Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060339.t1 | XP_003609433.1 | 98.4 | 680 | 11 | 0 | 1 | 680 | 50 | 729 | 0.00E+00 | 1300.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060339.t1 | P60300 | 71.3 | 677 | 194 | 0 | 1 | 677 | 45 | 721 | 8.8e-279 | 960.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060339.t1 | G7JFF4 | 98.4 | 680 | 11 | 0 | 1 | 680 | 50 | 729 | 0.0e+00 | 1300.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049657 | MS.gene060339 | 0.843132 | 1.69E-58 | -1.69E-46 |
| MS.gene052066 | MS.gene060339 | 0.803367 | 3.61E-49 | -1.69E-46 |
| MS.gene052166 | MS.gene060339 | -0.801047 | 1.08E-48 | -1.69E-46 |
| MS.gene052486 | MS.gene060339 | 0.815828 | 7.57E-52 | -1.69E-46 |
| MS.gene053633 | MS.gene060339 | 0.841558 | 4.42E-58 | -1.69E-46 |
| MS.gene058041 | MS.gene060339 | 0.812923 | 3.32E-51 | -1.69E-46 |
| MS.gene060187 | MS.gene060339 | -0.820056 | 8.39E-53 | -1.69E-46 |
| MS.gene060339 | MS.gene060595 | -0.810317 | 1.22E-50 | -1.69E-46 |
| MS.gene060339 | MS.gene064148 | 0.814576 | 1.44E-51 | -1.69E-46 |
| MS.gene060339 | MS.gene065540 | 0.802928 | 4.45E-49 | -1.69E-46 |
| MS.gene060339 | MS.gene066095 | 0.816438 | 5.53E-52 | -1.69E-46 |
| MS.gene060339 | MS.gene066099 | 0.809658 | 1.70E-50 | -1.69E-46 |
| MS.gene060339 | MS.gene067467 | 0.80037 | 1.49E-48 | -1.69E-46 |
| MS.gene060339 | MS.gene071900 | 0.832808 | 7.65E-56 | -1.69E-46 |
| MS.gene060339 | MS.gene071901 | 0.802119 | 6.53E-49 | -1.69E-46 |
| MS.gene060339 | MS.gene07329 | 0.828234 | 1.01E-54 | -1.69E-46 |
| MS.gene060339 | MS.gene073640 | 0.816867 | 4.43E-52 | -1.69E-46 |
| MS.gene060339 | MS.gene07397 | -0.803964 | 2.71E-49 | -1.69E-46 |
| MS.gene060339 | MS.gene07636 | 0.840772 | 7.11E-58 | -1.69E-46 |
| MS.gene060339 | MS.gene08588 | 0.812137 | 4.93E-51 | -1.69E-46 |
| MS.gene060339 | MS.gene09022 | -0.863749 | 1.99E-64 | -1.69E-46 |
| MS.gene060339 | MS.gene09053 | 0.806967 | 6.36E-50 | -1.69E-46 |
| MS.gene060339 | MS.gene20878 | 0.845918 | 3.01E-59 | -1.69E-46 |
| MS.gene060339 | MS.gene21150 | 0.800206 | 1.61E-48 | -1.69E-46 |
| MS.gene060339 | MS.gene24491 | -0.804758 | 1.85E-49 | -1.69E-46 |
| MS.gene060339 | MS.gene31105 | 0.824352 | 8.45E-54 | -1.69E-46 |
| MS.gene060339 | MS.gene34025 | 0.808984 | 2.37E-50 | -1.69E-46 |
| MS.gene060339 | MS.gene34171 | 0.805738 | 1.15E-49 | -1.69E-46 |
| MS.gene060339 | MS.gene34554 | 0.814911 | 1.21E-51 | -1.69E-46 |
| MS.gene060339 | MS.gene40110 | 0.836473 | 9.17E-57 | -1.69E-46 |
| MS.gene060339 | MS.gene45542 | 0.806052 | 9.92E-50 | -1.69E-46 |
| MS.gene060339 | MS.gene51056 | 0.819298 | 1.25E-52 | -1.69E-46 |
| MS.gene060339 | MS.gene51059 | 0.819573 | 1.08E-52 | -1.69E-46 |
| MS.gene060339 | MS.gene52362 | 0.807674 | 4.50E-50 | -1.69E-46 |
| MS.gene060339 | MS.gene58021 | 0.986349 | 1.72E-166 | -1.69E-46 |
| MS.gene060339 | MS.gene63751 | -0.839104 | 1.93E-57 | -1.69E-46 |
| MS.gene060339 | MS.gene66458 | 0.802087 | 6.62E-49 | -1.69E-46 |
| MS.gene060339 | MS.gene68529 | 0.806899 | 6.58E-50 | -1.69E-46 |
| MS.gene060339 | MS.gene68625 | 0.813216 | 2.86E-51 | -1.69E-46 |
| MS.gene060339 | MS.gene68980 | 0.8035 | 3.39E-49 | -1.69E-46 |
| MS.gene060339 | MS.gene69332 | 0.840689 | 7.48E-58 | -1.69E-46 |
| MS.gene060339 | MS.gene73493 | 0.800552 | 1.37E-48 | -1.69E-46 |
| MS.gene060339 | MS.gene78396 | 0.826196 | 3.10E-54 | -1.69E-46 |
| MS.gene060339 | MS.gene82917 | 0.81426 | 1.69E-51 | -1.69E-46 |
| MS.gene060339 | MS.gene83123 | 0.812531 | 4.05E-51 | -1.69E-46 |
| MS.gene060339 | MS.gene84043 | 0.802722 | 4.90E-49 | -1.69E-46 |
| MS.gene060339 | MS.gene86071 | 0.801843 | 7.44E-49 | -1.69E-46 |
| MS.gene060339 | MS.gene89097 | -0.800663 | 1.30E-48 | -1.69E-46 |
| MS.gene060339 | MS.gene91902 | 0.807093 | 5.98E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 156 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACCTTTGGCTTTCATTATA+AGG | 0.186015 | 8.3:-10841058 | None:intergenic |
| CCATGTTATTCCATATCTTT+TGG | 0.216887 | 8.3:-10839673 | None:intergenic |
| CACAAGCACCATCATTATTA+AGG | 0.234397 | 8.3:-10840991 | None:intergenic |
| TGCTTCTATCTACAGATTAT+TGG | 0.236275 | 8.3:+10839552 | MS.gene060339:intron |
| TGTCAGTGTGCATGCTAAAT+AGG | 0.261184 | 8.3:-10840686 | None:intergenic |
| GTGTCAGGCTCTCTTGTTAT+TGG | 0.261989 | 8.3:+10839588 | MS.gene060339:CDS |
| GGCCCGCTTCAGATGTTTAA+TGG | 0.275031 | 8.3:+10841146 | MS.gene060339:CDS |
| TTACTTACACCAGGTATCTT+TGG | 0.284668 | 8.3:-10841569 | None:intergenic |
| AGCGACAAATGCGGTTTATT+CGG | 0.294443 | 8.3:+10840158 | MS.gene060339:CDS |
| GCACCTGCTGCTGCTGGTTC+AGG | 0.297503 | 8.3:+10835090 | MS.gene060339:CDS |
| GATGCACCAGTCACGATAAT+TGG | 0.304109 | 8.3:-10840807 | None:intergenic |
| CGCGGAGGCTCGTCAATAAC+AGG | 0.309334 | 8.3:-10841227 | None:intergenic |
| TCGGCGTGAGTTTCTAAATA+AGG | 0.312251 | 8.3:-10841083 | None:intergenic |
| CCTCCTTTCCAACATCATAT+TGG | 0.329761 | 8.3:-10834879 | None:intergenic |
| CTTGGCGCCGCTTCTCTTCT+CGG | 0.330337 | 8.3:+10840897 | MS.gene060339:CDS |
| CGTTGTGTGCTGTTGTTCTA+AGG | 0.331546 | 8.3:-10841199 | None:intergenic |
| GGTGGAGAACTGCCCTTCTA+TGG | 0.344587 | 8.3:+10840072 | MS.gene060339:intron |
| TGGGCGCCTGGTTGGAATAT+TGG | 0.344948 | 8.3:+10840833 | MS.gene060339:CDS |
| TGTCAGGCTCTCTTGTTATT+GGG | 0.347800 | 8.3:+10839589 | MS.gene060339:CDS |
| TAAGGCGAAGCATTAGTAAA+AGG | 0.352400 | 8.3:-10841467 | None:intergenic |
| TTATTAAGGGTAGCAATAAC+AGG | 0.368806 | 8.3:-10840977 | None:intergenic |
| GGGTAGCAATAACAGGTTAT+TGG | 0.369840 | 8.3:-10840970 | None:intergenic |
| TTTATAGCACCTGCTGCTGC+TGG | 0.370401 | 8.3:+10835084 | MS.gene060339:CDS |
| GCAAACAAGACGCCGCCAAC+AGG | 0.371987 | 8.3:-10839786 | None:intergenic |
| AGCAAGTATTTCATACCATT+TGG | 0.381101 | 8.3:+10840214 | MS.gene060339:CDS |
| ACAGTAGGTGATGTAGTTAC+AGG | 0.385155 | 8.3:+10841125 | MS.gene060339:CDS |
| TGCATGTGTGGCAGCATTGT+TGG | 0.386826 | 8.3:+10839638 | MS.gene060339:CDS |
| TTTATGATTGGTTTAATTGT+TGG | 0.388222 | 8.3:+10834791 | MS.gene060339:CDS |
| CTCTTGAAGAGATGGCATCT+TGG | 0.393356 | 8.3:+10839808 | MS.gene060339:CDS |
| CAGGGAGGTTCCAAAAGATA+TGG | 0.397062 | 8.3:+10839663 | MS.gene060339:CDS |
| ATCGTGACTGGTGCATCGTA+TGG | 0.406138 | 8.3:+10840813 | MS.gene060339:CDS |
| CTTGCTGTTGAGAATCTTGC+TGG | 0.409241 | 8.3:+10834836 | MS.gene060339:CDS |
| CAGGTGCATCAACACCATTT+AGG | 0.409541 | 8.3:-10835134 | None:intergenic |
| GAAAACATTTGCTACACTCT+TGG | 0.413686 | 8.3:-10841018 | None:intergenic |
| ATTGTTTCCACAACAGTGTA+AGG | 0.418715 | 8.3:-10841485 | None:intergenic |
| ACTGTTAACTGCCTCATATA+TGG | 0.424377 | 8.3:-10841107 | None:intergenic |
| GAGGTGAAGGCTTACCTAAA+TGG | 0.426989 | 8.3:+10835120 | MS.gene060339:CDS |
| TGGTGCATCGTATGGGCGCC+TGG | 0.427470 | 8.3:+10840821 | MS.gene060339:CDS |
| TGTGGCAGCATTGTTGGGTC+AGG | 0.431762 | 8.3:+10839644 | MS.gene060339:CDS |
| TATTGACGAGCCTCCGCGTT+CGG | 0.433552 | 8.3:+10841232 | MS.gene060339:CDS |
| ATGAATTCTTCAAGCAGGAT+TGG | 0.436516 | 8.3:+10834711 | MS.gene060339:CDS |
| TCTTTAACAATGTGATAAGA+TGG | 0.439274 | 8.3:-10841289 | None:intergenic |
| GCTGCTTTCCGTGCCCCTGT+TGG | 0.441887 | 8.3:+10839771 | MS.gene060339:CDS |
| TATTGGGAAGGCAGGGCCTA+TGG | 0.443171 | 8.3:+10839605 | MS.gene060339:CDS |
| TCTCTTGTTATTGGGAAGGC+AGG | 0.446459 | 8.3:+10839597 | MS.gene060339:CDS |
| TTCTAAATAAGGCAAACCTT+TGG | 0.449470 | 8.3:-10841072 | None:intergenic |
| GCATGTGTGGCAGCATTGTT+GGG | 0.449956 | 8.3:+10839639 | MS.gene060339:CDS |
| CTTGTTTGCTCTTGAAGAGA+TGG | 0.450612 | 8.3:+10839800 | MS.gene060339:CDS |
| AATGCGGTTTATTCGGTAAA+GGG | 0.451892 | 8.3:+10840165 | MS.gene060339:CDS |
| CGGCGCCAAGTACAGCATAA+AGG | 0.456444 | 8.3:-10840884 | None:intergenic |
| GGACAAGGCTCAACAGCATC+AGG | 0.458226 | 8.3:-10840558 | None:intergenic |
| GTTGAGCCTTGTCCAACAAT+AGG | 0.459772 | 8.3:+10840567 | MS.gene060339:CDS |
| GCTGTTGTAGGAGGGTTACT+TGG | 0.461931 | 8.3:+10840263 | MS.gene060339:CDS |
| GCCTCCGCGTTCGGAAGCTC+CGG | 0.464843 | 8.3:+10841241 | MS.gene060339:CDS |
| TTTATTCTTGCTGTTGTAGG+AGG | 0.468757 | 8.3:+10840254 | MS.gene060339:CDS |
| ATAAAGGCCATTGCTAAGAT+TGG | 0.469416 | 8.3:-10840868 | None:intergenic |
| GCAAGGCCATTGTAGTGATT+AGG | 0.473948 | 8.3:-10840624 | None:intergenic |
| TAAGAACGACCGTGATCGAC+GGG | 0.474634 | 8.3:+10839713 | MS.gene060339:CDS |
| TGTGGAATTGTTGCCCCGGC+CGG | 0.479171 | 8.3:+10840774 | MS.gene060339:CDS |
| AATGGCCTTTATGCTGTACT+TGG | 0.480398 | 8.3:+10840879 | MS.gene060339:CDS |
| GGAAGCATTACAGCAGTGTC+AGG | 0.481583 | 8.3:+10839573 | MS.gene060339:CDS |
| GATTGAGGATATACAGTTAA+CGG | 0.484019 | 8.3:+10841412 | MS.gene060339:CDS |
| CAAACAAGACGCCGCCAACA+GGG | 0.485853 | 8.3:-10839785 | None:intergenic |
| ATACCAGATCGACCTATTGT+TGG | 0.487788 | 8.3:-10840579 | None:intergenic |
| GCATCGTATGGGCGCCTGGT+TGG | 0.489916 | 8.3:+10840825 | MS.gene060339:CDS |
| CGCCTGGTTGGAATATTGGT+TGG | 0.493221 | 8.3:+10840837 | MS.gene060339:CDS |
| TAACTGCCTCATATATGGTT+CGG | 0.497631 | 8.3:-10841102 | None:intergenic |
| CTCTTGTTATTGGGAAGGCA+GGG | 0.499318 | 8.3:+10839598 | MS.gene060339:CDS |
| ATTGCTACCCTTAATAATGA+TGG | 0.499487 | 8.3:+10840983 | MS.gene060339:CDS |
| ATAATATGTGGATCAGCAGC+TGG | 0.500065 | 8.3:+10839741 | MS.gene060339:CDS |
| ATGCCTGAACCAGCAGCAGC+AGG | 0.501410 | 8.3:-10835093 | None:intergenic |
| ACAAGCACCATCATTATTAA+GGG | 0.504610 | 8.3:-10840990 | None:intergenic |
| AAATGCGGTTTATTCGGTAA+AGG | 0.505387 | 8.3:+10840164 | MS.gene060339:CDS |
| TGAGAATGAATTCTTCAAGC+AGG | 0.510740 | 8.3:+10834706 | MS.gene060339:CDS |
| AGTTGAACGTGTGAAGATTG+AGG | 0.511472 | 8.3:+10841397 | MS.gene060339:CDS |
| TGTAGTGATTAGGAGGGCAT+TGG | 0.511498 | 8.3:-10840614 | None:intergenic |
| ACAGTTAACGGAGGAAGAGA+TGG | 0.511642 | 8.3:+10841424 | MS.gene060339:CDS |
| TGTCCAACAATAGGTCGATC+TGG | 0.512182 | 8.3:+10840576 | MS.gene060339:CDS |
| CAGGAGGAACATCTACCAAA+TGG | 0.514395 | 8.3:-10840229 | None:intergenic |
| TTCCAACATCATATTGGATG+TGG | 0.515396 | 8.3:-10834873 | None:intergenic |
| AGCAGGATTGGAGAAGTAGA+GGG | 0.517042 | 8.3:+10834723 | MS.gene060339:CDS |
| TGGCACAAACAGACCGGCCG+GGG | 0.518821 | 8.3:-10840787 | None:intergenic |
| TGCAGTATATATGTATGAAG+TGG | 0.523408 | 8.3:+10834759 | MS.gene060339:CDS |
| AGGATTATACCGAATAAAAC+CGG | 0.523972 | 8.3:-10841260 | None:intergenic |
| GCAGGGCCTATGGTGCATAC+AGG | 0.525611 | 8.3:+10839615 | MS.gene060339:CDS |
| CTCTTCTCGGTGGATCTATG+AGG | 0.526330 | 8.3:+10840910 | MS.gene060339:CDS |
| TTGGCACAAACAGACCGGCC+GGG | 0.527250 | 8.3:-10840788 | None:intergenic |
| CTTAATAATGATGGTGCTTG+TGG | 0.527699 | 8.3:+10840992 | MS.gene060339:CDS |
| AGGCTCTCTTGTTATTGGGA+AGG | 0.528136 | 8.3:+10839593 | MS.gene060339:CDS |
| GCTTTCCGTGCCCCTGTTGG+CGG | 0.532883 | 8.3:+10839774 | MS.gene060339:CDS |
| TTATTCTTGCTGTTGTAGGA+GGG | 0.533940 | 8.3:+10840255 | MS.gene060339:CDS |
| GATGTTTAATGGCATAGAGA+AGG | 0.537838 | 8.3:+10841157 | MS.gene060339:CDS |
| CATGCACCTGTATGCACCAT+AGG | 0.537839 | 8.3:-10839621 | None:intergenic |
| CGACGGGATCTAATAATATG+TGG | 0.538742 | 8.3:+10839729 | MS.gene060339:CDS |
| TAACTATTCGTCATGGGTGA+TGG | 0.539781 | 8.3:-10841326 | None:intergenic |
| ATTCGAGCTTTCGTCAATGT+TGG | 0.540164 | 8.3:+10840713 | MS.gene060339:CDS |
| GGAAACAATGTCACTGGCAA+AGG | 0.542046 | 8.3:+10841499 | MS.gene060339:CDS |
| TGCCATTAAACATCTGAAGC+GGG | 0.542581 | 8.3:-10841148 | None:intergenic |
| CACCACATCCAATATGATGT+TGG | 0.542849 | 8.3:+10834871 | MS.gene060339:CDS |
| AGGCCATTGTAGTGATTAGG+AGG | 0.544990 | 8.3:-10840621 | None:intergenic |
| CTCACGCCGAACCATATATG+AGG | 0.547878 | 8.3:+10841096 | MS.gene060339:CDS |
| CTCGTGATACCAAAGATACC+TGG | 0.549665 | 8.3:+10841560 | MS.gene060339:CDS |
| AGACGCCGCCAACAGGGGCA+CGG | 0.550712 | 8.3:-10839779 | None:intergenic |
| AAGCAGGATTGGAGAAGTAG+AGG | 0.553746 | 8.3:+10834722 | MS.gene060339:CDS |
| TTTGTGCCAATTATCGTGAC+TGG | 0.556778 | 8.3:+10840801 | MS.gene060339:CDS |
| GTGGCAGCATTGTTGGGTCA+GGG | 0.558955 | 8.3:+10839645 | MS.gene060339:CDS |
| TGCTTCGCCTTACACTGTTG+TGG | 0.563362 | 8.3:+10841478 | MS.gene060339:CDS |
| AAACAAGACGCCGCCAACAG+GGG | 0.564819 | 8.3:-10839784 | None:intergenic |
| CTAAATGGTGTTGATGCACC+TGG | 0.567226 | 8.3:+10835135 | MS.gene060339:CDS |
| TTAAGAACGACCGTGATCGA+CGG | 0.567551 | 8.3:+10839712 | MS.gene060339:CDS |
| GACCTTATAATGAAAGCCAA+AGG | 0.568633 | 8.3:+10841056 | MS.gene060339:CDS |
| TGCGGTTTATTCGGTAAAGG+GGG | 0.569114 | 8.3:+10840167 | MS.gene060339:CDS |
| GATATGGAATAACATGGAGA+TGG | 0.572288 | 8.3:+10839679 | MS.gene060339:CDS |
| TTCAGGCATATCAGAGGTGA+AGG | 0.573293 | 8.3:+10835107 | MS.gene060339:CDS |
| TCGTGACTGGTGCATCGTAT+GGG | 0.575344 | 8.3:+10840814 | MS.gene060339:CDS |
| ATTGGCACAAACAGACCGGC+CGG | 0.578513 | 8.3:-10840789 | None:intergenic |
| TTATTAGATCCCGTCGATCA+CGG | 0.579129 | 8.3:-10839722 | None:intergenic |
| GACATCGTAACTATTCGTCA+TGG | 0.579276 | 8.3:-10841333 | None:intergenic |
| TAGCTGTGGAATTGTTGCCC+CGG | 0.584238 | 8.3:+10840770 | MS.gene060339:CDS |
| CAGTTAACGGAGGAAGAGAT+GGG | 0.584746 | 8.3:+10841425 | MS.gene060339:CDS |
| TTGGAATATTGGTTGGAGAA+CGG | 0.585282 | 8.3:+10840844 | MS.gene060339:CDS |
| GATAATTGGCACAAACAGAC+CGG | 0.589695 | 8.3:-10840793 | None:intergenic |
| CCAAAAGATATGGAATAACA+TGG | 0.589697 | 8.3:+10839673 | MS.gene060339:CDS |
| CCAATATGATGTTGGAAAGG+AGG | 0.593550 | 8.3:+10834879 | MS.gene060339:CDS |
| CATCCAATATGATGTTGGAA+AGG | 0.600587 | 8.3:+10834876 | MS.gene060339:CDS |
| CTCCAACCAATATTCCAACC+AGG | 0.602011 | 8.3:-10840839 | None:intergenic |
| ATGCGGTTTATTCGGTAAAG+GGG | 0.610005 | 8.3:+10840166 | MS.gene060339:CDS |
| ATGCCATTAAACATCTGAAG+CGG | 0.615505 | 8.3:-10841149 | None:intergenic |
| TGTTGTGGAAACAATGTCAC+TGG | 0.617414 | 8.3:+10841493 | MS.gene060339:CDS |
| TAATATGTGGATCAGCAGCT+GGG | 0.620560 | 8.3:+10839742 | MS.gene060339:CDS |
| ACATCGTAACTATTCGTCAT+GGG | 0.622266 | 8.3:-10841332 | None:intergenic |
| GCGGTTTATTCGGTAAAGGG+GGG | 0.629930 | 8.3:+10840168 | MS.gene060339:CDS |
| GAACGGACCAATCTTAGCAA+TGG | 0.630884 | 8.3:+10840861 | MS.gene060339:CDS |
| TATATGAGGCAGTTAACAGT+AGG | 0.631627 | 8.3:+10841110 | MS.gene060339:CDS |
| CAGCATCAGGAGGACAAGGT+CGG | 0.633252 | 8.3:-10840545 | None:intergenic |
| ATGTGATAAGATGGTCGCGA+AGG | 0.633929 | 8.3:-10841280 | None:intergenic |
| GCAGCATTGTTGGGTCAGGG+AGG | 0.634000 | 8.3:+10839648 | MS.gene060339:CDS |
| GGTGCATACAGGTGCATGTG+TGG | 0.639747 | 8.3:+10839626 | MS.gene060339:CDS |
| AGATCCACCGAGAAGAGAAG+CGG | 0.642785 | 8.3:-10840904 | None:intergenic |
| AAAACCGGAGCTTCCGAACG+CGG | 0.648639 | 8.3:-10841245 | None:intergenic |
| GGCGCCGCTTCTCTTCTCGG+TGG | 0.649897 | 8.3:+10840900 | MS.gene060339:CDS |
| TCAACAGCATCAGGAGGACA+AGG | 0.655016 | 8.3:-10840549 | None:intergenic |
| CGAATAGTTACGATGTCGTG+AGG | 0.656022 | 8.3:+10841339 | MS.gene060339:CDS |
| GATCGACCTATTGTTGGACA+AGG | 0.657502 | 8.3:-10840573 | None:intergenic |
| TGCTGGTTCAGGCATATCAG+AGG | 0.657900 | 8.3:+10835101 | MS.gene060339:CDS |
| TGCCCTCCTAATCACTACAA+TGG | 0.661991 | 8.3:+10840618 | MS.gene060339:CDS |
| ATACATCAATCATAGCTCGA+AGG | 0.662405 | 8.3:-10840130 | None:intergenic |
| GGCCATTGTAGTGATTAGGA+GGG | 0.674612 | 8.3:-10840620 | None:intergenic |
| GCAGGATTGGAGAAGTAGAG+GGG | 0.680188 | 8.3:+10834724 | MS.gene060339:CDS |
| CGGTGGATCTATGAGGACGA+CGG | 0.684535 | 8.3:+10840917 | MS.gene060339:CDS |
| ACCGGAGCTTCCGAACGCGG+AGG | 0.685121 | 8.3:-10841242 | None:intergenic |
| GCGGAGGCTCGTCAATAACA+GGG | 0.689264 | 8.3:-10841226 | None:intergenic |
| CAAGGCTCAACAGCATCAGG+AGG | 0.700522 | 8.3:-10840555 | None:intergenic |
| CTTAGAACAACAGCACACAA+CGG | 0.710603 | 8.3:+10841200 | MS.gene060339:CDS |
| TGAGGATATACAGTTAACGG+AGG | 0.725623 | 8.3:+10841415 | MS.gene060339:CDS |
| GTATGTCTAAGCGACAAATG+CGG | 0.748311 | 8.3:+10840149 | MS.gene060339:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 10834700 | 10841583 | 10834700 | ID=MS.gene060339 |
| chr8.3 | mRNA | 10834700 | 10841583 | 10834700 | ID=MS.gene060339.t1;Parent=MS.gene060339 |
| chr8.3 | exon | 10834700 | 10834900 | 10834700 | ID=MS.gene060339.t1.exon1;Parent=MS.gene060339.t1 |
| chr8.3 | CDS | 10834700 | 10834900 | 10834700 | ID=cds.MS.gene060339.t1;Parent=MS.gene060339.t1 |
| chr8.3 | exon | 10835011 | 10835188 | 10835011 | ID=MS.gene060339.t1.exon2;Parent=MS.gene060339.t1 |
| chr8.3 | CDS | 10835011 | 10835188 | 10835011 | ID=cds.MS.gene060339.t1;Parent=MS.gene060339.t1 |
| chr8.3 | exon | 10839567 | 10839829 | 10839567 | ID=MS.gene060339.t1.exon3;Parent=MS.gene060339.t1 |
| chr8.3 | CDS | 10839567 | 10839829 | 10839567 | ID=cds.MS.gene060339.t1;Parent=MS.gene060339.t1 |
| chr8.3 | exon | 10840073 | 10840342 | 10840073 | ID=MS.gene060339.t1.exon4;Parent=MS.gene060339.t1 |
| chr8.3 | CDS | 10840073 | 10840342 | 10840073 | ID=cds.MS.gene060339.t1;Parent=MS.gene060339.t1 |
| chr8.3 | exon | 10840455 | 10841583 | 10840455 | ID=MS.gene060339.t1.exon5;Parent=MS.gene060339.t1 |
| chr8.3 | CDS | 10840455 | 10841583 | 10840455 | ID=cds.MS.gene060339.t1;Parent=MS.gene060339.t1 |
| Gene Sequence |
| Protein sequence |
