGGCTCAGTTTTGGTGGGCTTGTCCCATTGAAGGGATGGATAAGGTCCAACTTCAATTATTGAAAAATGCTTTGTTGGATCTTAAGAAACGAATTGCAGAACATGTTGGTATGGTTGTAAGTCAGGGGACTCCTACCCAAACCCTTCCGTTTTTTGTTGGCAATGGTTCGTCCTCTACCATGCCTATCGAGCACCAGCCAAATCATCAAGAAGCTTCAATTTTCCCGCCTGGATTTTGTCAGAACCCTATGTTGCAACCTCATTTGTTTGGTTTCAACAATATAGGAGGAGATGGTGGACATGGTCCCTCTGGATTCTATTGA
Protein sequence

>MS.gene066025.t1

MSSGKKGQGRKKIEMKKMSNESNLQVTFSKRRSGLFKKASELCTLCGAYIALIVFSPSDKVFSFGYPDVYTVIDRYLSQVPLQNNGILQFIEAHRSAKLRELNAMLTQINDALGIEKKRKNELIDLCKKNEAQFWWACPIEGMDKVQLQLLKNALLDLKKRIAEHVGMVVSQGTPTQTLPFFVGNGSSSTMPIEHQPNHQEASIFPPGFCQNPMLQPHLFGFNNIGGDGGHGPSGFY