Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene066418.t1 | XP_003590372.1 | 90.8 | 314 | 29 | 0 | 1 | 314 | 1 | 314 | 8.70E-140 | 506.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene066418.t1 | Q8VZ02 | 52.7 | 311 | 100 | 8 | 7 | 295 | 21 | 306 | 3.2e-50 | 200.3 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene066418.t1 | G7I997 | 90.8 | 314 | 29 | 0 | 1 | 314 | 1 | 314 | 6.3e-140 | 506.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene066418.t1 | TF | bHLH |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene066418 | MS.gene072361 | PPI |
MS.gene066418 | MS.gene048647 | PPI |
MS.gene066418 | MS.gene048648 | PPI |
MS.gene066418 | MS.gene017944 | PPI |
MS.gene066418 | MS.gene072362 | PPI |
MS.gene066418 | MS.gene014167 | PPI |
MS.gene017944 | MS.gene066418 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene066418.t1 | MTR_1g059270 | 97.134 | 314 | 9 | 0 | 1 | 314 | 1 | 314 | 0.0 | 630 |
MS.gene066418.t1 | MTR_1g059270 | 96.356 | 247 | 9 | 0 | 1 | 247 | 1 | 247 | 1.79e-175 | 486 |
MS.gene066418.t1 | MTR_7g092510 | 66.667 | 327 | 81 | 7 | 1 | 306 | 1 | 320 | 5.85e-132 | 379 |
MS.gene066418.t1 | MTR_4g070320 | 55.882 | 136 | 55 | 1 | 115 | 245 | 93 | 228 | 1.60e-42 | 150 |
MS.gene066418.t1 | MTR_1g017350 | 42.991 | 214 | 87 | 7 | 87 | 279 | 201 | 400 | 1.23e-40 | 146 |
MS.gene066418.t1 | MTR_1g017350 | 42.991 | 214 | 87 | 7 | 87 | 279 | 201 | 400 | 1.33e-40 | 146 |
MS.gene066418.t1 | MTR_1g017350 | 42.396 | 217 | 87 | 7 | 87 | 279 | 201 | 403 | 3.18e-40 | 145 |
MS.gene066418.t1 | MTR_1g017350 | 42.396 | 217 | 87 | 7 | 87 | 279 | 201 | 403 | 4.06e-40 | 145 |
MS.gene066418.t1 | MTR_7g053410 | 46.739 | 184 | 78 | 5 | 116 | 285 | 259 | 436 | 5.07e-40 | 147 |
MS.gene066418.t1 | MTR_3g116770 | 69.072 | 97 | 30 | 0 | 157 | 253 | 188 | 284 | 6.34e-40 | 144 |
MS.gene066418.t1 | MTR_3g116770 | 69.072 | 97 | 30 | 0 | 157 | 253 | 188 | 284 | 6.35e-40 | 144 |
MS.gene066418.t1 | MTR_7g053410 | 46.739 | 184 | 78 | 5 | 116 | 285 | 259 | 436 | 6.95e-40 | 147 |
MS.gene066418.t1 | MTR_8g099880 | 70.408 | 98 | 24 | 3 | 151 | 243 | 134 | 231 | 1.69e-39 | 141 |
MS.gene066418.t1 | MTR_8g065740 | 55.970 | 134 | 50 | 3 | 112 | 242 | 260 | 387 | 3.06e-39 | 144 |
MS.gene066418.t1 | MTR_8g012290 | 60.784 | 102 | 40 | 0 | 157 | 258 | 288 | 389 | 9.77e-38 | 140 |
MS.gene066418.t1 | MTR_8g012290 | 60.784 | 102 | 40 | 0 | 157 | 258 | 288 | 389 | 9.80e-38 | 140 |
MS.gene066418.t1 | MTR_5g048860 | 69.663 | 89 | 27 | 0 | 157 | 245 | 362 | 450 | 1.38e-37 | 140 |
MS.gene066418.t1 | MTR_8g062240 | 70.588 | 85 | 25 | 0 | 157 | 241 | 148 | 232 | 7.31e-37 | 133 |
MS.gene066418.t1 | MTR_3g498825 | 56.522 | 115 | 41 | 2 | 157 | 268 | 144 | 252 | 3.42e-36 | 133 |
MS.gene066418.t1 | MTR_5g037250 | 54.032 | 124 | 57 | 0 | 108 | 231 | 60 | 183 | 9.26e-36 | 129 |
MS.gene066418.t1 | MTR_6g084120 | 38.994 | 159 | 69 | 4 | 82 | 237 | 90 | 223 | 4.26e-24 | 99.4 |
MS.gene066418.t1 | MTR_4g131160 | 48.454 | 97 | 40 | 3 | 156 | 248 | 195 | 285 | 1.94e-17 | 82.4 |
MS.gene066418.t1 | MTR_4g131160 | 48.454 | 97 | 40 | 3 | 156 | 248 | 192 | 282 | 2.00e-17 | 82.4 |
MS.gene066418.t1 | MTR_1g080890 | 38.095 | 126 | 70 | 4 | 160 | 283 | 193 | 312 | 7.68e-17 | 80.5 |
MS.gene066418.t1 | MTR_4g065870 | 49.231 | 65 | 33 | 0 | 160 | 224 | 355 | 419 | 8.10e-13 | 68.9 |
MS.gene066418.t1 | MTR_7g099540 | 32.394 | 142 | 86 | 2 | 98 | 230 | 181 | 321 | 1.12e-12 | 68.6 |
MS.gene066418.t1 | MTR_1g069155 | 44.928 | 69 | 37 | 1 | 162 | 230 | 319 | 386 | 4.04e-12 | 67.0 |
MS.gene066418.t1 | MTR_4g033295 | 43.750 | 64 | 36 | 0 | 160 | 223 | 118 | 181 | 6.38e-12 | 63.9 |
MS.gene066418.t1 | MTR_4g065870 | 48.387 | 62 | 32 | 0 | 160 | 221 | 355 | 416 | 6.98e-12 | 66.2 |
MS.gene066418.t1 | MTR_4g033295 | 46.154 | 65 | 35 | 0 | 160 | 224 | 118 | 182 | 1.03e-11 | 63.5 |
MS.gene066418.t1 | MTR_2g098310 | 44.615 | 65 | 36 | 0 | 160 | 224 | 332 | 396 | 1.12e-11 | 65.5 |
MS.gene066418.t1 | MTR_1g070870 | 48.276 | 87 | 39 | 3 | 160 | 241 | 120 | 205 | 3.70e-11 | 63.2 |
MS.gene066418.t1 | MTR_1g070870 | 48.276 | 87 | 39 | 3 | 160 | 241 | 123 | 208 | 3.86e-11 | 63.2 |
MS.gene066418.t1 | MTR_1g084980 | 40.000 | 70 | 41 | 1 | 163 | 232 | 465 | 533 | 4.36e-11 | 63.9 |
MS.gene066418.t1 | MTR_3g449770 | 31.429 | 105 | 70 | 2 | 163 | 267 | 312 | 414 | 5.04e-11 | 63.5 |
MS.gene066418.t1 | MTR_2g098310 | 45.312 | 64 | 35 | 0 | 160 | 223 | 332 | 395 | 8.63e-11 | 62.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene066418.t1 | AT3G57800 | 50.000 | 334 | 120 | 10 | 2 | 294 | 19 | 346 | 9.88e-86 | 263 |
MS.gene066418.t1 | AT2G42300 | 49.057 | 318 | 103 | 10 | 6 | 295 | 20 | 306 | 2.13e-79 | 244 |
MS.gene066418.t1 | AT3G57800 | 43.570 | 381 | 121 | 11 | 2 | 294 | 19 | 393 | 4.26e-76 | 239 |
MS.gene066418.t1 | AT2G42300 | 50.373 | 268 | 88 | 7 | 6 | 245 | 20 | 270 | 6.75e-69 | 216 |
MS.gene066418.t1 | AT1G26260 | 37.736 | 265 | 110 | 8 | 58 | 268 | 67 | 330 | 6.95e-44 | 154 |
MS.gene066418.t1 | AT1G26260 | 37.736 | 265 | 110 | 8 | 58 | 268 | 67 | 330 | 6.95e-44 | 154 |
MS.gene066418.t1 | AT1G26260 | 37.736 | 265 | 110 | 8 | 58 | 268 | 67 | 330 | 6.95e-44 | 154 |
MS.gene066418.t1 | AT1G26260 | 37.736 | 265 | 110 | 8 | 58 | 268 | 67 | 330 | 6.95e-44 | 154 |
MS.gene066418.t1 | AT3G07340 | 41.107 | 253 | 99 | 7 | 73 | 294 | 140 | 373 | 1.86e-43 | 154 |
MS.gene066418.t1 | AT1G26260 | 49.682 | 157 | 69 | 3 | 121 | 268 | 124 | 279 | 2.01e-43 | 152 |
MS.gene066418.t1 | AT1G26260 | 49.367 | 158 | 70 | 3 | 120 | 268 | 152 | 308 | 3.62e-43 | 152 |
MS.gene066418.t1 | AT3G07340 | 41.107 | 253 | 99 | 7 | 73 | 294 | 140 | 373 | 3.75e-43 | 154 |
MS.gene066418.t1 | AT3G23690 | 48.969 | 194 | 82 | 6 | 117 | 295 | 144 | 335 | 2.72e-42 | 150 |
MS.gene066418.t1 | AT1G68920 | 61.538 | 117 | 39 | 2 | 157 | 268 | 299 | 414 | 9.53e-42 | 151 |
MS.gene066418.t1 | AT1G68920 | 61.538 | 117 | 39 | 2 | 157 | 268 | 300 | 415 | 9.98e-42 | 151 |
MS.gene066418.t1 | AT1G68920 | 61.538 | 117 | 39 | 2 | 157 | 268 | 300 | 415 | 9.98e-42 | 151 |
MS.gene066418.t1 | AT1G68920 | 61.538 | 117 | 39 | 2 | 157 | 268 | 300 | 415 | 9.98e-42 | 151 |
MS.gene066418.t1 | AT2G42300 | 43.694 | 222 | 80 | 7 | 6 | 199 | 20 | 224 | 3.73e-40 | 140 |
MS.gene066418.t1 | AT2G42300 | 43.694 | 222 | 80 | 7 | 6 | 199 | 20 | 224 | 4.16e-40 | 140 |
MS.gene066418.t1 | AT2G42300 | 43.694 | 222 | 80 | 7 | 6 | 199 | 20 | 224 | 4.16e-40 | 140 |
MS.gene066418.t1 | AT4G34530 | 56.589 | 129 | 49 | 2 | 153 | 281 | 165 | 286 | 8.81e-40 | 142 |
MS.gene066418.t1 | AT1G10120 | 55.224 | 134 | 56 | 2 | 125 | 255 | 169 | 301 | 1.39e-39 | 142 |
MS.gene066418.t1 | AT1G10120 | 55.224 | 134 | 56 | 2 | 125 | 255 | 169 | 301 | 1.39e-39 | 142 |
MS.gene066418.t1 | AT2G18300 | 44.848 | 165 | 66 | 3 | 122 | 267 | 130 | 288 | 6.03e-39 | 140 |
MS.gene066418.t1 | AT5G48560 | 69.565 | 92 | 27 | 1 | 157 | 247 | 298 | 389 | 2.14e-38 | 141 |
MS.gene066418.t1 | AT5G48560 | 69.565 | 92 | 27 | 1 | 157 | 247 | 298 | 389 | 3.28e-38 | 141 |
MS.gene066418.t1 | AT5G50915 | 45.604 | 182 | 84 | 8 | 114 | 285 | 89 | 265 | 3.85e-38 | 136 |
MS.gene066418.t1 | AT5G50915 | 45.604 | 182 | 84 | 8 | 114 | 285 | 89 | 265 | 3.85e-38 | 136 |
MS.gene066418.t1 | AT5G50915 | 48.780 | 164 | 69 | 8 | 114 | 267 | 89 | 247 | 9.01e-38 | 136 |
MS.gene066418.t1 | AT5G50915 | 48.780 | 164 | 69 | 8 | 114 | 267 | 89 | 247 | 9.01e-38 | 136 |
MS.gene066418.t1 | AT2G18300 | 44.311 | 167 | 66 | 4 | 122 | 267 | 130 | 290 | 2.15e-37 | 136 |
MS.gene066418.t1 | AT4G36540 | 50.000 | 138 | 62 | 3 | 115 | 245 | 89 | 226 | 5.55e-37 | 134 |
MS.gene066418.t1 | AT4G36540 | 49.640 | 139 | 63 | 3 | 115 | 246 | 89 | 227 | 5.71e-37 | 134 |
MS.gene066418.t1 | AT2G18300 | 46.497 | 157 | 59 | 3 | 122 | 259 | 130 | 280 | 5.82e-37 | 135 |
MS.gene066418.t1 | AT1G59640 | 80.000 | 75 | 15 | 0 | 157 | 231 | 133 | 207 | 1.09e-36 | 132 |
MS.gene066418.t1 | AT1G59640 | 67.010 | 97 | 32 | 0 | 157 | 253 | 133 | 229 | 3.80e-36 | 133 |
MS.gene066418.t1 | AT1G18400 | 70.000 | 80 | 24 | 0 | 158 | 237 | 143 | 222 | 2.96e-33 | 123 |
MS.gene066418.t1 | AT1G18400 | 70.000 | 80 | 24 | 0 | 158 | 237 | 143 | 222 | 4.96e-33 | 122 |
MS.gene066418.t1 | AT5G62610 | 73.333 | 75 | 20 | 0 | 157 | 231 | 150 | 224 | 9.59e-33 | 122 |
MS.gene066418.t1 | AT5G62610 | 73.333 | 75 | 20 | 0 | 157 | 231 | 150 | 224 | 9.59e-33 | 122 |
MS.gene066418.t1 | AT1G73830 | 69.620 | 79 | 24 | 0 | 159 | 237 | 146 | 224 | 1.36e-32 | 121 |
MS.gene066418.t1 | AT1G73830 | 69.620 | 79 | 24 | 0 | 159 | 237 | 146 | 224 | 1.41e-32 | 121 |
MS.gene066418.t1 | AT1G25330 | 67.500 | 80 | 26 | 0 | 158 | 237 | 102 | 181 | 2.64e-31 | 117 |
MS.gene066418.t1 | AT2G24260 | 59.091 | 66 | 26 | 1 | 160 | 225 | 35 | 99 | 9.79e-17 | 78.6 |
MS.gene066418.t1 | AT4G30980 | 60.606 | 66 | 25 | 1 | 160 | 225 | 130 | 194 | 1.43e-16 | 79.3 |
MS.gene066418.t1 | AT4G30980 | 60.606 | 66 | 25 | 1 | 160 | 225 | 178 | 242 | 1.85e-16 | 79.3 |
MS.gene066418.t1 | AT2G24260 | 59.091 | 66 | 26 | 1 | 160 | 225 | 138 | 202 | 2.85e-16 | 79.0 |
MS.gene066418.t1 | AT5G58010 | 59.701 | 67 | 26 | 1 | 159 | 225 | 98 | 163 | 2.98e-16 | 78.2 |
MS.gene066418.t1 | AT2G20180 | 39.286 | 112 | 53 | 3 | 117 | 225 | 172 | 271 | 5.34e-15 | 75.5 |
MS.gene066418.t1 | AT2G20180 | 39.286 | 112 | 53 | 3 | 117 | 225 | 172 | 271 | 5.34e-15 | 75.5 |
MS.gene066418.t1 | AT2G20180 | 39.286 | 112 | 53 | 3 | 117 | 225 | 172 | 271 | 5.34e-15 | 75.5 |
MS.gene066418.t1 | AT2G20180 | 39.286 | 112 | 53 | 3 | 117 | 225 | 243 | 342 | 8.24e-15 | 75.1 |
MS.gene066418.t1 | AT2G20180 | 39.286 | 112 | 53 | 3 | 117 | 225 | 243 | 342 | 8.24e-15 | 75.1 |
MS.gene066418.t1 | AT2G20180 | 39.286 | 112 | 53 | 3 | 117 | 225 | 243 | 342 | 8.24e-15 | 75.1 |
MS.gene066418.t1 | AT2G20180 | 39.286 | 112 | 53 | 3 | 117 | 225 | 243 | 342 | 8.24e-15 | 75.1 |
MS.gene066418.t1 | AT2G20180 | 38.532 | 109 | 52 | 3 | 117 | 222 | 243 | 339 | 1.51e-13 | 70.9 |
MS.gene066418.t1 | AT4G28800 | 42.466 | 73 | 41 | 1 | 163 | 235 | 252 | 323 | 1.80e-12 | 68.2 |
MS.gene066418.t1 | AT1G09530 | 44.444 | 63 | 34 | 1 | 163 | 225 | 340 | 401 | 1.66e-11 | 65.1 |
MS.gene066418.t1 | AT1G09530 | 44.444 | 63 | 34 | 1 | 163 | 225 | 340 | 401 | 1.66e-11 | 65.1 |
MS.gene066418.t1 | AT1G09530 | 44.444 | 63 | 34 | 1 | 163 | 225 | 340 | 401 | 1.66e-11 | 65.1 |
MS.gene066418.t1 | AT1G09530 | 44.444 | 63 | 34 | 1 | 163 | 225 | 340 | 401 | 1.66e-11 | 65.1 |
MS.gene066418.t1 | AT1G09530 | 44.444 | 63 | 34 | 1 | 163 | 225 | 340 | 401 | 1.66e-11 | 65.1 |
MS.gene066418.t1 | AT1G09530 | 44.444 | 63 | 34 | 1 | 163 | 225 | 340 | 401 | 1.66e-11 | 65.1 |
MS.gene066418.t1 | AT4G28815 | 36.082 | 97 | 57 | 2 | 163 | 255 | 71 | 166 | 1.83e-11 | 63.5 |
MS.gene066418.t1 | AT4G28790 | 40.278 | 72 | 42 | 1 | 163 | 234 | 274 | 344 | 3.06e-11 | 64.3 |
MS.gene066418.t1 | AT4G28815 | 36.082 | 97 | 57 | 2 | 163 | 255 | 147 | 242 | 6.80e-11 | 62.8 |
Find 82 sgRNAs with CRISPR-Local
Find 342 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTTCCATTGTGTGGAATTTC+TGG | 0.119338 | 1.4:+41726848 | None:intergenic |
TCAAGGTTGAAATCAATTAT+TGG | 0.224458 | 1.4:+41727693 | None:intergenic |
TTCCTTCCTCTTCGCACTCT+TGG | 0.267664 | 1.4:+41731136 | None:intergenic |
TGCATTCCACCAACCACTTT+GGG | 0.284445 | 1.4:-41726792 | MS.gene066418:CDS |
ATCAGGAACAGCATTGGTTT+TGG | 0.289474 | 1.4:-41728347 | MS.gene066418:CDS |
TCCTTCACCTGCGGTAAATT+CGG | 0.303306 | 1.4:+41731221 | None:intergenic |
CAAGGTTGAAATCAATTATT+GGG | 0.303962 | 1.4:+41727694 | None:intergenic |
CTTCACTCGTCGGAGATTAC+CGG | 0.318302 | 1.4:-41731368 | MS.gene066418:CDS |
AAATTTCCTTTACAGATATC+AGG | 0.320893 | 1.4:-41728364 | MS.gene066418:intron |
TATGACTCATCGGCAAATTC+AGG | 0.337138 | 1.4:-41726716 | None:intergenic |
CGGAAGCTCCTCGCCGTTGC+CGG | 0.341941 | 1.4:+41730957 | None:intergenic |
TTTCTGGGGTCATGAAATTA+GGG | 0.358922 | 1.4:+41726753 | None:intergenic |
TTTCAACCTTGACAGCATAT+TGG | 0.387389 | 1.4:-41727682 | MS.gene066418:CDS |
AATGAAACTGTTGCAAGATC+TGG | 0.393018 | 1.4:-41729986 | MS.gene066418:CDS |
ATGCATTCCACCAACCACTT+TGG | 0.397314 | 1.4:-41726793 | MS.gene066418:CDS |
ATCGCCGCCGACGAGAATTC+CGG | 0.408348 | 1.4:-41730976 | MS.gene066418:CDS |
GGAAGGGAAAGTTAAATTAC+CGG | 0.419559 | 1.4:+41731310 | None:intergenic |
GAGTTCGCTGTTTCCGTCGC+CGG | 0.429642 | 1.4:+41731437 | None:intergenic |
CAAGTAAGTGGATAGGGTTT+CGG | 0.444621 | 1.4:+41731338 | None:intergenic |
CGAAGAAATTCAAGGAATCA+TGG | 0.453331 | 1.4:-41731462 | MS.gene066418:CDS |
GACCAAACCTTGTTGCAACC+TGG | 0.459346 | 1.4:+41729961 | None:intergenic |
CATCCACCTTCTTCATTCTC+CGG | 0.464454 | 1.4:+41731191 | None:intergenic |
ACAGCGGGTGAAACTGCGTT+AGG | 0.478912 | 1.4:+41726875 | None:intergenic |
TGCTGTCTGTTTCCATTGTG+TGG | 0.479482 | 1.4:+41726839 | None:intergenic |
CAATTCAACGAAGAAATTCA+AGG | 0.489910 | 1.4:-41731470 | MS.gene066418:CDS |
TTACCCTTTCTGCTAAGCTA+TGG | 0.495150 | 1.4:+41730893 | None:intergenic |
ACCAAACCTTGTTGCAACCT+GGG | 0.495296 | 1.4:+41729962 | None:intergenic |
GAGGAAGGAACGAGAGAAGA+AGG | 0.495426 | 1.4:-41731123 | MS.gene066418:intron |
TCAACCAACGCGGCGTTGGA+AGG | 0.508170 | 1.4:+41731293 | None:intergenic |
AGGAATCATGGCTCCGGCGA+CGG | 0.514735 | 1.4:-41731450 | MS.gene066418:CDS |
GCCGAATTTACCGCAGGTGA+AGG | 0.515187 | 1.4:-41731222 | MS.gene066418:CDS |
TAGCCATAGCTTAGCAGAAA+GGG | 0.520877 | 1.4:-41730896 | MS.gene066418:intron |
TGACGACCTGCGTCGGTGGT+AGG | 0.527445 | 1.4:+41731396 | None:intergenic |
GGAATTTCTGGCCACACAGC+GGG | 0.527591 | 1.4:+41726860 | None:intergenic |
GTGTTGCAAGTAAGTGGATA+GGG | 0.530102 | 1.4:+41731332 | None:intergenic |
TTACCGGTGTTGCAAGTAAG+TGG | 0.533665 | 1.4:+41731326 | None:intergenic |
CTGTTGCAAGATCTGGTCCC+AGG | 0.536713 | 1.4:-41729979 | MS.gene066418:CDS |
ACAGATATCAGGAACAGCAT+TGG | 0.547071 | 1.4:-41728353 | MS.gene066418:intron |
GGTGTTGCAAGTAAGTGGAT+AGG | 0.551563 | 1.4:+41731331 | None:intergenic |
AATTCAAGGAATCATGGCTC+CGG | 0.553332 | 1.4:-41731456 | MS.gene066418:CDS |
CAACCAACGCGGCGTTGGAA+GGG | 0.553760 | 1.4:+41731294 | None:intergenic |
CTGCAGCCAATATGCTGTCA+AGG | 0.553773 | 1.4:+41727676 | None:intergenic |
TTTCCCTTCCAACGCCGCGT+TGG | 0.556664 | 1.4:-41731297 | MS.gene066418:CDS |
CAGCGGGTGAAACTGCGTTA+GGG | 0.566488 | 1.4:+41726876 | None:intergenic |
GCCGACGAGAATTCCGGCAA+CGG | 0.567888 | 1.4:-41730970 | MS.gene066418:CDS |
GAGCTACCGGAGAATGAAGA+AGG | 0.569193 | 1.4:-41731197 | MS.gene066418:CDS |
TTCCAAGAGTGCGAAGAGGA+AGG | 0.571829 | 1.4:-41731138 | MS.gene066418:CDS |
GCAGGTGAAGGATGAGCTAC+CGG | 0.582554 | 1.4:-41731210 | MS.gene066418:CDS |
CATTCTGTAGAGATTGCACA+TGG | 0.585158 | 1.4:+41728311 | None:intergenic |
ACTTCTAAGTTATGACTCAT+CGG | 0.587921 | 1.4:-41726726 | MS.gene066418:CDS |
GCGTTCAACCAACGCGGCGT+TGG | 0.594819 | 1.4:+41731289 | None:intergenic |
GCCGTTGCCGGAATTCTCGT+CGG | 0.595821 | 1.4:+41730969 | None:intergenic |
AGCTTGACGACCTGCGTCGG+TGG | 0.597257 | 1.4:+41731392 | None:intergenic |
ATTGTAGGGAATGTCTCTCA+TGG | 0.599541 | 1.4:-41726909 | MS.gene066418:intron |
GACAGCAATTTCAGCAATCG+TGG | 0.599757 | 1.4:-41726823 | MS.gene066418:CDS |
ATAGCCATAGCTTAGCAGAA+AGG | 0.599793 | 1.4:-41730897 | MS.gene066418:CDS |
CATTCCACCAACCACTTTGG+GGG | 0.604196 | 1.4:-41726790 | MS.gene066418:CDS |
CGAACTCGAACGTGAACGTA+CGG | 0.605120 | 1.4:+41730937 | None:intergenic |
GCATTCCACCAACCACTTTG+GGG | 0.608496 | 1.4:-41726791 | MS.gene066418:CDS |
CGTCAAGCTTCTTCACTCGT+CGG | 0.608581 | 1.4:-41731378 | MS.gene066418:CDS |
GAATTGAATCGACTCGAACG+TGG | 0.610167 | 1.4:+41731487 | None:intergenic |
TGGAATTTCTGGCCACACAG+CGG | 0.611227 | 1.4:+41726859 | None:intergenic |
GCAATCTCTACAGAATGAAG+TGG | 0.617385 | 1.4:-41728305 | MS.gene066418:CDS |
ATCTCTACAGAATGAAGTGG+AGG | 0.623403 | 1.4:-41728302 | MS.gene066418:intron |
TGGATGTGTCTCTGATCCAA+CGG | 0.628322 | 1.4:-41731174 | MS.gene066418:CDS |
TATCCACTTACTTGCAACAC+CGG | 0.633343 | 1.4:-41731329 | MS.gene066418:CDS |
CGAGAATTCCGGCAACGGCG+AGG | 0.633666 | 1.4:-41730965 | MS.gene066418:CDS |
ACGCAGTTTCACCCGCTGTG+TGG | 0.639303 | 1.4:-41726871 | MS.gene066418:CDS |
GTAAGTGGATAGGGTTTCGG+CGG | 0.643388 | 1.4:+41731341 | None:intergenic |
GGCGAAAACGGAGAATCTAG+CGG | 0.653244 | 1.4:+41731265 | None:intergenic |
AAAATCGCCGAATTTACCGC+AGG | 0.653889 | 1.4:-41731228 | MS.gene066418:CDS |
CTACCGGAGAATGAAGAAGG+TGG | 0.653905 | 1.4:-41731194 | MS.gene066418:CDS |
AGAAGCTTGACGACCTGCGT+CGG | 0.658300 | 1.4:+41731389 | None:intergenic |
TGGCCAGAAATTCCACACAA+TGG | 0.658395 | 1.4:-41726851 | MS.gene066418:CDS |
TCTTGACCTACCACCGACGC+AGG | 0.659515 | 1.4:-41731402 | MS.gene066418:CDS |
TCTGGTCCCAGGTTGCAACA+AGG | 0.662336 | 1.4:-41729968 | MS.gene066418:intron |
CGAATTCCAAGAGTGCGAAG+AGG | 0.670718 | 1.4:-41731142 | MS.gene066418:CDS |
GGTAGCTCATCCTTCACCTG+CGG | 0.677655 | 1.4:+41731212 | None:intergenic |
GTTGCCGGAATTCTCGTCGG+CGG | 0.688782 | 1.4:+41730972 | None:intergenic |
CGGTGGTAGGTCAAGAAGTG+CGG | 0.691326 | 1.4:+41731409 | None:intergenic |
GTTCACGTTCGAGTTCGACG+AGG | 0.757130 | 1.4:-41730931 | MS.gene066418:CDS |
AGCGGCGCGTTCAACCAACG+CGG | 0.762532 | 1.4:+41731283 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATATATATATATATATATAT+AGG | + | chr1.4:41727818-41727799 | None:intergenic | 0.0% |
!! | ATATATATATATATATATAT+GGG | - | chr1.4:41727799-41727818 | MS.gene066418:intron | 0.0% |
!! | TATATATATATATATATATA+GGG | + | chr1.4:41727819-41727800 | None:intergenic | 0.0% |
!! | TATATATATATATATATATA+TGG | - | chr1.4:41727800-41727819 | MS.gene066418:intron | 0.0% |
!! | AAGTTAGAAAATAATATAAA+TGG | - | chr1.4:41730335-41730354 | MS.gene066418:intron | 10.0% |
!! | ATAAAAAGTTATGAATTTAA+TGG | + | chr1.4:41727746-41727765 | None:intergenic | 10.0% |
!! | ATATAAATACAATCTAAATA+AGG | + | chr1.4:41729776-41729795 | None:intergenic | 10.0% |
!! | TATAAATACAATCTAAATAA+GGG | + | chr1.4:41729775-41729794 | None:intergenic | 10.0% |
!! | TTAATGTAATAATATATCAT+CGG | - | chr1.4:41727776-41727795 | MS.gene066418:intron | 10.0% |
!!! | AAATAATATCTGAAATTAAA+TGG | + | chr1.4:41731251-41731270 | None:intergenic | 10.0% |
!!! | AATAATTTTATTTTCAAGTA+AGG | - | chr1.4:41729379-41729398 | MS.gene066418:intron | 10.0% |
! | GGGGGGGGGGGGGGGGGGGG+GGG | - | chr1.4:41729629-41729648 | MS.gene066418:intron | 100.0% |
!! | AAAGAAATTATACATAAGAA+GGG | - | chr1.4:41728612-41728631 | MS.gene066418:intron | 15.0% |
!! | AAATAAAAAATTGAGTTTAG+TGG | - | chr1.4:41727605-41727624 | MS.gene066418:intron | 15.0% |
!! | AATCATGTAAATAATGAAAA+TGG | - | chr1.4:41729599-41729618 | MS.gene066418:intron | 15.0% |
!! | AATTAAGGAAATAATTATTG+AGG | + | chr1.4:41729299-41729318 | None:intergenic | 15.0% |
!! | ATCATGTAAATAATGAAAAT+GGG | - | chr1.4:41729600-41729619 | MS.gene066418:intron | 15.0% |
!! | CAAAATTGAAAATATTTCAT+AGG | - | chr1.4:41730384-41730403 | MS.gene066418:intron | 15.0% |
!! | TAAAAATTAAAATGTCAAGA+AGG | + | chr1.4:41730697-41730716 | None:intergenic | 15.0% |
!!! | AGTAAATAAAAGTACTTTTT+GGG | + | chr1.4:41728687-41728706 | None:intergenic | 15.0% |
!!! | ATATTATTTTCTAACTTTCA+AGG | + | chr1.4:41730332-41730351 | None:intergenic | 15.0% |
!!! | ATTTTCATTATTTACATGAT+TGG | + | chr1.4:41729600-41729619 | None:intergenic | 15.0% |
!!! | TAAAACAATGGATTAATTTA+TGG | + | chr1.4:41728848-41728867 | None:intergenic | 15.0% |
!!! | TAGTAAATAAAAGTACTTTT+TGG | + | chr1.4:41728688-41728707 | None:intergenic | 15.0% |
!!! | TTAAGAACTTTAAAAATTAG+TGG | - | chr1.4:41730047-41730066 | MS.gene066418:intron | 15.0% |
!!! | TTTTCTCTTTTATTGAAAAA+AGG | - | chr1.4:41730575-41730594 | MS.gene066418:intron | 15.0% |
!!! | TTTTTTTTTTCTTTCTTCTT+TGG | - | chr1.4:41729338-41729357 | MS.gene066418:intron | 15.0% |
!! | AAAAATATTAATTGATACGG+TGG | - | chr1.4:41727699-41727718 | MS.gene066418:CDS | 20.0% |
!! | AAAAGTTATGAATTTAATGG+TGG | + | chr1.4:41727743-41727762 | None:intergenic | 20.0% |
!! | AAATTAAGAAACCTTAAACA+CGG | - | chr1.4:41729749-41729768 | MS.gene066418:intron | 20.0% |
!! | AATAGTTAAACTCAATTAGA+TGG | + | chr1.4:41730853-41730872 | None:intergenic | 20.0% |
!! | ATTTATGGGATAATGAATAT+AGG | - | chr1.4:41729149-41729168 | MS.gene066418:intron | 20.0% |
!! | CAAAGAAATTATACATAAGA+AGG | - | chr1.4:41728611-41728630 | MS.gene066418:intron | 20.0% |
!! | GGAATTTATTTATTTGTCTT+TGG | - | chr1.4:41730596-41730615 | MS.gene066418:intron | 20.0% |
!! | GTAGCATAAACTTTAAATTA+AGG | + | chr1.4:41729314-41729333 | None:intergenic | 20.0% |
!! | TAGTCTAATAAAACTAAATC+AGG | + | chr1.4:41730765-41730784 | None:intergenic | 20.0% |
!! | TCATGTAAATAATGAAAATG+GGG | - | chr1.4:41729601-41729620 | MS.gene066418:intron | 20.0% |
!! | TGAAGATTAACATCTTAAAA+AGG | + | chr1.4:41728288-41728307 | None:intergenic | 20.0% |
!! | TGTGTATATAACTAAAGTTT+AGG | + | chr1.4:41729276-41729295 | None:intergenic | 20.0% |
!! | TTATTTATTTGTCTTTGGTT+GGG | - | chr1.4:41730601-41730620 | MS.gene066418:intron | 20.0% |
!! | TTCACATATATCTAAAAACT+TGG | + | chr1.4:41728585-41728604 | None:intergenic | 20.0% |
!! | TTTATGGGATAATGAATATA+GGG | - | chr1.4:41729150-41729169 | MS.gene066418:intron | 20.0% |
!! | TTTATTTATTTGTCTTTGGT+TGG | - | chr1.4:41730600-41730619 | MS.gene066418:intron | 20.0% |
!! | TTTCAAAAGATTATATGATG+TGG | - | chr1.4:41727519-41727538 | MS.gene066418:intron | 20.0% |
!!! | AAAGCATGTACTTTAATTTT+TGG | + | chr1.4:41728442-41728461 | None:intergenic | 20.0% |
!!! | AATCCATTGTTTTATGAAAA+AGG | - | chr1.4:41728854-41728873 | MS.gene066418:intron | 20.0% |
!!! | AATGAATTTTTATTAGCAGA+AGG | + | chr1.4:41731280-41731299 | None:intergenic | 20.0% |
!!! | AGTAATATAGTGATTCTTTT+TGG | - | chr1.4:41728822-41728841 | MS.gene066418:intron | 20.0% |
!!! | CTAACATTTTATTCAAAAAG+TGG | - | chr1.4:41728741-41728760 | MS.gene066418:intron | 20.0% |
!!! | CTTTTTGAATAAAATGTTAG+AGG | + | chr1.4:41728741-41728760 | None:intergenic | 20.0% |
!!! | GTAAATACTTTTTTTCTTGA+GGG | - | chr1.4:41730998-41731017 | MS.gene066418:CDS | 20.0% |
!!! | TACTTTAATTTTTGGTGAAA+AGG | + | chr1.4:41728434-41728453 | None:intergenic | 20.0% |
!!! | TCATCAAATTTGTTTTTACT+TGG | - | chr1.4:41730827-41730846 | MS.gene066418:intron | 20.0% |
!!! | TCATTTAGATTGCAAAATTT+TGG | + | chr1.4:41729480-41729499 | None:intergenic | 20.0% |
!!! | TGCAAATTTTTCTACAAAAA+TGG | - | chr1.4:41730217-41730236 | MS.gene066418:intron | 20.0% |
!!! | TGTAAATACTTTTTTTCTTG+AGG | - | chr1.4:41730997-41731016 | MS.gene066418:CDS | 20.0% |
!!! | TTGCACTTAGAATTAATTTT+AGG | - | chr1.4:41727473-41727492 | MS.gene066418:intron | 20.0% |
!!! | TTTTAATTTGATTGTGTTGT+AGG | - | chr1.4:41728180-41728199 | MS.gene066418:intron | 20.0% |
!!! | TTTTATATAACTGACATTCT+AGG | - | chr1.4:41729940-41729959 | MS.gene066418:intron | 20.0% |
!!! | TTTTTTTTTGAAGTACGAAA+GGG | - | chr1.4:41727353-41727372 | MS.gene066418:intron | 20.0% |
!!! | TTTTTTTTTTGAAGTACGAA+AGG | - | chr1.4:41727352-41727371 | MS.gene066418:intron | 20.0% |
! | AAAATTCATTGTGACATTGT+AGG | - | chr1.4:41731290-41731309 | MS.gene066418:CDS | 25.0% |
! | AAATGATGAACATGAAAATG+GGG | - | chr1.4:41730897-41730916 | MS.gene066418:CDS | 25.0% |
! | AAATTCATTGTGACATTGTA+GGG | - | chr1.4:41731291-41731310 | MS.gene066418:CDS | 25.0% |
! | AAATTTCCTTTACAGATATC+AGG | - | chr1.4:41729850-41729869 | MS.gene066418:intron | 25.0% |
! | ACATATATCTAAAAACTTGG+TGG | + | chr1.4:41728582-41728601 | None:intergenic | 25.0% |
! | ACGAACTCAATTGAAAAATT+AGG | - | chr1.4:41727131-41727150 | MS.gene066418:intron | 25.0% |
! | AGAATTTATAACCACTAGTT+AGG | + | chr1.4:41731100-41731119 | None:intergenic | 25.0% |
! | AGACAATTTAGACTAAATCA+TGG | + | chr1.4:41728349-41728368 | None:intergenic | 25.0% |
! | ATAATGTCACATAGAATAAC+AGG | + | chr1.4:41730193-41730212 | None:intergenic | 25.0% |
! | ATCAAGCATGATTTATTAAC+AGG | + | chr1.4:41729445-41729464 | None:intergenic | 25.0% |
! | ATGTAAATAATGAAAATGGG+GGG | - | chr1.4:41729603-41729622 | MS.gene066418:intron | 25.0% |
! | ATTAGTATTTCACTTCCTTA+GGG | + | chr1.4:41729074-41729093 | None:intergenic | 25.0% |
! | ATTTCATAGGATCTTTCTAT+TGG | - | chr1.4:41730397-41730416 | MS.gene066418:intron | 25.0% |
! | CAAGGTTGAAATCAATTATT+GGG | + | chr1.4:41730523-41730542 | None:intergenic | 25.0% |
! | CATCTTAAAAAGGAATGAAA+AGG | + | chr1.4:41728278-41728297 | None:intergenic | 25.0% |
! | CATGTAAATAATGAAAATGG+GGG | - | chr1.4:41729602-41729621 | MS.gene066418:intron | 25.0% |
! | CGAACTCAATTGAAAAATTA+GGG | - | chr1.4:41727132-41727151 | MS.gene066418:intron | 25.0% |
! | GAAATGATGAACATGAAAAT+GGG | - | chr1.4:41730896-41730915 | MS.gene066418:intron | 25.0% |
! | GGTATCTATCAATCATTTAT+GGG | - | chr1.4:41729135-41729154 | MS.gene066418:intron | 25.0% |
! | TAAAAAATTGAGTTTAGTGG+TGG | - | chr1.4:41727608-41727627 | MS.gene066418:intron | 25.0% |
! | TAATGTCACATAGAATAACA+GGG | + | chr1.4:41730192-41730211 | None:intergenic | 25.0% |
! | TAGAGGAATAAAATCTGTTT+AGG | + | chr1.4:41728724-41728743 | None:intergenic | 25.0% |
! | TCAAGGTTGAAATCAATTAT+TGG | + | chr1.4:41730524-41730543 | None:intergenic | 25.0% |
! | TGAAATACTAATCCATCTTT+GGG | - | chr1.4:41729082-41729101 | MS.gene066418:intron | 25.0% |
! | TGAAATGATGAACATGAAAA+TGG | - | chr1.4:41730895-41730914 | MS.gene066418:intron | 25.0% |
! | TGAATTTCTCACTAATTTGA+GGG | - | chr1.4:41727160-41727179 | MS.gene066418:intron | 25.0% |
! | TGGTATCTATCAATCATTTA+TGG | - | chr1.4:41729134-41729153 | MS.gene066418:intron | 25.0% |
! | TTTGAAGGATCAGATAAATA+CGG | + | chr1.4:41730091-41730110 | None:intergenic | 25.0% |
! | TTTGTAGTACAGGATAATTA+AGG | - | chr1.4:41728900-41728919 | MS.gene066418:intron | 25.0% |
!! | AAACTTGGTGGTTTATTTAA+TGG | + | chr1.4:41728570-41728589 | None:intergenic | 25.0% |
!! | AAAGACACAATAGTACTTTT+AGG | + | chr1.4:41728372-41728391 | None:intergenic | 25.0% |
!! | AAGAAACCATAACTTTTAGA+AGG | - | chr1.4:41729179-41729198 | MS.gene066418:intron | 25.0% |
!! | AATGTAATAGAGTACTTAAC+AGG | - | chr1.4:41731025-41731044 | MS.gene066418:intron | 25.0% |
!! | ATATTGCCTTCTAAAAGTTA+TGG | + | chr1.4:41729188-41729207 | None:intergenic | 25.0% |
!! | TATCTGAAATTAAATGGAGA+AGG | + | chr1.4:41731245-41731264 | None:intergenic | 25.0% |
!!! | TAAAAGTACTATTGTGTCTT+TGG | - | chr1.4:41728371-41728390 | MS.gene066418:intron | 25.0% |
!!! | TGTCCTTTTTCATAAAACAA+TGG | + | chr1.4:41728860-41728879 | None:intergenic | 25.0% |
!!! | TTGTTACTTTTTAGTTACCA+AGG | - | chr1.4:41731136-41731155 | MS.gene066418:CDS | 25.0% |
!!! | TTTTAATTAGAATACTCCGA+CGG | + | chr1.4:41727583-41727602 | None:intergenic | 25.0% |
!!! | TTTTTTTCTTTCTTCTTTGG+TGG | - | chr1.4:41729341-41729360 | MS.gene066418:intron | 25.0% |
AAATGTGATTTCGATCTCAT+TGG | - | chr1.4:41730452-41730471 | MS.gene066418:intron | 30.0% | |
ACACCTTCATAAAAAGTAGT+TGG | + | chr1.4:41727943-41727962 | None:intergenic | 30.0% | |
ACAGAGAAAAATATACGTCA+TGG | - | chr1.4:41728877-41728896 | MS.gene066418:intron | 30.0% | |
ACCAAACAATAAACCTAACT+GGG | - | chr1.4:41729210-41729229 | MS.gene066418:intron | 30.0% | |
ACTATTGTGTCTTTGGATTA+TGG | - | chr1.4:41728378-41728397 | MS.gene066418:intron | 30.0% | |
ACTTCTAAGTTATGACTCAT+CGG | - | chr1.4:41731488-41731507 | MS.gene066418:CDS | 30.0% | |
AGGAATAAAATCTGTTTAGG+AGG | + | chr1.4:41728721-41728740 | None:intergenic | 30.0% | |
AGTTATGAATTTAATGGTGG+TGG | + | chr1.4:41727740-41727759 | None:intergenic | 30.0% | |
ATAAAAGACACCTTCACAAA+AGG | + | chr1.4:41727888-41727907 | None:intergenic | 30.0% | |
ATGAATAACTCTAACCAATG+TGG | + | chr1.4:41730811-41730830 | None:intergenic | 30.0% | |
ATTCTTCTAAGTTTCCACAT+TGG | - | chr1.4:41730794-41730813 | MS.gene066418:intron | 30.0% | |
CAATTCAACGAAGAAATTCA+AGG | - | chr1.4:41726744-41726763 | MS.gene066418:CDS | 30.0% | |
CATAAGAAGGGAAATAGTAT+TGG | - | chr1.4:41728624-41728643 | MS.gene066418:intron | 30.0% | |
CTATTGTGTCTTTGGATTAT+GGG | - | chr1.4:41728379-41728398 | MS.gene066418:intron | 30.0% | |
CTGAATTTCTCACTAATTTG+AGG | - | chr1.4:41727159-41727178 | MS.gene066418:intron | 30.0% | |
CTGGTATATGGAATAGAAAA+GGG | - | chr1.4:41731166-41731185 | MS.gene066418:CDS | 30.0% | |
CTTACAAAGTTACAAGTTAG+TGG | - | chr1.4:41728653-41728672 | MS.gene066418:intron | 30.0% | |
GATTAGTATTTCACTTCCTT+AGG | + | chr1.4:41729075-41729094 | None:intergenic | 30.0% | |
GTGAAATACTAATCCATCTT+TGG | - | chr1.4:41729081-41729100 | MS.gene066418:intron | 30.0% | |
GTTATGAATTTAATGGTGGT+GGG | + | chr1.4:41727739-41727758 | None:intergenic | 30.0% | |
GTTTGTCAATTGTCAATATC+AGG | - | chr1.4:41729572-41729591 | MS.gene066418:intron | 30.0% | |
TACCAAACAATAAACCTAAC+TGG | - | chr1.4:41729209-41729228 | MS.gene066418:intron | 30.0% | |
TATTGTGTCTTTGGATTATG+GGG | - | chr1.4:41728380-41728399 | MS.gene066418:intron | 30.0% | |
TGTAAATAATGAAAATGGGG+GGG | - | chr1.4:41729604-41729623 | MS.gene066418:intron | 30.0% | |
TGTTGTTGAATCTTCAAAAC+TGG | - | chr1.4:41729515-41729534 | MS.gene066418:intron | 30.0% | |
TTAGTATTTCACTTCCTTAG+GGG | + | chr1.4:41729073-41729092 | None:intergenic | 30.0% | |
TTGAAGGATCAGATAAATAC+GGG | + | chr1.4:41730090-41730109 | None:intergenic | 30.0% | |
! | AACTTAGAAGTGAGTTTTCT+GGG | + | chr1.4:41731479-41731498 | None:intergenic | 30.0% |
! | ATGATGTGGCAGATTTTTAT+TGG | - | chr1.4:41727533-41727552 | MS.gene066418:intron | 30.0% |
! | CTAACTTGTAACTTTGTAAG+AGG | + | chr1.4:41728653-41728672 | None:intergenic | 30.0% |
! | GCAGATTTTATCAATGAAAC+TGG | - | chr1.4:41730487-41730506 | MS.gene066418:intron | 30.0% |
! | GTGTTGATACATGTATTCAT+GGG | - | chr1.4:41729046-41729065 | MS.gene066418:intron | 30.0% |
! | TAACTTAGAAGTGAGTTTTC+TGG | + | chr1.4:41731480-41731499 | None:intergenic | 30.0% |
! | TGTGTTGATACATGTATTCA+TGG | - | chr1.4:41729045-41729064 | MS.gene066418:intron | 30.0% |
!! | AATAGCTTTGAATCAAATCG+TGG | + | chr1.4:41729712-41729731 | None:intergenic | 30.0% |
!! | CTTGGCTCTAAAAATATTTG+AGG | - | chr1.4:41730654-41730673 | MS.gene066418:intron | 30.0% |
!! | TCAGATTATTTTACCCGTAT+TGG | + | chr1.4:41729663-41729682 | None:intergenic | 30.0% |
!!! | ACACCAACTACTTTTTATGA+AGG | - | chr1.4:41727937-41727956 | MS.gene066418:intron | 30.0% |
AAAATTGAGTTTAGTGGTGG+TGG | - | chr1.4:41727611-41727630 | MS.gene066418:intron | 35.0% | |
AAAGTGAAAATCACACCTTG+AGG | - | chr1.4:41727986-41728005 | MS.gene066418:intron | 35.0% | |
AAATTAGGCAATGTGACGAT+AGG | + | chr1.4:41730251-41730270 | None:intergenic | 35.0% | |
AATCTGTTTAGGAGGATTGT+AGG | + | chr1.4:41728713-41728732 | None:intergenic | 35.0% | |
AATGAAACTGTTGCAAGATC+TGG | - | chr1.4:41728228-41728247 | MS.gene066418:intron | 35.0% | |
ACCCAGTTAGGTTTATTGTT+TGG | + | chr1.4:41729214-41729233 | None:intergenic | 35.0% | |
AGTTCTTAAGCACTATCTAC+AGG | + | chr1.4:41730036-41730055 | None:intergenic | 35.0% | |
ATGGGATAATGAATATAGGG+TGG | - | chr1.4:41729153-41729172 | MS.gene066418:intron | 35.0% | |
ATTTGATTGTGTTGTAGGCT+AGG | - | chr1.4:41728185-41728204 | MS.gene066418:intron | 35.0% | |
CACCTTCATAAAAAGTAGTG+TGG | + | chr1.4:41728031-41728050 | None:intergenic | 35.0% | |
CGAAGAAATTCAAGGAATCA+TGG | - | chr1.4:41726752-41726771 | MS.gene066418:CDS | 35.0% | |
GATTCAACAACAAATGATGC+TGG | + | chr1.4:41729507-41729526 | None:intergenic | 35.0% | |
GCTGGTATATGGAATAGAAA+AGG | - | chr1.4:41731165-41731184 | MS.gene066418:CDS | 35.0% | |
GGAAGGGAAAGTTAAATTAC+CGG | + | chr1.4:41726907-41726926 | None:intergenic | 35.0% | |
GTAAATAATGAAAATGGGGG+GGG | - | chr1.4:41729605-41729624 | MS.gene066418:intron | 35.0% | |
GTGGTCGAACATACTTATAA+TGG | + | chr1.4:41729693-41729712 | None:intergenic | 35.0% | |
GTTACCATCAACACTTTGTT+TGG | - | chr1.4:41729114-41729133 | MS.gene066418:intron | 35.0% | |
TAAGTCAGAAAGCCAAAGAA+AGG | + | chr1.4:41728941-41728960 | None:intergenic | 35.0% | |
TATCGTCACATTGCCTAATT+TGG | - | chr1.4:41730250-41730269 | MS.gene066418:intron | 35.0% | |
TGAAAGGGAATTATTCTAGC+TGG | - | chr1.4:41728999-41729018 | MS.gene066418:intron | 35.0% | |
TGAAGGATCAGATAAATACG+GGG | + | chr1.4:41730089-41730108 | None:intergenic | 35.0% | |
TGGGATAATGAATATAGGGT+GGG | - | chr1.4:41729154-41729173 | MS.gene066418:intron | 35.0% | |
TTAAATGGAGAAGGCTGAAT+TGG | + | chr1.4:41731236-41731255 | None:intergenic | 35.0% | |
TTCTAGACTTCTGCATTGTT+TGG | - | chr1.4:41730296-41730315 | MS.gene066418:intron | 35.0% | |
TTTCAACCTTGACAGCATAT+TGG | - | chr1.4:41730532-41730551 | MS.gene066418:intron | 35.0% | |
TTTCCATTGTGTGGAATTTC+TGG | + | chr1.4:41731369-41731388 | None:intergenic | 35.0% | |
TTTCTATTGGAACACATTGC+AGG | - | chr1.4:41730410-41730429 | MS.gene066418:intron | 35.0% | |
! | ACTTAGAAGTGAGTTTTCTG+GGG | + | chr1.4:41731478-41731497 | None:intergenic | 35.0% |
! | ATACTAATCCATCTTTGGGA+AGG | - | chr1.4:41729086-41729105 | MS.gene066418:intron | 35.0% |
! | ATAGAAGACACCTTTTGTGA+AGG | - | chr1.4:41727875-41727894 | MS.gene066418:intron | 35.0% |
! | ATGCGATGTGTATGATTTTG+TGG | - | chr1.4:41731196-41731215 | MS.gene066418:CDS | 35.0% |
! | ATGTTCCTAAGCACTTTTGA+AGG | + | chr1.4:41730106-41730125 | None:intergenic | 35.0% |
! | CGATTTTGTGGAATTTTCTC+CGG | + | chr1.4:41726973-41726992 | None:intergenic | 35.0% |
! | CTGAACTACATGTACTTTTC+TGG | - | chr1.4:41730631-41730650 | MS.gene066418:intron | 35.0% |
! | GTGAAAAGGTGATAATGACA+TGG | + | chr1.4:41728420-41728439 | None:intergenic | 35.0% |
! | TTTTATCAAGTCACACCTCA+AGG | + | chr1.4:41728004-41728023 | None:intergenic | 35.0% |
!! | GATACCAAACAAAGTGTTGA+TGG | + | chr1.4:41729121-41729140 | None:intergenic | 35.0% |
!! | TAAGGCTTTTGAGTGTTTGT+GGG | - | chr1.4:41729397-41729416 | MS.gene066418:intron | 35.0% |
!! | TCTTTGGCTTTCTGACTTAT+TGG | - | chr1.4:41728942-41728961 | MS.gene066418:intron | 35.0% |
!! | TTTCTGGGGTCATGAAATTA+GGG | + | chr1.4:41731464-41731483 | None:intergenic | 35.0% |
!!! | ACTTTTTAGTTACCAAGGTC+TGG | - | chr1.4:41731141-41731160 | MS.gene066418:CDS | 35.0% |
!!! | CACCACACTACTTTTTATGA+AGG | - | chr1.4:41728026-41728045 | MS.gene066418:intron | 35.0% |
!!! | CTTTTTAGTTACCAAGGTCT+GGG | - | chr1.4:41731142-41731161 | MS.gene066418:CDS | 35.0% |
!!! | TTTTCTGGGGTCATGAAATT+AGG | + | chr1.4:41731465-41731484 | None:intergenic | 35.0% |
!!! | TTTTTAGTTACCAAGGTCTG+GGG | - | chr1.4:41731143-41731162 | MS.gene066418:CDS | 35.0% |
AAAAATGCCCATGTTGCAGT+GGG | + | chr1.4:41728491-41728510 | None:intergenic | 40.0% | |
AACAGGTGAAGTTGTATGTG+TGG | + | chr1.4:41729428-41729447 | None:intergenic | 40.0% | |
AAGCCAAAGAAAGGAACAAG+AGG | + | chr1.4:41728932-41728951 | None:intergenic | 40.0% | |
AATTCAAGGAATCATGGCTC+CGG | - | chr1.4:41726758-41726777 | MS.gene066418:CDS | 40.0% | |
ACAGATATCAGGAACAGCAT+TGG | - | chr1.4:41729861-41729880 | MS.gene066418:intron | 40.0% | |
AGCCAAAGAAAGGAACAAGA+GGG | + | chr1.4:41728931-41728950 | None:intergenic | 40.0% | |
ATAGCCATAGCTTAGCAGAA+AGG | - | chr1.4:41727317-41727336 | MS.gene066418:intron | 40.0% | |
ATCTCTACAGAATGAAGTGG+AGG | - | chr1.4:41729912-41729931 | MS.gene066418:intron | 40.0% | |
ATTGTAGGGAATGTCTCTCA+TGG | - | chr1.4:41731305-41731324 | MS.gene066418:CDS | 40.0% | |
CAAGTAAGTGGATAGGGTTT+CGG | + | chr1.4:41726879-41726898 | None:intergenic | 40.0% | |
CAGATAAATACGGGGAAGAA+AGG | + | chr1.4:41730081-41730100 | None:intergenic | 40.0% | |
CATTCTGTAGAGATTGCACA+TGG | + | chr1.4:41729906-41729925 | None:intergenic | 40.0% | |
CTAAATAAGGGCCGTGTTTA+AGG | + | chr1.4:41729763-41729782 | None:intergenic | 40.0% | |
CTACAGAGTGGAATGAATGA+CGG | + | chr1.4:41730949-41730968 | None:intergenic | 40.0% | |
GAAGCATGAAATTTCAAGCC+TGG | + | chr1.4:41730279-41730298 | None:intergenic | 40.0% | |
GCAATCTCTACAGAATGAAG+TGG | - | chr1.4:41729909-41729928 | MS.gene066418:intron | 40.0% | |
GCTGTTCCTGATATCTGTAA+AGG | + | chr1.4:41729859-41729878 | None:intergenic | 40.0% | |
GCTTAGATCATCCTAACTAG+TGG | - | chr1.4:41731086-41731105 | MS.gene066418:intron | 40.0% | |
GTGTTGCAAGTAAGTGGATA+GGG | + | chr1.4:41726885-41726904 | None:intergenic | 40.0% | |
TAGCCATAGCTTAGCAGAAA+GGG | - | chr1.4:41727318-41727337 | MS.gene066418:intron | 40.0% | |
TATCCACTTACTTGCAACAC+CGG | - | chr1.4:41726885-41726904 | MS.gene066418:CDS | 40.0% | |
TATGACTCATCGGCAAATTC+AGG | - | chr1.4:41731498-41731517 | MS.gene066418:CDS | 40.0% | |
TCATACGCACAACTGTAGAT+AGG | + | chr1.4:41730737-41730756 | None:intergenic | 40.0% | |
TGAAATGCTGAAACCCAGTT+AGG | + | chr1.4:41729226-41729245 | None:intergenic | 40.0% | |
TTACCCTTTCTGCTAAGCTA+TGG | + | chr1.4:41727324-41727343 | None:intergenic | 40.0% | |
! | GAATTATTCTAGCTGGACTC+TGG | - | chr1.4:41729006-41729025 | MS.gene066418:intron | 40.0% |
! | GTAAAGTGTCTTTACACCGT+CGG | - | chr1.4:41727564-41727583 | MS.gene066418:intron | 40.0% |
! | TACGTCATGGTTTGTAGTAC+AGG | - | chr1.4:41728890-41728909 | MS.gene066418:intron | 40.0% |
! | TTTCTTCTTTGGTGGTCTCA+GGG | - | chr1.4:41729349-41729368 | MS.gene066418:intron | 40.0% |
!! | AAGGCTTTTGAGTGTTTGTG+GGG | - | chr1.4:41729398-41729417 | MS.gene066418:intron | 40.0% |
!! | ATTTAATGGTGGTGGGTTGA+CGG | + | chr1.4:41727732-41727751 | None:intergenic | 40.0% |
!! | CTGATCCTTCAAAAGTGCTT+AGG | - | chr1.4:41730098-41730117 | MS.gene066418:intron | 40.0% |
!! | GTAAGGCTTTTGAGTGTTTG+TGG | - | chr1.4:41729396-41729415 | MS.gene066418:intron | 40.0% |
!! | TGGACTCTGGCTTTAACAAT+TGG | - | chr1.4:41729019-41729038 | MS.gene066418:intron | 40.0% |
!!! | ATCAGGAACAGCATTGGTTT+TGG | - | chr1.4:41729867-41729886 | MS.gene066418:intron | 40.0% |
!!! | CTACATGTACTTTTCTGGCT+TGG | - | chr1.4:41730636-41730655 | MS.gene066418:intron | 40.0% |
AAAATCGCCGAATTTACCGC+AGG | - | chr1.4:41726986-41727005 | MS.gene066418:intron | 45.0% | |
AACACTGTGTGTGTGATGTG+AGG | + | chr1.4:41728525-41728544 | None:intergenic | 45.0% | |
AACCATCACCTTCCCAAAGA+TGG | + | chr1.4:41729097-41729116 | None:intergenic | 45.0% | |
AATAATGAAAATGGGGGGGG+TGG | - | chr1.4:41729608-41729627 | MS.gene066418:intron | 45.0% | |
ACCAAACCTTGTTGCAACCT+GGG | + | chr1.4:41728255-41728274 | None:intergenic | 45.0% | |
ATAATGAAAATGGGGGGGGT+GGG | - | chr1.4:41729609-41729628 | MS.gene066418:intron | 45.0% | |
ATGCATTCCACCAACCACTT+TGG | - | chr1.4:41731421-41731440 | MS.gene066418:CDS | 45.0% | |
ATGTATTCATGGGTCCCCTA+AGG | - | chr1.4:41729056-41729075 | MS.gene066418:intron | 45.0% | |
CAAAAATGCCCATGTTGCAG+TGG | + | chr1.4:41728492-41728511 | None:intergenic | 45.0% | |
CATCCACCTTCTTCATTCTC+CGG | + | chr1.4:41727026-41727045 | None:intergenic | 45.0% | |
CATTGCCTAATTTGGACTCC+AGG | - | chr1.4:41730258-41730277 | MS.gene066418:intron | 45.0% | |
CGTCATTCATTCCACTCTGT+AGG | - | chr1.4:41730947-41730966 | MS.gene066418:CDS | 45.0% | |
GACAGCAATTTCAGCAATCG+TGG | - | chr1.4:41731391-41731410 | MS.gene066418:CDS | 45.0% | |
GACTTATTGGAGAGACAGAG+AGG | - | chr1.4:41728955-41728974 | MS.gene066418:intron | 45.0% | |
GCCAAAGAAAGGAACAAGAG+GGG | + | chr1.4:41728930-41728949 | None:intergenic | 45.0% | |
TATCATGACAGCCTACAGAG+TGG | + | chr1.4:41730961-41730980 | None:intergenic | 45.0% | |
TATTGGAGAGACAGAGAGGT+GGG | - | chr1.4:41728959-41728978 | MS.gene066418:intron | 45.0% | |
TCAAGCCTGGAGTCCAAATT+AGG | + | chr1.4:41730266-41730285 | None:intergenic | 45.0% | |
TCCCCTCTTGTTCCTTTCTT+TGG | - | chr1.4:41728926-41728945 | MS.gene066418:intron | 45.0% | |
TCCTTCACCTGCGGTAAATT+CGG | + | chr1.4:41726996-41727015 | None:intergenic | 45.0% | |
TCTCATGTTCTGTGAAACGC+AGG | - | chr1.4:41727186-41727205 | MS.gene066418:intron | 45.0% | |
TGCATTCCACCAACCACTTT+GGG | - | chr1.4:41731422-41731441 | MS.gene066418:CDS | 45.0% | |
TGCTGTCTGTTTCCATTGTG+TGG | + | chr1.4:41731378-41731397 | None:intergenic | 45.0% | |
TGGATGTGTCTCTGATCCAA+CGG | - | chr1.4:41727040-41727059 | MS.gene066418:intron | 45.0% | |
TGGCCAGAAATTCCACACAA+TGG | - | chr1.4:41731363-41731382 | MS.gene066418:CDS | 45.0% | |
TTATTGGAGAGACAGAGAGG+TGG | - | chr1.4:41728958-41728977 | MS.gene066418:intron | 45.0% | |
! | ATCCATCTTTGGGAAGGTGA+TGG | - | chr1.4:41729092-41729111 | MS.gene066418:intron | 45.0% |
! | CGGTAAATTCGGCGATTTTG+TGG | + | chr1.4:41726985-41727004 | None:intergenic | 45.0% |
! | CTTTCTTCTTTGGTGGTCTC+AGG | - | chr1.4:41729348-41729367 | MS.gene066418:intron | 45.0% |
! | GAATTCGTGTTTTCGACCGT+TGG | + | chr1.4:41727059-41727078 | None:intergenic | 45.0% |
! | GGAATTTTCTCCGGCGAAAA+CGG | + | chr1.4:41726964-41726983 | None:intergenic | 45.0% |
! | GGTGTTGCAAGTAAGTGGAT+AGG | + | chr1.4:41726886-41726905 | None:intergenic | 45.0% |
! | TTTTCTTCTCTCCCCCAAAG+TGG | + | chr1.4:41731438-41731457 | None:intergenic | 45.0% |
!! | CTGTAGAGCACTTTTCTTGG+TGG | + | chr1.4:41728466-41728485 | None:intergenic | 45.0% |
!! | GAATTGAATCGACTCGAACG+TGG | + | chr1.4:41726730-41726749 | None:intergenic | 45.0% |
!! | GTGCTGTAGAGCACTTTTCT+TGG | + | chr1.4:41728469-41728488 | None:intergenic | 45.0% |
!! | GTTTAGTGGTGGTGGATTGA+CGG | - | chr1.4:41727619-41727638 | MS.gene066418:intron | 45.0% |
!! | TTACCGGTGTTGCAAGTAAG+TGG | + | chr1.4:41726891-41726910 | None:intergenic | 45.0% |
!! | ATTAAAAATATTAATTGATA+CGG | - | chr1.4:41727696-41727715 | MS.gene066418:CDS | 5.0% |
AATGGGGAGAGAGAGAGAGA+TGG | - | chr1.4:41730913-41730932 | MS.gene066418:CDS | 50.0% | |
CATTCCACCAACCACTTTGG+GGG | - | chr1.4:41731424-41731443 | MS.gene066418:CDS | 50.0% | |
CGAACTCGAACGTGAACGTA+CGG | + | chr1.4:41727280-41727299 | None:intergenic | 50.0% | |
CGTCAAGCTTCTTCACTCGT+CGG | - | chr1.4:41726836-41726855 | MS.gene066418:CDS | 50.0% | |
CTACCGGAGAATGAAGAAGG+TGG | - | chr1.4:41727020-41727039 | MS.gene066418:intron | 50.0% | |
CTGCAGCCAATATGCTGTCA+AGG | + | chr1.4:41730541-41730560 | None:intergenic | 50.0% | |
CTTCACTCGTCGGAGATTAC+CGG | - | chr1.4:41726846-41726865 | MS.gene066418:CDS | 50.0% | |
GACCAAACCTTGTTGCAACC+TGG | + | chr1.4:41728256-41728275 | None:intergenic | 50.0% | |
GAGCTACCGGAGAATGAAGA+AGG | - | chr1.4:41727017-41727036 | MS.gene066418:intron | 50.0% | |
GAGGAAGGAACGAGAGAAGA+AGG | - | chr1.4:41727091-41727110 | MS.gene066418:intron | 50.0% | |
GCATTCCACCAACCACTTTG+GGG | - | chr1.4:41731423-41731442 | MS.gene066418:CDS | 50.0% | |
GGCGAAAACGGAGAATCTAG+CGG | + | chr1.4:41726952-41726971 | None:intergenic | 50.0% | |
GTAAGTGGATAGGGTTTCGG+CGG | + | chr1.4:41726876-41726895 | None:intergenic | 50.0% | |
TAATGAAAATGGGGGGGGTG+GGG | - | chr1.4:41729610-41729629 | MS.gene066418:intron | 50.0% | |
TACAGCACCCACTGCAACAT+GGG | - | chr1.4:41728481-41728500 | MS.gene066418:intron | 50.0% | |
TCCCAGGTTGCAACAAGGTT+TGG | - | chr1.4:41728251-41728270 | MS.gene066418:intron | 50.0% | |
TTCCTTCCTCTTCGCACTCT+TGG | + | chr1.4:41727081-41727100 | None:intergenic | 50.0% | |
! | ATAGGGTTTCGGCGGTTTTC+CGG | + | chr1.4:41726868-41726887 | None:intergenic | 50.0% |
! | CGAATTCCAAGAGTGCGAAG+AGG | - | chr1.4:41727072-41727091 | MS.gene066418:intron | 50.0% |
! | GCTAGATTCTCCGTTTTCGC+CGG | - | chr1.4:41726951-41726970 | MS.gene066418:intron | 50.0% |
! | TTCCAAGAGTGCGAAGAGGA+AGG | - | chr1.4:41727076-41727095 | MS.gene066418:intron | 50.0% |
!! | TGGAATTTCTGGCCACACAG+CGG | + | chr1.4:41731358-41731377 | None:intergenic | 50.0% |
AATGAAAATGGGGGGGGTGG+GGG | - | chr1.4:41729611-41729630 | MS.gene066418:intron | 55.0% | |
ACAGCGGGTGAAACTGCGTT+AGG | + | chr1.4:41731342-41731361 | None:intergenic | 55.0% | |
AGAAGCTTGACGACCTGCGT+CGG | + | chr1.4:41726828-41726847 | None:intergenic | 55.0% | |
AGAGACAGAGAGGTGGGTGT+GGG | - | chr1.4:41728965-41728984 | MS.gene066418:intron | 55.0% | |
CAGCGGGTGAAACTGCGTTA+GGG | + | chr1.4:41731341-41731360 | None:intergenic | 55.0% | |
CATATACCAGCCCCAGACCT+TGG | + | chr1.4:41731156-41731175 | None:intergenic | 55.0% | |
CGGTGGTAGGTCAAGAAGTG+CGG | + | chr1.4:41726808-41726827 | None:intergenic | 55.0% | |
CTACAGCACCCACTGCAACA+TGG | - | chr1.4:41728480-41728499 | MS.gene066418:intron | 55.0% | |
CTGTTGCAAGATCTGGTCCC+AGG | - | chr1.4:41728235-41728254 | MS.gene066418:intron | 55.0% | |
CTTCTCTCCCCCAAAGTGGT+TGG | + | chr1.4:41731434-41731453 | None:intergenic | 55.0% | |
GCAGGTGAAGGATGAGCTAC+CGG | - | chr1.4:41727004-41727023 | MS.gene066418:intron | 55.0% | |
GCCGAATTTACCGCAGGTGA+AGG | - | chr1.4:41726992-41727011 | MS.gene066418:intron | 55.0% | |
GGTAGCTCATCCTTCACCTG+CGG | + | chr1.4:41727005-41727024 | None:intergenic | 55.0% | |
TCTGGTCCCAGGTTGCAACA+AGG | - | chr1.4:41728246-41728265 | MS.gene066418:intron | 55.0% | |
! | CAAGGTCTGGGGCTGGTATA+TGG | - | chr1.4:41731154-41731173 | MS.gene066418:CDS | 55.0% |
! | GTTCACGTTCGAGTTCGACG+AGG | - | chr1.4:41727283-41727302 | MS.gene066418:intron | 55.0% |
! | TAGTTACCAAGGTCTGGGGC+TGG | - | chr1.4:41731147-41731166 | MS.gene066418:CDS | 55.0% |
!! | GGAATTTCTGGCCACACAGC+GGG | + | chr1.4:41731357-41731376 | None:intergenic | 55.0% |
ACGCAGTTTCACCCGCTGTG+TGG | - | chr1.4:41731343-41731362 | MS.gene066418:CDS | 60.0% | |
AGGAATCATGGCTCCGGCGA+CGG | - | chr1.4:41726764-41726783 | MS.gene066418:CDS | 60.0% | |
ATCGCCGCCGACGAGAATTC+CGG | - | chr1.4:41727238-41727257 | MS.gene066418:intron | 60.0% | |
ATGAAAATGGGGGGGGTGGG+GGG | - | chr1.4:41729612-41729631 | MS.gene066418:intron | 60.0% | |
CTCTCCCCCAAAGTGGTTGG+TGG | + | chr1.4:41731431-41731450 | None:intergenic | 60.0% | |
GAGAGACAGAGAGGTGGGTG+TGG | - | chr1.4:41728964-41728983 | MS.gene066418:intron | 60.0% | |
GCCGACGAGAATTCCGGCAA+CGG | - | chr1.4:41727244-41727263 | MS.gene066418:intron | 60.0% | |
GCCGTTGCCGGAATTCTCGT+CGG | + | chr1.4:41727248-41727267 | None:intergenic | 60.0% | |
GTTGCCGGAATTCTCGTCGG+CGG | + | chr1.4:41727245-41727264 | None:intergenic | 60.0% | |
TCTTGACCTACCACCGACGC+AGG | - | chr1.4:41726812-41726831 | MS.gene066418:CDS | 60.0% | |
TGGGCGTGTGGGGTGTGAAA+GGG | - | chr1.4:41728984-41729003 | MS.gene066418:intron | 60.0% | |
TTTCCCTTCCAACGCCGCGT+TGG | - | chr1.4:41726917-41726936 | MS.gene066418:intron | 60.0% | |
! | CAACCAACGCGGCGTTGGAA+GGG | + | chr1.4:41726923-41726942 | None:intergenic | 60.0% |
! | GAGTTCGCTGTTTCCGTCGC+CGG | + | chr1.4:41726780-41726799 | None:intergenic | 60.0% |
! | TCAACCAACGCGGCGTTGGA+AGG | + | chr1.4:41726924-41726943 | None:intergenic | 60.0% |
!! | GGGGGGGGGTGTTACCAATA+CGG | - | chr1.4:41729646-41729665 | MS.gene066418:intron | 60.0% |
!! | GGGGGGGGTGTTACCAATAC+GGG | - | chr1.4:41729647-41729666 | MS.gene066418:intron | 60.0% |
AGAGGTGGGTGTGGGCGTGT+GGG | - | chr1.4:41728973-41728992 | MS.gene066418:intron | 65.0% | |
AGCGGCGCGTTCAACCAACG+CGG | + | chr1.4:41726934-41726953 | None:intergenic | 65.0% | |
AGCTTGACGACCTGCGTCGG+TGG | + | chr1.4:41726825-41726844 | None:intergenic | 65.0% | |
CGAGAATTCCGGCAACGGCG+AGG | - | chr1.4:41727249-41727268 | MS.gene066418:intron | 65.0% | |
GCGTTCAACCAACGCGGCGT+TGG | + | chr1.4:41726928-41726947 | None:intergenic | 65.0% | |
GTGGGCGTGTGGGGTGTGAA+AGG | - | chr1.4:41728983-41729002 | MS.gene066418:intron | 65.0% | |
TGAAAATGGGGGGGGTGGGG+GGG | - | chr1.4:41729613-41729632 | MS.gene066418:intron | 65.0% | |
! | TGACGACCTGCGTCGGTGGT+AGG | + | chr1.4:41726821-41726840 | None:intergenic | 65.0% |
AAAATGGGGGGGGTGGGGGG+GGG | - | chr1.4:41729615-41729634 | MS.gene066418:intron | 70.0% | |
CGGAAGCTCCTCGCCGTTGC+CGG | + | chr1.4:41727260-41727279 | None:intergenic | 70.0% | |
GAAAATGGGGGGGGTGGGGG+GGG | - | chr1.4:41729614-41729633 | MS.gene066418:intron | 70.0% | |
GAGAGGTGGGTGTGGGCGTG+TGG | - | chr1.4:41728972-41728991 | MS.gene066418:intron | 70.0% | |
GAGGTGGGTGTGGGCGTGTG+GGG | - | chr1.4:41728974-41728993 | MS.gene066418:intron | 70.0% | |
AAATGGGGGGGGTGGGGGGG+GGG | - | chr1.4:41729616-41729635 | MS.gene066418:intron | 75.0% | |
! | AATGGGGGGGGTGGGGGGGG+GGG | - | chr1.4:41729617-41729636 | MS.gene066418:intron | 80.0% |
! | ATGGGGGGGGTGGGGGGGGG+GGG | - | chr1.4:41729618-41729637 | MS.gene066418:intron | 85.0% |
! | TGGGGGGGGTGGGGGGGGGG+GGG | - | chr1.4:41729619-41729638 | MS.gene066418:intron | 90.0% |
! | GGGGGGGGTGGGGGGGGGGG+GGG | - | chr1.4:41729620-41729639 | MS.gene066418:intron | 95.0% |
! | GGGGGGGTGGGGGGGGGGGG+GGG | - | chr1.4:41729621-41729640 | MS.gene066418:intron | 95.0% |
! | GGGGGGTGGGGGGGGGGGGG+GGG | - | chr1.4:41729622-41729641 | MS.gene066418:intron | 95.0% |
! | GGGGGTGGGGGGGGGGGGGG+GGG | - | chr1.4:41729623-41729642 | MS.gene066418:intron | 95.0% |
! | GGGGTGGGGGGGGGGGGGGG+GGG | - | chr1.4:41729624-41729643 | MS.gene066418:intron | 95.0% |
! | GGGTGGGGGGGGGGGGGGGG+GGG | - | chr1.4:41729625-41729644 | MS.gene066418:intron | 95.0% |
! | GGTGGGGGGGGGGGGGGGGG+GGG | - | chr1.4:41729626-41729645 | MS.gene066418:intron | 95.0% |
! | GTGGGGGGGGGGGGGGGGGG+GGG | - | chr1.4:41729627-41729646 | MS.gene066418:intron | 95.0% |
! | TGGGGGGGGGGGGGGGGGGG+GGG | - | chr1.4:41729628-41729647 | MS.gene066418:intron | 95.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.4 | gene | 41726717 | 41731519 | 41726717 | ID=MS.gene066418 |
chr1.4 | mRNA | 41726717 | 41731519 | 41726717 | ID=MS.gene066418.t1;Parent=MS.gene066418 |
chr1.4 | exon | 41731124 | 41731519 | 41731124 | ID=MS.gene066418.t1.exon1;Parent=MS.gene066418.t1 |
chr1.4 | CDS | 41731124 | 41731519 | 41731124 | ID=cds.MS.gene066418.t1;Parent=MS.gene066418.t1 |
chr1.4 | exon | 41730897 | 41731028 | 41730897 | ID=MS.gene066418.t1.exon2;Parent=MS.gene066418.t1 |
chr1.4 | CDS | 41730897 | 41731028 | 41730897 | ID=cds.MS.gene066418.t1;Parent=MS.gene066418.t1 |
chr1.4 | exon | 41729969 | 41730034 | 41729969 | ID=MS.gene066418.t1.exon3;Parent=MS.gene066418.t1 |
chr1.4 | CDS | 41729969 | 41730034 | 41729969 | ID=cds.MS.gene066418.t1;Parent=MS.gene066418.t1 |
chr1.4 | exon | 41728303 | 41728371 | 41728303 | ID=MS.gene066418.t1.exon4;Parent=MS.gene066418.t1 |
chr1.4 | CDS | 41728303 | 41728371 | 41728303 | ID=cds.MS.gene066418.t1;Parent=MS.gene066418.t1 |
chr1.4 | exon | 41727674 | 41727745 | 41727674 | ID=MS.gene066418.t1.exon5;Parent=MS.gene066418.t1 |
chr1.4 | CDS | 41727674 | 41727745 | 41727674 | ID=cds.MS.gene066418.t1;Parent=MS.gene066418.t1 |
chr1.4 | exon | 41726717 | 41726924 | 41726717 | ID=MS.gene066418.t1.exon6;Parent=MS.gene066418.t1 |
chr1.4 | CDS | 41726717 | 41726924 | 41726717 | ID=cds.MS.gene066418.t1;Parent=MS.gene066418.t1 |
Gene Sequence |
Protein sequence |