AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene066095

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene066095.t1 MTR_4g107850 96.413 892 31 1 78 968 147 1038 0.0 1781
MS.gene066095.t1 MTR_4g107850 78.378 111 22 1 1 109 3 113 2.05e-43 171
MS.gene066095.t1 MTR_6g028050 54.617 758 305 14 233 968 286 1026 0.0 835
MS.gene066095.t1 MTR_6g028050 40.171 117 61 1 13 129 3 110 1.02e-17 89.4
MS.gene066095.t1 MTR_7g092770 52.964 776 319 14 220 968 19 775 0.0 809
MS.gene066095.t1 MTR_0305s0020 52.842 774 325 12 218 968 18 774 0.0 804
MS.gene066095.t1 MTR_3g027150 51.415 813 328 18 205 968 28 822 0.0 796
MS.gene066095.t1 MTR_5g010390 51.905 761 323 13 233 968 265 1007 0.0 791
MS.gene066095.t1 MTR_5g010390 49.383 81 41 0 16 96 5 85 5.79e-16 83.6
MS.gene066095.t1 MTR_4g023460 50.948 791 336 16 211 968 371 1142 0.0 781
MS.gene066095.t1 MTR_4g066150 52.625 762 311 15 233 968 33 770 0.0 770
MS.gene066095.t1 MTR_0291s0010 50.522 766 332 15 233 968 49 797 0.0 754
MS.gene066095.t1 MTR_8g031270 48.293 791 354 15 205 968 241 1003 0.0 744
MS.gene066095.t1 MTR_8g031270 54.098 61 28 0 16 76 5 65 3.82e-13 74.3
MS.gene066095.t1 MTR_6g027540 50.330 757 334 13 233 968 274 1009 0.0 741
MS.gene066095.t1 MTR_6g027540 50.588 85 42 0 13 97 8 92 1.89e-20 98.2
MS.gene066095.t1 MTR_4g033215 49.673 765 334 17 233 968 302 1044 0.0 729
MS.gene066095.t1 MTR_4g033215 36.170 94 60 0 14 107 1 94 1.29e-11 69.3
MS.gene066095.t1 MTR_7g076900 47.882 779 331 17 233 968 267 1013 0.0 714
MS.gene066095.t1 MTR_7g076900 40.000 80 48 0 16 95 5 84 4.88e-12 70.9
MS.gene066095.t1 MTR_4g057675 44.129 809 384 17 202 968 1 783 0.0 614
MS.gene066095.t1 MTR_4g071870 42.892 809 360 18 202 968 1 749 0.0 586
MS.gene066095.t1 MTR_1g015540 40.708 791 407 20 209 962 2 767 6.67e-179 538
MS.gene066095.t1 MTR_5g096980 37.185 753 439 13 234 968 27 763 1.64e-156 480
MS.gene066095.t1 MTR_4g023250 53.077 130 59 1 838 967 1 128 2.25e-39 142
MS.gene066095.t1 MTR_4g023230 39.344 122 59 1 755 876 49 155 1.35e-23 98.6
MS.gene066095.t1 MTR_6g028070 45.652 92 50 0 13 104 3 94 1.51e-17 82.8
MS.gene066095.t1 MTR_4g023390 37.037 108 46 1 836 943 11 96 1.68e-14 70.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene066095.t1 AT1G74720 73.553 881 190 8 124 968 208 1081 0.0 1326
MS.gene066095.t1 AT1G74720 49.624 133 54 3 1 129 1 124 7.48e-30 128
MS.gene066095.t1 AT5G17980 55.333 750 305 12 233 968 316 1049 0.0 839
MS.gene066095.t1 AT5G17980 38.926 149 80 3 13 159 3 142 2.47e-18 91.3
MS.gene066095.t1 AT4G11610 43.627 1020 489 18 16 968 7 1007 0.0 831
MS.gene066095.t1 AT4G11610 43.482 1028 483 20 16 968 7 1011 0.0 831
MS.gene066095.t1 AT3G57880 52.781 773 326 12 218 968 18 773 0.0 809
MS.gene066095.t1 AT3G57880 52.781 773 326 12 218 968 18 773 0.0 809
MS.gene066095.t1 AT3G57880 52.781 773 326 12 218 968 18 773 0.0 809
MS.gene066095.t1 AT3G57880 52.781 773 326 12 218 968 18 773 0.0 809
MS.gene066095.t1 AT3G03680 43.064 1038 486 23 12 968 4 1017 0.0 804
MS.gene066095.t1 AT1G51570 52.632 779 321 15 218 968 18 776 0.0 801
MS.gene066095.t1 AT5G06850 52.005 773 325 14 225 968 39 794 0.0 783
MS.gene066095.t1 AT5G12970 50.759 790 345 14 202 968 1 769 0.0 780
MS.gene066095.t1 AT4G11610 47.073 837 385 14 171 968 57 874 0.0 773
MS.gene066095.t1 AT5G48060 46.984 862 390 18 153 968 196 1036 0.0 759
MS.gene066095.t1 AT1G22610 50.131 764 332 17 233 968 287 1029 0.0 724
MS.gene066095.t1 AT1G22610 54.286 70 32 0 14 83 1 70 8.19e-16 83.2
MS.gene066095.t1 AT1G04150 49.305 791 356 16 208 968 237 1012 0.0 719
MS.gene066095.t1 AT1G04150 44.444 81 45 0 16 96 12 92 1.48e-13 75.9
MS.gene066095.t1 AT4G00700 40.914 1029 505 22 16 968 5 1006 0.0 713
MS.gene066095.t1 AT4G00700 40.914 1029 505 22 16 968 5 1006 0.0 713
MS.gene066095.t1 AT4G20080 49.072 754 348 14 233 968 39 774 0.0 702
MS.gene066095.t1 AT3G61300 47.754 779 358 18 212 968 221 972 0.0 697
MS.gene066095.t1 AT3G61720 35.019 791 430 24 233 968 34 795 4.85e-127 404
MS.gene066095.t1 AT5G03435 36.667 780 419 24 212 962 7 740 1.12e-126 401
MS.gene066095.t1 AT5G03435 37.801 582 305 17 212 768 7 556 1.63e-101 329
MS.gene066095.t1 AT5G44760 39.730 370 179 10 233 594 31 364 1.05e-69 240
MS.gene066095.t1 AT5G44760 30.137 146 53 1 725 870 355 451 2.78e-14 77.0

Find 304 sgRNAs with CRISPR-Local

Find 353 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGAACTTCCTTGACCATCTT+TGG 0.198935 8.4:-19362752 None:intergenic
TCGAAACGGCTTGAAGAAAA+TGG 0.209811 8.4:+19364871 MS.gene066095:CDS
TGCAAGGGTGCAAACTGTTT+TGG 0.239098 8.4:+19365498 MS.gene066095:CDS
ATTAGAGTGAAGGTACAATT+AGG 0.242637 8.4:+19364137 MS.gene066095:CDS
ATTCTTGAACTTGGAATCTT+AGG 0.246117 8.4:+19364527 MS.gene066095:CDS
CGTTTCTGACCCGGAGAATA+TGG 0.261356 8.4:+19362873 MS.gene066095:CDS
AAAATGGTTGCTGTGGCTTT+AGG 0.266507 8.4:+19365643 MS.gene066095:CDS
GTTCCATTCCGGCGAGTCAT+TGG 0.269436 8.4:-19363703 None:intergenic
CGCCAATCTTCTCACCGTTT+GGG 0.269793 8.4:-19362698 None:intergenic
CTATTCAGTGCCTCCTAAAA+TGG 0.270464 8.4:+19365627 MS.gene066095:CDS
CCGCCAATCTTCTCACCGTT+TGG 0.293001 8.4:-19362699 None:intergenic
GAAGCTATCCGTTACGGTTC+GGG 0.294645 8.4:-19364645 None:intergenic
TAGCTCCAAACCACCTGATT+TGG 0.312359 8.4:+19365441 MS.gene066095:CDS
TACTTTACTTGGTCCTTGTT+TGG 0.312550 8.4:+19365257 MS.gene066095:CDS
CACAAGTTCATATCCATTAC+TGG 0.313298 8.4:+19364841 MS.gene066095:CDS
GCATCTGAACTCCATGCTTC+TGG 0.314338 8.4:-19363987 None:intergenic
TGAAGAGGGAAGAGTTTATC+AGG 0.320697 8.4:+19363227 MS.gene066095:CDS
TGATGATGATACTGCATTTC+CGG 0.323781 8.4:-19363387 None:intergenic
TTCACCGCGAGTGGTGGTTT+TGG 0.325194 8.4:+19363293 MS.gene066095:CDS
GATCAAAGCCCGCGAGTTAT+AGG 0.327596 8.4:+19363670 MS.gene066095:CDS
GTCCCACCGCGAAATCTCTA+TGG 0.335869 8.4:+19364489 MS.gene066095:CDS
CCAGTTGGAATTCTTGAACT+TGG 0.337278 8.4:+19364518 MS.gene066095:CDS
TGAAGCAAAACCGTTGTAAC+TGG 0.339352 8.4:-19365232 None:intergenic
CATTGGTTCAACTAGATCAT+AGG 0.344419 8.4:-19363553 None:intergenic
CAAACCACCTGATTTGGTTC+GGG 0.345778 8.4:+19365447 MS.gene066095:CDS
TGATACTGCATTTCCGGTTC+CGG 0.346606 8.4:-19363381 None:intergenic
TCCGAATCTACCACCGTTAA+CGG 0.347466 8.4:+19364106 MS.gene066095:CDS
CCAAACCACCTGATTTGGTT+CGG 0.347773 8.4:+19365446 MS.gene066095:CDS
CTTGACCATCTTTGGGAAGA+AGG 0.353604 8.4:-19362744 None:intergenic
GACTTCCTAGTTTGTCTGAT+AGG 0.354170 8.4:+19365734 MS.gene066095:CDS
TTAGAGTGAAGGTACAATTA+GGG 0.357179 8.4:+19364138 MS.gene066095:CDS
TTCAAACTAGCCGGAGGCAT+TGG 0.363926 8.4:-19365700 None:intergenic
TCCATACCAGCTGGTATCTT+GGG 0.370566 8.4:-19365352 None:intergenic
CGAAGCTATCCGTTACGGTT+CGG 0.376428 8.4:-19364646 None:intergenic
GAACTTCCTTGACCATCTTT+GGG 0.376568 8.4:-19362751 None:intergenic
TTCTTCCCGGAGATATCTTT+CGG 0.376626 8.4:-19363501 None:intergenic
TCTTACTGTGTGGCCAAGTA+TGG 0.380462 8.4:+19364605 MS.gene066095:CDS
AATTCTTCATCTAATTCATC+TGG 0.381375 8.4:-19365406 None:intergenic
CCGCTCTTCTCCGGCGGCGG+TGG 0.382163 8.4:-19363148 None:intergenic
CCAGATTTAATTGTTCCAAC+CGG 0.383775 8.4:+19365283 MS.gene066095:CDS
ATCTTCGTCATCCAATGTTT+AGG 0.384224 8.4:+19365674 MS.gene066095:CDS
CGGCGAGTCATTGGGTTCGT+TGG 0.386763 8.4:-19363694 None:intergenic
TGTGGAGCAAGAGGACTATC+TGG 0.387121 8.4:-19363861 None:intergenic
GCCGAGTAACGCCGCTTCCT+TGG 0.390755 8.4:-19364294 None:intergenic
ATCCATACCAGCTGGTATCT+TGG 0.392091 8.4:-19365353 None:intergenic
CTAATCTCCGGCGCCGTTAA+CGG 0.392366 8.4:-19364119 None:intergenic
GCCAAATGGTTCCCGTTAGA+AGG 0.393717 8.4:+19364374 MS.gene066095:CDS
TTAAAGAACTCAACCCGGTT+TGG 0.395255 8.4:+19362830 MS.gene066095:CDS
TACGTTGGAGATTTCCGTTT+GGG 0.396619 8.4:+19363770 MS.gene066095:CDS
GCGACATACAACTTTCCGTT+TGG 0.398418 8.4:+19363937 MS.gene066095:CDS
TCCACTTGGTGTGGCCCAAC+AGG 0.398673 8.4:+19364994 MS.gene066095:CDS
TTCCATTCCGGCGAGTCATT+GGG 0.402135 8.4:-19363702 None:intergenic
GTAGATTCGGAGTTAGATTC+AGG 0.403572 8.4:-19364094 None:intergenic
CCGGGTTGAGTTCTTTAAAC+CGG 0.406215 8.4:-19362825 None:intergenic
CCGGTTGGAACAATTAAATC+TGG 0.406243 8.4:-19365283 None:intergenic
TTTATCAATCACCGAAGCTT+TGG 0.407372 8.4:+19364039 MS.gene066095:CDS
AGAGCTACAAAATTGTTCAT+TGG 0.408099 8.4:+19365577 MS.gene066095:CDS
TCACCATTACCGTTACCATT+AGG 0.411334 8.4:-19363471 None:intergenic
CCGAACCAAATCAGGTGGTT+TGG 0.414261 8.4:-19365446 None:intergenic
GGGTTCAAGCATTGGTTAGT+TGG 0.416297 8.4:+19365545 MS.gene066095:CDS
GAATTGTGGCAGTGTTAGCT+TGG 0.418307 8.4:+19365161 MS.gene066095:CDS
GGCGAGTCATTGGGTTCGTT+GGG 0.418426 8.4:-19363693 None:intergenic
TTTGCTTCATATACTTTACT+TGG 0.418669 8.4:+19365246 MS.gene066095:CDS
CACCTACGCCTCTGTTTAGA+AGG 0.419906 8.4:+19364419 MS.gene066095:CDS
GCGGTTCGGTTCGCTTGCCC+CGG 0.422998 8.4:+19364908 MS.gene066095:CDS
GGCTCGCTCAGAGCCTCCGA+TGG 0.423198 8.4:+19365060 MS.gene066095:CDS
CCGTAGGTGTATTTGACAAC+TGG 0.423400 8.4:+19364726 MS.gene066095:CDS
AGGTTCTAACCTTCACGAAC+GGG 0.423882 8.4:-19363632 None:intergenic
AAATCCAAGGGTCCAGGAAA+AGG 0.425305 8.4:+19364572 MS.gene066095:CDS
ACCTTCTAACGGGAACCATT+TGG 0.426014 8.4:-19364375 None:intergenic
TAACGAACCCGAACCAAATC+AGG 0.429394 8.4:-19365454 None:intergenic
TCGAAGTCCGCCACCACGTA+AGG 0.430336 8.4:-19362778 None:intergenic
CGCGGTGAAGGAGGACCGTC+AGG 0.430588 8.4:-19363279 None:intergenic
TCAAGCAACTCGTTCCAAAC+CGG 0.432570 8.4:-19362844 None:intergenic
GCCGTTAACGGTGGTAGATT+CGG 0.433227 8.4:-19364107 None:intergenic
GTTTGAAGAGCTTGAAGTTG+AGG 0.433946 8.4:+19362897 MS.gene066095:CDS
CCCCGCGTAAAGCCTCCTGT+TGG 0.434637 8.4:-19365009 None:intergenic
GCGGGAGATGTACGCTCAAC+CGG 0.439542 8.4:+19363362 MS.gene066095:CDS
CCACTGAGCTACCATCTTAG+TGG 0.440567 8.4:-19365035 None:intergenic
GTTAGAATCGTGAAGGTTCG+CGG 0.443339 8.4:+19363588 MS.gene066095:CDS
CTACGTTGGAGATTTCCGTT+TGG 0.447066 8.4:+19363769 MS.gene066095:CDS
TGCCACAATTCTAAACCAAT+TGG 0.447859 8.4:-19365149 None:intergenic
TTCACCGTTAGGTTTCTTCC+CGG 0.449009 8.4:-19363514 None:intergenic
GCAGTGTTAGCTTGGGCTGT+TGG 0.454236 8.4:+19365169 MS.gene066095:CDS
GCTCGCTCAGAGCCTCCGAT+GGG 0.455368 8.4:+19365061 MS.gene066095:CDS
TGGGGCGGTCCTTGTTGAAA+CGG 0.456111 8.4:-19362679 None:intergenic
GATGTACGCTCAACCGGAAC+CGG 0.457522 8.4:+19363368 MS.gene066095:CDS
CAGTCACAGGCATCCGATGA+TGG 0.462725 8.4:+19363203 MS.gene066095:CDS
AAATCAGGTGGTTTGGAGCT+AGG 0.462960 8.4:-19365439 None:intergenic
TCAAACTAGCCGGAGGCATT+GGG 0.463156 8.4:-19365699 None:intergenic
CCCGCGTAAAGCCTCCTGTT+GGG 0.464475 8.4:-19365008 None:intergenic
TCAACAAGATCCACCGTTGC+GGG 0.465205 8.4:+19363344 MS.gene066095:CDS
ACCCAAGATACCAGCTGGTA+TGG 0.466006 8.4:+19365351 MS.gene066095:CDS
TGATAAACCGCACATGTGTC+AGG 0.466189 8.4:-19364938 None:intergenic
GTCCGCCACCACGTAAGGGC+TGG 0.472594 8.4:-19362773 None:intergenic
AGCCAATTGGTTTAGAATTG+TGG 0.473301 8.4:+19365147 MS.gene066095:CDS
GCAAGAACAACCACCGCCGC+CGG 0.473843 8.4:+19363138 MS.gene066095:CDS
CAAAACGCCGGTAGAGTCTC+CGG 0.474134 8.4:+19363915 MS.gene066095:CDS
ATCCTCTCAGATTCACCGTT+AGG 0.477236 8.4:-19363525 None:intergenic
TGAGGAAAAGTAAAGCCAAT+TGG 0.477748 8.4:+19365134 MS.gene066095:CDS
AAGATTATGAAGAGACCTAA+TGG 0.478269 8.4:+19363456 MS.gene066095:CDS
ACGAACGGGCTTTCAGTTGG+AGG 0.481142 8.4:-19363618 None:intergenic
CGGGTTGAGTTCTTTAAACC+GGG 0.481919 8.4:-19362824 None:intergenic
CTGGTATCTTGGGTCTAAAA+CGG 0.482340 8.4:-19365342 None:intergenic
TTTGGAAGAATCACCTTCTC+CGG 0.482881 8.4:+19363311 MS.gene066095:CDS
AATTGTGGCAGTGTTAGCTT+GGG 0.483059 8.4:+19365162 MS.gene066095:CDS
CGCAACCTTCTTCCCAAAGA+TGG 0.483543 8.4:+19362739 MS.gene066095:CDS
ACCAAGGAAGCGGCGTTACT+CGG 0.483659 8.4:+19364293 MS.gene066095:CDS
TTATGACAGGTTAAGAATGT+TGG 0.484006 8.4:+19365474 MS.gene066095:CDS
CTATCTGGAGAATCACGAAT+AGG 0.489424 8.4:-19363846 None:intergenic
CTGGCGTATGTTTGCTGATG+TGG 0.491272 8.4:+19364745 MS.gene066095:CDS
AGTAGGACCCACCTTCTAAC+GGG 0.492134 8.4:-19364385 None:intergenic
ACTCACATGCTTGGAGTATG+AGG 0.492503 8.4:+19365116 MS.gene066095:CDS
CCAAGTTCAAGAATTCCAAC+TGG 0.494458 8.4:-19364518 None:intergenic
GCCCCAAACGGTGAGAAGAT+TGG 0.495143 8.4:+19362696 MS.gene066095:CDS
GTGCCGCTCTTCTCCGGCGG+CGG 0.495670 8.4:-19363151 None:intergenic
TCTTCAAACTCCATATTCTC+CGG 0.496145 8.4:-19362883 None:intergenic
TACAGCAAAACCGATGCAAC+CGG 0.497708 8.4:+19363744 MS.gene066095:CDS
CGAAACGGCTTGAAGAAAAT+GGG 0.497923 8.4:+19364872 MS.gene066095:CDS
TCACCTACAGAGCAATTTCT+CGG 0.498901 8.4:+19363795 MS.gene066095:CDS
CCTGGACCCTTGGATTTCAT+CGG 0.499593 8.4:-19364566 None:intergenic
GGCATTGGGTTCCTAAACAT+TGG 0.499655 8.4:-19365685 None:intergenic
AGACCTAATGGTAACGGTAA+TGG 0.501527 8.4:+19363468 MS.gene066095:CDS
ACCGCCACGTGCCAGCCAAA+TGG 0.504191 8.4:+19364360 MS.gene066095:CDS
TGAGTTCATCGTTTCTGACC+CGG 0.506939 8.4:+19362864 MS.gene066095:CDS
TTCACGAACGGGCTTTCAGT+TGG 0.506939 8.4:-19363621 None:intergenic
GTTAAGAATGTTGGCTGCAA+GGG 0.506997 8.4:+19365483 MS.gene066095:CDS
CGGTTCGGTTCGCTTGCCCC+GGG 0.508247 8.4:+19364909 MS.gene066095:CDS
TTACTGGTTCTGACTCGAAA+CGG 0.508290 8.4:+19364857 MS.gene066095:CDS
GGGCTGTTGGATTAGCTAAG+TGG 0.510508 8.4:+19365182 MS.gene066095:CDS
CTTCGGTGATTGATAAACCT+TGG 0.511460 8.4:-19364033 None:intergenic
GAGTTCTTTAAACCGGGTGG+TGG 0.513084 8.4:-19362818 None:intergenic
ATCTAATTCATCTGGATCAA+CGG 0.513102 8.4:-19365398 None:intergenic
GCCACCGTGCCGCTCTTCTC+CGG 0.514122 8.4:-19363157 None:intergenic
AATCCAAGGGTCCAGGAAAA+GGG 0.514447 8.4:+19364573 MS.gene066095:CDS
AGGTGAGAGGGTTCAAGCAT+TGG 0.514905 8.4:+19365537 MS.gene066095:CDS
AACCCAATGACTCGCCGGAA+TGG 0.515956 8.4:+19363700 MS.gene066095:CDS
GAGTAACGCCGCTTCCTTGG+TGG 0.517547 8.4:-19364291 None:intergenic
AGTTTATCAGGTTGAACAGA+TGG 0.517807 8.4:+19363239 MS.gene066095:CDS
CAGATTTAATTGTTCCAACC+GGG 0.519192 8.4:+19365284 MS.gene066095:CDS
CTCTGTAGGTGAATCCCAAA+CGG 0.519575 8.4:-19363784 None:intergenic
GTTACAGCAAGATGAACATC+AGG 0.521367 8.4:+19363104 MS.gene066095:intron
GTTTAGGAACCCAATGCCTC+CGG 0.524667 8.4:+19365690 MS.gene066095:CDS
TGCTTCTGGAAAAGCGTCGT+CGG 0.525056 8.4:-19363973 None:intergenic
TTCCAGCCCTTACGTGGTGG+CGG 0.525448 8.4:+19362771 MS.gene066095:CDS
TCCTCCTTCACCGCGAGTGG+TGG 0.527371 8.4:+19363287 MS.gene066095:CDS
TGGTTCGGGTTCGTTATGAC+AGG 0.530679 8.4:+19365461 MS.gene066095:CDS
CAACGTAGCACCGGTTGCAT+CGG 0.530953 8.4:-19363754 None:intergenic
TTAGAATCGTGAAGGTTCGC+GGG 0.531801 8.4:+19363589 MS.gene066095:CDS
ACTTGGTGTGGCCCAACAGG+AGG 0.534698 8.4:+19364997 MS.gene066095:CDS
TGATCTGACGTAGTGACTTG+AGG 0.535682 8.4:-19363652 None:intergenic
CAAGCAACTCGTTCCAAACC+GGG 0.536644 8.4:-19362843 None:intergenic
ACTCTCAGATACCAAAGCTT+CGG 0.537168 8.4:-19364050 None:intergenic
TGGATGCTGACTCACATGCT+TGG 0.537691 8.4:+19365107 MS.gene066095:CDS
ATTGGTTCAACTAGATCATA+GGG 0.538697 8.4:-19363552 None:intergenic
TCAACAAGGACCGCCCCAAA+CGG 0.540444 8.4:+19362684 MS.gene066095:CDS
GAAGGAGGACCGTCAGGAAG+TGG 0.540621 8.4:-19363273 None:intergenic
CCGATGAAATCCAAGGGTCC+AGG 0.541851 8.4:+19364566 MS.gene066095:CDS
CCGCCGAGAAATTGCTCTGT+AGG 0.542679 8.4:-19363798 None:intergenic
ACCACAGCATGTCGTTTCAC+TGG 0.543586 8.4:+19364198 MS.gene066095:CDS
GCCTCCTAAAATGGTTGCTG+TGG 0.544475 8.4:+19365636 MS.gene066095:CDS
CTTGGAATCTTAGGCGCTCG+TGG 0.546490 8.4:+19364536 MS.gene066095:CDS
ACGGTGGCGCAGAGCAAGAG+AGG 0.547631 8.4:+19363172 MS.gene066095:CDS
TCTTGTTGAACACGAACTAC+CGG 0.547815 8.4:-19363330 None:intergenic
AGGTTTCCATAGAGATTTCG+CGG 0.548210 8.4:-19364495 None:intergenic
AACGGTGAGAAGATTGGCGG+TGG 0.548470 8.4:+19362702 MS.gene066095:CDS
CTTCCCTCTTCACCCATCAT+CGG 0.549244 8.4:-19363216 None:intergenic
TTCGTTGGGCCTATAACTCG+CGG 0.549831 8.4:-19363679 None:intergenic
TACGCGCCGAAAGATATCTC+CGG 0.550302 8.4:+19363495 MS.gene066095:CDS
GCCCAACAGGAGGCTTTACG+CGG 0.551222 8.4:+19365007 MS.gene066095:CDS
CTTCTAAACAGAGGCGTAGG+TGG 0.551291 8.4:-19364418 None:intergenic
TCTCTATGGAAACCTCCAGT+TGG 0.551296 8.4:+19364503 MS.gene066095:CDS
GGTTAAGAATGTTGGCTGCA+AGG 0.551608 8.4:+19365482 MS.gene066095:CDS
CGAGGTTGTTCGATACATGT+TGG 0.551957 8.4:+19365087 MS.gene066095:CDS
CTTCAAACTCCATATTCTCC+GGG 0.552338 8.4:-19362882 None:intergenic
TTTCGAGTCAGAACCAGTAA+TGG 0.553602 8.4:-19364854 None:intergenic
ATGCACTACATTCGTCCACT+TGG 0.553610 8.4:+19364980 MS.gene066095:CDS
AACGGAAAGTTGTATGTCGC+CGG 0.556257 8.4:-19363934 None:intergenic
CGGTCCTCCTTCACCGCGAG+TGG 0.556306 8.4:+19363284 MS.gene066095:CDS
GCCAATCTTCTCACCGTTTG+GGG 0.556670 8.4:-19362697 None:intergenic
GGTTAGATGATATAAGAAGA+TGG 0.557390 8.4:+19365203 MS.gene066095:CDS
CATCCGATGATGGGTGAAGA+GGG 0.559487 8.4:+19363213 MS.gene066095:CDS
GAGGTTCTAACCTTCACGAA+CGG 0.559610 8.4:-19363633 None:intergenic
CGATGCAACCGGTGCTACGT+TGG 0.560184 8.4:+19363755 MS.gene066095:CDS
AAAACCACCACTCGCGGTGA+AGG 0.560550 8.4:-19363291 None:intergenic
TCCTGTTGGGCCACACCAAG+TGG 0.560701 8.4:-19364995 None:intergenic
ACGCGCCGAAAGATATCTCC+GGG 0.561337 8.4:+19363496 MS.gene066095:CDS
AGATCGCACCACCAAGGAAG+CGG 0.562726 8.4:+19364283 MS.gene066095:CDS
CCACCGCCGCCGGAGAAGAG+CGG 0.562888 8.4:+19363148 MS.gene066095:CDS
GAAGATCTTCTCTTCGTCGC+CGG 0.563391 8.4:+19364224 MS.gene066095:CDS
CGAACAACCTCGTGCCCCAT+CGG 0.563726 8.4:-19365076 None:intergenic
GCATCCGATGATGGGTGAAG+AGG 0.563834 8.4:+19363212 MS.gene066095:CDS
AGAGGAACAATCACAGTCAC+AGG 0.565907 8.4:+19363190 MS.gene066095:CDS
GGTCAGAACCCGAACCGTAA+CGG 0.565952 8.4:+19364637 MS.gene066095:CDS
GAGCGAGTGTGTGCCACGTA+TGG 0.566668 8.4:-19364011 None:intergenic
TTCCATAGAGATTTCGCGGT+GGG 0.569256 8.4:-19364491 None:intergenic
TGTACTGTTCGTTCCACCGT+GGG 0.569348 8.4:-19364670 None:intergenic
TCGTTGGGCCTATAACTCGC+GGG 0.569538 8.4:-19363678 None:intergenic
AGTCACAGGCATCCGATGAT+GGG 0.570113 8.4:+19363204 MS.gene066095:CDS
CCTTGCACTGTCTTAACCGT+AGG 0.571276 8.4:+19364710 MS.gene066095:CDS
TTTAGACCCAAGATACCAGC+TGG 0.572276 8.4:+19365346 MS.gene066095:CDS
CAGTAGGACCCACCTTCTAA+CGG 0.572682 8.4:-19364386 None:intergenic
TCTACCACCGTTAACGGCGC+CGG 0.574432 8.4:+19364112 MS.gene066095:CDS
TCTAACGGGAACCATTTGGC+TGG 0.574894 8.4:-19364371 None:intergenic
AAATGGTTCCCGTTAGAAGG+TGG 0.575886 8.4:+19364377 MS.gene066095:CDS
ATACAACTTTCCGTTTGGAT+CGG 0.577068 8.4:+19363942 MS.gene066095:CDS
AACTGAAAGCCCGTTCGTGA+AGG 0.577259 8.4:+19363623 MS.gene066095:CDS
TTAGAAGGTGGGTCCTACTG+TGG 0.577831 8.4:+19364389 MS.gene066095:CDS
TAAGATGGTAGCTCAGTGGC+TGG 0.577993 8.4:+19365039 MS.gene066095:CDS
TGACTCGCCGGAATGGAACC+AGG 0.578461 8.4:+19363707 MS.gene066095:CDS
CTAACAAACAGATACTGCAT+TGG 0.578943 8.4:-19363570 None:intergenic
TGTACCTTCACTCTAATCTC+CGG 0.580661 8.4:-19364131 None:intergenic
ACCACCACTCGCGGTGAAGG+AGG 0.581513 8.4:-19363288 None:intergenic
CCCAACAGGAGGCTTTACGC+GGG 0.582876 8.4:+19365008 MS.gene066095:CDS
TACGTGGTGGCGGACTTCGA+CGG 0.582930 8.4:+19362781 MS.gene066095:CDS
CAACGAACCCAATGACTCGC+CGG 0.583064 8.4:+19363695 MS.gene066095:CDS
CGGTACCATTGTGGAGCAAG+AGG 0.584297 8.4:-19363870 None:intergenic
AATGGGTGAAATCGAGTTAG+CGG 0.585887 8.4:+19364889 MS.gene066095:CDS
CGCTGTTCGATTGACGTCAG+AGG 0.586187 8.4:-19364329 None:intergenic
CGAAGTCCGCCACCACGTAA+GGG 0.586229 8.4:-19362777 None:intergenic
TATGTCGCCGGAGACTCTAC+CGG 0.586518 8.4:-19363922 None:intergenic
AATCTTGTATCCATACCAGC+TGG 0.589612 8.4:-19365361 None:intergenic
TCTGTTTGTTAGAATCGTGA+AGG 0.590343 8.4:+19363581 MS.gene066095:CDS
CGTGGCACACACTCGCTCCA+AGG 0.590638 8.4:+19364016 MS.gene066095:CDS
TGAACACGAACTACCGGAGA+AGG 0.591102 8.4:-19363324 None:intergenic
CAATCACAGAGAACAAGAAG+AGG 0.591111 8.4:+19364164 MS.gene066095:CDS
AATCTTCTCACCGTTTGGGG+CGG 0.592507 8.4:-19362694 None:intergenic
AGAGCCTCCGATGGGGCACG+AGG 0.594720 8.4:+19365069 MS.gene066095:CDS
CTACATTCGTCCACTTGGTG+TGG 0.594829 8.4:+19364985 MS.gene066095:CDS
CCGGTTTAAAGAACTCAACC+CGG 0.594943 8.4:+19362825 MS.gene066095:CDS
GGAAATCTCCAACGTAGCAC+CGG 0.596844 8.4:-19363763 None:intergenic
GGAATCTTCTAGTGGCTCAC+CGG 0.597195 8.4:-19364243 None:intergenic
CTCGCTCAGAGCCTCCGATG+GGG 0.597618 8.4:+19365062 MS.gene066095:CDS
TTATCACGTGCTTGATGAAG+CGG 0.601621 8.4:+19364445 MS.gene066095:CDS
TTCAACAAGATCCACCGTTG+CGG 0.602303 8.4:+19363343 MS.gene066095:CDS
ATCAACCTATCAGACAAACT+AGG 0.603071 8.4:-19365739 None:intergenic
ATCTTCTACGAGAAGGACCA+TGG 0.603592 8.4:-19364264 None:intergenic
TAGAAGGTGGGTCCTACTGT+GGG 0.603855 8.4:+19364390 MS.gene066095:CDS
CCACAATGGTACCGTCTCGA+AGG 0.605104 8.4:+19363879 MS.gene066095:CDS
GTGAAATCGAGTTAGCGGTT+CGG 0.605145 8.4:+19364894 MS.gene066095:CDS
ATGAAGAGACCTAATGGTAA+CGG 0.606071 8.4:+19363462 MS.gene066095:CDS
ACGCGGGGCAGCCACTAAGA+TGG 0.606291 8.4:+19365024 MS.gene066095:CDS
ACAACCTCGTGCCCCATCGG+AGG 0.608544 8.4:-19365073 None:intergenic
AATGGTTCCCGTTAGAAGGT+GGG 0.608687 8.4:+19364378 MS.gene066095:CDS
AGTTCAAGAATTCCAACTGG+AGG 0.611937 8.4:-19364515 None:intergenic
CCAAACGGTGAGAAGATTGG+CGG 0.612320 8.4:+19362699 MS.gene066095:CDS
TGGGTCGAAGCTATCCGTTA+CGG 0.615070 8.4:-19364651 None:intergenic
ACCATTTGGCTGGCACGTGG+CGG 0.615125 8.4:-19364361 None:intergenic
CCTTCGAGACGGTACCATTG+TGG 0.615235 8.4:-19363879 None:intergenic
CTACGCCTCTGTTTAGAAGG+TGG 0.615741 8.4:+19364422 MS.gene066095:CDS
GGCCACACAGTAAGAATCAG+TGG 0.616175 8.4:-19364597 None:intergenic
TGAGCCACTAGAAGATTCCA+TGG 0.617345 8.4:+19364247 MS.gene066095:CDS
AGAGAAAACGAACCACCACC+CGG 0.617915 8.4:+19362806 MS.gene066095:CDS
CTGCTGCGCCACCTTCGAGA+CGG 0.618995 8.4:-19363890 None:intergenic
CAATGGTACCGTCTCGAAGG+TGG 0.621124 8.4:+19363882 MS.gene066095:CDS
TGGTGCGATCTTCTACGAGA+AGG 0.622059 8.4:-19364271 None:intergenic
GAACGAACAGTACACATGGC+AGG 0.622431 8.4:+19364679 MS.gene066095:CDS
CTTCTTCCCAAAGATGGTCA+AGG 0.623665 8.4:+19362745 MS.gene066095:CDS
AGGAAGTTCCAGCCCTTACG+TGG 0.623834 8.4:+19362765 MS.gene066095:CDS
TAACGGATAGCTTCGACCCA+CGG 0.625339 8.4:+19364654 MS.gene066095:CDS
CATTGTGTGCCACTTCCTGA+CGG 0.625959 8.4:+19363264 MS.gene066095:CDS
TCTTCTTCCGATGAAATCCA+AGG 0.627021 8.4:+19364559 MS.gene066095:CDS
CTTCTTCCGATGAAATCCAA+GGG 0.628802 8.4:+19364560 MS.gene066095:CDS
GGAACCATTTGGCTGGCACG+TGG 0.629535 8.4:-19364364 None:intergenic
TGAGCGTACATCTCCCGCAA+CGG 0.631429 8.4:-19363357 None:intergenic
GGCGCCGGAGATTAGAGTGA+AGG 0.631671 8.4:+19364127 MS.gene066095:CDS
GTATCTGAGAGTAACAGTCA+TGG 0.631794 8.4:+19364061 MS.gene066095:CDS
TAGGTGGACTCTCCCACAGT+AGG 0.634184 8.4:-19364402 None:intergenic
GTTGAGTTCTTTAAACCGGG+TGG 0.635261 8.4:-19362821 None:intergenic
CCAGTTGTCAAATACACCTA+CGG 0.635674 8.4:-19364726 None:intergenic
CCTACGGTTAAGACAGTGCA+AGG 0.636191 8.4:-19364710 None:intergenic
ATCTCCGGCGCCGTTAACGG+TGG 0.640916 8.4:-19364116 None:intergenic
ATCATCATCATCCTGACGTG+AGG 0.641393 8.4:+19363403 MS.gene066095:CDS
TCTTCCAAAACCACCACTCG+CGG 0.641790 8.4:-19363297 None:intergenic
GCCAGTGAAACGACATGCTG+TGG 0.643248 8.4:-19364199 None:intergenic
AACCTAACGGTGAATCTGAG+AGG 0.643417 8.4:+19363523 MS.gene066095:CDS
GCGTACATCTCCCGCAACGG+TGG 0.645515 8.4:-19363354 None:intergenic
CCAACAGGAGGCTTTACGCG+GGG 0.647836 8.4:+19365009 MS.gene066095:CDS
GCAACGACGCCGTTTCAACA+AGG 0.650190 8.4:+19362670 MS.gene066095:CDS
GTGTACTGTTCGTTCCACCG+TGG 0.657085 8.4:-19364671 None:intergenic
AAGTTCCAGCCCTTACGTGG+TGG 0.659152 8.4:+19362768 MS.gene066095:CDS
AGTGAAACGACATGCTGTGG+TGG 0.659402 8.4:-19364196 None:intergenic
GAGTTCAGATGCACCATACG+TGG 0.662296 8.4:+19363998 MS.gene066095:CDS
ATAGTCCTCTTGCTCCACAA+TGG 0.663046 8.4:+19363865 MS.gene066095:CDS
AGGACCATGGAATCTTCTAG+TGG 0.663292 8.4:-19364251 None:intergenic
ATCTCCGGGAAGAAACCTAA+CGG 0.664237 8.4:+19363510 MS.gene066095:CDS
GTCCACTGATTCTTACTGTG+TGG 0.665645 8.4:+19364595 MS.gene066095:CDS
CACCTTCTAAACAGAGGCGT+AGG 0.667135 8.4:-19364421 None:intergenic
GCCGGAGAAGAGCGGCACGG+TGG 0.669044 8.4:+19363156 MS.gene066095:CDS
CGTAGAAGATCGCACCACCA+AGG 0.672290 8.4:+19364277 MS.gene066095:CDS
ACCGTGCCGCTCTTCTCCGG+CGG 0.675158 8.4:-19363154 None:intergenic
CGGATAGCTTCGACCCACGG+TGG 0.684725 8.4:+19364657 MS.gene066095:CDS
TGAGGAAAATGCAAACAATG+AGG 0.684870 8.4:+19363421 MS.gene066095:CDS
GCCGCCGGAGAAGAGCGGCA+CGG 0.686889 8.4:+19363153 MS.gene066095:CDS
GGCGCAGCAGAACAAAACGC+CGG 0.688834 8.4:+19363903 MS.gene066095:CDS
GGATTGAGTTCCGATCCAAA+CGG 0.689297 8.4:-19363952 None:intergenic
CGAACCCGAACCAAATCAGG+TGG 0.692684 8.4:-19365451 None:intergenic
CCACTAAGATGGTAGCTCAG+TGG 0.696907 8.4:+19365035 MS.gene066095:CDS
TTAAATCTGGATACCAAACA+AGG 0.703911 8.4:-19365270 None:intergenic
GGTGGAACGAACAGTACACA+TGG 0.706630 8.4:+19364675 MS.gene066095:CDS
CCTACAGAGCAATTTCTCGG+CGG 0.742223 8.4:+19363798 MS.gene066095:CDS
GATAACCACCTTCTAAACAG+AGG 0.746597 8.4:-19364427 None:intergenic
ACGTCAGAGGAATGACGACG+TGG 0.747345 8.4:-19364316 None:intergenic
TTTCCATAGAGATTTCGCGG+TGG 0.768966 8.4:-19364492 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTATAATGATAAGAAATTT+GGG + chr8.4:19362920-19362939 MS.gene066095:intron 10.0%
!! GTTTATAATGATAAGAAATT+TGG + chr8.4:19362919-19362938 MS.gene066095:intron 15.0%
!!! TTTTTATATGTTGTTTTGAT+TGG + chr8.4:19365307-19365326 MS.gene066095:CDS 15.0%
! AATGATAAGAAATTTGGGAA+TGG + chr8.4:19362925-19362944 MS.gene066095:intron 25.0%
! AATTCTTCATCTAATTCATC+TGG - chr8.4:19365409-19365428 None:intergenic 25.0%
! CAAAACAACATATAAAAACC+CGG - chr8.4:19365305-19365324 None:intergenic 25.0%
! TTTGCTTCATATACTTTACT+TGG + chr8.4:19365246-19365265 MS.gene066095:CDS 25.0%
!! GTATACGAATTTTACCTATA+CGG - chr8.4:19364790-19364809 None:intergenic 25.0%
!!! ATGTTGTTTTGATTGGAATA+TGG + chr8.4:19365314-19365333 MS.gene066095:CDS 25.0%
AAGATTATGAAGAGACCTAA+TGG + chr8.4:19363456-19363475 MS.gene066095:CDS 30.0%
AGAGCTACAAAATTGTTCAT+TGG + chr8.4:19365577-19365596 MS.gene066095:CDS 30.0%
ATCTAATTCATCTGGATCAA+CGG - chr8.4:19365401-19365420 None:intergenic 30.0%
ATGGAAAAATCCAGTTACAA+CGG + chr8.4:19365222-19365241 MS.gene066095:CDS 30.0%
ATTCTTGAACTTGGAATCTT+AGG + chr8.4:19364527-19364546 MS.gene066095:CDS 30.0%
GGTTAGATGATATAAGAAGA+TGG + chr8.4:19365203-19365222 MS.gene066095:CDS 30.0%
TTAAATCTGGATACCAAACA+AGG - chr8.4:19365273-19365292 None:intergenic 30.0%
TTATGACAGGTTAAGAATGT+TGG + chr8.4:19365474-19365493 MS.gene066095:CDS 30.0%
! ATGAACAATTTTGTAGCTCT+TGG - chr8.4:19365577-19365596 None:intergenic 30.0%
! ATTAGAGTGAAGGTACAATT+AGG + chr8.4:19364137-19364156 MS.gene066095:CDS 30.0%
! ATTGGTTCAACTAGATCATA+GGG - chr8.4:19363555-19363574 None:intergenic 30.0%
! CAAGAATCATTTTCTTGGTA+GGG + chr8.4:19362957-19362976 MS.gene066095:intron 30.0%
! TGAACAATTTTGTAGCTCTT+GGG - chr8.4:19365576-19365595 None:intergenic 30.0%
! TTAGAGTGAAGGTACAATTA+GGG + chr8.4:19364138-19364157 MS.gene066095:CDS 30.0%
!! TAGTGCATTTTTGGAAGTAA+TGG - chr8.4:19364968-19364987 None:intergenic 30.0%
AAGAAATTTGGGAATGGTAG+TGG + chr8.4:19362931-19362950 MS.gene066095:intron 35.0%
ACAACATATAAAAACCCGGT+TGG - chr8.4:19365301-19365320 None:intergenic 35.0%
ATACAACTTTCCGTTTGGAT+CGG + chr8.4:19363942-19363961 MS.gene066095:CDS 35.0%
ATCAACCTATCAGACAAACT+AGG - chr8.4:19365742-19365761 None:intergenic 35.0%
ATCTTCGTCATCCAATGTTT+AGG + chr8.4:19365674-19365693 MS.gene066095:CDS 35.0%
ATGAAGAGACCTAATGGTAA+CGG + chr8.4:19363462-19363481 MS.gene066095:CDS 35.0%
CACAAGTTCATATCCATTAC+TGG + chr8.4:19364841-19364860 MS.gene066095:CDS 35.0%
CAGATTTAATTGTTCCAACC+GGG + chr8.4:19365284-19365303 MS.gene066095:CDS 35.0%
CCAGATTTAATTGTTCCAAC+CGG + chr8.4:19365283-19365302 MS.gene066095:CDS 35.0%
CTAACAAACAGATACTGCAT+TGG - chr8.4:19363573-19363592 None:intergenic 35.0%
CTGAAAAAGTTCAAACTAGC+CGG - chr8.4:19365712-19365731 None:intergenic 35.0%
TACTTTACTTGGTCCTTGTT+TGG + chr8.4:19365257-19365276 MS.gene066095:CDS 35.0%
TCTTCAAACTCCATATTCTC+CGG - chr8.4:19362886-19362905 None:intergenic 35.0%
TGAGGAAAAGTAAAGCCAAT+TGG + chr8.4:19365134-19365153 MS.gene066095:CDS 35.0%
TGAGGAAAATGCAAACAATG+AGG + chr8.4:19363421-19363440 MS.gene066095:CDS 35.0%
TGCCACAATTCTAAACCAAT+TGG - chr8.4:19365152-19365171 None:intergenic 35.0%
TTTATCAATCACCGAAGCTT+TGG + chr8.4:19364039-19364058 MS.gene066095:CDS 35.0%
! AAGTGTTTCAGTTGGATTAG+AGG + chr8.4:19363049-19363068 MS.gene066095:intron 35.0%
! AGCCAATTGGTTTAGAATTG+TGG + chr8.4:19365147-19365166 MS.gene066095:CDS 35.0%
! ATTTTACCTATACGGCAATC+TGG - chr8.4:19364782-19364801 None:intergenic 35.0%
! GCAAGAATCATTTTCTTGGT+AGG + chr8.4:19362956-19362975 MS.gene066095:intron 35.0%
! TCTGTTTGTTAGAATCGTGA+AGG + chr8.4:19363581-19363600 MS.gene066095:CDS 35.0%
! TGATGATGATACTGCATTTC+CGG - chr8.4:19363390-19363409 None:intergenic 35.0%
!! AGAGAAGAAAGTGTTTCAGT+TGG + chr8.4:19363041-19363060 MS.gene066095:intron 35.0%
!! AGTTTATCAGGTTGAACAGA+TGG + chr8.4:19363239-19363258 MS.gene066095:CDS 35.0%
!! CATTGGTTCAACTAGATCAT+AGG - chr8.4:19363556-19363575 None:intergenic 35.0%
AAAAAGTTCAAACTAGCCGG+AGG - chr8.4:19365709-19365728 None:intergenic 40.0%
AAAATGGTTGCTGTGGCTTT+AGG + chr8.4:19365643-19365662 MS.gene066095:CDS 40.0%
AATCTTGTATCCATACCAGC+TGG - chr8.4:19365364-19365383 None:intergenic 40.0%
AATGGGTGAAATCGAGTTAG+CGG + chr8.4:19364889-19364908 MS.gene066095:CDS 40.0%
ACATGTGTCAGGAAAAAACC+CGG - chr8.4:19364930-19364949 None:intergenic 40.0%
ACTCTCAGATACCAAAGCTT+CGG - chr8.4:19364053-19364072 None:intergenic 40.0%
AGGTTTCCATAGAGATTTCG+CGG - chr8.4:19364498-19364517 None:intergenic 40.0%
AGTTCAAGAATTCCAACTGG+AGG - chr8.4:19364518-19364537 None:intergenic 40.0%
CAATCACAGAGAACAAGAAG+AGG + chr8.4:19364164-19364183 MS.gene066095:CDS 40.0%
CCAAGTTCAAGAATTCCAAC+TGG - chr8.4:19364521-19364540 None:intergenic 40.0%
CCAGTTGGAATTCTTGAACT+TGG + chr8.4:19364518-19364537 MS.gene066095:CDS 40.0%
CCAGTTGTCAAATACACCTA+CGG - chr8.4:19364729-19364748 None:intergenic 40.0%
CCGGTTGGAACAATTAAATC+TGG - chr8.4:19365286-19365305 None:intergenic 40.0%
CGAAACGGCTTGAAGAAAAT+GGG + chr8.4:19364872-19364891 MS.gene066095:CDS 40.0%
CTATCTGGAGAATCACGAAT+AGG - chr8.4:19363849-19363868 None:intergenic 40.0%
CTATTCAGTGCCTCCTAAAA+TGG + chr8.4:19365627-19365646 MS.gene066095:CDS 40.0%
CTGGTATCTTGGGTCTAAAA+CGG - chr8.4:19365345-19365364 None:intergenic 40.0%
CTTCAAACTCCATATTCTCC+GGG - chr8.4:19362885-19362904 None:intergenic 40.0%
CTTCGGTGATTGATAAACCT+TGG - chr8.4:19364036-19364055 None:intergenic 40.0%
CTTCTTCCGATGAAATCCAA+GGG + chr8.4:19364560-19364579 MS.gene066095:CDS 40.0%
CTTGGTAGGGTTAAGCTTTA+TGG + chr8.4:19362970-19362989 MS.gene066095:intron 40.0%
GAAAAACCAGATTGCCGTAT+AGG + chr8.4:19364773-19364792 MS.gene066095:CDS 40.0%
GAACTTCCTTGACCATCTTT+GGG - chr8.4:19362754-19362773 None:intergenic 40.0%
GATAACCACCTTCTAAACAG+AGG - chr8.4:19364430-19364449 None:intergenic 40.0%
GGCCAAGTATGGCAAAAAAT+GGG + chr8.4:19364616-19364635 MS.gene066095:CDS 40.0%
GTAGATTCGGAGTTAGATTC+AGG - chr8.4:19364097-19364116 None:intergenic 40.0%
GTATCTGAGAGTAACAGTCA+TGG + chr8.4:19364061-19364080 MS.gene066095:CDS 40.0%
GTTACAGCAAGATGAACATC+AGG + chr8.4:19363104-19363123 MS.gene066095:intron 40.0%
GTTTGAAGAGCTTGAAGTTG+AGG + chr8.4:19362897-19362916 MS.gene066095:CDS 40.0%
TACGTTGGAGATTTCCGTTT+GGG + chr8.4:19363770-19363789 MS.gene066095:CDS 40.0%
TCACCATTACCGTTACCATT+AGG - chr8.4:19363474-19363493 None:intergenic 40.0%
TCACCTACAGAGCAATTTCT+CGG + chr8.4:19363795-19363814 MS.gene066095:CDS 40.0%
TCGAAACGGCTTGAAGAAAA+TGG + chr8.4:19364871-19364890 MS.gene066095:CDS 40.0%
TCTTCTTCCGATGAAATCCA+AGG + chr8.4:19364559-19364578 MS.gene066095:CDS 40.0%
TCTTGTTGAACACGAACTAC+CGG - chr8.4:19363333-19363352 None:intergenic 40.0%
TGAAGAGGGAAGAGTTTATC+AGG + chr8.4:19363227-19363246 MS.gene066095:CDS 40.0%
TGAAGCAAAACCGTTGTAAC+TGG - chr8.4:19365235-19365254 None:intergenic 40.0%
TGGCCAAGTATGGCAAAAAA+TGG + chr8.4:19364615-19364634 MS.gene066095:CDS 40.0%
TGTACCTTCACTCTAATCTC+CGG - chr8.4:19364134-19364153 None:intergenic 40.0%
TTAAAGAACTCAACCCGGTT+TGG + chr8.4:19362830-19362849 MS.gene066095:CDS 40.0%
TTATCACGTGCTTGATGAAG+CGG + chr8.4:19364445-19364464 MS.gene066095:CDS 40.0%
TTCTTCCCGGAGATATCTTT+CGG - chr8.4:19363504-19363523 None:intergenic 40.0%
TTGTAGAGGTGAAGAAGCTT+TGG + chr8.4:19363005-19363024 MS.gene066095:intron 40.0%
TTTGGAAGAATCACCTTCTC+CGG + chr8.4:19363311-19363330 MS.gene066095:CDS 40.0%
! AAAGCCACAGCAACCATTTT+AGG - chr8.4:19365643-19365662 None:intergenic 40.0%
! AATTGTGGCAGTGTTAGCTT+GGG + chr8.4:19365162-19365181 MS.gene066095:CDS 40.0%
! ATTTTGCAACACAAGGTGAG+AGG + chr8.4:19365524-19365543 MS.gene066095:CDS 40.0%
! CAGTTGGATTAGAGGTGAAT+CGG + chr8.4:19363057-19363076 MS.gene066095:intron 40.0%
! GACTTCCTAGTTTGTCTGAT+AGG + chr8.4:19365734-19365753 MS.gene066095:CDS 40.0%
! GGAACACAGTTTTCTTGTAG+AGG + chr8.4:19362991-19363010 MS.gene066095:intron 40.0%
! GGACGAATGTAGTGCATTTT+TGG - chr8.4:19364977-19364996 None:intergenic 40.0%
! GGTCGCAAGAATCATTTTCT+TGG + chr8.4:19362952-19362971 MS.gene066095:intron 40.0%
! GTTAAGAATGTTGGCTGCAA+GGG + chr8.4:19365483-19365502 MS.gene066095:CDS 40.0%
! TTGGGTGATTTTGCAACACA+AGG + chr8.4:19365517-19365536 MS.gene066095:CDS 40.0%
! TTTCGAGTCAGAACCAGTAA+TGG - chr8.4:19364857-19364876 None:intergenic 40.0%
! TTTTGCAACACAAGGTGAGA+GGG + chr8.4:19365525-19365544 MS.gene066095:CDS 40.0%
!! AGACCTAATGGTAACGGTAA+TGG + chr8.4:19363468-19363487 MS.gene066095:CDS 40.0%
!! ATCGGTTTTGCTGTAACCAA+GGG - chr8.4:19363739-19363758 None:intergenic 40.0%
!! TTACTGGTTCTGACTCGAAA+CGG + chr8.4:19364857-19364876 MS.gene066095:CDS 40.0%
!!! GACCCATTTTTTGCCATACT+TGG - chr8.4:19364621-19364640 None:intergenic 40.0%
!!! GTTTTTTCCTGACACATGTG+CGG + chr8.4:19364931-19364950 MS.gene066095:CDS 40.0%
AAATCCAAGGGTCCAGGAAA+AGG + chr8.4:19364572-19364591 MS.gene066095:CDS 45.0%
AAATGGTTCCCGTTAGAAGG+TGG + chr8.4:19364377-19364396 MS.gene066095:CDS 45.0%
AACCTAACGGTGAATCTGAG+AGG + chr8.4:19363523-19363542 MS.gene066095:CDS 45.0%
AACGGAAAGTTGTATGTCGC+CGG - chr8.4:19363937-19363956 None:intergenic 45.0%
AATCCAAGGGTCCAGGAAAA+GGG + chr8.4:19364573-19364592 MS.gene066095:CDS 45.0%
AATGGTTCCCGTTAGAAGGT+GGG + chr8.4:19364378-19364397 MS.gene066095:CDS 45.0%
ACCTTCTAACGGGAACCATT+TGG - chr8.4:19364378-19364397 None:intergenic 45.0%
ACTCACATGCTTGGAGTATG+AGG + chr8.4:19365116-19365135 MS.gene066095:CDS 45.0%
AGAGGAACAATCACAGTCAC+AGG + chr8.4:19363190-19363209 MS.gene066095:CDS 45.0%
AGGACCATGGAATCTTCTAG+TGG - chr8.4:19364254-19364273 None:intergenic 45.0%
ATAGTCCTCTTGCTCCACAA+TGG + chr8.4:19363865-19363884 MS.gene066095:CDS 45.0%
ATCATCATCATCCTGACGTG+AGG + chr8.4:19363403-19363422 MS.gene066095:CDS 45.0%
ATCCATACCAGCTGGTATCT+TGG - chr8.4:19365356-19365375 None:intergenic 45.0%
ATCCTCTCAGATTCACCGTT+AGG - chr8.4:19363528-19363547 None:intergenic 45.0%
ATCTCCGGGAAGAAACCTAA+CGG + chr8.4:19363510-19363529 MS.gene066095:CDS 45.0%
ATCTTCTACGAGAAGGACCA+TGG - chr8.4:19364267-19364286 None:intergenic 45.0%
ATGCACTACATTCGTCCACT+TGG + chr8.4:19364980-19364999 MS.gene066095:CDS 45.0%
ATGTGTCAGGAAAAAACCCG+GGG - chr8.4:19364928-19364947 None:intergenic 45.0%
CATGTGTCAGGAAAAAACCC+GGG - chr8.4:19364929-19364948 None:intergenic 45.0%
CCGGTTTAAAGAACTCAACC+CGG + chr8.4:19362825-19362844 MS.gene066095:CDS 45.0%
CCGTAGGTGTATTTGACAAC+TGG + chr8.4:19364726-19364745 MS.gene066095:CDS 45.0%
CGAGGTTGTTCGATACATGT+TGG + chr8.4:19365087-19365106 MS.gene066095:CDS 45.0%
CTACGTTGGAGATTTCCGTT+TGG + chr8.4:19363769-19363788 MS.gene066095:CDS 45.0%
CTCTGTAGGTGAATCCCAAA+CGG - chr8.4:19363787-19363806 None:intergenic 45.0%
CTTCTTCCCAAAGATGGTCA+AGG + chr8.4:19362745-19362764 MS.gene066095:CDS 45.0%
GAATTGTGGCAGTGTTAGCT+TGG + chr8.4:19365161-19365180 MS.gene066095:CDS 45.0%
GCAAAAACCTGGTTCCATTC+CGG - chr8.4:19363717-19363736 None:intergenic 45.0%
GCGACATACAACTTTCCGTT+TGG + chr8.4:19363937-19363956 MS.gene066095:CDS 45.0%
GGAACTTCCTTGACCATCTT+TGG - chr8.4:19362755-19362774 None:intergenic 45.0%
GGATTGAGTTCCGATCCAAA+CGG - chr8.4:19363955-19363974 None:intergenic 45.0%
GTGAAATCGAGTTAGCGGTT+CGG + chr8.4:19364894-19364913 MS.gene066095:CDS 45.0%
GTTAGAATCGTGAAGGTTCG+CGG + chr8.4:19363588-19363607 MS.gene066095:CDS 45.0%
GTTGAGTTCTTTAAACCGGG+TGG - chr8.4:19362824-19362843 None:intergenic 45.0%
TAACGAACCCGAACCAAATC+AGG - chr8.4:19365457-19365476 None:intergenic 45.0%
TACAGCAAAACCGATGCAAC+CGG + chr8.4:19363744-19363763 MS.gene066095:CDS 45.0%
TAGCTCCAAACCACCTGATT+TGG + chr8.4:19365441-19365460 MS.gene066095:CDS 45.0%
TCAAGCAACTCGTTCCAAAC+CGG - chr8.4:19362847-19362866 None:intergenic 45.0%
TCCATACCAGCTGGTATCTT+GGG - chr8.4:19365355-19365374 None:intergenic 45.0%
TCCGAATCTACCACCGTTAA+CGG + chr8.4:19364106-19364125 MS.gene066095:CDS 45.0%
TCTCTATGGAAACCTCCAGT+TGG + chr8.4:19364503-19364522 MS.gene066095:CDS 45.0%
TCTTACTGTGTGGCCAAGTA+TGG + chr8.4:19364605-19364624 MS.gene066095:CDS 45.0%
TGAGCCACTAGAAGATTCCA+TGG + chr8.4:19364247-19364266 MS.gene066095:CDS 45.0%
TGAGTTCATCGTTTCTGACC+CGG + chr8.4:19362864-19362883 MS.gene066095:CDS 45.0%
TGATAAACCGCACATGTGTC+AGG - chr8.4:19364941-19364960 None:intergenic 45.0%
TGATACTGCATTTCCGGTTC+CGG - chr8.4:19363384-19363403 None:intergenic 45.0%
TGATCTGACGTAGTGACTTG+AGG - chr8.4:19363655-19363674 None:intergenic 45.0%
TGTAACCAAGGGCAAAAACC+TGG - chr8.4:19363728-19363747 None:intergenic 45.0%
TTAGAATCGTGAAGGTTCGC+GGG + chr8.4:19363589-19363608 MS.gene066095:CDS 45.0%
TTCAACAAGATCCACCGTTG+CGG + chr8.4:19363343-19363362 MS.gene066095:CDS 45.0%
TTCACCGTTAGGTTTCTTCC+CGG - chr8.4:19363517-19363536 None:intergenic 45.0%
TTCCATAGAGATTTCGCGGT+GGG - chr8.4:19364494-19364513 None:intergenic 45.0%
TTTAGACCCAAGATACCAGC+TGG + chr8.4:19365346-19365365 MS.gene066095:CDS 45.0%
TTTCCATAGAGATTTCGCGG+TGG - chr8.4:19364495-19364514 None:intergenic 45.0%
! AAATCAGGTGGTTTGGAGCT+AGG - chr8.4:19365442-19365461 None:intergenic 45.0%
! AGGTTCTAACCTTCACGAAC+GGG - chr8.4:19363635-19363654 None:intergenic 45.0%
! CCGGGTTGAGTTCTTTAAAC+CGG - chr8.4:19362828-19362847 None:intergenic 45.0%
! CGGGTTGAGTTCTTTAAACC+GGG - chr8.4:19362827-19362846 None:intergenic 45.0%
! CTTGACCATCTTTGGGAAGA+AGG - chr8.4:19362747-19362766 None:intergenic 45.0%
! GAGGTTCTAACCTTCACGAA+CGG - chr8.4:19363636-19363655 None:intergenic 45.0%
! GGCATTGGGTTCCTAAACAT+TGG - chr8.4:19365688-19365707 None:intergenic 45.0%
! GGTTAAGAATGTTGGCTGCA+AGG + chr8.4:19365482-19365501 MS.gene066095:CDS 45.0%
! GTTTGCATTTTCCTCACGTC+AGG - chr8.4:19363417-19363436 None:intergenic 45.0%
!! CAAACCACCTGATTTGGTTC+GGG + chr8.4:19365447-19365466 MS.gene066095:CDS 45.0%
!! CCAAACCACCTGATTTGGTT+CGG + chr8.4:19365446-19365465 MS.gene066095:CDS 45.0%
!! GCAAGGGTGCAAACTGTTTT+GGG + chr8.4:19365499-19365518 MS.gene066095:CDS 45.0%
!! GGGTTCAAGCATTGGTTAGT+TGG + chr8.4:19365545-19365564 MS.gene066095:CDS 45.0%
!! GTCCACTGATTCTTACTGTG+TGG + chr8.4:19364595-19364614 MS.gene066095:CDS 45.0%
!! TGCAAGGGTGCAAACTGTTT+TGG + chr8.4:19365498-19365517 MS.gene066095:CDS 45.0%
!!! CATCGGTTTTGCTGTAACCA+AGG - chr8.4:19363740-19363759 None:intergenic 45.0%
AACTGAAAGCCCGTTCGTGA+AGG + chr8.4:19363623-19363642 MS.gene066095:CDS 50.0%
AATCTTCTCACCGTTTGGGG+CGG - chr8.4:19362697-19362716 None:intergenic 50.0%
ACCCAAGATACCAGCTGGTA+TGG + chr8.4:19365351-19365370 MS.gene066095:CDS 50.0%
AGAGAAAACGAACCACCACC+CGG + chr8.4:19362806-19362825 MS.gene066095:CDS 50.0%
AGGTGAGAGGGTTCAAGCAT+TGG + chr8.4:19365537-19365556 MS.gene066095:CDS 50.0%
AGTAGGACCCACCTTCTAAC+GGG - chr8.4:19364388-19364407 None:intergenic 50.0%
AGTCACAGGCATCCGATGAT+GGG + chr8.4:19363204-19363223 MS.gene066095:CDS 50.0%
AGTGAAACGACATGCTGTGG+TGG - chr8.4:19364199-19364218 None:intergenic 50.0%
CAAGCAACTCGTTCCAAACC+GGG - chr8.4:19362846-19362865 None:intergenic 50.0%
CACCTACGCCTCTGTTTAGA+AGG + chr8.4:19364419-19364438 MS.gene066095:CDS 50.0%
CAGTAGGACCCACCTTCTAA+CGG - chr8.4:19364389-19364408 None:intergenic 50.0%
CCAAACGGTGAGAAGATTGG+CGG + chr8.4:19362699-19362718 MS.gene066095:CDS 50.0%
CCACTAAGATGGTAGCTCAG+TGG + chr8.4:19365035-19365054 MS.gene066095:CDS 50.0%
CCACTGAGCTACCATCTTAG+TGG - chr8.4:19365038-19365057 None:intergenic 50.0%
CCGAACCAAATCAGGTGGTT+TGG - chr8.4:19365449-19365468 None:intergenic 50.0%
CCTACAGAGCAATTTCTCGG+CGG + chr8.4:19363798-19363817 MS.gene066095:CDS 50.0%
CCTACGGTTAAGACAGTGCA+AGG - chr8.4:19364713-19364732 None:intergenic 50.0%
CCTGGACCCTTGGATTTCAT+CGG - chr8.4:19364569-19364588 None:intergenic 50.0%
CCTTGCACTGTCTTAACCGT+AGG + chr8.4:19364710-19364729 MS.gene066095:CDS 50.0%
CGAAGCTATCCGTTACGGTT+CGG - chr8.4:19364649-19364668 None:intergenic 50.0%
CGCAACCTTCTTCCCAAAGA+TGG + chr8.4:19362739-19362758 MS.gene066095:CDS 50.0%
CGCCAATCTTCTCACCGTTT+GGG - chr8.4:19362701-19362720 None:intergenic 50.0%
CGTTTCTGACCCGGAGAATA+TGG + chr8.4:19362873-19362892 MS.gene066095:CDS 50.0%
CTACGCCTCTGTTTAGAAGG+TGG + chr8.4:19364422-19364441 MS.gene066095:CDS 50.0%
CTTCCCTCTTCACCCATCAT+CGG - chr8.4:19363219-19363238 None:intergenic 50.0%
GAACGAACAGTACACATGGC+AGG + chr8.4:19364679-19364698 MS.gene066095:CDS 50.0%
GAAGATCTTCTCTTCGTCGC+CGG + chr8.4:19364224-19364243 MS.gene066095:CDS 50.0%
GAAGCTATCCGTTACGGTTC+GGG - chr8.4:19364648-19364667 None:intergenic 50.0%
GAGTTCAGATGCACCATACG+TGG + chr8.4:19363998-19364017 MS.gene066095:CDS 50.0%
GAGTTCTTTAAACCGGGTGG+TGG - chr8.4:19362821-19362840 None:intergenic 50.0%
GATCAAAGCCCGCGAGTTAT+AGG + chr8.4:19363670-19363689 MS.gene066095:CDS 50.0%
GCATCTGAACTCCATGCTTC+TGG - chr8.4:19363990-19364009 None:intergenic 50.0%
GCCAAATGGTTCCCGTTAGA+AGG + chr8.4:19364374-19364393 MS.gene066095:CDS 50.0%
GCCAATCTTCTCACCGTTTG+GGG - chr8.4:19362700-19362719 None:intergenic 50.0%
GCCGTTAACGGTGGTAGATT+CGG - chr8.4:19364110-19364129 None:intergenic 50.0%
GCCTCCTAAAATGGTTGCTG+TGG + chr8.4:19365636-19365655 MS.gene066095:CDS 50.0%
GGAAATCTCCAACGTAGCAC+CGG - chr8.4:19363766-19363785 None:intergenic 50.0%
GGAATCTTCTAGTGGCTCAC+CGG - chr8.4:19364246-19364265 None:intergenic 50.0%
GGCCACACAGTAAGAATCAG+TGG - chr8.4:19364600-19364619 None:intergenic 50.0%
GGTGGAACGAACAGTACACA+TGG + chr8.4:19364675-19364694 MS.gene066095:CDS 50.0%
GTTTAGGAACCCAATGCCTC+CGG + chr8.4:19365690-19365709 MS.gene066095:CDS 50.0%
TAAGATGGTAGCTCAGTGGC+TGG + chr8.4:19365039-19365058 MS.gene066095:CDS 50.0%
TACGCGCCGAAAGATATCTC+CGG + chr8.4:19363495-19363514 MS.gene066095:CDS 50.0%
TAGAAGGTGGGTCCTACTGT+GGG + chr8.4:19364390-19364409 MS.gene066095:CDS 50.0%
TCAACAAGATCCACCGTTGC+GGG + chr8.4:19363344-19363363 MS.gene066095:CDS 50.0%
TCTAACGGGAACCATTTGGC+TGG - chr8.4:19364374-19364393 None:intergenic 50.0%
TCTTCCAAAACCACCACTCG+CGG - chr8.4:19363300-19363319 None:intergenic 50.0%
TGAACACGAACTACCGGAGA+AGG - chr8.4:19363327-19363346 None:intergenic 50.0%
TGGGTCGAAGCTATCCGTTA+CGG - chr8.4:19364654-19364673 None:intergenic 50.0%
TGGTGCGATCTTCTACGAGA+AGG - chr8.4:19364274-19364293 None:intergenic 50.0%
TGTACTGTTCGTTCCACCGT+GGG - chr8.4:19364673-19364692 None:intergenic 50.0%
TGTGGAGCAAGAGGACTATC+TGG - chr8.4:19363864-19363883 None:intergenic 50.0%
TTAGAAGGTGGGTCCTACTG+TGG + chr8.4:19364389-19364408 MS.gene066095:CDS 50.0%
TTCCATTCCGGCGAGTCATT+GGG - chr8.4:19363705-19363724 None:intergenic 50.0%
TTCGTTGGGCCTATAACTCG+CGG - chr8.4:19363682-19363701 None:intergenic 50.0%
! ACCACAGCATGTCGTTTCAC+TGG + chr8.4:19364198-19364217 MS.gene066095:CDS 50.0%
! ACGACGCTTTTCCAGAAGCA+TGG + chr8.4:19363976-19363995 MS.gene066095:CDS 50.0%
! CACCTTCTAAACAGAGGCGT+AGG - chr8.4:19364424-19364443 None:intergenic 50.0%
! CTACATTCGTCCACTTGGTG+TGG + chr8.4:19364985-19365004 MS.gene066095:CDS 50.0%
! CTGGCGTATGTTTGCTGATG+TGG + chr8.4:19364745-19364764 MS.gene066095:CDS 50.0%
! CTTCTAAACAGAGGCGTAGG+TGG - chr8.4:19364421-19364440 None:intergenic 50.0%
! GAATCAGTGGACCCTTTTCC+TGG - chr8.4:19364587-19364606 None:intergenic 50.0%
! GCCACAGCAACCATTTTAGG+AGG - chr8.4:19365640-19365659 None:intergenic 50.0%
! TAACGGATAGCTTCGACCCA+CGG + chr8.4:19364654-19364673 MS.gene066095:CDS 50.0%
! TGGAACCAGGTTTTTGCCCT+TGG + chr8.4:19363720-19363739 MS.gene066095:CDS 50.0%
! TGGTTCGGGTTCGTTATGAC+AGG + chr8.4:19365461-19365480 MS.gene066095:CDS 50.0%
! TTCAAACTAGCCGGAGGCAT+TGG - chr8.4:19365703-19365722 None:intergenic 50.0%
! TTCACGAACGGGCTTTCAGT+TGG - chr8.4:19363624-19363643 None:intergenic 50.0%
!! CATCCGATGATGGGTGAAGA+GGG + chr8.4:19363213-19363232 MS.gene066095:CDS 50.0%
!! CATTGTGTGCCACTTCCTGA+CGG + chr8.4:19363264-19363283 MS.gene066095:CDS 50.0%
!! GGGCTGTTGGATTAGCTAAG+TGG + chr8.4:19365182-19365201 MS.gene066095:CDS 50.0%
!! TCAAACTAGCCGGAGGCATT+GGG - chr8.4:19365702-19365721 None:intergenic 50.0%
!! TGCTTCTGGAAAAGCGTCGT+CGG - chr8.4:19363976-19363995 None:intergenic 50.0%
!! TGGATGCTGACTCACATGCT+TGG + chr8.4:19365107-19365126 MS.gene066095:CDS 50.0%
AAAACCACCACTCGCGGTGA+AGG - chr8.4:19363294-19363313 None:intergenic 55.0%
AACCCAATGACTCGCCGGAA+TGG + chr8.4:19363700-19363719 MS.gene066095:CDS 55.0%
AACGGTGAGAAGATTGGCGG+TGG + chr8.4:19362702-19362721 MS.gene066095:CDS 55.0%
AAGTTCCAGCCCTTACGTGG+TGG + chr8.4:19362768-19362787 MS.gene066095:CDS 55.0%
ACCAAGGAAGCGGCGTTACT+CGG + chr8.4:19364293-19364312 MS.gene066095:CDS 55.0%
ACGCGCCGAAAGATATCTCC+GGG + chr8.4:19363496-19363515 MS.gene066095:CDS 55.0%
ACGTCAGAGGAATGACGACG+TGG - chr8.4:19364319-19364338 None:intergenic 55.0%
AGATCGCACCACCAAGGAAG+CGG + chr8.4:19364283-19364302 MS.gene066095:CDS 55.0%
AGGAAGTTCCAGCCCTTACG+TGG + chr8.4:19362765-19362784 MS.gene066095:CDS 55.0%
CAAAACGCCGGTAGAGTCTC+CGG + chr8.4:19363915-19363934 MS.gene066095:CDS 55.0%
CAACGAACCCAATGACTCGC+CGG + chr8.4:19363695-19363714 MS.gene066095:CDS 55.0%
CAATGGTACCGTCTCGAAGG+TGG + chr8.4:19363882-19363901 MS.gene066095:CDS 55.0%
CAGTCACAGGCATCCGATGA+TGG + chr8.4:19363203-19363222 MS.gene066095:CDS 55.0%
CCACAATGGTACCGTCTCGA+AGG + chr8.4:19363879-19363898 MS.gene066095:CDS 55.0%
CCGATGAAATCCAAGGGTCC+AGG + chr8.4:19364566-19364585 MS.gene066095:CDS 55.0%
CCGCCAATCTTCTCACCGTT+TGG - chr8.4:19362702-19362721 None:intergenic 55.0%
CCGCCGAGAAATTGCTCTGT+AGG - chr8.4:19363801-19363820 None:intergenic 55.0%
CCTTCGAGACGGTACCATTG+TGG - chr8.4:19363882-19363901 None:intergenic 55.0%
CGAACCCGAACCAAATCAGG+TGG - chr8.4:19365454-19365473 None:intergenic 55.0%
CGCTGTTCGATTGACGTCAG+AGG - chr8.4:19364332-19364351 None:intergenic 55.0%
CGGTACCATTGTGGAGCAAG+AGG - chr8.4:19363873-19363892 None:intergenic 55.0%
CGTAGAAGATCGCACCACCA+AGG + chr8.4:19364277-19364296 MS.gene066095:CDS 55.0%
CTAATCTCCGGCGCCGTTAA+CGG - chr8.4:19364122-19364141 None:intergenic 55.0%
CTTGGAATCTTAGGCGCTCG+TGG + chr8.4:19364536-19364555 MS.gene066095:CDS 55.0%
GATGTACGCTCAACCGGAAC+CGG + chr8.4:19363368-19363387 MS.gene066095:CDS 55.0%
GCAACGACGCCGTTTCAACA+AGG + chr8.4:19362670-19362689 MS.gene066095:CDS 55.0%
GCCAGTGAAACGACATGCTG+TGG - chr8.4:19364202-19364221 None:intergenic 55.0%
GCCCCAAACGGTGAGAAGAT+TGG + chr8.4:19362696-19362715 MS.gene066095:CDS 55.0%
GGCGAGTCATTGGGTTCGTT+GGG - chr8.4:19363696-19363715 None:intergenic 55.0%
GGTCAGAACCCGAACCGTAA+CGG + chr8.4:19364637-19364656 MS.gene066095:CDS 55.0%
GTCCCACCGCGAAATCTCTA+TGG + chr8.4:19364489-19364508 MS.gene066095:CDS 55.0%
GTGTACTGTTCGTTCCACCG+TGG - chr8.4:19364674-19364693 None:intergenic 55.0%
GTTCCATTCCGGCGAGTCAT+TGG - chr8.4:19363706-19363725 None:intergenic 55.0%
TATGTCGCCGGAGACTCTAC+CGG - chr8.4:19363925-19363944 None:intergenic 55.0%
TCAACAAGGACCGCCCCAAA+CGG + chr8.4:19362684-19362703 MS.gene066095:CDS 55.0%
TCGTTGGGCCTATAACTCGC+GGG - chr8.4:19363681-19363700 None:intergenic 55.0%
TGAGCGTACATCTCCCGCAA+CGG - chr8.4:19363360-19363379 None:intergenic 55.0%
TGGGGCGGTCCTTGTTGAAA+CGG - chr8.4:19362682-19362701 None:intergenic 55.0%
! ACGAACGGGCTTTCAGTTGG+AGG - chr8.4:19363621-19363640 None:intergenic 55.0%
! GCAGTGTTAGCTTGGGCTGT+TGG + chr8.4:19365169-19365188 MS.gene066095:CDS 55.0%
! TAGGTGGACTCTCCCACAGT+AGG - chr8.4:19364405-19364424 None:intergenic 55.0%
! TTCACCGCGAGTGGTGGTTT+TGG + chr8.4:19363293-19363312 MS.gene066095:CDS 55.0%
!! CAACGTAGCACCGGTTGCAT+CGG - chr8.4:19363757-19363776 None:intergenic 55.0%
!! GCATCCGATGATGGGTGAAG+AGG + chr8.4:19363212-19363231 MS.gene066095:CDS 55.0%
ACCATTTGGCTGGCACGTGG+CGG - chr8.4:19364364-19364383 None:intergenic 60.0%
CCAACAGGAGGCTTTACGCG+GGG + chr8.4:19365009-19365028 MS.gene066095:CDS 60.0%
CCCAACAGGAGGCTTTACGC+GGG + chr8.4:19365008-19365027 MS.gene066095:CDS 60.0%
CCCGCGTAAAGCCTCCTGTT+GGG - chr8.4:19365011-19365030 None:intergenic 60.0%
CGAACAACCTCGTGCCCCAT+CGG - chr8.4:19365079-19365098 None:intergenic 60.0%
CGAAGTCCGCCACCACGTAA+GGG - chr8.4:19362780-19362799 None:intergenic 60.0%
CGGCGAGTCATTGGGTTCGT+TGG - chr8.4:19363697-19363716 None:intergenic 60.0%
GAAGGAGGACCGTCAGGAAG+TGG - chr8.4:19363276-19363295 None:intergenic 60.0%
GAGCGAGTGTGTGCCACGTA+TGG - chr8.4:19364014-19364033 None:intergenic 60.0%
GAGTAACGCCGCTTCCTTGG+TGG - chr8.4:19364294-19364313 None:intergenic 60.0%
GCCCAACAGGAGGCTTTACG+CGG + chr8.4:19365007-19365026 MS.gene066095:CDS 60.0%
GCGGGAGATGTACGCTCAAC+CGG + chr8.4:19363362-19363381 MS.gene066095:CDS 60.0%
GGAACCATTTGGCTGGCACG+TGG - chr8.4:19364367-19364386 None:intergenic 60.0%
GGCGCAGCAGAACAAAACGC+CGG + chr8.4:19363903-19363922 MS.gene066095:CDS 60.0%
TCCTGTTGGGCCACACCAAG+TGG - chr8.4:19364998-19365017 None:intergenic 60.0%
TCGAAGTCCGCCACCACGTA+AGG - chr8.4:19362781-19362800 None:intergenic 60.0%
TCTACCACCGTTAACGGCGC+CGG + chr8.4:19364112-19364131 MS.gene066095:CDS 60.0%
TGACTCGCCGGAATGGAACC+AGG + chr8.4:19363707-19363726 MS.gene066095:CDS 60.0%
TTCCAGCCCTTACGTGGTGG+CGG + chr8.4:19362771-19362790 MS.gene066095:CDS 60.0%
! GGACCCTTTTCCTGGACCCT+TGG - chr8.4:19364579-19364598 None:intergenic 60.0%
! GGCGCCGGAGATTAGAGTGA+AGG + chr8.4:19364127-19364146 MS.gene066095:CDS 60.0%
!! ACTTGGTGTGGCCCAACAGG+AGG + chr8.4:19364997-19365016 MS.gene066095:CDS 60.0%
!! CGATGCAACCGGTGCTACGT+TGG + chr8.4:19363755-19363774 MS.gene066095:CDS 60.0%
!! TACGTGGTGGCGGACTTCGA+CGG + chr8.4:19362781-19362800 MS.gene066095:CDS 60.0%
!! TCCACTTGGTGTGGCCCAAC+AGG + chr8.4:19364994-19365013 MS.gene066095:CDS 60.0%
ACAACCTCGTGCCCCATCGG+AGG - chr8.4:19365076-19365095 None:intergenic 65.0%
ACCACCACTCGCGGTGAAGG+AGG - chr8.4:19363291-19363310 None:intergenic 65.0%
ACCGCCACGTGCCAGCCAAA+TGG + chr8.4:19364360-19364379 MS.gene066095:CDS 65.0%
ACGCGGGGCAGCCACTAAGA+TGG + chr8.4:19365024-19365043 MS.gene066095:CDS 65.0%
ACGGTGGCGCAGAGCAAGAG+AGG + chr8.4:19363172-19363191 MS.gene066095:CDS 65.0%
ATCTCCGGCGCCGTTAACGG+TGG - chr8.4:19364119-19364138 None:intergenic 65.0%
CCCCGCGTAAAGCCTCCTGT+TGG - chr8.4:19365012-19365031 None:intergenic 65.0%
CGGATAGCTTCGACCCACGG+TGG + chr8.4:19364657-19364676 MS.gene066095:CDS 65.0%
CGTGGCACACACTCGCTCCA+AGG + chr8.4:19364016-19364035 MS.gene066095:CDS 65.0%
CTCGCTCAGAGCCTCCGATG+GGG + chr8.4:19365062-19365081 MS.gene066095:CDS 65.0%
CTGCTGCGCCACCTTCGAGA+CGG - chr8.4:19363893-19363912 None:intergenic 65.0%
GCAAGAACAACCACCGCCGC+CGG + chr8.4:19363138-19363157 MS.gene066095:CDS 65.0%
GCCGAGTAACGCCGCTTCCT+TGG - chr8.4:19364297-19364316 None:intergenic 65.0%
GCGTACATCTCCCGCAACGG+TGG - chr8.4:19363357-19363376 None:intergenic 65.0%
GCTCGCTCAGAGCCTCCGAT+GGG + chr8.4:19365061-19365080 MS.gene066095:CDS 65.0%
TCCTCCTTCACCGCGAGTGG+TGG + chr8.4:19363287-19363306 MS.gene066095:CDS 65.0%
AGAGCCTCCGATGGGGCACG+AGG + chr8.4:19365069-19365088 MS.gene066095:CDS 70.0%
CGCGGTGAAGGAGGACCGTC+AGG - chr8.4:19363282-19363301 None:intergenic 70.0%
CGGTCCTCCTTCACCGCGAG+TGG + chr8.4:19363284-19363303 MS.gene066095:CDS 70.0%
GGCTCGCTCAGAGCCTCCGA+TGG + chr8.4:19365060-19365079 MS.gene066095:CDS 70.0%
GTCCGCCACCACGTAAGGGC+TGG - chr8.4:19362776-19362795 None:intergenic 70.0%
! ACCGTGCCGCTCTTCTCCGG+CGG - chr8.4:19363157-19363176 None:intergenic 70.0%
! GCCACCGTGCCGCTCTTCTC+CGG - chr8.4:19363160-19363179 None:intergenic 70.0%
!! CGGTTCGGTTCGCTTGCCCC+GGG + chr8.4:19364909-19364928 MS.gene066095:CDS 70.0%
!! GCGGTTCGGTTCGCTTGCCC+CGG + chr8.4:19364908-19364927 MS.gene066095:CDS 70.0%
CCACCGCCGCCGGAGAAGAG+CGG + chr8.4:19363148-19363167 MS.gene066095:CDS 75.0%
GCCGCCGGAGAAGAGCGGCA+CGG + chr8.4:19363153-19363172 MS.gene066095:CDS 75.0%
GCCGGAGAAGAGCGGCACGG+TGG + chr8.4:19363156-19363175 MS.gene066095:CDS 75.0%
! GTGCCGCTCTTCTCCGGCGG+CGG - chr8.4:19363154-19363173 None:intergenic 75.0%
! CCGCTCTTCTCCGGCGGCGG+TGG - chr8.4:19363151-19363170 None:intergenic 80.0%


Chromosome Type Strat End Strand Name
chr8.4 gene 19362667 19365765 19362667 ID=MS.gene066095
chr8.4 mRNA 19362667 19365765 19362667 ID=MS.gene066095.t1;Parent=MS.gene066095
chr8.4 exon 19362667 19362918 19362667 ID=MS.gene066095.t1.exon1;Parent=MS.gene066095.t1
chr8.4 CDS 19362667 19362918 19362667 ID=cds.MS.gene066095.t1;Parent=MS.gene066095.t1
chr8.4 exon 19363111 19365765 19363111 ID=MS.gene066095.t1.exon2;Parent=MS.gene066095.t1
chr8.4 CDS 19363111 19365765 19363111 ID=cds.MS.gene066095.t1;Parent=MS.gene066095.t1
Gene Sequence

>MS.gene066095

ATGGCAACGACGCCGTTTCAACAAGGACCGCCCCAAACGGTGAGAAGATTGGCGGTGGAAGTTGTTGACGCACGCAACCTTCTTCCCAAAGATGGTCAAGGAAGTTCCAGCCCTTACGTGGTGGCGGACTTCGACGGTCAGAGAAAACGAACCACCACCCGGTTTAAAGAACTCAACCCGGTTTGGAACGAGTTGCTTGAGTTCATCGTTTCTGACCCGGAGAATATGGAGTTTGAAGAGCTTGAAGTTGAGGTTTATAATGATAAGAAATTTGGGAATGGTAGTGGTCGCAAGAATCATTTTCTTGGTAGGGTTAAGCTTTATGGAACACAGTTTTCTTGTAGAGGTGAAGAAGCTTTGGTTTATTATACTTTAGAGAAGAAAGTGTTTCAGTTGGATTAGAGGTGAATCGGTTTGAAGATTTAATACGATGAGTTGTTACAGCAAGATGAACATCAGGCAGCAGCAGCAGCAAGAACAACCACCGCCGCCGGAGAAGAGCGGCACGGTGGCGCAGAGCAAGAGAGGAACAATCACAGTCACAGGCATCCGATGATGGGTGAAGAGGGAAGAGTTTATCAGGTTGAACAGATGGAGCATTGTGTGCCACTTCCTGACGGTCCTCCTTCACCGCGAGTGGTGGTTTTGGAAGAATCACCTTCTCCGGTAGTTCGTGTTCAACAAGATCCACCGTTGCGGGAGATGTACGCTCAACCGGAACCGGAAATGCAGTATCATCATCATCATCCTGACGTGAGGAAAATGCAAACAATGAGGAATGATAGAGTGAAGATTATGAAGAGACCTAATGGTAACGGTAATGGTGATTACGCGCCGAAAGATATCTCCGGGAAGAAACCTAACGGTGAATCTGAGAGGATTCATCCCTATGATCTAGTTGAACCAATGCAGTATCTGTTTGTTAGAATCGTGAAGGTTCGCGGGCTTAATCCTCCAACTGAAAGCCCGTTCGTGAAGGTTAGAACCTCAAGTCACTACGTCAGATCAAAGCCCGCGAGTTATAGGCCCAACGAACCCAATGACTCGCCGGAATGGAACCAGGTTTTTGCCCTTGGTTACAGCAAAACCGATGCAACCGGTGCTACGTTGGAGATTTCCGTTTGGGATTCACCTACAGAGCAATTTCTCGGCGGTGTTTGCTTTGATCTTTCTGATGTACCTATTCGTGATTCTCCAGATAGTCCTCTTGCTCCACAATGGTACCGTCTCGAAGGTGGCGCAGCAGAACAAAACGCCGGTAGAGTCTCCGGCGACATACAACTTTCCGTTTGGATCGGAACTCAATCCGACGACGCTTTTCCAGAAGCATGGAGTTCAGATGCACCATACGTGGCACACACTCGCTCCAAGGTTTATCAATCACCGAAGCTTTGGTATCTGAGAGTAACAGTCATGGAAGCACAAGACCTGAATCTAACTCCGAATCTACCACCGTTAACGGCGCCGGAGATTAGAGTGAAGGTACAATTAGGGTTTCAATCACAGAGAACAAGAAGAGGCTCAATGAACCACCACAGCATGTCGTTTCACTGGCACGAAGATCTTCTCTTCGTCGCCGGTGAGCCACTAGAAGATTCCATGGTCCTTCTCGTAGAAGATCGCACCACCAAGGAAGCGGCGTTACTCGGCCACGTCGTCATTCCTCTGACGTCAATCGAACAGCGAATAGACGACCGCCACGTGCCAGCCAAATGGTTCCCGTTAGAAGGTGGGTCCTACTGTGGGAGAGTCCACCTACGCCTCTGTTTAGAAGGTGGTTATCACGTGCTTGATGAAGCGGCGCACGTGTGTAGTGATTTTCGTCCCACCGCGAAATCTCTATGGAAACCTCCAGTTGGAATTCTTGAACTTGGAATCTTAGGCGCTCGTGGTCTTCTTCCGATGAAATCCAAGGGTCCAGGAAAAGGGTCCACTGATTCTTACTGTGTGGCCAAGTATGGCAAAAAATGGGTCAGAACCCGAACCGTAACGGATAGCTTCGACCCACGGTGGAACGAACAGTACACATGGCAGGTATATGATCCTTGCACTGTCTTAACCGTAGGTGTATTTGACAACTGGCGTATGTTTGCTGATGTGGCAGAAGAAAAACCAGATTGCCGTATAGGTAAAATTCGTATACGAGTTTCTACACTAGAGAGCAATAAAATCTACACAAGTTCATATCCATTACTGGTTCTGACTCGAAACGGCTTGAAGAAAATGGGTGAAATCGAGTTAGCGGTTCGGTTCGCTTGCCCCGGGTTTTTTCCTGACACATGTGCGGTTTATCAACAACCATTACTTCCAAAAATGCACTACATTCGTCCACTTGGTGTGGCCCAACAGGAGGCTTTACGCGGGGCAGCCACTAAGATGGTAGCTCAGTGGCTGGCTCGCTCAGAGCCTCCGATGGGGCACGAGGTTGTTCGATACATGTTGGATGCTGACTCACATGCTTGGAGTATGAGGAAAAGTAAAGCCAATTGGTTTAGAATTGTGGCAGTGTTAGCTTGGGCTGTTGGATTAGCTAAGTGGTTAGATGATATAAGAAGATGGAAAAATCCAGTTACAACGGTTTTGCTTCATATACTTTACTTGGTCCTTGTTTGGTATCCAGATTTAATTGTTCCAACCGGGTTTTTATATGTTGTTTTGATTGGAATATGGTATTTCCGTTTTAGACCCAAGATACCAGCTGGTATGGATACAAGATTATCACAAGCTGAAGCCGTTGATCCAGATGAATTAGATGAAGAATTTGACACAATGCCTAGCTCCAAACCACCTGATTTGGTTCGGGTTCGTTATGACAGGTTAAGAATGTTGGCTGCAAGGGTGCAAACTGTTTTGGGTGATTTTGCAACACAAGGTGAGAGGGTTCAAGCATTGGTTAGTTGGAGAGACCCAAGAGCTACAAAATTGTTCATTGGAGTGTGTCTTGTTATTGCTATTATACTCTATTCAGTGCCTCCTAAAATGGTTGCTGTGGCTTTAGGATTCTACTATCTTCGTCATCCAATGTTTAGGAACCCAATGCCTCCGGCTAGTTTGAACTTTTTCAGAAGACTTCCTAGTTTGTCTGATAGGTTGATGTAG
Protein sequence

>MS.gene066095.t1

MATTPFQQGPPQTVRRLAVEVVDARNLLPKDGQGSSSPYVVADFDGQRKRTTTRFKELNPVWNELLEFIVSDPENMEFEELEVEQDEHQAAAAARTTTAAGEERHGGAEQERNNHSHRHPMMGEEGRVYQVEQMEHCVPLPDGPPSPRVVVLEESPSPVVRVQQDPPLREMYAQPEPEMQYHHHHPDVRKMQTMRNDRVKIMKRPNGNGNGDYAPKDISGKKPNGESERIHPYDLVEPMQYLFVRIVKVRGLNPPTESPFVKVRTSSHYVRSKPASYRPNEPNDSPEWNQVFALGYSKTDATGATLEISVWDSPTEQFLGGVCFDLSDVPIRDSPDSPLAPQWYRLEGGAAEQNAGRVSGDIQLSVWIGTQSDDAFPEAWSSDAPYVAHTRSKVYQSPKLWYLRVTVMEAQDLNLTPNLPPLTAPEIRVKVQLGFQSQRTRRGSMNHHSMSFHWHEDLLFVAGEPLEDSMVLLVEDRTTKEAALLGHVVIPLTSIEQRIDDRHVPAKWFPLEGGSYCGRVHLRLCLEGGYHVLDEAAHVCSDFRPTAKSLWKPPVGILELGILGARGLLPMKSKGPGKGSTDSYCVAKYGKKWVRTRTVTDSFDPRWNEQYTWQVYDPCTVLTVGVFDNWRMFADVAEEKPDCRIGKIRIRVSTLESNKIYTSSYPLLVLTRNGLKKMGEIELAVRFACPGFFPDTCAVYQQPLLPKMHYIRPLGVAQQEALRGAATKMVAQWLARSEPPMGHEVVRYMLDADSHAWSMRKSKANWFRIVAVLAWAVGLAKWLDDIRRWKNPVTTVLLHILYLVLVWYPDLIVPTGFLYVVLIGIWYFRFRPKIPAGMDTRLSQAEAVDPDELDEEFDTMPSSKPPDLVRVRYDRLRMLAARVQTVLGDFATQGERVQALVSWRDPRATKLFIGVCLVIAIILYSVPPKMVAVALGFYYLRHPMFRNPMPPASLNFFRRLPSLSDRLM