AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene066099

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene066099.t1 MTR_4g107850 98.264 1037 14 3 1 1034 3 1038 0.0 2098
MS.gene066099.t1 MTR_6g028050 47.637 1079 453 21 13 1034 3 1026 0.0 958
MS.gene066099.t1 MTR_5g010390 46.161 1055 480 20 16 1034 5 1007 0.0 897
MS.gene066099.t1 MTR_6g027540 45.706 1048 497 17 13 1034 8 1009 0.0 880
MS.gene066099.t1 MTR_8g031270 43.403 1046 518 19 16 1034 5 1003 0.0 833
MS.gene066099.t1 MTR_7g092770 52.964 776 319 14 286 1034 19 775 0.0 808
MS.gene066099.t1 MTR_0305s0020 52.842 774 325 12 284 1034 18 774 0.0 803
MS.gene066099.t1 MTR_3g027150 51.415 813 328 18 271 1034 28 822 0.0 795
MS.gene066099.t1 MTR_7g076900 41.382 1085 494 25 16 1034 5 1013 0.0 793
MS.gene066099.t1 MTR_4g023460 50.948 791 336 16 277 1034 371 1142 0.0 779
MS.gene066099.t1 MTR_4g023460 42.336 137 76 2 16 152 2 135 4.51e-22 103
MS.gene066099.t1 MTR_4g066150 52.625 762 311 15 299 1034 33 770 0.0 770
MS.gene066099.t1 MTR_0291s0010 50.522 766 332 15 299 1034 49 797 0.0 753
MS.gene066099.t1 MTR_4g033215 49.673 765 334 17 299 1034 302 1044 0.0 729
MS.gene066099.t1 MTR_4g033215 36.496 137 74 4 14 147 1 127 1.81e-15 82.0
MS.gene066099.t1 MTR_4g057675 44.129 809 384 17 268 1034 1 783 0.0 613
MS.gene066099.t1 MTR_4g071870 42.892 809 360 18 268 1034 1 749 0.0 585
MS.gene066099.t1 MTR_1g015540 40.708 791 407 20 275 1028 2 767 1.00e-177 538
MS.gene066099.t1 MTR_5g096980 37.185 753 439 13 300 1034 27 763 1.49e-155 479
MS.gene066099.t1 MTR_6g028070 53.333 135 61 1 13 147 3 135 1.82e-39 146
MS.gene066099.t1 MTR_4g023250 53.077 130 59 1 904 1033 1 128 2.71e-39 142
MS.gene066099.t1 MTR_4g023230 39.344 122 59 1 821 942 49 155 1.81e-23 98.2
MS.gene066099.t1 MTR_4g023390 37.864 103 42 1 907 1009 16 96 2.09e-14 70.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene066099.t1 AT1G74720 70.037 1088 265 10 1 1034 1 1081 0.0 1546
MS.gene066099.t1 AT3G03680 45.455 1056 501 21 12 1034 4 1017 0.0 879
MS.gene066099.t1 AT4G11610 43.962 1060 494 21 16 1034 7 1007 0.0 878
MS.gene066099.t1 AT4G11610 43.856 1058 502 20 16 1034 7 1011 0.0 875
MS.gene066099.t1 AT5G17980 55.333 750 305 12 299 1034 316 1049 0.0 838
MS.gene066099.t1 AT5G17980 56.934 137 55 3 13 147 3 137 3.85e-39 158
MS.gene066099.t1 AT5G48060 44.164 1071 506 26 16 1034 6 1036 0.0 836
MS.gene066099.t1 AT1G22610 43.808 1082 494 27 14 1034 1 1029 0.0 817
MS.gene066099.t1 AT3G57880 52.781 773 326 12 284 1034 18 773 0.0 808
MS.gene066099.t1 AT3G57880 52.781 773 326 12 284 1034 18 773 0.0 808
MS.gene066099.t1 AT3G57880 52.781 773 326 12 284 1034 18 773 0.0 808
MS.gene066099.t1 AT3G57880 52.781 773 326 12 284 1034 18 773 0.0 808
MS.gene066099.t1 AT1G51570 52.632 779 321 15 284 1034 18 776 0.0 801
MS.gene066099.t1 AT5G06850 52.005 773 325 14 291 1034 39 794 0.0 782
MS.gene066099.t1 AT5G12970 50.759 790 345 14 268 1034 1 769 0.0 779
MS.gene066099.t1 AT4G11610 47.073 837 385 14 237 1034 57 874 0.0 772
MS.gene066099.t1 AT4G00700 41.304 1058 526 22 16 1034 5 1006 0.0 746
MS.gene066099.t1 AT4G00700 41.304 1058 526 22 16 1034 5 1006 0.0 746
MS.gene066099.t1 AT1G04150 49.305 791 356 16 274 1034 237 1012 0.0 718
MS.gene066099.t1 AT1G04150 42.759 145 78 2 16 160 12 151 2.29e-27 120
MS.gene066099.t1 AT4G20080 49.072 754 348 14 299 1034 39 774 0.0 701
MS.gene066099.t1 AT3G61300 47.754 779 358 18 278 1034 221 972 0.0 697
MS.gene066099.t1 AT3G61300 35.036 137 78 4 16 147 6 136 4.66e-12 70.9
MS.gene066099.t1 AT3G61720 35.019 791 430 24 299 1034 34 795 3.22e-126 404
MS.gene066099.t1 AT5G03435 36.667 780 419 24 278 1028 7 740 9.85e-126 400
MS.gene066099.t1 AT5G03435 37.801 582 305 17 278 834 7 556 8.00e-101 328
MS.gene066099.t1 AT5G44760 39.730 370 179 10 299 660 31 364 3.49e-69 239
MS.gene066099.t1 AT5G44760 30.137 146 53 1 791 936 355 451 3.87e-14 76.6

Find 311 sgRNAs with CRISPR-Local

Find 353 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTGGTAGGGTTAAGCTTTA+TGG 0.105107 8.4:-19361749 MS.gene066099:CDS
GTTTATAATGATAAGAAATT+TGG 0.150072 8.4:-19361800 MS.gene066099:CDS
GGAACTTCCTTGACCATCTT+TGG 0.198935 8.4:+19361967 None:intergenic
TCGAAACGGCTTGAAGAAAA+TGG 0.209811 8.4:-19359842 MS.gene066099:CDS
TGCAAGGGTGCAAACTGTTT+TGG 0.239098 8.4:-19359215 MS.gene066099:CDS
ATTAGAGTGAAGGTACAATT+AGG 0.242637 8.4:-19360576 MS.gene066099:CDS
ATTCTTGAACTTGGAATCTT+AGG 0.246117 8.4:-19360186 MS.gene066099:CDS
CGTTTCTGACCCGGAGAATA+TGG 0.261356 8.4:-19361846 MS.gene066099:CDS
AAAATGGTTGCTGTGGCTTT+AGG 0.266507 8.4:-19359070 MS.gene066099:CDS
GTTCCATTCCGGCGAGTCAT+TGG 0.269436 8.4:+19361010 None:intergenic
CGCCAATCTTCTCACCGTTT+GGG 0.269793 8.4:+19362021 None:intergenic
CTATTCAGTGCCTCCTAAAA+TGG 0.270464 8.4:-19359086 MS.gene066099:CDS
CCGCCAATCTTCTCACCGTT+TGG 0.293001 8.4:+19362020 None:intergenic
GAAGCTATCCGTTACGGTTC+GGG 0.294645 8.4:+19360068 None:intergenic
TAGCTCCAAACCACCTGATT+TGG 0.312359 8.4:-19359272 MS.gene066099:CDS
TACTTTACTTGGTCCTTGTT+TGG 0.312550 8.4:-19359456 MS.gene066099:CDS
CACAAGTTCATATCCATTAC+TGG 0.313298 8.4:-19359872 MS.gene066099:CDS
GCATCTGAACTCCATGCTTC+TGG 0.314338 8.4:+19360726 None:intergenic
TTTATAATGATAAGAAATTT+GGG 0.320068 8.4:-19361799 MS.gene066099:CDS
TGAAGAGGGAAGAGTTTATC+AGG 0.320697 8.4:-19361486 MS.gene066099:CDS
TGATGATGATACTGCATTTC+CGG 0.323781 8.4:+19361326 None:intergenic
TTCACCGCGAGTGGTGGTTT+TGG 0.325194 8.4:-19361420 MS.gene066099:CDS
GATCAAAGCCCGCGAGTTAT+AGG 0.327596 8.4:-19361043 MS.gene066099:CDS
GTCCCACCGCGAAATCTCTA+TGG 0.335869 8.4:-19360224 MS.gene066099:CDS
CGCTCTTCCTCCGGCGGCGG+TGG 0.336230 8.4:+19361566 None:intergenic
CCAGTTGGAATTCTTGAACT+TGG 0.337278 8.4:-19360195 MS.gene066099:CDS
TGAAGCAAAACCGTTGTAAC+TGG 0.339352 8.4:+19359481 None:intergenic
CATTGGTTCAACTAGATCAT+AGG 0.344419 8.4:+19361160 None:intergenic
CAAACCACCTGATTTGGTTC+GGG 0.345778 8.4:-19359266 MS.gene066099:CDS
TGATACTGCATTTCCGGTTC+CGG 0.346606 8.4:+19361332 None:intergenic
TCCGAATCTACCACCGTTAA+CGG 0.347466 8.4:-19360607 MS.gene066099:CDS
CCAAACCACCTGATTTGGTT+CGG 0.347773 8.4:-19359267 MS.gene066099:CDS
CTTGACCATCTTTGGGAAGA+AGG 0.353604 8.4:+19361975 None:intergenic
GACTTCCTAGTTTGTCTGAT+AGG 0.354170 8.4:-19358979 MS.gene066099:CDS
TTAGAGTGAAGGTACAATTA+GGG 0.357179 8.4:-19360575 MS.gene066099:CDS
TTCAAACTAGCCGGAGGCAT+TGG 0.363926 8.4:+19359013 None:intergenic
TCCATACCAGCTGGTATCTT+GGG 0.370566 8.4:+19359361 None:intergenic
CGAAGCTATCCGTTACGGTT+CGG 0.376428 8.4:+19360067 None:intergenic
GAACTTCCTTGACCATCTTT+GGG 0.376568 8.4:+19361968 None:intergenic
TTCTTCCCGGAGATATCTTT+CGG 0.376626 8.4:+19361212 None:intergenic
TCTTACTGTGTGGCCAAGTA+TGG 0.380462 8.4:-19360108 MS.gene066099:CDS
AATTCTTCATCTAATTCATC+TGG 0.381375 8.4:+19359307 None:intergenic
CCAGATTTAATTGTTCCAAC+CGG 0.383775 8.4:-19359430 MS.gene066099:CDS
ATCTTCGTCATCCAATGTTT+AGG 0.384224 8.4:-19359039 MS.gene066099:CDS
CGGCGAGTCATTGGGTTCGT+TGG 0.386763 8.4:+19361019 None:intergenic
TGTGGAGCAAGAGGACTATC+TGG 0.387121 8.4:+19360852 None:intergenic
GCCGAGTAACGCCGCTTCCT+TGG 0.390755 8.4:+19360419 None:intergenic
ATCCATACCAGCTGGTATCT+TGG 0.392091 8.4:+19359360 None:intergenic
CTAATCTCCGGCGCCGTTAA+CGG 0.392366 8.4:+19360594 None:intergenic
GCCAAATGGTTCCCGTTAGA+AGG 0.393717 8.4:-19360339 MS.gene066099:CDS
TTAAAGAACTCAACCCGGTT+TGG 0.395255 8.4:-19361889 MS.gene066099:CDS
TACGTTGGAGATTTCCGTTT+GGG 0.396619 8.4:-19360943 MS.gene066099:CDS
GCGACATACAACTTTCCGTT+TGG 0.398418 8.4:-19360776 MS.gene066099:CDS
TCCACTTGGTGTGGCCCAAC+AGG 0.398673 8.4:-19359719 MS.gene066099:CDS
TTCCATTCCGGCGAGTCATT+GGG 0.402135 8.4:+19361011 None:intergenic
GTAGATTCGGAGTTAGATTC+AGG 0.403572 8.4:+19360619 None:intergenic
CCGGGTTGAGTTCTTTAAAC+CGG 0.406215 8.4:+19361894 None:intergenic
CCGGTTGGAACAATTAAATC+TGG 0.406243 8.4:+19359430 None:intergenic
TTTATCAATCACCGAAGCTT+TGG 0.407372 8.4:-19360674 MS.gene066099:CDS
AGAGCTACAAAATTGTTCAT+TGG 0.408099 8.4:-19359136 MS.gene066099:CDS
TCACCATTACCGTTACCATT+AGG 0.411334 8.4:+19361242 None:intergenic
CCGAACCAAATCAGGTGGTT+TGG 0.414261 8.4:+19359267 None:intergenic
GGGTTCAAGCATTGGTTAGT+TGG 0.416297 8.4:-19359168 MS.gene066099:CDS
GAATTGTGGCAGTGTTAGCT+TGG 0.418307 8.4:-19359552 MS.gene066099:CDS
GGCGAGTCATTGGGTTCGTT+GGG 0.418426 8.4:+19361020 None:intergenic
TTTGCTTCATATACTTTACT+TGG 0.418669 8.4:-19359467 MS.gene066099:CDS
CACCTACGCCTCTGTTTAGA+AGG 0.419906 8.4:-19360294 MS.gene066099:CDS
GCGGTTCGGTTCGCTTGCCC+CGG 0.422998 8.4:-19359805 MS.gene066099:CDS
GGCTCGCTCAGAGCCTCCGA+TGG 0.423198 8.4:-19359653 MS.gene066099:CDS
CCGTAGGTGTATTTGACAAC+TGG 0.423400 8.4:-19359987 MS.gene066099:CDS
AGGTTCTAACCTTCACGAAC+GGG 0.423882 8.4:+19361081 None:intergenic
AAATCCAAGGGTCCAGGAAA+AGG 0.425305 8.4:-19360141 MS.gene066099:CDS
ACCTTCTAACGGGAACCATT+TGG 0.426014 8.4:+19360338 None:intergenic
TTGTAGAGGTGAAGAAGCTT+TGG 0.428883 8.4:-19361714 MS.gene066099:CDS
TAACGAACCCGAACCAAATC+AGG 0.429394 8.4:+19359259 None:intergenic
TCGAAGTCCGCCACCACGTA+AGG 0.430336 8.4:+19361941 None:intergenic
CGCGGTGAAGGAGGACCGTC+AGG 0.430588 8.4:+19361434 None:intergenic
TCAAGCAACTCGTTCCAAAC+CGG 0.432570 8.4:+19361875 None:intergenic
GCCGTTAACGGTGGTAGATT+CGG 0.433227 8.4:+19360606 None:intergenic
GTTTGAAGAGCTTGAAGTTG+AGG 0.433946 8.4:-19361822 MS.gene066099:CDS
CCCCGCGTAAAGCCTCCTGT+TGG 0.434637 8.4:+19359704 None:intergenic
GCGGGAGATGTACGCTCAAC+CGG 0.439542 8.4:-19361351 MS.gene066099:CDS
CCACTGAGCTACCATCTTAG+TGG 0.440567 8.4:+19359678 None:intergenic
GTTAGAATCGTGAAGGTTCG+CGG 0.443339 8.4:-19361125 MS.gene066099:CDS
CTACGTTGGAGATTTCCGTT+TGG 0.447066 8.4:-19360944 MS.gene066099:CDS
TGCCACAATTCTAAACCAAT+TGG 0.447859 8.4:+19359564 None:intergenic
TTCACCGTTAGGTTTCTTCC+CGG 0.449009 8.4:+19361199 None:intergenic
AGTTGGATTAGAGGTGAAAT+CGG 0.452238 8.4:-19361659 MS.gene066099:CDS
GCAGTGTTAGCTTGGGCTGT+TGG 0.454236 8.4:-19359544 MS.gene066099:CDS
GCTCGCTCAGAGCCTCCGAT+GGG 0.455368 8.4:-19359652 MS.gene066099:CDS
TGGGGCGGTCCTTGTTGAAA+CGG 0.456111 8.4:+19362040 None:intergenic
GATGTACGCTCAACCGGAAC+CGG 0.457522 8.4:-19361345 MS.gene066099:CDS
CAGTCACAGGCATCCGATGA+TGG 0.462725 8.4:-19361510 MS.gene066099:CDS
AAATCAGGTGGTTTGGAGCT+AGG 0.462960 8.4:+19359274 None:intergenic
TCAAACTAGCCGGAGGCATT+GGG 0.463156 8.4:+19359014 None:intergenic
CCCGCGTAAAGCCTCCTGTT+GGG 0.464475 8.4:+19359705 None:intergenic
TCAACAAGATCCACCGTTGC+GGG 0.465205 8.4:-19361369 MS.gene066099:CDS
ACCCAAGATACCAGCTGGTA+TGG 0.466006 8.4:-19359362 MS.gene066099:CDS
TGATAAACCGCACATGTGTC+AGG 0.466189 8.4:+19359775 None:intergenic
GTCCGCCACCACGTAAGGGC+TGG 0.472594 8.4:+19361946 None:intergenic
AGCCAATTGGTTTAGAATTG+TGG 0.473301 8.4:-19359566 MS.gene066099:CDS
GCAAGAACAACCACCGCCGC+CGG 0.473843 8.4:-19361576 MS.gene066099:CDS
CAAAACGCCGGTAGAGTCTC+CGG 0.474134 8.4:-19360798 MS.gene066099:CDS
ATCCTCTCAGATTCACCGTT+AGG 0.477236 8.4:+19361188 None:intergenic
TGAGGAAAAGTAAAGCCAAT+TGG 0.477748 8.4:-19359579 MS.gene066099:CDS
TGCCGCTCTTCCTCCGGCGG+CGG 0.477763 8.4:+19361563 None:intergenic
AAGATTATGAAGAGACCTAA+TGG 0.478269 8.4:-19361257 MS.gene066099:CDS
ACGAACGGGCTTTCAGTTGG+AGG 0.481142 8.4:+19361095 None:intergenic
CGGGTTGAGTTCTTTAAACC+GGG 0.481919 8.4:+19361895 None:intergenic
CTGGTATCTTGGGTCTAAAA+CGG 0.482340 8.4:+19359371 None:intergenic
TTTGGAAGAATCACCTTCTC+CGG 0.482881 8.4:-19361402 MS.gene066099:CDS
AATTGTGGCAGTGTTAGCTT+GGG 0.483059 8.4:-19359551 MS.gene066099:CDS
CGCAACCTTCTTCCCAAAGA+TGG 0.483543 8.4:-19361980 MS.gene066099:CDS
ACCAAGGAAGCGGCGTTACT+CGG 0.483659 8.4:-19360420 MS.gene066099:CDS
TTATGACAGGTTAAGAATGT+TGG 0.484006 8.4:-19359239 MS.gene066099:CDS
AAGAAATTTGGGAATGGTAG+TGG 0.487221 8.4:-19361788 MS.gene066099:CDS
CTATCTGGAGAATCACGAAT+AGG 0.489424 8.4:+19360867 None:intergenic
CTGGCGTATGTTTGCTGATG+TGG 0.491272 8.4:-19359968 MS.gene066099:CDS
AGTAGGACCCACCTTCTAAC+GGG 0.492134 8.4:+19360328 None:intergenic
ACTCACATGCTTGGAGTATG+AGG 0.492503 8.4:-19359597 MS.gene066099:CDS
CCACCGTGCCGCTCTTCCTC+CGG 0.492946 8.4:+19361557 None:intergenic
CCAAGTTCAAGAATTCCAAC+TGG 0.494458 8.4:+19360195 None:intergenic
GCCCCAAACGGTGAGAAGAT+TGG 0.495143 8.4:-19362023 MS.gene066099:CDS
TCTTCAAACTCCATATTCTC+CGG 0.496145 8.4:+19361836 None:intergenic
TACAGCAAAACCGATGCAAC+CGG 0.497708 8.4:-19360969 MS.gene066099:CDS
CGAAACGGCTTGAAGAAAAT+GGG 0.497923 8.4:-19359841 MS.gene066099:CDS
TCACCTACAGAGCAATTTCT+CGG 0.498901 8.4:-19360918 MS.gene066099:CDS
CCTGGACCCTTGGATTTCAT+CGG 0.499593 8.4:+19360147 None:intergenic
GGCATTGGGTTCCTAAACAT+TGG 0.499655 8.4:+19359028 None:intergenic
CACCGCCGCCGGAGGAAGAG+CGG 0.500632 8.4:-19361565 MS.gene066099:CDS
AGACCTAATGGTAACGGTAA+TGG 0.501527 8.4:-19361245 MS.gene066099:CDS
ACCGCCACGTGCCAGCCAAA+TGG 0.504191 8.4:-19360353 MS.gene066099:CDS
TTCACGAACGGGCTTTCAGT+TGG 0.506939 8.4:+19361092 None:intergenic
TGAGTTCATCGTTTCTGACC+CGG 0.506939 8.4:-19361855 MS.gene066099:CDS
GTTAAGAATGTTGGCTGCAA+GGG 0.506997 8.4:-19359230 MS.gene066099:CDS
CGGTTCGGTTCGCTTGCCCC+GGG 0.508247 8.4:-19359804 MS.gene066099:CDS
TTACTGGTTCTGACTCGAAA+CGG 0.508290 8.4:-19359856 MS.gene066099:CDS
GGGCTGTTGGATTAGCTAAG+TGG 0.510508 8.4:-19359531 MS.gene066099:CDS
CTTCGGTGATTGATAAACCT+TGG 0.511460 8.4:+19360680 None:intergenic
GAGTTCTTTAAACCGGGTGG+TGG 0.513084 8.4:+19361901 None:intergenic
ATCTAATTCATCTGGATCAA+CGG 0.513102 8.4:+19359315 None:intergenic
AATCCAAGGGTCCAGGAAAA+GGG 0.514447 8.4:-19360140 MS.gene066099:CDS
AGGTGAGAGGGTTCAAGCAT+TGG 0.514905 8.4:-19359176 MS.gene066099:CDS
AACCCAATGACTCGCCGGAA+TGG 0.515956 8.4:-19361013 MS.gene066099:CDS
GAGTAACGCCGCTTCCTTGG+TGG 0.517547 8.4:+19360422 None:intergenic
AGTTTATCAGGTTGAACAGA+TGG 0.517807 8.4:-19361474 MS.gene066099:CDS
CAGATTTAATTGTTCCAACC+GGG 0.519192 8.4:-19359429 MS.gene066099:CDS
CTCTGTAGGTGAATCCCAAA+CGG 0.519575 8.4:+19360929 None:intergenic
GTTTAGGAACCCAATGCCTC+CGG 0.524667 8.4:-19359023 MS.gene066099:CDS
TGCTTCTGGAAAAGCGTCGT+CGG 0.525056 8.4:+19360740 None:intergenic
TTCCAGCCCTTACGTGGTGG+CGG 0.525448 8.4:-19361948 MS.gene066099:CDS
TCCTCCTTCACCGCGAGTGG+TGG 0.527371 8.4:-19361426 MS.gene066099:CDS
TGGTTCGGGTTCGTTATGAC+AGG 0.530679 8.4:-19359252 MS.gene066099:CDS
CAACGTAGCACCGGTTGCAT+CGG 0.530953 8.4:+19360959 None:intergenic
TTAGAATCGTGAAGGTTCGC+GGG 0.531801 8.4:-19361124 MS.gene066099:CDS
ACTTGGTGTGGCCCAACAGG+AGG 0.534698 8.4:-19359716 MS.gene066099:CDS
TGATCTGACGTAGTGACTTG+AGG 0.535682 8.4:+19361061 None:intergenic
CAAGCAACTCGTTCCAAACC+GGG 0.536644 8.4:+19361876 None:intergenic
ACTCTCAGATACCAAAGCTT+CGG 0.537168 8.4:+19360663 None:intergenic
TGGATGCTGACTCACATGCT+TGG 0.537691 8.4:-19359606 MS.gene066099:CDS
ATTGGTTCAACTAGATCATA+GGG 0.538697 8.4:+19361161 None:intergenic
TCAACAAGGACCGCCCCAAA+CGG 0.540444 8.4:-19362035 MS.gene066099:CDS
GAAGGAGGACCGTCAGGAAG+TGG 0.540621 8.4:+19361440 None:intergenic
CCGATGAAATCCAAGGGTCC+AGG 0.541851 8.4:-19360147 MS.gene066099:CDS
CCGCCGAGAAATTGCTCTGT+AGG 0.542679 8.4:+19360915 None:intergenic
ACCACAGCATGTCGTTTCAC+TGG 0.543586 8.4:-19360515 MS.gene066099:CDS
GCCTCCTAAAATGGTTGCTG+TGG 0.544475 8.4:-19359077 MS.gene066099:CDS
CTTGGAATCTTAGGCGCTCG+TGG 0.546490 8.4:-19360177 MS.gene066099:CDS
ACGGTGGCGCAGAGCAAGAG+AGG 0.547631 8.4:-19361541 MS.gene066099:CDS
TCTTGTTGAACACGAACTAC+CGG 0.547815 8.4:+19361383 None:intergenic
AGGTTTCCATAGAGATTTCG+CGG 0.548210 8.4:+19360218 None:intergenic
AACGGTGAGAAGATTGGCGG+TGG 0.548470 8.4:-19362017 MS.gene066099:CDS
CTTCCCTCTTCACCCATCAT+CGG 0.549244 8.4:+19361497 None:intergenic
TTCGTTGGGCCTATAACTCG+CGG 0.549831 8.4:+19361034 None:intergenic
TACGCGCCGAAAGATATCTC+CGG 0.550302 8.4:-19361218 MS.gene066099:CDS
GCCCAACAGGAGGCTTTACG+CGG 0.551222 8.4:-19359706 MS.gene066099:CDS
CTTCTAAACAGAGGCGTAGG+TGG 0.551291 8.4:+19360295 None:intergenic
TCTCTATGGAAACCTCCAGT+TGG 0.551296 8.4:-19360210 MS.gene066099:CDS
GGTTAAGAATGTTGGCTGCA+AGG 0.551608 8.4:-19359231 MS.gene066099:CDS
CGAGGTTGTTCGATACATGT+TGG 0.551957 8.4:-19359626 MS.gene066099:CDS
CTTCAAACTCCATATTCTCC+GGG 0.552338 8.4:+19361837 None:intergenic
TTTCGAGTCAGAACCAGTAA+TGG 0.553602 8.4:+19359859 None:intergenic
ATGCACTACATTCGTCCACT+TGG 0.553610 8.4:-19359733 MS.gene066099:CDS
AGAACAACCACCGCCGCCGG+AGG 0.554031 8.4:-19361573 MS.gene066099:CDS
AACGGAAAGTTGTATGTCGC+CGG 0.556257 8.4:+19360779 None:intergenic
CGGTCCTCCTTCACCGCGAG+TGG 0.556306 8.4:-19361429 MS.gene066099:CDS
GCCAATCTTCTCACCGTTTG+GGG 0.556670 8.4:+19362022 None:intergenic
GGTTAGATGATATAAGAAGA+TGG 0.557390 8.4:-19359510 MS.gene066099:CDS
AATGATAAGAAATTTGGGAA+TGG 0.559099 8.4:-19361794 MS.gene066099:CDS
CATCCGATGATGGGTGAAGA+GGG 0.559487 8.4:-19361500 MS.gene066099:CDS
GAGGTTCTAACCTTCACGAA+CGG 0.559610 8.4:+19361080 None:intergenic
CGATGCAACCGGTGCTACGT+TGG 0.560184 8.4:-19360958 MS.gene066099:CDS
AAAACCACCACTCGCGGTGA+AGG 0.560550 8.4:+19361422 None:intergenic
TCCTGTTGGGCCACACCAAG+TGG 0.560701 8.4:+19359718 None:intergenic
ACGCGCCGAAAGATATCTCC+GGG 0.561337 8.4:-19361217 MS.gene066099:CDS
AGATCGCACCACCAAGGAAG+CGG 0.562726 8.4:-19360430 MS.gene066099:CDS
GAAGATCTTCTCTTCGTCGC+CGG 0.563391 8.4:-19360489 MS.gene066099:CDS
CGAACAACCTCGTGCCCCAT+CGG 0.563726 8.4:+19359637 None:intergenic
GCATCCGATGATGGGTGAAG+AGG 0.563834 8.4:-19361501 MS.gene066099:CDS
AGAGGAACAATCACAGTCAC+AGG 0.565907 8.4:-19361523 MS.gene066099:CDS
GGTCAGAACCCGAACCGTAA+CGG 0.565952 8.4:-19360076 MS.gene066099:CDS
GAGCGAGTGTGTGCCACGTA+TGG 0.566668 8.4:+19360702 None:intergenic
TTCCATAGAGATTTCGCGGT+GGG 0.569256 8.4:+19360222 None:intergenic
TGTACTGTTCGTTCCACCGT+GGG 0.569348 8.4:+19360043 None:intergenic
TCGTTGGGCCTATAACTCGC+GGG 0.569538 8.4:+19361035 None:intergenic
AGTCACAGGCATCCGATGAT+GGG 0.570113 8.4:-19361509 MS.gene066099:CDS
CCTTGCACTGTCTTAACCGT+AGG 0.571276 8.4:-19360003 MS.gene066099:CDS
TTTAGACCCAAGATACCAGC+TGG 0.572276 8.4:-19359367 MS.gene066099:CDS
CAGTAGGACCCACCTTCTAA+CGG 0.572682 8.4:+19360327 None:intergenic
TCTACCACCGTTAACGGCGC+CGG 0.574432 8.4:-19360601 MS.gene066099:CDS
TCTAACGGGAACCATTTGGC+TGG 0.574894 8.4:+19360342 None:intergenic
AAATGGTTCCCGTTAGAAGG+TGG 0.575886 8.4:-19360336 MS.gene066099:CDS
ATACAACTTTCCGTTTGGAT+CGG 0.577068 8.4:-19360771 MS.gene066099:CDS
AACTGAAAGCCCGTTCGTGA+AGG 0.577259 8.4:-19361090 MS.gene066099:CDS
TTAGAAGGTGGGTCCTACTG+TGG 0.577831 8.4:-19360324 MS.gene066099:CDS
TAAGATGGTAGCTCAGTGGC+TGG 0.577993 8.4:-19359674 MS.gene066099:CDS
TGACTCGCCGGAATGGAACC+AGG 0.578461 8.4:-19361006 MS.gene066099:CDS
CTAACAAACAGATACTGCAT+TGG 0.578943 8.4:+19361143 None:intergenic
TGTACCTTCACTCTAATCTC+CGG 0.580661 8.4:+19360582 None:intergenic
ACCACCACTCGCGGTGAAGG+AGG 0.581513 8.4:+19361425 None:intergenic
CCCAACAGGAGGCTTTACGC+GGG 0.582876 8.4:-19359705 MS.gene066099:CDS
TACGTGGTGGCGGACTTCGA+CGG 0.582930 8.4:-19361938 MS.gene066099:CDS
CAACGAACCCAATGACTCGC+CGG 0.583064 8.4:-19361018 MS.gene066099:CDS
CGGTACCATTGTGGAGCAAG+AGG 0.584297 8.4:+19360843 None:intergenic
AATGGGTGAAATCGAGTTAG+CGG 0.585887 8.4:-19359824 MS.gene066099:CDS
CGCTGTTCGATTGACGTCAG+AGG 0.586187 8.4:+19360384 None:intergenic
CGAAGTCCGCCACCACGTAA+GGG 0.586229 8.4:+19361942 None:intergenic
TATGTCGCCGGAGACTCTAC+CGG 0.586518 8.4:+19360791 None:intergenic
AATCTTGTATCCATACCAGC+TGG 0.589612 8.4:+19359352 None:intergenic
TCTGTTTGTTAGAATCGTGA+AGG 0.590343 8.4:-19361132 MS.gene066099:CDS
CGTGGCACACACTCGCTCCA+AGG 0.590638 8.4:-19360697 MS.gene066099:CDS
TGAACACGAACTACCGGAGA+AGG 0.591102 8.4:+19361389 None:intergenic
CAATCACAGAGAACAAGAAG+AGG 0.591111 8.4:-19360549 MS.gene066099:CDS
AATCTTCTCACCGTTTGGGG+CGG 0.592507 8.4:+19362025 None:intergenic
AGAGCCTCCGATGGGGCACG+AGG 0.594720 8.4:-19359644 MS.gene066099:CDS
CTACATTCGTCCACTTGGTG+TGG 0.594829 8.4:-19359728 MS.gene066099:CDS
CCGGTTTAAAGAACTCAACC+CGG 0.594943 8.4:-19361894 MS.gene066099:CDS
GGAAATCTCCAACGTAGCAC+CGG 0.596844 8.4:+19360950 None:intergenic
GGAATCTTCTAGTGGCTCAC+CGG 0.597195 8.4:+19360470 None:intergenic
CTCGCTCAGAGCCTCCGATG+GGG 0.597618 8.4:-19359651 MS.gene066099:CDS
TTATCACGTGCTTGATGAAG+CGG 0.601621 8.4:-19360268 MS.gene066099:CDS
TTCAACAAGATCCACCGTTG+CGG 0.602303 8.4:-19361370 MS.gene066099:CDS
ATCAACCTATCAGACAAACT+AGG 0.603071 8.4:+19358974 None:intergenic
ATCTTCTACGAGAAGGACCA+TGG 0.603592 8.4:+19360449 None:intergenic
TAGAAGGTGGGTCCTACTGT+GGG 0.603855 8.4:-19360323 MS.gene066099:CDS
CCACAATGGTACCGTCTCGA+AGG 0.605104 8.4:-19360834 MS.gene066099:CDS
GTGAAATCGAGTTAGCGGTT+CGG 0.605145 8.4:-19359819 MS.gene066099:CDS
ATGAAGAGACCTAATGGTAA+CGG 0.606071 8.4:-19361251 MS.gene066099:CDS
ACGCGGGGCAGCCACTAAGA+TGG 0.606291 8.4:-19359689 MS.gene066099:CDS
ACAACCTCGTGCCCCATCGG+AGG 0.608544 8.4:+19359640 None:intergenic
AATGGTTCCCGTTAGAAGGT+GGG 0.608687 8.4:-19360335 MS.gene066099:CDS
AGTTCAAGAATTCCAACTGG+AGG 0.611937 8.4:+19360198 None:intergenic
CCAAACGGTGAGAAGATTGG+CGG 0.612320 8.4:-19362020 MS.gene066099:CDS
TGGGTCGAAGCTATCCGTTA+CGG 0.615070 8.4:+19360062 None:intergenic
ACCATTTGGCTGGCACGTGG+CGG 0.615125 8.4:+19360352 None:intergenic
CCTTCGAGACGGTACCATTG+TGG 0.615235 8.4:+19360834 None:intergenic
CTACGCCTCTGTTTAGAAGG+TGG 0.615741 8.4:-19360291 MS.gene066099:CDS
GGCCACACAGTAAGAATCAG+TGG 0.616175 8.4:+19360116 None:intergenic
TGAGCCACTAGAAGATTCCA+TGG 0.617345 8.4:-19360466 MS.gene066099:CDS
AGAGAAAACGAACCACCACC+CGG 0.617915 8.4:-19361913 MS.gene066099:CDS
CTGCTGCGCCACCTTCGAGA+CGG 0.618995 8.4:+19360823 None:intergenic
CCGCCGGAGGAAGAGCGGCA+CGG 0.619495 8.4:-19361560 MS.gene066099:CDS
CAATGGTACCGTCTCGAAGG+TGG 0.621124 8.4:-19360831 MS.gene066099:CDS
TGGTGCGATCTTCTACGAGA+AGG 0.622059 8.4:+19360442 None:intergenic
GAACGAACAGTACACATGGC+AGG 0.622431 8.4:-19360034 MS.gene066099:CDS
CTTCTTCCCAAAGATGGTCA+AGG 0.623665 8.4:-19361974 MS.gene066099:CDS
AGGAAGTTCCAGCCCTTACG+TGG 0.623834 8.4:-19361954 MS.gene066099:CDS
TAACGGATAGCTTCGACCCA+CGG 0.625339 8.4:-19360059 MS.gene066099:CDS
CATTGTGTGCCACTTCCTGA+CGG 0.625959 8.4:-19361449 MS.gene066099:CDS
TCTTCTTCCGATGAAATCCA+AGG 0.627021 8.4:-19360154 MS.gene066099:CDS
CTTCTTCCGATGAAATCCAA+GGG 0.628802 8.4:-19360153 MS.gene066099:CDS
GGAACCATTTGGCTGGCACG+TGG 0.629535 8.4:+19360349 None:intergenic
TGAGCGTACATCTCCCGCAA+CGG 0.631429 8.4:+19361356 None:intergenic
GGCGCCGGAGATTAGAGTGA+AGG 0.631671 8.4:-19360586 MS.gene066099:CDS
GTATCTGAGAGTAACAGTCA+TGG 0.631794 8.4:-19360652 MS.gene066099:CDS
TAGGTGGACTCTCCCACAGT+AGG 0.634184 8.4:+19360311 None:intergenic
GTTGAGTTCTTTAAACCGGG+TGG 0.635261 8.4:+19361898 None:intergenic
CCAGTTGTCAAATACACCTA+CGG 0.635674 8.4:+19359987 None:intergenic
CCTACGGTTAAGACAGTGCA+AGG 0.636191 8.4:+19360003 None:intergenic
ATCTCCGGCGCCGTTAACGG+TGG 0.640916 8.4:+19360597 None:intergenic
ATCATCATCATCCTGACGTG+AGG 0.641393 8.4:-19361310 MS.gene066099:CDS
TCTTCCAAAACCACCACTCG+CGG 0.641790 8.4:+19361416 None:intergenic
GCCAGTGAAACGACATGCTG+TGG 0.643248 8.4:+19360514 None:intergenic
AACCTAACGGTGAATCTGAG+AGG 0.643417 8.4:-19361190 MS.gene066099:CDS
GCGTACATCTCCCGCAACGG+TGG 0.645515 8.4:+19361359 None:intergenic
CCAACAGGAGGCTTTACGCG+GGG 0.647836 8.4:-19359704 MS.gene066099:CDS
GCAACGACGCCGTTTCAACA+AGG 0.650190 8.4:-19362049 MS.gene066099:CDS
CCGTGCCGCTCTTCCTCCGG+CGG 0.652794 8.4:+19361560 None:intergenic
GTGTACTGTTCGTTCCACCG+TGG 0.657085 8.4:+19360042 None:intergenic
AAGTTCCAGCCCTTACGTGG+TGG 0.659152 8.4:-19361951 MS.gene066099:CDS
AGTGAAACGACATGCTGTGG+TGG 0.659402 8.4:+19360517 None:intergenic
GAGTTCAGATGCACCATACG+TGG 0.662296 8.4:-19360715 MS.gene066099:CDS
ATAGTCCTCTTGCTCCACAA+TGG 0.663046 8.4:-19360848 MS.gene066099:CDS
AGGACCATGGAATCTTCTAG+TGG 0.663292 8.4:+19360462 None:intergenic
CCGGAGGAAGAGCGGCACGG+TGG 0.663473 8.4:-19361557 MS.gene066099:CDS
ATCTCCGGGAAGAAACCTAA+CGG 0.664237 8.4:-19361203 MS.gene066099:CDS
GTCCACTGATTCTTACTGTG+TGG 0.665645 8.4:-19360118 MS.gene066099:CDS
CACCTTCTAAACAGAGGCGT+AGG 0.667135 8.4:+19360292 None:intergenic
CGTAGAAGATCGCACCACCA+AGG 0.672290 8.4:-19360436 MS.gene066099:CDS
CGGATAGCTTCGACCCACGG+TGG 0.684725 8.4:-19360056 MS.gene066099:CDS
TGAGGAAAATGCAAACAATG+AGG 0.684870 8.4:-19361292 MS.gene066099:CDS
GGCGCAGCAGAACAAAACGC+CGG 0.688834 8.4:-19360810 MS.gene066099:CDS
GGATTGAGTTCCGATCCAAA+CGG 0.689297 8.4:+19360761 None:intergenic
CGAACCCGAACCAAATCAGG+TGG 0.692684 8.4:+19359262 None:intergenic
CCACTAAGATGGTAGCTCAG+TGG 0.696907 8.4:-19359678 MS.gene066099:CDS
TTAAATCTGGATACCAAACA+AGG 0.703911 8.4:+19359443 None:intergenic
GGTGGAACGAACAGTACACA+TGG 0.706630 8.4:-19360038 MS.gene066099:CDS
CCTACAGAGCAATTTCTCGG+CGG 0.742223 8.4:-19360915 MS.gene066099:CDS
GATAACCACCTTCTAAACAG+AGG 0.746597 8.4:+19360286 None:intergenic
ACGTCAGAGGAATGACGACG+TGG 0.747345 8.4:+19360397 None:intergenic
TTTCCATAGAGATTTCGCGG+TGG 0.768966 8.4:+19360221 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTATAATGATAAGAAATTT+GGG - chr8.4:19359223-19359242 MS.gene066099:CDS 10.0%
!! GTTTATAATGATAAGAAATT+TGG - chr8.4:19359222-19359241 MS.gene066099:CDS 15.0%
!!! TTTTTATATGTTGTTTTGAT+TGG - chr8.4:19361616-19361635 MS.gene066099:CDS 15.0%
! AATGATAAGAAATTTGGGAA+TGG - chr8.4:19359228-19359247 MS.gene066099:CDS 25.0%
! AATTCTTCATCTAATTCATC+TGG + chr8.4:19361718-19361737 None:intergenic 25.0%
! CAAAACAACATATAAAAACC+CGG + chr8.4:19361614-19361633 None:intergenic 25.0%
! TTTGCTTCATATACTTTACT+TGG - chr8.4:19361555-19361574 MS.gene066099:CDS 25.0%
!! GTATACGAATTTTACCTATA+CGG + chr8.4:19361099-19361118 None:intergenic 25.0%
!!! ATGTTGTTTTGATTGGAATA+TGG - chr8.4:19361623-19361642 MS.gene066099:CDS 25.0%
AAGATTATGAAGAGACCTAA+TGG - chr8.4:19359765-19359784 MS.gene066099:CDS 30.0%
AGAGCTACAAAATTGTTCAT+TGG - chr8.4:19361886-19361905 MS.gene066099:CDS 30.0%
ATCTAATTCATCTGGATCAA+CGG + chr8.4:19361710-19361729 None:intergenic 30.0%
ATGGAAAAATCCAGTTACAA+CGG - chr8.4:19361531-19361550 MS.gene066099:CDS 30.0%
ATTCTTGAACTTGGAATCTT+AGG - chr8.4:19360836-19360855 MS.gene066099:CDS 30.0%
GGTTAGATGATATAAGAAGA+TGG - chr8.4:19361512-19361531 MS.gene066099:CDS 30.0%
TTAAATCTGGATACCAAACA+AGG + chr8.4:19361582-19361601 None:intergenic 30.0%
TTATGACAGGTTAAGAATGT+TGG - chr8.4:19361783-19361802 MS.gene066099:CDS 30.0%
! ATGAACAATTTTGTAGCTCT+TGG + chr8.4:19361886-19361905 None:intergenic 30.0%
! ATTAGAGTGAAGGTACAATT+AGG - chr8.4:19360446-19360465 MS.gene066099:CDS 30.0%
! ATTGGTTCAACTAGATCATA+GGG + chr8.4:19359864-19359883 None:intergenic 30.0%
! CAAGAATCATTTTCTTGGTA+GGG - chr8.4:19359260-19359279 MS.gene066099:CDS 30.0%
! TGAACAATTTTGTAGCTCTT+GGG + chr8.4:19361885-19361904 None:intergenic 30.0%
! TTAGAGTGAAGGTACAATTA+GGG - chr8.4:19360447-19360466 MS.gene066099:CDS 30.0%
!! TAGTGCATTTTTGGAAGTAA+TGG + chr8.4:19361277-19361296 None:intergenic 30.0%
!!! AGAAGAAAAGTGTTTTCAGT+TGG - chr8.4:19359346-19359365 MS.gene066099:CDS 30.0%
AAGAAATTTGGGAATGGTAG+TGG - chr8.4:19359234-19359253 MS.gene066099:CDS 35.0%
ACAACATATAAAAACCCGGT+TGG + chr8.4:19361610-19361629 None:intergenic 35.0%
ATACAACTTTCCGTTTGGAT+CGG - chr8.4:19360251-19360270 MS.gene066099:CDS 35.0%
ATCAACCTATCAGACAAACT+AGG + chr8.4:19362051-19362070 None:intergenic 35.0%
ATCTTCGTCATCCAATGTTT+AGG - chr8.4:19361983-19362002 MS.gene066099:CDS 35.0%
ATGAAGAGACCTAATGGTAA+CGG - chr8.4:19359771-19359790 MS.gene066099:CDS 35.0%
CACAAGTTCATATCCATTAC+TGG - chr8.4:19361150-19361169 MS.gene066099:CDS 35.0%
CAGATTTAATTGTTCCAACC+GGG - chr8.4:19361593-19361612 MS.gene066099:CDS 35.0%
CCAGATTTAATTGTTCCAAC+CGG - chr8.4:19361592-19361611 MS.gene066099:CDS 35.0%
CTAACAAACAGATACTGCAT+TGG + chr8.4:19359882-19359901 None:intergenic 35.0%
CTGAAAAAGTTCAAACTAGC+CGG + chr8.4:19362021-19362040 None:intergenic 35.0%
TACTTTACTTGGTCCTTGTT+TGG - chr8.4:19361566-19361585 MS.gene066099:CDS 35.0%
TCTTCAAACTCCATATTCTC+CGG + chr8.4:19359189-19359208 None:intergenic 35.0%
TGAGGAAAAGTAAAGCCAAT+TGG - chr8.4:19361443-19361462 MS.gene066099:CDS 35.0%
TGAGGAAAATGCAAACAATG+AGG - chr8.4:19359730-19359749 MS.gene066099:CDS 35.0%
TGCCACAATTCTAAACCAAT+TGG + chr8.4:19361461-19361480 None:intergenic 35.0%
TTTATCAATCACCGAAGCTT+TGG - chr8.4:19360348-19360367 MS.gene066099:CDS 35.0%
! AGCCAATTGGTTTAGAATTG+TGG - chr8.4:19361456-19361475 MS.gene066099:CDS 35.0%
! AGTTGGATTAGAGGTGAAAT+CGG - chr8.4:19359363-19359382 MS.gene066099:CDS 35.0%
! ATTTTACCTATACGGCAATC+TGG + chr8.4:19361091-19361110 None:intergenic 35.0%
! GCAAGAATCATTTTCTTGGT+AGG - chr8.4:19359259-19359278 MS.gene066099:CDS 35.0%
! TCTGTTTGTTAGAATCGTGA+AGG - chr8.4:19359890-19359909 MS.gene066099:CDS 35.0%
! TGATGATGATACTGCATTTC+CGG + chr8.4:19359699-19359718 None:intergenic 35.0%
!! AGTGTTTTCAGTTGGATTAG+AGG - chr8.4:19359354-19359373 MS.gene066099:CDS 35.0%
!! AGTTTATCAGGTTGAACAGA+TGG - chr8.4:19359548-19359567 MS.gene066099:CDS 35.0%
!! CATTGGTTCAACTAGATCAT+AGG + chr8.4:19359865-19359884 None:intergenic 35.0%
AAAAAGTTCAAACTAGCCGG+AGG + chr8.4:19362018-19362037 None:intergenic 40.0%
AAAATGGTTGCTGTGGCTTT+AGG - chr8.4:19361952-19361971 MS.gene066099:CDS 40.0%
AATCTTGTATCCATACCAGC+TGG + chr8.4:19361673-19361692 None:intergenic 40.0%
AATGGGTGAAATCGAGTTAG+CGG - chr8.4:19361198-19361217 MS.gene066099:CDS 40.0%
ACATGTGTCAGGAAAAAACC+CGG + chr8.4:19361239-19361258 None:intergenic 40.0%
ACTCTCAGATACCAAAGCTT+CGG + chr8.4:19360362-19360381 None:intergenic 40.0%
AGGTTTCCATAGAGATTTCG+CGG + chr8.4:19360807-19360826 None:intergenic 40.0%
AGTTCAAGAATTCCAACTGG+AGG + chr8.4:19360827-19360846 None:intergenic 40.0%
CAATCACAGAGAACAAGAAG+AGG - chr8.4:19360473-19360492 MS.gene066099:CDS 40.0%
CCAAGTTCAAGAATTCCAAC+TGG + chr8.4:19360830-19360849 None:intergenic 40.0%
CCAGTTGGAATTCTTGAACT+TGG - chr8.4:19360827-19360846 MS.gene066099:CDS 40.0%
CCAGTTGTCAAATACACCTA+CGG + chr8.4:19361038-19361057 None:intergenic 40.0%
CCGGTTGGAACAATTAAATC+TGG + chr8.4:19361595-19361614 None:intergenic 40.0%
CGAAACGGCTTGAAGAAAAT+GGG - chr8.4:19361181-19361200 MS.gene066099:CDS 40.0%
CTATCTGGAGAATCACGAAT+AGG + chr8.4:19360158-19360177 None:intergenic 40.0%
CTATTCAGTGCCTCCTAAAA+TGG - chr8.4:19361936-19361955 MS.gene066099:CDS 40.0%
CTGGTATCTTGGGTCTAAAA+CGG + chr8.4:19361654-19361673 None:intergenic 40.0%
CTTCAAACTCCATATTCTCC+GGG + chr8.4:19359188-19359207 None:intergenic 40.0%
CTTCGGTGATTGATAAACCT+TGG + chr8.4:19360345-19360364 None:intergenic 40.0%
CTTCTTCCGATGAAATCCAA+GGG - chr8.4:19360869-19360888 MS.gene066099:CDS 40.0%
CTTGGTAGGGTTAAGCTTTA+TGG - chr8.4:19359273-19359292 MS.gene066099:CDS 40.0%
GAAAAACCAGATTGCCGTAT+AGG - chr8.4:19361082-19361101 MS.gene066099:CDS 40.0%
GAACTTCCTTGACCATCTTT+GGG + chr8.4:19359057-19359076 None:intergenic 40.0%
GATAACCACCTTCTAAACAG+AGG + chr8.4:19360739-19360758 None:intergenic 40.0%
GGCCAAGTATGGCAAAAAAT+GGG - chr8.4:19360925-19360944 MS.gene066099:CDS 40.0%
GTAGATTCGGAGTTAGATTC+AGG + chr8.4:19360406-19360425 None:intergenic 40.0%
GTATCTGAGAGTAACAGTCA+TGG - chr8.4:19360370-19360389 MS.gene066099:CDS 40.0%
GTTTGAAGAGCTTGAAGTTG+AGG - chr8.4:19359200-19359219 MS.gene066099:CDS 40.0%
TACGTTGGAGATTTCCGTTT+GGG - chr8.4:19360079-19360098 MS.gene066099:CDS 40.0%
TCACCATTACCGTTACCATT+AGG + chr8.4:19359783-19359802 None:intergenic 40.0%
TCACCTACAGAGCAATTTCT+CGG - chr8.4:19360104-19360123 MS.gene066099:CDS 40.0%
TCGAAACGGCTTGAAGAAAA+TGG - chr8.4:19361180-19361199 MS.gene066099:CDS 40.0%
TCTTCTTCCGATGAAATCCA+AGG - chr8.4:19360868-19360887 MS.gene066099:CDS 40.0%
TCTTGTTGAACACGAACTAC+CGG + chr8.4:19359642-19359661 None:intergenic 40.0%
TGAAGAGGGAAGAGTTTATC+AGG - chr8.4:19359536-19359555 MS.gene066099:CDS 40.0%
TGAAGCAAAACCGTTGTAAC+TGG + chr8.4:19361544-19361563 None:intergenic 40.0%
TGGCCAAGTATGGCAAAAAA+TGG - chr8.4:19360924-19360943 MS.gene066099:CDS 40.0%
TGTACCTTCACTCTAATCTC+CGG + chr8.4:19360443-19360462 None:intergenic 40.0%
TTAAAGAACTCAACCCGGTT+TGG - chr8.4:19359133-19359152 MS.gene066099:CDS 40.0%
TTATCACGTGCTTGATGAAG+CGG - chr8.4:19360754-19360773 MS.gene066099:CDS 40.0%
TTCTTCCCGGAGATATCTTT+CGG + chr8.4:19359813-19359832 None:intergenic 40.0%
TTGTAGAGGTGAAGAAGCTT+TGG - chr8.4:19359308-19359327 MS.gene066099:CDS 40.0%
TTTGGAAGAATCACCTTCTC+CGG - chr8.4:19359620-19359639 MS.gene066099:CDS 40.0%
! AAAGCCACAGCAACCATTTT+AGG + chr8.4:19361952-19361971 None:intergenic 40.0%
! AATTGTGGCAGTGTTAGCTT+GGG - chr8.4:19361471-19361490 MS.gene066099:CDS 40.0%
! ATTTTGCAACACAAGGTGAG+AGG - chr8.4:19361833-19361852 MS.gene066099:CDS 40.0%
! GACTTCCTAGTTTGTCTGAT+AGG - chr8.4:19362043-19362062 MS.gene066099:CDS 40.0%
! GGAACACAGTTTTCTTGTAG+AGG - chr8.4:19359294-19359313 MS.gene066099:CDS 40.0%
! GGACGAATGTAGTGCATTTT+TGG + chr8.4:19361286-19361305 None:intergenic 40.0%
! GGTCGCAAGAATCATTTTCT+TGG - chr8.4:19359255-19359274 MS.gene066099:CDS 40.0%
! GTTAAGAATGTTGGCTGCAA+GGG - chr8.4:19361792-19361811 MS.gene066099:CDS 40.0%
! TTGGGTGATTTTGCAACACA+AGG - chr8.4:19361826-19361845 MS.gene066099:CDS 40.0%
! TTTCGAGTCAGAACCAGTAA+TGG + chr8.4:19361166-19361185 None:intergenic 40.0%
! TTTTGCAACACAAGGTGAGA+GGG - chr8.4:19361834-19361853 MS.gene066099:CDS 40.0%
!! AGACCTAATGGTAACGGTAA+TGG - chr8.4:19359777-19359796 MS.gene066099:CDS 40.0%
!! ATCGGTTTTGCTGTAACCAA+GGG + chr8.4:19360048-19360067 None:intergenic 40.0%
!! TTACTGGTTCTGACTCGAAA+CGG - chr8.4:19361166-19361185 MS.gene066099:CDS 40.0%
!!! GACCCATTTTTTGCCATACT+TGG + chr8.4:19360930-19360949 None:intergenic 40.0%
!!! GTTTTTTCCTGACACATGTG+CGG - chr8.4:19361240-19361259 MS.gene066099:CDS 40.0%
AAATCCAAGGGTCCAGGAAA+AGG - chr8.4:19360881-19360900 MS.gene066099:CDS 45.0%
AAATGGTTCCCGTTAGAAGG+TGG - chr8.4:19360686-19360705 MS.gene066099:CDS 45.0%
AACCTAACGGTGAATCTGAG+AGG - chr8.4:19359832-19359851 MS.gene066099:CDS 45.0%
AACGGAAAGTTGTATGTCGC+CGG + chr8.4:19360246-19360265 None:intergenic 45.0%
AATCCAAGGGTCCAGGAAAA+GGG - chr8.4:19360882-19360901 MS.gene066099:CDS 45.0%
AATGGTTCCCGTTAGAAGGT+GGG - chr8.4:19360687-19360706 MS.gene066099:CDS 45.0%
ACCTTCTAACGGGAACCATT+TGG + chr8.4:19360687-19360706 None:intergenic 45.0%
ACTCACATGCTTGGAGTATG+AGG - chr8.4:19361425-19361444 MS.gene066099:CDS 45.0%
AGAGGAACAATCACAGTCAC+AGG - chr8.4:19359499-19359518 MS.gene066099:CDS 45.0%
AGGACCATGGAATCTTCTAG+TGG + chr8.4:19360563-19360582 None:intergenic 45.0%
ATAGTCCTCTTGCTCCACAA+TGG - chr8.4:19360174-19360193 MS.gene066099:CDS 45.0%
ATCATCATCATCCTGACGTG+AGG - chr8.4:19359712-19359731 MS.gene066099:CDS 45.0%
ATCCATACCAGCTGGTATCT+TGG + chr8.4:19361665-19361684 None:intergenic 45.0%
ATCCTCTCAGATTCACCGTT+AGG + chr8.4:19359837-19359856 None:intergenic 45.0%
ATCTCCGGGAAGAAACCTAA+CGG - chr8.4:19359819-19359838 MS.gene066099:CDS 45.0%
ATCTTCTACGAGAAGGACCA+TGG + chr8.4:19360576-19360595 None:intergenic 45.0%
ATGCACTACATTCGTCCACT+TGG - chr8.4:19361289-19361308 MS.gene066099:CDS 45.0%
ATGTGTCAGGAAAAAACCCG+GGG + chr8.4:19361237-19361256 None:intergenic 45.0%
CATGTGTCAGGAAAAAACCC+GGG + chr8.4:19361238-19361257 None:intergenic 45.0%
CCGGTTTAAAGAACTCAACC+CGG - chr8.4:19359128-19359147 MS.gene066099:CDS 45.0%
CCGTAGGTGTATTTGACAAC+TGG - chr8.4:19361035-19361054 MS.gene066099:CDS 45.0%
CGAGGTTGTTCGATACATGT+TGG - chr8.4:19361396-19361415 MS.gene066099:CDS 45.0%
CTACGTTGGAGATTTCCGTT+TGG - chr8.4:19360078-19360097 MS.gene066099:CDS 45.0%
CTCTGTAGGTGAATCCCAAA+CGG + chr8.4:19360096-19360115 None:intergenic 45.0%
CTTCTTCCCAAAGATGGTCA+AGG - chr8.4:19359048-19359067 MS.gene066099:CDS 45.0%
GAATTGTGGCAGTGTTAGCT+TGG - chr8.4:19361470-19361489 MS.gene066099:CDS 45.0%
GCAAAAACCTGGTTCCATTC+CGG + chr8.4:19360026-19360045 None:intergenic 45.0%
GCGACATACAACTTTCCGTT+TGG - chr8.4:19360246-19360265 MS.gene066099:CDS 45.0%
GGAACTTCCTTGACCATCTT+TGG + chr8.4:19359058-19359077 None:intergenic 45.0%
GGATTGAGTTCCGATCCAAA+CGG + chr8.4:19360264-19360283 None:intergenic 45.0%
GTGAAATCGAGTTAGCGGTT+CGG - chr8.4:19361203-19361222 MS.gene066099:CDS 45.0%
GTTAGAATCGTGAAGGTTCG+CGG - chr8.4:19359897-19359916 MS.gene066099:CDS 45.0%
GTTGAGTTCTTTAAACCGGG+TGG + chr8.4:19359127-19359146 None:intergenic 45.0%
TAACGAACCCGAACCAAATC+AGG + chr8.4:19361766-19361785 None:intergenic 45.0%
TACAGCAAAACCGATGCAAC+CGG - chr8.4:19360053-19360072 MS.gene066099:CDS 45.0%
TAGCTCCAAACCACCTGATT+TGG - chr8.4:19361750-19361769 MS.gene066099:CDS 45.0%
TCAAGCAACTCGTTCCAAAC+CGG + chr8.4:19359150-19359169 None:intergenic 45.0%
TCCATACCAGCTGGTATCTT+GGG + chr8.4:19361664-19361683 None:intergenic 45.0%
TCCGAATCTACCACCGTTAA+CGG - chr8.4:19360415-19360434 MS.gene066099:CDS 45.0%
TCTCTATGGAAACCTCCAGT+TGG - chr8.4:19360812-19360831 MS.gene066099:CDS 45.0%
TCTTACTGTGTGGCCAAGTA+TGG - chr8.4:19360914-19360933 MS.gene066099:CDS 45.0%
TGAGCCACTAGAAGATTCCA+TGG - chr8.4:19360556-19360575 MS.gene066099:CDS 45.0%
TGAGTTCATCGTTTCTGACC+CGG - chr8.4:19359167-19359186 MS.gene066099:CDS 45.0%
TGATAAACCGCACATGTGTC+AGG + chr8.4:19361250-19361269 None:intergenic 45.0%
TGATACTGCATTTCCGGTTC+CGG + chr8.4:19359693-19359712 None:intergenic 45.0%
TGATCTGACGTAGTGACTTG+AGG + chr8.4:19359964-19359983 None:intergenic 45.0%
TGTAACCAAGGGCAAAAACC+TGG + chr8.4:19360037-19360056 None:intergenic 45.0%
TTAGAATCGTGAAGGTTCGC+GGG - chr8.4:19359898-19359917 MS.gene066099:CDS 45.0%
TTCAACAAGATCCACCGTTG+CGG - chr8.4:19359652-19359671 MS.gene066099:CDS 45.0%
TTCACCGTTAGGTTTCTTCC+CGG + chr8.4:19359826-19359845 None:intergenic 45.0%
TTCCATAGAGATTTCGCGGT+GGG + chr8.4:19360803-19360822 None:intergenic 45.0%
TTTAGACCCAAGATACCAGC+TGG - chr8.4:19361655-19361674 MS.gene066099:CDS 45.0%
TTTCCATAGAGATTTCGCGG+TGG + chr8.4:19360804-19360823 None:intergenic 45.0%
! AAATCAGGTGGTTTGGAGCT+AGG + chr8.4:19361751-19361770 None:intergenic 45.0%
! AGGTTCTAACCTTCACGAAC+GGG + chr8.4:19359944-19359963 None:intergenic 45.0%
! CCGGGTTGAGTTCTTTAAAC+CGG + chr8.4:19359131-19359150 None:intergenic 45.0%
! CGGGTTGAGTTCTTTAAACC+GGG + chr8.4:19359130-19359149 None:intergenic 45.0%
! CTTGACCATCTTTGGGAAGA+AGG + chr8.4:19359050-19359069 None:intergenic 45.0%
! GAGGTTCTAACCTTCACGAA+CGG + chr8.4:19359945-19359964 None:intergenic 45.0%
! GGCATTGGGTTCCTAAACAT+TGG + chr8.4:19361997-19362016 None:intergenic 45.0%
! GGTTAAGAATGTTGGCTGCA+AGG - chr8.4:19361791-19361810 MS.gene066099:CDS 45.0%
! GTTTGCATTTTCCTCACGTC+AGG + chr8.4:19359726-19359745 None:intergenic 45.0%
!! CAAACCACCTGATTTGGTTC+GGG - chr8.4:19361756-19361775 MS.gene066099:CDS 45.0%
!! CCAAACCACCTGATTTGGTT+CGG - chr8.4:19361755-19361774 MS.gene066099:CDS 45.0%
!! GCAAGGGTGCAAACTGTTTT+GGG - chr8.4:19361808-19361827 MS.gene066099:CDS 45.0%
!! GGGTTCAAGCATTGGTTAGT+TGG - chr8.4:19361854-19361873 MS.gene066099:CDS 45.0%
!! GTCCACTGATTCTTACTGTG+TGG - chr8.4:19360904-19360923 MS.gene066099:CDS 45.0%
!! TGCAAGGGTGCAAACTGTTT+TGG - chr8.4:19361807-19361826 MS.gene066099:CDS 45.0%
!!! CATCGGTTTTGCTGTAACCA+AGG + chr8.4:19360049-19360068 None:intergenic 45.0%
AACTGAAAGCCCGTTCGTGA+AGG - chr8.4:19359932-19359951 MS.gene066099:CDS 50.0%
AATCTTCTCACCGTTTGGGG+CGG + chr8.4:19359000-19359019 None:intergenic 50.0%
ACCCAAGATACCAGCTGGTA+TGG - chr8.4:19361660-19361679 MS.gene066099:CDS 50.0%
AGAGAAAACGAACCACCACC+CGG - chr8.4:19359109-19359128 MS.gene066099:CDS 50.0%
AGGTGAGAGGGTTCAAGCAT+TGG - chr8.4:19361846-19361865 MS.gene066099:CDS 50.0%
AGTAGGACCCACCTTCTAAC+GGG + chr8.4:19360697-19360716 None:intergenic 50.0%
AGTCACAGGCATCCGATGAT+GGG - chr8.4:19359513-19359532 MS.gene066099:CDS 50.0%
AGTGAAACGACATGCTGTGG+TGG + chr8.4:19360508-19360527 None:intergenic 50.0%
CAAGCAACTCGTTCCAAACC+GGG + chr8.4:19359149-19359168 None:intergenic 50.0%
CACCTACGCCTCTGTTTAGA+AGG - chr8.4:19360728-19360747 MS.gene066099:CDS 50.0%
CAGTAGGACCCACCTTCTAA+CGG + chr8.4:19360698-19360717 None:intergenic 50.0%
CCAAACGGTGAGAAGATTGG+CGG - chr8.4:19359002-19359021 MS.gene066099:CDS 50.0%
CCACTAAGATGGTAGCTCAG+TGG - chr8.4:19361344-19361363 MS.gene066099:CDS 50.0%
CCACTGAGCTACCATCTTAG+TGG + chr8.4:19361347-19361366 None:intergenic 50.0%
CCGAACCAAATCAGGTGGTT+TGG + chr8.4:19361758-19361777 None:intergenic 50.0%
CCTACAGAGCAATTTCTCGG+CGG - chr8.4:19360107-19360126 MS.gene066099:CDS 50.0%
CCTACGGTTAAGACAGTGCA+AGG + chr8.4:19361022-19361041 None:intergenic 50.0%
CCTGGACCCTTGGATTTCAT+CGG + chr8.4:19360878-19360897 None:intergenic 50.0%
CCTTGCACTGTCTTAACCGT+AGG - chr8.4:19361019-19361038 MS.gene066099:CDS 50.0%
CGAAGCTATCCGTTACGGTT+CGG + chr8.4:19360958-19360977 None:intergenic 50.0%
CGCAACCTTCTTCCCAAAGA+TGG - chr8.4:19359042-19359061 MS.gene066099:CDS 50.0%
CGCCAATCTTCTCACCGTTT+GGG + chr8.4:19359004-19359023 None:intergenic 50.0%
CGTTTCTGACCCGGAGAATA+TGG - chr8.4:19359176-19359195 MS.gene066099:CDS 50.0%
CTACGCCTCTGTTTAGAAGG+TGG - chr8.4:19360731-19360750 MS.gene066099:CDS 50.0%
CTTCCCTCTTCACCCATCAT+CGG + chr8.4:19359528-19359547 None:intergenic 50.0%
GAACGAACAGTACACATGGC+AGG - chr8.4:19360988-19361007 MS.gene066099:CDS 50.0%
GAAGATCTTCTCTTCGTCGC+CGG - chr8.4:19360533-19360552 MS.gene066099:CDS 50.0%
GAAGCTATCCGTTACGGTTC+GGG + chr8.4:19360957-19360976 None:intergenic 50.0%
GAGTTCAGATGCACCATACG+TGG - chr8.4:19360307-19360326 MS.gene066099:CDS 50.0%
GAGTTCTTTAAACCGGGTGG+TGG + chr8.4:19359124-19359143 None:intergenic 50.0%
GATCAAAGCCCGCGAGTTAT+AGG - chr8.4:19359979-19359998 MS.gene066099:CDS 50.0%
GCATCTGAACTCCATGCTTC+TGG + chr8.4:19360299-19360318 None:intergenic 50.0%
GCCAAATGGTTCCCGTTAGA+AGG - chr8.4:19360683-19360702 MS.gene066099:CDS 50.0%
GCCAATCTTCTCACCGTTTG+GGG + chr8.4:19359003-19359022 None:intergenic 50.0%
GCCGTTAACGGTGGTAGATT+CGG + chr8.4:19360419-19360438 None:intergenic 50.0%
GCCTCCTAAAATGGTTGCTG+TGG - chr8.4:19361945-19361964 MS.gene066099:CDS 50.0%
GGAAATCTCCAACGTAGCAC+CGG + chr8.4:19360075-19360094 None:intergenic 50.0%
GGAATCTTCTAGTGGCTCAC+CGG + chr8.4:19360555-19360574 None:intergenic 50.0%
GGCCACACAGTAAGAATCAG+TGG + chr8.4:19360909-19360928 None:intergenic 50.0%
GGTGGAACGAACAGTACACA+TGG - chr8.4:19360984-19361003 MS.gene066099:CDS 50.0%
GTTTAGGAACCCAATGCCTC+CGG - chr8.4:19361999-19362018 MS.gene066099:CDS 50.0%
TAAGATGGTAGCTCAGTGGC+TGG - chr8.4:19361348-19361367 MS.gene066099:CDS 50.0%
TACGCGCCGAAAGATATCTC+CGG - chr8.4:19359804-19359823 MS.gene066099:CDS 50.0%
TAGAAGGTGGGTCCTACTGT+GGG - chr8.4:19360699-19360718 MS.gene066099:CDS 50.0%
TCAACAAGATCCACCGTTGC+GGG - chr8.4:19359653-19359672 MS.gene066099:CDS 50.0%
TCTAACGGGAACCATTTGGC+TGG + chr8.4:19360683-19360702 None:intergenic 50.0%
TCTTCCAAAACCACCACTCG+CGG + chr8.4:19359609-19359628 None:intergenic 50.0%
TGAACACGAACTACCGGAGA+AGG + chr8.4:19359636-19359655 None:intergenic 50.0%
TGGGTCGAAGCTATCCGTTA+CGG + chr8.4:19360963-19360982 None:intergenic 50.0%
TGGTGCGATCTTCTACGAGA+AGG + chr8.4:19360583-19360602 None:intergenic 50.0%
TGTACTGTTCGTTCCACCGT+GGG + chr8.4:19360982-19361001 None:intergenic 50.0%
TGTGGAGCAAGAGGACTATC+TGG + chr8.4:19360173-19360192 None:intergenic 50.0%
TTAGAAGGTGGGTCCTACTG+TGG - chr8.4:19360698-19360717 MS.gene066099:CDS 50.0%
TTCCATTCCGGCGAGTCATT+GGG + chr8.4:19360014-19360033 None:intergenic 50.0%
TTCGTTGGGCCTATAACTCG+CGG + chr8.4:19359991-19360010 None:intergenic 50.0%
! ACCACAGCATGTCGTTTCAC+TGG - chr8.4:19360507-19360526 MS.gene066099:CDS 50.0%
! ACGACGCTTTTCCAGAAGCA+TGG - chr8.4:19360285-19360304 MS.gene066099:CDS 50.0%
! CACCTTCTAAACAGAGGCGT+AGG + chr8.4:19360733-19360752 None:intergenic 50.0%
! CTACATTCGTCCACTTGGTG+TGG - chr8.4:19361294-19361313 MS.gene066099:CDS 50.0%
! CTGGCGTATGTTTGCTGATG+TGG - chr8.4:19361054-19361073 MS.gene066099:CDS 50.0%
! CTTCTAAACAGAGGCGTAGG+TGG + chr8.4:19360730-19360749 None:intergenic 50.0%
! GAATCAGTGGACCCTTTTCC+TGG + chr8.4:19360896-19360915 None:intergenic 50.0%
! GCCACAGCAACCATTTTAGG+AGG + chr8.4:19361949-19361968 None:intergenic 50.0%
! TAACGGATAGCTTCGACCCA+CGG - chr8.4:19360963-19360982 MS.gene066099:CDS 50.0%
! TGGAACCAGGTTTTTGCCCT+TGG - chr8.4:19360029-19360048 MS.gene066099:CDS 50.0%
! TGGTTCGGGTTCGTTATGAC+AGG - chr8.4:19361770-19361789 MS.gene066099:CDS 50.0%
! TTCAAACTAGCCGGAGGCAT+TGG + chr8.4:19362012-19362031 None:intergenic 50.0%
! TTCACGAACGGGCTTTCAGT+TGG + chr8.4:19359933-19359952 None:intergenic 50.0%
!! CATCCGATGATGGGTGAAGA+GGG - chr8.4:19359522-19359541 MS.gene066099:CDS 50.0%
!! CATTGTGTGCCACTTCCTGA+CGG - chr8.4:19359573-19359592 MS.gene066099:CDS 50.0%
!! GGGCTGTTGGATTAGCTAAG+TGG - chr8.4:19361491-19361510 MS.gene066099:CDS 50.0%
!! TCAAACTAGCCGGAGGCATT+GGG + chr8.4:19362011-19362030 None:intergenic 50.0%
!! TGCTTCTGGAAAAGCGTCGT+CGG + chr8.4:19360285-19360304 None:intergenic 50.0%
!! TGGATGCTGACTCACATGCT+TGG - chr8.4:19361416-19361435 MS.gene066099:CDS 50.0%
AAAACCACCACTCGCGGTGA+AGG + chr8.4:19359603-19359622 None:intergenic 55.0%
AACCCAATGACTCGCCGGAA+TGG - chr8.4:19360009-19360028 MS.gene066099:CDS 55.0%
AACGGTGAGAAGATTGGCGG+TGG - chr8.4:19359005-19359024 MS.gene066099:CDS 55.0%
AAGTTCCAGCCCTTACGTGG+TGG - chr8.4:19359071-19359090 MS.gene066099:CDS 55.0%
ACCAAGGAAGCGGCGTTACT+CGG - chr8.4:19360602-19360621 MS.gene066099:CDS 55.0%
ACGCGCCGAAAGATATCTCC+GGG - chr8.4:19359805-19359824 MS.gene066099:CDS 55.0%
ACGTCAGAGGAATGACGACG+TGG + chr8.4:19360628-19360647 None:intergenic 55.0%
AGATCGCACCACCAAGGAAG+CGG - chr8.4:19360592-19360611 MS.gene066099:CDS 55.0%
AGGAAGTTCCAGCCCTTACG+TGG - chr8.4:19359068-19359087 MS.gene066099:CDS 55.0%
CAAAACGCCGGTAGAGTCTC+CGG - chr8.4:19360224-19360243 MS.gene066099:CDS 55.0%
CAACGAACCCAATGACTCGC+CGG - chr8.4:19360004-19360023 MS.gene066099:CDS 55.0%
CAATGGTACCGTCTCGAAGG+TGG - chr8.4:19360191-19360210 MS.gene066099:CDS 55.0%
CAGTCACAGGCATCCGATGA+TGG - chr8.4:19359512-19359531 MS.gene066099:CDS 55.0%
CCACAATGGTACCGTCTCGA+AGG - chr8.4:19360188-19360207 MS.gene066099:CDS 55.0%
CCGATGAAATCCAAGGGTCC+AGG - chr8.4:19360875-19360894 MS.gene066099:CDS 55.0%
CCGCCAATCTTCTCACCGTT+TGG + chr8.4:19359005-19359024 None:intergenic 55.0%
CCGCCGAGAAATTGCTCTGT+AGG + chr8.4:19360110-19360129 None:intergenic 55.0%
CCTTCGAGACGGTACCATTG+TGG + chr8.4:19360191-19360210 None:intergenic 55.0%
CGAACCCGAACCAAATCAGG+TGG + chr8.4:19361763-19361782 None:intergenic 55.0%
CGCTGTTCGATTGACGTCAG+AGG + chr8.4:19360641-19360660 None:intergenic 55.0%
CGGTACCATTGTGGAGCAAG+AGG + chr8.4:19360182-19360201 None:intergenic 55.0%
CGTAGAAGATCGCACCACCA+AGG - chr8.4:19360586-19360605 MS.gene066099:CDS 55.0%
CTAATCTCCGGCGCCGTTAA+CGG + chr8.4:19360431-19360450 None:intergenic 55.0%
CTTGGAATCTTAGGCGCTCG+TGG - chr8.4:19360845-19360864 MS.gene066099:CDS 55.0%
GATGTACGCTCAACCGGAAC+CGG - chr8.4:19359677-19359696 MS.gene066099:CDS 55.0%
GCAACGACGCCGTTTCAACA+AGG - chr8.4:19358973-19358992 MS.gene066099:CDS 55.0%
GCCAGTGAAACGACATGCTG+TGG + chr8.4:19360511-19360530 None:intergenic 55.0%
GCCCCAAACGGTGAGAAGAT+TGG - chr8.4:19358999-19359018 MS.gene066099:CDS 55.0%
GGCGAGTCATTGGGTTCGTT+GGG + chr8.4:19360005-19360024 None:intergenic 55.0%
GGTCAGAACCCGAACCGTAA+CGG - chr8.4:19360946-19360965 MS.gene066099:CDS 55.0%
GTCCCACCGCGAAATCTCTA+TGG - chr8.4:19360798-19360817 MS.gene066099:CDS 55.0%
GTGTACTGTTCGTTCCACCG+TGG + chr8.4:19360983-19361002 None:intergenic 55.0%
GTTCCATTCCGGCGAGTCAT+TGG + chr8.4:19360015-19360034 None:intergenic 55.0%
TATGTCGCCGGAGACTCTAC+CGG + chr8.4:19360234-19360253 None:intergenic 55.0%
TCAACAAGGACCGCCCCAAA+CGG - chr8.4:19358987-19359006 MS.gene066099:CDS 55.0%
TCGTTGGGCCTATAACTCGC+GGG + chr8.4:19359990-19360009 None:intergenic 55.0%
TGAGCGTACATCTCCCGCAA+CGG + chr8.4:19359669-19359688 None:intergenic 55.0%
TGGGGCGGTCCTTGTTGAAA+CGG + chr8.4:19358985-19359004 None:intergenic 55.0%
! ACGAACGGGCTTTCAGTTGG+AGG + chr8.4:19359930-19359949 None:intergenic 55.0%
! GCAGTGTTAGCTTGGGCTGT+TGG - chr8.4:19361478-19361497 MS.gene066099:CDS 55.0%
! TAGGTGGACTCTCCCACAGT+AGG + chr8.4:19360714-19360733 None:intergenic 55.0%
! TTCACCGCGAGTGGTGGTTT+TGG - chr8.4:19359602-19359621 MS.gene066099:CDS 55.0%
!! CAACGTAGCACCGGTTGCAT+CGG + chr8.4:19360066-19360085 None:intergenic 55.0%
!! GCATCCGATGATGGGTGAAG+AGG - chr8.4:19359521-19359540 MS.gene066099:CDS 55.0%
ACCATTTGGCTGGCACGTGG+CGG + chr8.4:19360673-19360692 None:intergenic 60.0%
CCAACAGGAGGCTTTACGCG+GGG - chr8.4:19361318-19361337 MS.gene066099:CDS 60.0%
CCCAACAGGAGGCTTTACGC+GGG - chr8.4:19361317-19361336 MS.gene066099:CDS 60.0%
CCCGCGTAAAGCCTCCTGTT+GGG + chr8.4:19361320-19361339 None:intergenic 60.0%
CGAACAACCTCGTGCCCCAT+CGG + chr8.4:19361388-19361407 None:intergenic 60.0%
CGAAGTCCGCCACCACGTAA+GGG + chr8.4:19359083-19359102 None:intergenic 60.0%
CGGCGAGTCATTGGGTTCGT+TGG + chr8.4:19360006-19360025 None:intergenic 60.0%
GAAGGAGGACCGTCAGGAAG+TGG + chr8.4:19359585-19359604 None:intergenic 60.0%
GAGCGAGTGTGTGCCACGTA+TGG + chr8.4:19360323-19360342 None:intergenic 60.0%
GAGTAACGCCGCTTCCTTGG+TGG + chr8.4:19360603-19360622 None:intergenic 60.0%
GCCCAACAGGAGGCTTTACG+CGG - chr8.4:19361316-19361335 MS.gene066099:CDS 60.0%
GCGGGAGATGTACGCTCAAC+CGG - chr8.4:19359671-19359690 MS.gene066099:CDS 60.0%
GGAACCATTTGGCTGGCACG+TGG + chr8.4:19360676-19360695 None:intergenic 60.0%
GGCGCAGCAGAACAAAACGC+CGG - chr8.4:19360212-19360231 MS.gene066099:CDS 60.0%
TCCTGTTGGGCCACACCAAG+TGG + chr8.4:19361307-19361326 None:intergenic 60.0%
TCGAAGTCCGCCACCACGTA+AGG + chr8.4:19359084-19359103 None:intergenic 60.0%
TCTACCACCGTTAACGGCGC+CGG - chr8.4:19360421-19360440 MS.gene066099:CDS 60.0%
TGACTCGCCGGAATGGAACC+AGG - chr8.4:19360016-19360035 MS.gene066099:CDS 60.0%
TTCCAGCCCTTACGTGGTGG+CGG - chr8.4:19359074-19359093 MS.gene066099:CDS 60.0%
! GGACCCTTTTCCTGGACCCT+TGG + chr8.4:19360888-19360907 None:intergenic 60.0%
! GGCGCCGGAGATTAGAGTGA+AGG - chr8.4:19360436-19360455 MS.gene066099:CDS 60.0%
!! ACTTGGTGTGGCCCAACAGG+AGG - chr8.4:19361306-19361325 MS.gene066099:CDS 60.0%
!! CGATGCAACCGGTGCTACGT+TGG - chr8.4:19360064-19360083 MS.gene066099:CDS 60.0%
!! TACGTGGTGGCGGACTTCGA+CGG - chr8.4:19359084-19359103 MS.gene066099:CDS 60.0%
!! TCCACTTGGTGTGGCCCAAC+AGG - chr8.4:19361303-19361322 MS.gene066099:CDS 60.0%
ACAACCTCGTGCCCCATCGG+AGG + chr8.4:19361385-19361404 None:intergenic 65.0%
ACCACCACTCGCGGTGAAGG+AGG + chr8.4:19359600-19359619 None:intergenic 65.0%
ACCGCCACGTGCCAGCCAAA+TGG - chr8.4:19360669-19360688 MS.gene066099:CDS 65.0%
ACGCGGGGCAGCCACTAAGA+TGG - chr8.4:19361333-19361352 MS.gene066099:CDS 65.0%
ACGGTGGCGCAGAGCAAGAG+AGG - chr8.4:19359481-19359500 MS.gene066099:CDS 65.0%
ATCTCCGGCGCCGTTAACGG+TGG + chr8.4:19360428-19360447 None:intergenic 65.0%
CCCCGCGTAAAGCCTCCTGT+TGG + chr8.4:19361321-19361340 None:intergenic 65.0%
CGGATAGCTTCGACCCACGG+TGG - chr8.4:19360966-19360985 MS.gene066099:CDS 65.0%
CGTGGCACACACTCGCTCCA+AGG - chr8.4:19360325-19360344 MS.gene066099:CDS 65.0%
CTCGCTCAGAGCCTCCGATG+GGG - chr8.4:19361371-19361390 MS.gene066099:CDS 65.0%
CTGCTGCGCCACCTTCGAGA+CGG + chr8.4:19360202-19360221 None:intergenic 65.0%
GCAAGAACAACCACCGCCGC+CGG - chr8.4:19359446-19359465 MS.gene066099:CDS 65.0%
GCCGAGTAACGCCGCTTCCT+TGG + chr8.4:19360606-19360625 None:intergenic 65.0%
GCGTACATCTCCCGCAACGG+TGG + chr8.4:19359666-19359685 None:intergenic 65.0%
GCTCGCTCAGAGCCTCCGAT+GGG - chr8.4:19361370-19361389 MS.gene066099:CDS 65.0%
TCCTCCTTCACCGCGAGTGG+TGG - chr8.4:19359596-19359615 MS.gene066099:CDS 65.0%
AGAACAACCACCGCCGCCGG+AGG - chr8.4:19359449-19359468 MS.gene066099:CDS 70.0%
AGAGCCTCCGATGGGGCACG+AGG - chr8.4:19361378-19361397 MS.gene066099:CDS 70.0%
CGCGGTGAAGGAGGACCGTC+AGG + chr8.4:19359591-19359610 None:intergenic 70.0%
CGGTCCTCCTTCACCGCGAG+TGG - chr8.4:19359593-19359612 MS.gene066099:CDS 70.0%
GGCTCGCTCAGAGCCTCCGA+TGG - chr8.4:19361369-19361388 MS.gene066099:CDS 70.0%
GTCCGCCACCACGTAAGGGC+TGG + chr8.4:19359079-19359098 None:intergenic 70.0%
! CCACCGTGCCGCTCTTCCTC+CGG + chr8.4:19359468-19359487 None:intergenic 70.0%
!! CGGTTCGGTTCGCTTGCCCC+GGG - chr8.4:19361218-19361237 MS.gene066099:CDS 70.0%
!! GCGGTTCGGTTCGCTTGCCC+CGG - chr8.4:19361217-19361236 MS.gene066099:CDS 70.0%
CACCGCCGCCGGAGGAAGAG+CGG - chr8.4:19359457-19359476 MS.gene066099:CDS 75.0%
CCGCCGGAGGAAGAGCGGCA+CGG - chr8.4:19359462-19359481 MS.gene066099:CDS 75.0%
CCGGAGGAAGAGCGGCACGG+TGG - chr8.4:19359465-19359484 MS.gene066099:CDS 75.0%
TGCCGCTCTTCCTCCGGCGG+CGG + chr8.4:19359462-19359481 None:intergenic 75.0%
! CCGTGCCGCTCTTCCTCCGG+CGG + chr8.4:19359465-19359484 None:intergenic 75.0%
! CGCTCTTCCTCCGGCGGCGG+TGG + chr8.4:19359459-19359478 None:intergenic 80.0%


Chromosome Type Strat End Strand Name
chr8.4 gene 19358970 19362074 19358970 ID=MS.gene066099
chr8.4 mRNA 19358970 19362074 19358970 ID=MS.gene066099.t1;Parent=MS.gene066099
chr8.4 exon 19358970 19362074 19358970 ID=MS.gene066099.t1.exon1;Parent=MS.gene066099.t1
chr8.4 CDS 19358970 19362074 19358970 ID=cds.MS.gene066099.t1;Parent=MS.gene066099.t1
Gene Sequence

>MS.gene066099

ATGGCAACGACGCCGTTTCAACAAGGACCGCCCCAAACGGTGAGAAGATTGGCGGTGGAAGTTGTTGACGCACGCAACCTTCTTCCCAAAGATGGTCAAGGAAGTTCCAGCCCTTACGTGGTGGCGGACTTCGACGGTCAGAGAAAACGAACCACCACCCGGTTTAAAGAACTCAACCCGGTTTGGAACGAGTTGCTTGAGTTCATCGTTTCTGACCCGGAGAATATGGAGTTTGAAGAGCTTGAAGTTGAGGTTTATAATGATAAGAAATTTGGGAATGGTAGTGGTCGCAAGAATCATTTTCTTGGTAGGGTTAAGCTTTATGGAACACAGTTTTCTTGTAGAGGTGAAGAAGCTTTGGTTTATTATACTTTAGAGAAGAAAAGTGTTTTCAGTTGGATTAGAGGTGAAATCGGTTTGAAGATTTATTACTACGATGAGTTGTTACAGCAAGATGAACATCAGCAGCAGCAGCAGCAAGAACAACCACCGCCGCCGGAGGAAGAGCGGCACGGTGGCGCAGAGCAAGAGAGGAACAATCACAGTCACAGGCATCCGATGATGGGTGAAGAGGGAAGAGTTTATCAGGTTGAACAGATGGAGCATTGTGTGCCACTTCCTGACGGTCCTCCTTCACCGCGAGTGGTGGTTTTGGAAGAATCACCTTCTCCGGTAGTTCGTGTTCAACAAGATCCACCGTTGCGGGAGATGTACGCTCAACCGGAACCGGAAATGCAGTATCATCATCATCATCCTGACGTGAGGAAAATGCAAACAATGAGGAATGATAGAGTGAAGATTATGAAGAGACCTAATGGTAACGGTAATGGTGATTACGCGCCGAAAGATATCTCCGGGAAGAAACCTAACGGTGAATCTGAGAGGATTCATCCCTATGATCTAGTTGAACCAATGCAGTATCTGTTTGTTAGAATCGTGAAGGTTCGCGGGCTTAATCCTCCAACTGAAAGCCCGTTCGTGAAGGTTAGAACCTCAAGTCACTACGTCAGATCAAAGCCCGCGAGTTATAGGCCCAACGAACCCAATGACTCGCCGGAATGGAACCAGGTTTTTGCCCTTGGTTACAGCAAAACCGATGCAACCGGTGCTACGTTGGAGATTTCCGTTTGGGATTCACCTACAGAGCAATTTCTCGGCGGTGTTTGCTTTGATCTTTCTGATGTACCTATTCGTGATTCTCCAGATAGTCCTCTTGCTCCACAATGGTACCGTCTCGAAGGTGGCGCAGCAGAACAAAACGCCGGTAGAGTCTCCGGCGACATACAACTTTCCGTTTGGATCGGAACTCAATCCGACGACGCTTTTCCAGAAGCATGGAGTTCAGATGCACCATACGTGGCACACACTCGCTCCAAGGTTTATCAATCACCGAAGCTTTGGTATCTGAGAGTAACAGTCATGGAAGCACAAGACCTGAATCTAACTCCGAATCTACCACCGTTAACGGCGCCGGAGATTAGAGTGAAGGTACAATTAGGGTTTCAATCACAGAGAACAAGAAGAGGCTCAATGAACCACCACAGCATGTCGTTTCACTGGCACGAAGATCTTCTCTTCGTCGCCGGTGAGCCACTAGAAGATTCCATGGTCCTTCTCGTAGAAGATCGCACCACCAAGGAAGCGGCGTTACTCGGCCACGTCGTCATTCCTCTGACGTCAATCGAACAGCGAATAGACGACCGCCACGTGCCAGCCAAATGGTTCCCGTTAGAAGGTGGGTCCTACTGTGGGAGAGTCCACCTACGCCTCTGTTTAGAAGGTGGTTATCACGTGCTTGATGAAGCGGCGCACGTGTGTAGTGATTTTCGTCCCACCGCGAAATCTCTATGGAAACCTCCAGTTGGAATTCTTGAACTTGGAATCTTAGGCGCTCGTGGTCTTCTTCCGATGAAATCCAAGGGTCCAGGAAAAGGGTCCACTGATTCTTACTGTGTGGCCAAGTATGGCAAAAAATGGGTCAGAACCCGAACCGTAACGGATAGCTTCGACCCACGGTGGAACGAACAGTACACATGGCAGGTATATGATCCTTGCACTGTCTTAACCGTAGGTGTATTTGACAACTGGCGTATGTTTGCTGATGTGGCAGAAGAAAAACCAGATTGCCGTATAGGTAAAATTCGTATACGAGTTTCTACACTAGAGAGCAATAAAATCTACACAAGTTCATATCCATTACTGGTTCTGACTCGAAACGGCTTGAAGAAAATGGGTGAAATCGAGTTAGCGGTTCGGTTCGCTTGCCCCGGGTTTTTTCCTGACACATGTGCGGTTTATCAACAACCATTACTTCCAAAAATGCACTACATTCGTCCACTTGGTGTGGCCCAACAGGAGGCTTTACGCGGGGCAGCCACTAAGATGGTAGCTCAGTGGCTGGCTCGCTCAGAGCCTCCGATGGGGCACGAGGTTGTTCGATACATGTTGGATGCTGACTCACATGCTTGGAGTATGAGGAAAAGTAAAGCCAATTGGTTTAGAATTGTGGCAGTGTTAGCTTGGGCTGTTGGATTAGCTAAGTGGTTAGATGATATAAGAAGATGGAAAAATCCAGTTACAACGGTTTTGCTTCATATACTTTACTTGGTCCTTGTTTGGTATCCAGATTTAATTGTTCCAACCGGGTTTTTATATGTTGTTTTGATTGGAATATGGTATTTCCGTTTTAGACCCAAGATACCAGCTGGTATGGATACAAGATTATCACAAGCTGAAGCCGTTGATCCAGATGAATTAGATGAAGAATTTGACACAATGCCTAGCTCCAAACCACCTGATTTGGTTCGGGTTCGTTATGACAGGTTAAGAATGTTGGCTGCAAGGGTGCAAACTGTTTTGGGTGATTTTGCAACACAAGGTGAGAGGGTTCAAGCATTGGTTAGTTGGAGAGACCCAAGAGCTACAAAATTGTTCATTGGAGTGTGTCTTGTTATTGCTATTATACTCTATTCAGTGCCTCCTAAAATGGTTGCTGTGGCTTTAGGATTCTACTATCTTCGTCATCCAATGTTTAGGAACCCAATGCCTCCGGCTAGTTTGAACTTTTTCAGAAGACTTCCTAGTTTGTCTGATAGGTTGATGTAG
Protein sequence

>MS.gene066099.t1

MATTPFQQGPPQTVRRLAVEVVDARNLLPKDGQGSSSPYVVADFDGQRKRTTTRFKELNPVWNELLEFIVSDPENMEFEELEVEVYNDKKFGNGSGRKNHFLGRVKLYGTQFSCRGEEALVYYTLEKKSVFSWIRGEIGLKIYYYDELLQQDEHQQQQQQEQPPPPEEERHGGAEQERNNHSHRHPMMGEEGRVYQVEQMEHCVPLPDGPPSPRVVVLEESPSPVVRVQQDPPLREMYAQPEPEMQYHHHHPDVRKMQTMRNDRVKIMKRPNGNGNGDYAPKDISGKKPNGESERIHPYDLVEPMQYLFVRIVKVRGLNPPTESPFVKVRTSSHYVRSKPASYRPNEPNDSPEWNQVFALGYSKTDATGATLEISVWDSPTEQFLGGVCFDLSDVPIRDSPDSPLAPQWYRLEGGAAEQNAGRVSGDIQLSVWIGTQSDDAFPEAWSSDAPYVAHTRSKVYQSPKLWYLRVTVMEAQDLNLTPNLPPLTAPEIRVKVQLGFQSQRTRRGSMNHHSMSFHWHEDLLFVAGEPLEDSMVLLVEDRTTKEAALLGHVVIPLTSIEQRIDDRHVPAKWFPLEGGSYCGRVHLRLCLEGGYHVLDEAAHVCSDFRPTAKSLWKPPVGILELGILGARGLLPMKSKGPGKGSTDSYCVAKYGKKWVRTRTVTDSFDPRWNEQYTWQVYDPCTVLTVGVFDNWRMFADVAEEKPDCRIGKIRIRVSTLESNKIYTSSYPLLVLTRNGLKKMGEIELAVRFACPGFFPDTCAVYQQPLLPKMHYIRPLGVAQQEALRGAATKMVAQWLARSEPPMGHEVVRYMLDADSHAWSMRKSKANWFRIVAVLAWAVGLAKWLDDIRRWKNPVTTVLLHILYLVLVWYPDLIVPTGFLYVVLIGIWYFRFRPKIPAGMDTRLSQAEAVDPDELDEEFDTMPSSKPPDLVRVRYDRLRMLAARVQTVLGDFATQGERVQALVSWRDPRATKLFIGVCLVIAIILYSVPPKMVAVALGFYYLRHPMFRNPMPPASLNFFRRLPSLSDRLM