Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066429.t1 | XP_013444827.1 | 94.2 | 873 | 50 | 1 | 1 | 873 | 1 | 872 | 0.00E+00 | 1592 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066429.t1 | A0A072TN99 | 94.2 | 873 | 50 | 1 | 1 | 873 | 1 | 872 | 0.0e+00 | 1592.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene060348 | MS.gene066429 | 0.814241 | 1.70E-51 | -1.69E-46 |
| MS.gene060353 | MS.gene066429 | 0.814376 | 1.59E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066429.t1 | MTR_8g030750 | 95.309 | 874 | 40 | 1 | 1 | 874 | 1 | 873 | 0.0 | 1698 |
| MS.gene066429.t1 | MTR_8g030750 | 94.887 | 665 | 33 | 1 | 1 | 665 | 1 | 664 | 0.0 | 1266 |
| MS.gene066429.t1 | MTR_7g077740 | 54.113 | 924 | 346 | 14 | 1 | 859 | 1 | 911 | 0.0 | 874 |
| MS.gene066429.t1 | MTR_7g078520 | 67.241 | 58 | 19 | 0 | 794 | 851 | 17 | 74 | 6.40e-24 | 98.6 |
| MS.gene066429.t1 | MTR_1g047660 | 30.198 | 202 | 115 | 9 | 671 | 850 | 648 | 845 | 7.86e-14 | 76.3 |
| MS.gene066429.t1 | MTR_2g096870 | 30.814 | 172 | 100 | 7 | 695 | 851 | 524 | 691 | 2.82e-13 | 74.3 |
| MS.gene066429.t1 | MTR_2g096870 | 30.814 | 172 | 100 | 7 | 695 | 851 | 562 | 729 | 3.04e-13 | 74.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066429.t1 | AT4G00440 | 32.159 | 880 | 465 | 29 | 1 | 836 | 1 | 792 | 1.22e-104 | 343 |
| MS.gene066429.t1 | AT4G00440 | 32.159 | 880 | 465 | 29 | 1 | 836 | 1 | 792 | 1.23e-104 | 343 |
| MS.gene066429.t1 | AT4G00440 | 32.159 | 880 | 465 | 29 | 1 | 836 | 1 | 792 | 1.23e-104 | 343 |
| MS.gene066429.t1 | AT4G00440 | 32.159 | 880 | 465 | 29 | 1 | 836 | 1 | 792 | 1.53e-104 | 343 |
| MS.gene066429.t1 | AT4G00440 | 32.159 | 880 | 465 | 29 | 1 | 836 | 1 | 792 | 1.53e-104 | 343 |
| MS.gene066429.t1 | AT2G45900 | 33.730 | 504 | 275 | 15 | 372 | 853 | 240 | 706 | 3.30e-65 | 233 |
| MS.gene066429.t1 | AT2G45900 | 33.730 | 504 | 275 | 15 | 372 | 853 | 240 | 706 | 3.30e-65 | 233 |
| MS.gene066429.t1 | AT2G45900 | 33.730 | 504 | 275 | 15 | 372 | 853 | 240 | 706 | 3.30e-65 | 233 |
| MS.gene066429.t1 | AT3G61380 | 29.356 | 637 | 377 | 18 | 240 | 853 | 115 | 701 | 4.04e-58 | 212 |
| MS.gene066429.t1 | AT3G61380 | 29.356 | 637 | 377 | 18 | 240 | 853 | 115 | 701 | 4.04e-58 | 212 |
| MS.gene066429.t1 | AT3G61380 | 29.356 | 637 | 377 | 18 | 240 | 853 | 115 | 701 | 4.04e-58 | 212 |
| MS.gene066429.t1 | AT1G01695 | 28.092 | 477 | 216 | 20 | 374 | 841 | 56 | 414 | 7.11e-28 | 118 |
Find 161 sgRNAs with CRISPR-Local
Find 266 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAACAACATGCTTCTGTTTC+TGG | 0.092808 | 8.1:+72143777 | None:intergenic |
| TATCGCTGATGATTTAAATT+TGG | 0.154482 | 8.1:-72143963 | MS.gene066429:CDS |
| ATGAAGAAATGATCTTTATT+AGG | 0.233540 | 8.1:+72143155 | None:intergenic |
| TATTATTCTTCCTAGGGTTT+TGG | 0.237996 | 8.1:+72142926 | None:intergenic |
| CATTTCAATACAAGTGGATT+TGG | 0.258773 | 8.1:+72143590 | None:intergenic |
| CTTCCTTATCAACGTGAATT+AGG | 0.259599 | 8.1:+72142757 | None:intergenic |
| TGATCCTCCCAATCCCTTCT+AGG | 0.262207 | 8.1:+72142867 | None:intergenic |
| ATCGCTGATGATTTAAATTT+GGG | 0.278717 | 8.1:-72143962 | MS.gene066429:CDS |
| TTGTCAATCCAGAGGCTTGC+AGG | 0.290683 | 8.1:+72141045 | None:intergenic |
| AAATTAGAAACACCTTGTTT+TGG | 0.309986 | 8.1:+72143032 | None:intergenic |
| GGCAATGTTCTTTCCAGTTT+CGG | 0.314542 | 8.1:+72143337 | None:intergenic |
| CGCCACTTAGTAGTCCTAGA+AGG | 0.320688 | 8.1:-72142881 | MS.gene066429:CDS |
| CGCATCTCTTGAATGAGTTT+CGG | 0.339640 | 8.1:+72143754 | None:intergenic |
| GTTTGAGGCGTTGAGCGATA+TGG | 0.347792 | 8.1:-72144493 | MS.gene066429:CDS |
| ACATGCTTCTGTTTCTGGTT+TGG | 0.349180 | 8.1:+72143782 | None:intergenic |
| GGATCAGAAAATTCCGAAAC+TGG | 0.353658 | 8.1:-72143350 | MS.gene066429:CDS |
| GCCAAGTCCAGTGTCTGTTC+TGG | 0.356364 | 8.1:-72141980 | MS.gene066429:CDS |
| AGTGAGAGGGAGATGGTGAT+TGG | 0.357655 | 8.1:+72142058 | None:intergenic |
| TCTGGATGCACCATTCTTAG+AGG | 0.377217 | 8.1:-72141962 | MS.gene066429:CDS |
| TTTCTGAGATATCATGGCTT+TGG | 0.388608 | 8.1:+72142516 | None:intergenic |
| GACAATTCTATTTGAAATGT+TGG | 0.391719 | 8.1:+72143394 | None:intergenic |
| CTTCATTGATACATTCGTAT+AGG | 0.394602 | 8.1:+72140916 | None:intergenic |
| ACACGTTGGACAAAATTGTT+AGG | 0.397114 | 8.1:-72140743 | MS.gene066429:CDS |
| GACTGGTACTAATAACGATT+TGG | 0.397897 | 8.1:-72143087 | MS.gene066429:CDS |
| ATTCTAAAGCCGGGATCAAT+TGG | 0.398074 | 8.1:-72143371 | MS.gene066429:CDS |
| CAGGTGGTGTTGTACATTCT+AGG | 0.399639 | 8.1:-72144521 | MS.gene066429:CDS |
| TGATCATGGCATAGCCGGTT+TGG | 0.402002 | 8.1:+72140945 | None:intergenic |
| TTAGAGGATGATGCCTGCTC+TGG | 0.402006 | 8.1:-72141946 | MS.gene066429:CDS |
| AGACCCTTCCTTGTTTGATC+AGG | 0.402706 | 8.1:-72140979 | MS.gene066429:CDS |
| TTGTCCAACGTGTGCGGCGG+GGG | 0.402773 | 8.1:+72140753 | None:intergenic |
| GTAACTATCTCATCTCTAAC+AGG | 0.402980 | 8.1:+72142723 | None:intergenic |
| CGTATAGGAGTTTCTGATCA+TGG | 0.411399 | 8.1:+72140931 | None:intergenic |
| GAAACGATATTATTCTTCCT+AGG | 0.411591 | 8.1:+72142919 | None:intergenic |
| CCCTCTCACTCTTCAATCAC+TGG | 0.412260 | 8.1:-72142045 | MS.gene066429:CDS |
| TAGTTCAAAACCAACTGTTT+CGG | 0.423616 | 8.1:+72140674 | None:intergenic |
| CAGAACTTTCTGAGATATCA+TGG | 0.425054 | 8.1:+72142510 | None:intergenic |
| GATATTGAACGGAAAAGATC+TGG | 0.426905 | 8.1:-72143708 | MS.gene066429:CDS |
| AAGAAATTAAAGCATGCTAT+AGG | 0.437693 | 8.1:-72143230 | MS.gene066429:CDS |
| AAAGCAGTCCTGCAAGCCTC+TGG | 0.441992 | 8.1:-72141053 | MS.gene066429:CDS |
| TTCGCCATGGTCACTCTACT+AGG | 0.444965 | 8.1:-72144827 | MS.gene066429:CDS |
| CTTTCTGTACTGAGGCCAAC+TGG | 0.446074 | 8.1:+72142545 | None:intergenic |
| AGTGGCGAAAAGTTGTAATC+AGG | 0.448371 | 8.1:+72142897 | None:intergenic |
| TGTTTCTAATTTATATATTG+AGG | 0.454543 | 8.1:-72143021 | MS.gene066429:CDS |
| CGACCTAATTCACGTTGATA+AGG | 0.458641 | 8.1:-72142760 | MS.gene066429:CDS |
| TAGATTGCTTCCTTGAGTGC+TGG | 0.463832 | 8.1:+72143909 | None:intergenic |
| ATGCTTACCAGGTTGACATC+TGG | 0.465472 | 8.1:+72141918 | None:intergenic |
| GGACTTACAAATGATACAAA+AGG | 0.467486 | 8.1:+72140855 | None:intergenic |
| AGACAACGATTCCAACTTCT+CGG | 0.467949 | 8.1:-72143534 | MS.gene066429:CDS |
| ATGATCTTGCTCCGAGAAGT+TGG | 0.468663 | 8.1:+72143523 | None:intergenic |
| TTTGGAGTTGGCTTTATGCT+AGG | 0.471170 | 8.1:+72140834 | None:intergenic |
| AGCGATTGTGGAGCGTGAAA+AGG | 0.472851 | 8.1:-72143063 | MS.gene066429:CDS |
| TCAGCTTATAAGTTCAGATA+AGG | 0.476083 | 8.1:-72143639 | MS.gene066429:CDS |
| GAGAGTACCACAGATGCATC+CGG | 0.478405 | 8.1:-72142006 | MS.gene066429:CDS |
| AGAGTTTGAGAATTCTCATC+GGG | 0.480241 | 8.1:-72143561 | MS.gene066429:CDS |
| TCCATGATGCATGGCGATGA+TGG | 0.480318 | 8.1:-72143827 | MS.gene066429:CDS |
| TAGAATTGTCATTCTAAAGC+CGG | 0.480624 | 8.1:-72143381 | MS.gene066429:CDS |
| TAGTAGTCCTAGAAGGGATT+GGG | 0.483202 | 8.1:-72142874 | MS.gene066429:CDS |
| CTTTGCATCGCCAGCACTCA+AGG | 0.484839 | 8.1:-72143919 | MS.gene066429:CDS |
| AAACGATATTATTCTTCCTA+GGG | 0.484932 | 8.1:+72142920 | None:intergenic |
| CCTTTAGTAACACCGGTTGA+AGG | 0.488714 | 8.1:+72143116 | None:intergenic |
| TAACGATTTGGAAGCGATTG+TGG | 0.492510 | 8.1:-72143075 | MS.gene066429:CDS |
| TTAGTAGTCCTAGAAGGGAT+TGG | 0.503009 | 8.1:-72142875 | MS.gene066429:CDS |
| AAAATTGCAAGGCCTTCAAC+CGG | 0.505000 | 8.1:-72143128 | MS.gene066429:CDS |
| TCCGACATTGTCTTTACCAA+TGG | 0.505437 | 8.1:+72143187 | None:intergenic |
| AAGATAAGGCGGGCTGTATG+TGG | 0.508435 | 8.1:-72144872 | MS.gene066429:CDS |
| TTCCATCAGATCTGATAGAA+TGG | 0.509034 | 8.1:+72140644 | None:intergenic |
| TCCAGAACAGACACTGGACT+TGG | 0.512169 | 8.1:+72141979 | None:intergenic |
| TTAGCAATAGTTCTCACTGT+TGG | 0.512383 | 8.1:+72144130 | None:intergenic |
| CTGATGGAAGATACAATACT+TGG | 0.516952 | 8.1:-72140630 | MS.gene066429:CDS |
| GCCAACTCCAAATATGAAAA+CGG | 0.518097 | 8.1:-72140823 | MS.gene066429:CDS |
| TGCCATTCTATCAGATCTGA+TGG | 0.518249 | 8.1:-72140646 | MS.gene066429:CDS |
| AACTTCTCGGAGCAAGATCA+TGG | 0.518672 | 8.1:-72143521 | MS.gene066429:CDS |
| TCCATCATCGCCATGCATCA+TGG | 0.518875 | 8.1:+72143826 | None:intergenic |
| ACATTCTAGGAATAAGTTTG+AGG | 0.519343 | 8.1:-72144508 | MS.gene066429:CDS |
| TGAACGCATTTCAATACAAG+TGG | 0.519588 | 8.1:+72143584 | None:intergenic |
| TATGAAAACGGTTATTCTCA+TGG | 0.520104 | 8.1:-72140811 | MS.gene066429:CDS |
| CCTTCAACCGGTGTTACTAA+AGG | 0.520420 | 8.1:-72143116 | MS.gene066429:CDS |
| GCGATTGTGGAGCGTGAAAA+GGG | 0.522062 | 8.1:-72143062 | MS.gene066429:CDS |
| CGATTTGAAGCCGAAACAGT+TGG | 0.522143 | 8.1:-72140684 | MS.gene066429:CDS |
| CCCAGTGATTGAAGAGTGAG+AGG | 0.528214 | 8.1:+72142044 | None:intergenic |
| AGATAAGGCGGGCTGTATGT+GGG | 0.530031 | 8.1:-72144871 | MS.gene066429:CDS |
| ACATCTGGAGTTCCCAGAGC+AGG | 0.533362 | 8.1:+72141933 | None:intergenic |
| AGAATTGTCATTCTAAAGCC+GGG | 0.534862 | 8.1:-72143380 | MS.gene066429:CDS |
| TGAACATGTAGTGGTTGTAC+AGG | 0.536167 | 8.1:+72141164 | None:intergenic |
| AAATATTGTATCGAAGAAAA+CGG | 0.537831 | 8.1:-72141095 | MS.gene066429:CDS |
| AGGTAGAGTTATCACCAAAC+CGG | 0.541663 | 8.1:-72140959 | MS.gene066429:CDS |
| GCCACTTAGTAGTCCTAGAA+GGG | 0.541873 | 8.1:-72142880 | MS.gene066429:CDS |
| AGACACTGGACTTGGCCGCC+CGG | 0.543018 | 8.1:+72141987 | None:intergenic |
| TGGCCGCCCGGATGCATCTG+TGG | 0.544118 | 8.1:+72141999 | None:intergenic |
| AATTAAAGCATGCTATAGGA+AGG | 0.545234 | 8.1:-72143226 | MS.gene066429:CDS |
| TTTGTCCAACGTGTGCGGCG+GGG | 0.547696 | 8.1:+72140752 | None:intergenic |
| TCTATGAGTTTCTTCACACT+AGG | 0.549187 | 8.1:+72144103 | None:intergenic |
| CAGGCATCATCCTCTAAGAA+TGG | 0.549437 | 8.1:+72141952 | None:intergenic |
| GTTTCTGATCATGGCATAGC+CGG | 0.551909 | 8.1:+72140940 | None:intergenic |
| ATTGAAGAGTGAGAGGGAGA+TGG | 0.558545 | 8.1:+72142051 | None:intergenic |
| CCTCTCACTCTTCAATCACT+GGG | 0.558663 | 8.1:-72142044 | MS.gene066429:CDS |
| TAGAGGATGATGCCTGCTCT+GGG | 0.559247 | 8.1:-72141945 | MS.gene066429:CDS |
| TGTGTAAGTAAGAGTTCAGA+AGG | 0.559506 | 8.1:-72140606 | MS.gene066429:CDS |
| TCTACCTGATCAAACAAGGA+AGG | 0.560059 | 8.1:+72140975 | None:intergenic |
| CGAAGCAGCAAGCACTCTGA+TGG | 0.563703 | 8.1:-72144783 | MS.gene066429:intron |
| CTTGTCTCCTTTAGTAACAC+CGG | 0.564916 | 8.1:+72143109 | None:intergenic |
| AGGCAAAATTCCAAAACCCT+AGG | 0.565164 | 8.1:-72142936 | MS.gene066429:CDS |
| GAGAGACATGGAAAAGCCAT+TGG | 0.566102 | 8.1:-72143203 | MS.gene066429:CDS |
| TTCAATCACTGGGAACACTA+AGG | 0.568181 | 8.1:-72142034 | MS.gene066429:CDS |
| GAATCTTCCTCAGAACCAGT+TGG | 0.571753 | 8.1:-72142560 | MS.gene066429:CDS |
| TGTATCAATGAAGTTCTCAC+AGG | 0.572062 | 8.1:-72140906 | MS.gene066429:CDS |
| TGTAAGTAAGAGTTCAGAAG+GGG | 0.576639 | 8.1:-72140604 | MS.gene066429:CDS |
| CTGTTTCGGCTTCAAATCGA+AGG | 0.580721 | 8.1:+72140688 | None:intergenic |
| GTCGTCTGAGAGATTTGAGT+CGG | 0.581267 | 8.1:+72142779 | None:intergenic |
| GGTCAGCACTTTCTGTACTG+AGG | 0.584272 | 8.1:+72142537 | None:intergenic |
| TACAATTCTCCTTCTGTGAG+AGG | 0.584351 | 8.1:-72143284 | MS.gene066429:CDS |
| AGAGTACCACAGATGCATCC+GGG | 0.586925 | 8.1:-72142005 | MS.gene066429:CDS |
| GGGAACTCCAGATGTCAACC+TGG | 0.590832 | 8.1:-72141925 | MS.gene066429:intron |
| ACATGATGGACTTGTCAAGT+AGG | 0.591799 | 8.1:-72142956 | MS.gene066429:CDS |
| GTTATTCTCATGGTATCAGA+AGG | 0.592327 | 8.1:-72140801 | MS.gene066429:CDS |
| GGGGTTTGTTGCGATTACTT+CGG | 0.592471 | 8.1:-72140885 | MS.gene066429:CDS |
| GTGAATCAGATGATATTGAA+CGG | 0.595207 | 8.1:-72143719 | MS.gene066429:CDS |
| CTCTACTAGGAAGTTGATTG+CGG | 0.598163 | 8.1:-72144814 | MS.gene066429:CDS |
| ACTGAGGCCAACTGGTTCTG+AGG | 0.602898 | 8.1:+72142553 | None:intergenic |
| TCTTCGAATTGAACATGTAG+TGG | 0.604676 | 8.1:+72141155 | None:intergenic |
| CAAAATTGTTAGGAAAGACA+TGG | 0.608101 | 8.1:-72140733 | MS.gene066429:CDS |
| TTGATCTCTTGTCAATCCAG+AGG | 0.608442 | 8.1:+72141037 | None:intergenic |
| ATTAAAGCATGCTATAGGAA+GGG | 0.608555 | 8.1:-72143225 | MS.gene066429:CDS |
| CGGTATGAGAAAGATAAGGC+GGG | 0.609169 | 8.1:-72144882 | MS.gene066429:CDS |
| CTACCTGATCAAACAAGGAA+GGG | 0.610574 | 8.1:+72140976 | None:intergenic |
| CTAGCATCTTGTCTGAGGAA+AGG | 0.610891 | 8.1:+72141000 | None:intergenic |
| AAGAGTTTGAGAATTCTCAT+CGG | 0.611148 | 8.1:-72143562 | MS.gene066429:CDS |
| TAATGAAGATGAGAACATGA+TGG | 0.611149 | 8.1:-72142970 | MS.gene066429:CDS |
| GATAAGGCGGGCTGTATGTG+GGG | 0.612261 | 8.1:-72144870 | MS.gene066429:CDS |
| GTTACTAAAGGAGACAAGAC+TGG | 0.612940 | 8.1:-72143104 | MS.gene066429:CDS |
| AGAGATGAGATAGTTACTGA+AGG | 0.615501 | 8.1:-72142717 | MS.gene066429:intron |
| GGTGCATCCAGAACAGACAC+TGG | 0.617788 | 8.1:+72141973 | None:intergenic |
| AGGGTCTAGCATCTTGTCTG+AGG | 0.622611 | 8.1:+72140995 | None:intergenic |
| TAAGAAACATCTGAGCGAGA+TGG | 0.624718 | 8.1:-72142997 | MS.gene066429:CDS |
| TGGTATCAGAAGGAGTCTGT+TGG | 0.627595 | 8.1:-72140791 | MS.gene066429:CDS |
| TGTGAACTACCTCTCACAGA+AGG | 0.628814 | 8.1:+72143275 | None:intergenic |
| AGAATATAGATAATTCTGAA+AGG | 0.628958 | 8.1:-72144048 | MS.gene066429:CDS |
| GCCATTGGTAAAGACAATGT+CGG | 0.629733 | 8.1:-72143188 | MS.gene066429:CDS |
| ATCATGAGAATCTAGAGATG+AGG | 0.631616 | 8.1:+72143316 | None:intergenic |
| TAACTCTACCTGATCAAACA+AGG | 0.632508 | 8.1:+72140971 | None:intergenic |
| GATATGGATGAAGTTTGTCA+TGG | 0.633859 | 8.1:-72144477 | MS.gene066429:CDS |
| TCATGAATGTTTCAGGACGG+TGG | 0.638035 | 8.1:-72144166 | MS.gene066429:intron |
| GTGTAAGTAAGAGTTCAGAA+GGG | 0.639920 | 8.1:-72140605 | MS.gene066429:CDS |
| TGTGCGGTATGAGAAAGATA+AGG | 0.641875 | 8.1:-72144886 | MS.gene066429:CDS |
| ATTGAACGGAAAAGATCTGG+AGG | 0.643692 | 8.1:-72143705 | MS.gene066429:CDS |
| TAGTCCTAGAAGGGATTGGG+AGG | 0.646359 | 8.1:-72142871 | MS.gene066429:CDS |
| TACAAATGATACAAAAGGCG+AGG | 0.652576 | 8.1:+72140860 | None:intergenic |
| GTATCAATGAAGTTCTCACA+GGG | 0.652871 | 8.1:-72140905 | MS.gene066429:CDS |
| GGTGTTTGTTCCATGATGCA+TGG | 0.653372 | 8.1:-72143836 | MS.gene066429:CDS |
| GCTATAGGAAGGGAGAGACA+TGG | 0.657555 | 8.1:-72143215 | MS.gene066429:CDS |
| CCAGTGATTGAAGAGTGAGA+GGG | 0.659479 | 8.1:+72142045 | None:intergenic |
| TCCCTTCTAGGACTACTAAG+TGG | 0.662099 | 8.1:+72142879 | None:intergenic |
| AAACATCTGAGCGAGATGGT+AGG | 0.662371 | 8.1:-72142993 | MS.gene066429:CDS |
| ACTTCCTAGTAGAGTGACCA+TGG | 0.666781 | 8.1:+72144823 | None:intergenic |
| GCGGTATGAGAAAGATAAGG+CGG | 0.669758 | 8.1:-72144883 | MS.gene066429:CDS |
| GATGGAGAAGTAGAAAAGCA+TGG | 0.671133 | 8.1:-72143809 | MS.gene066429:CDS |
| ATCTAAAGATAATCTTGACG+TGG | 0.673939 | 8.1:-72143891 | MS.gene066429:CDS |
| GTAAGTAAGAGTTCAGAAGG+GGG | 0.702089 | 8.1:-72140603 | MS.gene066429:CDS |
| AGTCTCAAAGACGTGCTGTG+CGG | 0.729253 | 8.1:-72144902 | MS.gene066429:CDS |
| TATCAATGAAGTTCTCACAG+GGG | 0.744165 | 8.1:-72140904 | MS.gene066429:CDS |
| GTACCACAGATGCATCCGGG+CGG | 0.747479 | 8.1:-72142002 | MS.gene066429:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATATAACATTCAATAA+AGG | + | chr8.1:72143302-72143321 | None:intergenic | 10.0% |
| !!! | AAATTGAATAAATTTTTTGT+AGG | - | chr8.1:72143226-72143245 | MS.gene066429:CDS | 10.0% |
| !!! | AATTGAATAAATTTTTTGTA+GGG | - | chr8.1:72143227-72143246 | MS.gene066429:CDS | 10.0% |
| !!! | TATTGAATGTTATATTTTTA+TGG | - | chr8.1:72143303-72143322 | MS.gene066429:CDS | 10.0% |
| !! | AATAATAATACTTACTAGTA+TGG | - | chr8.1:72143790-72143809 | MS.gene066429:CDS | 15.0% |
| !! | AATATTTAGTGTGTATATAT+TGG | - | chr8.1:72143881-72143900 | MS.gene066429:CDS | 15.0% |
| !!! | ATAAATTGATGATTTATGTA+AGG | - | chr8.1:72143047-72143066 | MS.gene066429:CDS | 15.0% |
| !!! | ATTGAATAAATTTTTTGTAG+GGG | - | chr8.1:72143228-72143247 | MS.gene066429:CDS | 15.0% |
| !!! | TAAATTGATGATTTATGTAA+GGG | - | chr8.1:72143048-72143067 | MS.gene066429:CDS | 15.0% |
| !!! | TGTTTCTAATTTATATATTG+AGG | - | chr8.1:72142451-72142470 | MS.gene066429:intron | 15.0% |
| !!! | TTTTTACTTAATTCTTATAG+TGG | - | chr8.1:72144120-72144139 | MS.gene066429:CDS | 15.0% |
| !! | AAAGTAATATGGAATACATA+TGG | + | chr8.1:72144247-72144266 | None:intergenic | 20.0% |
| !! | AAATATTGTATCGAAGAAAA+CGG | - | chr8.1:72144377-72144396 | MS.gene066429:intron | 20.0% |
| !! | AGAATATAGATAATTCTGAA+AGG | - | chr8.1:72141424-72141443 | MS.gene066429:intron | 20.0% |
| !! | ATGAAGAAATGATCTTTATT+AGG | + | chr8.1:72142320-72142339 | None:intergenic | 20.0% |
| !!! | ATTCCATATTACTTTTAATC+TGG | - | chr8.1:72144252-72144271 | MS.gene066429:intron | 20.0% |
| !!! | TATTTTTATGGTCTTTTCTT+TGG | - | chr8.1:72143315-72143334 | MS.gene066429:CDS | 20.0% |
| ! | AAAATGGTCAAAGTTAATGT+AGG | + | chr8.1:72143123-72143142 | None:intergenic | 25.0% |
| ! | AAACGATATTATTCTTCCTA+GGG | + | chr8.1:72142555-72142574 | None:intergenic | 25.0% |
| ! | AAATGGTCAAAGTTAATGTA+GGG | + | chr8.1:72143122-72143141 | None:intergenic | 25.0% |
| ! | AAGAAATTAAAGCATGCTAT+AGG | - | chr8.1:72142242-72142261 | MS.gene066429:intron | 25.0% |
| ! | ATACTTACTAGTATGGTTAT+TGG | - | chr8.1:72143797-72143816 | MS.gene066429:CDS | 25.0% |
| ! | ATCGCTGATGATTTAAATTT+GGG | - | chr8.1:72141510-72141529 | MS.gene066429:intron | 25.0% |
| ! | ATGCCAGATTAAAAGTAATA+TGG | + | chr8.1:72144258-72144277 | None:intergenic | 25.0% |
| ! | ATTAAACTGTTTATCCAAAC+AGG | + | chr8.1:72143594-72143613 | None:intergenic | 25.0% |
| ! | CAAACTAAAAAAATACTGAG+TGG | - | chr8.1:72141066-72141085 | MS.gene066429:CDS | 25.0% |
| ! | TACAAAATGTTGTCATATAG+AGG | + | chr8.1:72141160-72141179 | None:intergenic | 25.0% |
| ! | TATCGCTGATGATTTAAATT+TGG | - | chr8.1:72141509-72141528 | MS.gene066429:intron | 25.0% |
| ! | TCTTCATTGAAAAAATTGCA+AGG | - | chr8.1:72142333-72142352 | MS.gene066429:intron | 25.0% |
| ! | TGAAAAAGTTATGCTTCTTA+TGG | + | chr8.1:72142007-72142026 | None:intergenic | 25.0% |
| ! | TGATGAGTTGCATTAAAATA+TGG | + | chr8.1:72141042-72141061 | None:intergenic | 25.0% |
| ! | TGGGAAATCATAATATTGTA+GGG | + | chr8.1:72143091-72143110 | None:intergenic | 25.0% |
| ! | TTAAACTGTTTATCCAAACA+GGG | + | chr8.1:72143593-72143612 | None:intergenic | 25.0% |
| ! | TTGGGAAATCATAATATTGT+AGG | + | chr8.1:72143092-72143111 | None:intergenic | 25.0% |
| ! | TTGTACTAAATAGTGTATCA+TGG | - | chr8.1:72141175-72141194 | MS.gene066429:CDS | 25.0% |
| ! | TTTGAATTCTTTCTTCTTAC+AGG | - | chr8.1:72140932-72140951 | MS.gene066429:CDS | 25.0% |
| !! | AGAATAACCGTTTTCATATT+TGG | + | chr8.1:72144659-72144678 | None:intergenic | 25.0% |
| !! | GACAATTCTATTTGAAATGT+TGG | + | chr8.1:72142081-72142100 | None:intergenic | 25.0% |
| !! | TATTAGCTTACATGTTTGTT+AGG | - | chr8.1:72144089-72144108 | MS.gene066429:CDS | 25.0% |
| !! | TCTTTTCTCTGATGAAATAA+TGG | - | chr8.1:72141803-72141822 | MS.gene066429:intron | 25.0% |
| !!! | AAATTAGAAACACCTTGTTT+TGG | + | chr8.1:72142443-72142462 | None:intergenic | 25.0% |
| !!! | ATAAGAAGCATAACTTTTTC+AGG | - | chr8.1:72142006-72142025 | MS.gene066429:CDS | 25.0% |
| !!! | GGAAGATTTCTTTTTTCTTT+TGG | + | chr8.1:72141475-72141494 | None:intergenic | 25.0% |
| !!! | GTCTTTTAGCTTTTTTTCAT+TGG | - | chr8.1:72143720-72143739 | MS.gene066429:CDS | 25.0% |
| AAAAGTTGGAGTTGTTTACT+AGG | - | chr8.1:72143751-72143770 | MS.gene066429:CDS | 30.0% | |
| AAAGTTGGAGTTGTTTACTA+GGG | - | chr8.1:72143752-72143771 | MS.gene066429:CDS | 30.0% | |
| AAGAGTTTGAGAATTCTCAT+CGG | - | chr8.1:72141910-72141929 | MS.gene066429:intron | 30.0% | |
| AAGCAAAGCAAGGAATAAAA+TGG | + | chr8.1:72143139-72143158 | None:intergenic | 30.0% | |
| AATGAATCACTACCTAAACA+TGG | - | chr8.1:72143975-72143994 | MS.gene066429:CDS | 30.0% | |
| AATTAAAGCATGCTATAGGA+AGG | - | chr8.1:72142246-72142265 | MS.gene066429:intron | 30.0% | |
| ACTTGTCATATAAGTGCTAA+TGG | - | chr8.1:72143634-72143653 | MS.gene066429:CDS | 30.0% | |
| ATAAGATGCAATTTGCCATT+TGG | - | chr8.1:72144161-72144180 | MS.gene066429:intron | 30.0% | |
| ATATCATGAATGTTTCAGGA+CGG | - | chr8.1:72141303-72141322 | MS.gene066429:intron | 30.0% | |
| ATCTAAAGATAATCTTGACG+TGG | - | chr8.1:72141581-72141600 | MS.gene066429:intron | 30.0% | |
| ATGGATAGAAAGACTTACAA+AGG | + | chr8.1:72141023-72141042 | None:intergenic | 30.0% | |
| ATTAAAGCATGCTATAGGAA+GGG | - | chr8.1:72142247-72142266 | MS.gene066429:intron | 30.0% | |
| ATTCCTTGCTTTGCTTTAAT+AGG | - | chr8.1:72143143-72143162 | MS.gene066429:CDS | 30.0% | |
| CAAAACTGAACTCAATCTAT+AGG | - | chr8.1:72143858-72143877 | MS.gene066429:CDS | 30.0% | |
| CAAAATTGTTAGGAAAGACA+TGG | - | chr8.1:72144739-72144758 | MS.gene066429:intron | 30.0% | |
| CACTATATCATGAATGTTTC+AGG | - | chr8.1:72141299-72141318 | MS.gene066429:intron | 30.0% | |
| CATTGGAAATAAGCAAAAGT+TGG | - | chr8.1:72143737-72143756 | MS.gene066429:CDS | 30.0% | |
| CGAGATTCATTATAATGAGT+CGG | + | chr8.1:72143927-72143946 | None:intergenic | 30.0% | |
| CTCATAAAAATATGCTTTCC+CGG | - | chr8.1:72140884-72140903 | MS.gene066429:CDS | 30.0% | |
| GAAACGATATTATTCTTCCT+AGG | + | chr8.1:72142556-72142575 | None:intergenic | 30.0% | |
| GAATTGTGCTTAACTAACAT+TGG | - | chr8.1:72140715-72140734 | MS.gene066429:CDS | 30.0% | |
| GGACTTACAAATGATACAAA+AGG | + | chr8.1:72144620-72144639 | None:intergenic | 30.0% | |
| GTGAATCAGATGATATTGAA+CGG | - | chr8.1:72141753-72141772 | MS.gene066429:intron | 30.0% | |
| TAATGAAGATGAGAACATGA+TGG | - | chr8.1:72142502-72142521 | MS.gene066429:CDS | 30.0% | |
| TAGTTCAAAACCAACTGTTT+CGG | + | chr8.1:72144801-72144820 | None:intergenic | 30.0% | |
| TATGAAAACGGTTATTCTCA+TGG | - | chr8.1:72144661-72144680 | MS.gene066429:intron | 30.0% | |
| TATTTAACAGCACTAACACT+AGG | - | chr8.1:72141242-72141261 | MS.gene066429:intron | 30.0% | |
| TCAGCTTATAAGTTCAGATA+AGG | - | chr8.1:72141833-72141852 | MS.gene066429:intron | 30.0% | |
| TGATAAGTAGACACATAAAG+AGG | + | chr8.1:72144010-72144029 | None:intergenic | 30.0% | |
| TTAATGTAGGGACTAAACTT+GGG | + | chr8.1:72143110-72143129 | None:intergenic | 30.0% | |
| TTGTTTACTAGGGATTTATC+AGG | - | chr8.1:72143762-72143781 | MS.gene066429:CDS | 30.0% | |
| ! | ACATTCTAGGAATAAGTTTG+AGG | - | chr8.1:72140964-72140983 | MS.gene066429:CDS | 30.0% |
| ! | CAATTTGCCATTTGGAAAAT+AGG | - | chr8.1:72144169-72144188 | MS.gene066429:intron | 30.0% |
| ! | CATTTCAATACAAGTGGATT+TGG | + | chr8.1:72141885-72141904 | None:intergenic | 30.0% |
| ! | TATTATTCTTCCTAGGGTTT+TGG | + | chr8.1:72142549-72142568 | None:intergenic | 30.0% |
| ! | TGCAGAATTTTCTCAATGTT+TGG | - | chr8.1:72142989-72143008 | MS.gene066429:CDS | 30.0% |
| ! | TTTACAACCTATGCTCATTT+TGG | - | chr8.1:72140753-72140772 | MS.gene066429:CDS | 30.0% |
| ! | TTTTATGGTCTTTTCTTTGG+TGG | - | chr8.1:72143318-72143337 | MS.gene066429:CDS | 30.0% |
| !! | GAAGAGTTTTGTAATCTAAG+AGG | - | chr8.1:72141615-72141634 | MS.gene066429:intron | 30.0% |
| !! | TAGAATTGTCATTCTAAAGC+CGG | - | chr8.1:72142091-72142110 | MS.gene066429:intron | 30.0% |
| !!! | AAGGGTATTTTTCCAAAACA+AGG | - | chr8.1:72142428-72142447 | MS.gene066429:intron | 30.0% |
| !!! | GCATAACTTTTTCAGGAAAA+AGG | - | chr8.1:72142013-72142032 | MS.gene066429:CDS | 30.0% |
| AAACAACATGCTTCTGTTTC+TGG | + | chr8.1:72141698-72141717 | None:intergenic | 35.0% | |
| ACACGTTGGACAAAATTGTT+AGG | - | chr8.1:72144729-72144748 | MS.gene066429:intron | 35.0% | |
| ACTACCTAAACATGGTATAG+TGG | - | chr8.1:72143983-72144002 | MS.gene066429:CDS | 35.0% | |
| AGAGATGAGATAGTTACTGA+AGG | - | chr8.1:72142755-72142774 | MS.gene066429:CDS | 35.0% | |
| AGAGTTTGAGAATTCTCATC+GGG | - | chr8.1:72141911-72141930 | MS.gene066429:intron | 35.0% | |
| AGGAAAGACATGGAAAAATG+TGG | - | chr8.1:72144749-72144768 | MS.gene066429:intron | 35.0% | |
| ATCATGAGAATCTAGAGATG+AGG | + | chr8.1:72142159-72142178 | None:intergenic | 35.0% | |
| CTGATGGAAGATACAATACT+TGG | - | chr8.1:72144842-72144861 | MS.gene066429:CDS | 35.0% | |
| CTTCCTTATCAACGTGAATT+AGG | + | chr8.1:72142718-72142737 | None:intergenic | 35.0% | |
| GAATTCTTTCTTCTTACAGG+TGG | - | chr8.1:72140935-72140954 | MS.gene066429:CDS | 35.0% | |
| GACTGGTACTAATAACGATT+TGG | - | chr8.1:72142385-72142404 | MS.gene066429:intron | 35.0% | |
| GATATGGATGAAGTTTGTCA+TGG | - | chr8.1:72140995-72141014 | MS.gene066429:CDS | 35.0% | |
| GATATTGAACGGAAAAGATC+TGG | - | chr8.1:72141764-72141783 | MS.gene066429:intron | 35.0% | |
| GCCAACTCCAAATATGAAAA+CGG | - | chr8.1:72144649-72144668 | MS.gene066429:intron | 35.0% | |
| GGAAAGACATGGAAAAATGT+GGG | - | chr8.1:72144750-72144769 | MS.gene066429:intron | 35.0% | |
| GTAACTATCTCATCTCTAAC+AGG | + | chr8.1:72142752-72142771 | None:intergenic | 35.0% | |
| GTATCAATGAAGTTCTCACA+GGG | - | chr8.1:72144567-72144586 | MS.gene066429:intron | 35.0% | |
| GTGTAAGTAAGAGTTCAGAA+GGG | - | chr8.1:72144867-72144886 | MS.gene066429:CDS | 35.0% | |
| GTTAATGTAGGGACTAAACT+TGG | + | chr8.1:72143111-72143130 | None:intergenic | 35.0% | |
| GTTATTCTCATGGTATCAGA+AGG | - | chr8.1:72144671-72144690 | MS.gene066429:intron | 35.0% | |
| GTTCCTATTAAAGCAAAGCA+AGG | + | chr8.1:72143149-72143168 | None:intergenic | 35.0% | |
| TAACTCTACCTGATCAAACA+AGG | + | chr8.1:72144504-72144523 | None:intergenic | 35.0% | |
| TACAAATGATACAAAAGGCG+AGG | + | chr8.1:72144615-72144634 | None:intergenic | 35.0% | |
| TATCAATGAAGTTCTCACAG+GGG | - | chr8.1:72144568-72144587 | MS.gene066429:intron | 35.0% | |
| TCAGCATAGTTATCAATTCG+AGG | + | chr8.1:72144216-72144235 | None:intergenic | 35.0% | |
| TCTATGAGTTTCTTCACACT+AGG | + | chr8.1:72141372-72141391 | None:intergenic | 35.0% | |
| TCTTCGAATTGAACATGTAG+TGG | + | chr8.1:72144320-72144339 | None:intergenic | 35.0% | |
| TGAACGCATTTCAATACAAG+TGG | + | chr8.1:72141891-72141910 | None:intergenic | 35.0% | |
| TGTAAGTAAGAGTTCAGAAG+GGG | - | chr8.1:72144868-72144887 | MS.gene066429:CDS | 35.0% | |
| TGTATCAATGAAGTTCTCAC+AGG | - | chr8.1:72144566-72144585 | MS.gene066429:intron | 35.0% | |
| TGTGTAAGTAAGAGTTCAGA+AGG | - | chr8.1:72144866-72144885 | MS.gene066429:CDS | 35.0% | |
| TTAGCAATAGTTCTCACTGT+TGG | + | chr8.1:72141345-72141364 | None:intergenic | 35.0% | |
| TTCCATCAGATCTGATAGAA+TGG | + | chr8.1:72144831-72144850 | None:intergenic | 35.0% | |
| ! | AGCGATATCATGTTTTCTCT+CGG | + | chr8.1:72141496-72141515 | None:intergenic | 35.0% |
| ! | CGGAAAACCTATTTTCCAAA+TGG | + | chr8.1:72144179-72144198 | None:intergenic | 35.0% |
| ! | CTTTTCTTAATTTCCGTGCA+GGG | - | chr8.1:72142856-72142875 | MS.gene066429:CDS | 35.0% |
| ! | TGTTAGTGCTGTTAAATAGC+AGG | + | chr8.1:72141240-72141259 | None:intergenic | 35.0% |
| ! | TTTTCTGATCCAATTGATCC+CGG | + | chr8.1:72142113-72142132 | None:intergenic | 35.0% |
| ! | TTTTCTTAATTTCCGTGCAG+GGG | - | chr8.1:72142857-72142876 | MS.gene066429:CDS | 35.0% |
| !! | ACCGTTTTCATATTTGGAGT+TGG | + | chr8.1:72144653-72144672 | None:intergenic | 35.0% |
| !! | AGAATTGTCATTCTAAAGCC+GGG | - | chr8.1:72142092-72142111 | MS.gene066429:intron | 35.0% |
| !! | ATTTTCTCAATGTTTGGAGC+AGG | - | chr8.1:72142995-72143014 | MS.gene066429:CDS | 35.0% |
| !! | CAGAACTTTCTGAGATATCA+TGG | + | chr8.1:72142965-72142984 | None:intergenic | 35.0% |
| !! | TTTCTGAGATATCATGGCTT+TGG | + | chr8.1:72142959-72142978 | None:intergenic | 35.0% |
| !!! | ATCACGAAGTCTTGTTTTTG+CGG | + | chr8.1:72142639-72142658 | None:intergenic | 35.0% |
| !!! | GAAACAGTTGGTTTTGAACT+AGG | - | chr8.1:72144800-72144819 | MS.gene066429:CDS | 35.0% |
| AAAATTGCAAGGCCTTCAAC+CGG | - | chr8.1:72142344-72142363 | MS.gene066429:intron | 40.0% | |
| ACATGGAAAAATGTGGGTCA+TGG | - | chr8.1:72144756-72144775 | MS.gene066429:intron | 40.0% | |
| AGACAACGATTCCAACTTCT+CGG | - | chr8.1:72141938-72141957 | MS.gene066429:CDS | 40.0% | |
| AGAGAGACCAAAATGAGCAT+AGG | + | chr8.1:72140763-72140782 | None:intergenic | 40.0% | |
| AGGCAAAATTCCAAAACCCT+AGG | - | chr8.1:72142536-72142555 | MS.gene066429:CDS | 40.0% | |
| AGGTAGAGTTATCACCAAAC+CGG | - | chr8.1:72144513-72144532 | MS.gene066429:CDS | 40.0% | |
| AGGTCCACTATACCATGTTT+AGG | + | chr8.1:72143990-72144009 | None:intergenic | 40.0% | |
| AGTGGCGAAAAGTTGTAATC+AGG | + | chr8.1:72142578-72142597 | None:intergenic | 40.0% | |
| ATTGAACGGAAAAGATCTGG+AGG | - | chr8.1:72141767-72141786 | MS.gene066429:intron | 40.0% | |
| CCTGCACGGAAATTAAGAAA+AGG | + | chr8.1:72142858-72142877 | None:intergenic | 40.0% | |
| CGACCTAATTCACGTTGATA+AGG | - | chr8.1:72142712-72142731 | MS.gene066429:intron | 40.0% | |
| CGCATCTCTTGAATGAGTTT+CGG | + | chr8.1:72141721-72141740 | None:intergenic | 40.0% | |
| CTACCTGATCAAACAAGGAA+GGG | + | chr8.1:72144499-72144518 | None:intergenic | 40.0% | |
| CTTGTCTCCTTTAGTAACAC+CGG | + | chr8.1:72142366-72142385 | None:intergenic | 40.0% | |
| GATGGAGAAGTAGAAAAGCA+TGG | - | chr8.1:72141663-72141682 | MS.gene066429:intron | 40.0% | |
| GCCATTGGTAAAGACAATGT+CGG | - | chr8.1:72142284-72142303 | MS.gene066429:intron | 40.0% | |
| GGATCAGAAAATTCCGAAAC+TGG | - | chr8.1:72142122-72142141 | MS.gene066429:intron | 40.0% | |
| GGCAATGTTCTTTCCAGTTT+CGG | + | chr8.1:72142138-72142157 | None:intergenic | 40.0% | |
| GTAAGTAAGAGTTCAGAAGG+GGG | - | chr8.1:72144869-72144888 | MS.gene066429:CDS | 40.0% | |
| GTTACTAAAGGAGACAAGAC+TGG | - | chr8.1:72142368-72142387 | MS.gene066429:intron | 40.0% | |
| TAAGAAACATCTGAGCGAGA+TGG | - | chr8.1:72142475-72142494 | MS.gene066429:intron | 40.0% | |
| TACAATTCTCCTTCTGTGAG+AGG | - | chr8.1:72142188-72142207 | MS.gene066429:intron | 40.0% | |
| TAGCAGGCTAAAGCATATAG+CGG | + | chr8.1:72141224-72141243 | None:intergenic | 40.0% | |
| TAGTAGTCCTAGAAGGGATT+GGG | - | chr8.1:72142598-72142617 | MS.gene066429:CDS | 40.0% | |
| TATCTTGCAATACATGCGAG+TGG | - | chr8.1:72143820-72143839 | MS.gene066429:CDS | 40.0% | |
| TCCGACATTGTCTTTACCAA+TGG | + | chr8.1:72142288-72142307 | None:intergenic | 40.0% | |
| TCGAGGTTCAAATTGTGAGT+CGG | + | chr8.1:72144199-72144218 | None:intergenic | 40.0% | |
| TCTACCTGATCAAACAAGGA+AGG | + | chr8.1:72144500-72144519 | None:intergenic | 40.0% | |
| TGAACATGTAGTGGTTGTAC+AGG | + | chr8.1:72144311-72144330 | None:intergenic | 40.0% | |
| TGCCATTCTATCAGATCTGA+TGG | - | chr8.1:72144826-72144845 | MS.gene066429:CDS | 40.0% | |
| TGTGCGGTATGAGAAAGATA+AGG | - | chr8.1:72140586-72140605 | MS.gene066429:CDS | 40.0% | |
| TTAGTAGTCCTAGAAGGGAT+TGG | - | chr8.1:72142597-72142616 | MS.gene066429:CDS | 40.0% | |
| TTCAATCACTGGGAACACTA+AGG | - | chr8.1:72143438-72143457 | MS.gene066429:CDS | 40.0% | |
| TTGATCTCTTGTCAATCCAG+AGG | + | chr8.1:72144438-72144457 | None:intergenic | 40.0% | |
| TTGTCATATAGAGGCTACAG+TGG | + | chr8.1:72141151-72141170 | None:intergenic | 40.0% | |
| ! | ACAATTTTGTCCAACGTGTG+CGG | + | chr8.1:72144728-72144747 | None:intergenic | 40.0% |
| ! | CCTTTTCTTAATTTCCGTGC+AGG | - | chr8.1:72142855-72142874 | MS.gene066429:CDS | 40.0% |
| ! | CTCTACTAGGAAGTTGATTG+CGG | - | chr8.1:72140658-72140677 | MS.gene066429:CDS | 40.0% |
| ! | CTGTCATTTGTTCTTTCTGC+AGG | - | chr8.1:72143375-72143394 | MS.gene066429:CDS | 40.0% |
| ! | TAACGATTTGGAAGCGATTG+TGG | - | chr8.1:72142397-72142416 | MS.gene066429:intron | 40.0% |
| !! | ACATGATGGACTTGTCAAGT+AGG | - | chr8.1:72142516-72142535 | MS.gene066429:CDS | 40.0% |
| !! | ACATGCTTCTGTTTCTGGTT+TGG | + | chr8.1:72141693-72141712 | None:intergenic | 40.0% |
| !! | ATTCTAAAGCCGGGATCAAT+TGG | - | chr8.1:72142101-72142120 | MS.gene066429:intron | 40.0% |
| !! | TTTGGAGTTGGCTTTATGCT+AGG | + | chr8.1:72144641-72144660 | None:intergenic | 40.0% |
| AAACATCTGAGCGAGATGGT+AGG | - | chr8.1:72142479-72142498 | MS.gene066429:CDS | 45.0% | |
| AACTTCTCGGAGCAAGATCA+TGG | - | chr8.1:72141951-72141970 | MS.gene066429:CDS | 45.0% | |
| ACTTCCTAGTAGAGTGACCA+TGG | + | chr8.1:72140652-72140671 | None:intergenic | 45.0% | |
| AGACACAACCATTAGAGACC+GGG | + | chr8.1:72140905-72140924 | None:intergenic | 45.0% | |
| ATGATCTTGCTCCGAGAAGT+TGG | + | chr8.1:72141952-72141971 | None:intergenic | 45.0% | |
| ATTGAAGAGTGAGAGGGAGA+TGG | + | chr8.1:72143424-72143443 | None:intergenic | 45.0% | |
| CAGACACAACCATTAGAGAC+CGG | + | chr8.1:72140906-72140925 | None:intergenic | 45.0% | |
| CCAGTGATTGAAGAGTGAGA+GGG | + | chr8.1:72143430-72143449 | None:intergenic | 45.0% | |
| CCTCTCACTCTTCAATCACT+GGG | - | chr8.1:72143428-72143447 | MS.gene066429:CDS | 45.0% | |
| CGGTATGAGAAAGATAAGGC+GGG | - | chr8.1:72140590-72140609 | MS.gene066429:CDS | 45.0% | |
| CTAGCATCTTGTCTGAGGAA+AGG | + | chr8.1:72144475-72144494 | None:intergenic | 45.0% | |
| CTGTTTCGGCTTCAAATCGA+AGG | + | chr8.1:72144787-72144806 | None:intergenic | 45.0% | |
| GAATCTTCCTCAGAACCAGT+TGG | - | chr8.1:72142912-72142931 | MS.gene066429:CDS | 45.0% | |
| GAGAGACATGGAAAAGCCAT+TGG | - | chr8.1:72142269-72142288 | MS.gene066429:intron | 45.0% | |
| GCCACTTAGTAGTCCTAGAA+GGG | - | chr8.1:72142592-72142611 | MS.gene066429:CDS | 45.0% | |
| GCGGTATGAGAAAGATAAGG+CGG | - | chr8.1:72140589-72140608 | MS.gene066429:CDS | 45.0% | |
| GGAAAAATGTGGGTCATGGA+TGG | - | chr8.1:72144760-72144779 | MS.gene066429:intron | 45.0% | |
| GGTGTTTGTTCCATGATGCA+TGG | - | chr8.1:72141636-72141655 | MS.gene066429:intron | 45.0% | |
| GTCGTCTGAGAGATTTGAGT+CGG | + | chr8.1:72142696-72142715 | None:intergenic | 45.0% | |
| GTTTCTGATCATGGCATAGC+CGG | + | chr8.1:72144535-72144554 | None:intergenic | 45.0% | |
| TAGATTGCTTCCTTGAGTGC+TGG | + | chr8.1:72141566-72141585 | None:intergenic | 45.0% | |
| TATGCTTTCCCGGTCTCTAA+TGG | - | chr8.1:72140894-72140913 | MS.gene066429:CDS | 45.0% | |
| TCATGAATGTTTCAGGACGG+TGG | - | chr8.1:72141306-72141325 | MS.gene066429:intron | 45.0% | |
| TCTGGATGCACCATTCTTAG+AGG | - | chr8.1:72143510-72143529 | MS.gene066429:CDS | 45.0% | |
| TGAGTGCATGAATGCTTACC+AGG | + | chr8.1:72143568-72143587 | None:intergenic | 45.0% | |
| TGGTAAGCATTCATGCACTC+AGG | - | chr8.1:72143567-72143586 | MS.gene066429:CDS | 45.0% | |
| TGGTATCAGAAGGAGTCTGT+TGG | - | chr8.1:72144681-72144700 | MS.gene066429:intron | 45.0% | |
| TGTGAACTACCTCTCACAGA+AGG | + | chr8.1:72142200-72142219 | None:intergenic | 45.0% | |
| ! | AGACCCTTCCTTGTTTGATC+AGG | - | chr8.1:72144493-72144512 | MS.gene066429:CDS | 45.0% |
| ! | AGCATGCTTGATTTTCGCCA+TGG | - | chr8.1:72140632-72140651 | MS.gene066429:CDS | 45.0% |
| ! | ATGCTTACCAGGTTGACATC+TGG | + | chr8.1:72143557-72143576 | None:intergenic | 45.0% |
| ! | CAGGCATCATCCTCTAAGAA+TGG | + | chr8.1:72143523-72143542 | None:intergenic | 45.0% |
| ! | CCTTTAGTAACACCGGTTGA+AGG | + | chr8.1:72142359-72142378 | None:intergenic | 45.0% |
| ! | CGATTTGAAGCCGAAACAGT+TGG | - | chr8.1:72144788-72144807 | MS.gene066429:CDS | 45.0% |
| ! | TTCTCAATGTTTGGAGCAGG+TGG | - | chr8.1:72142998-72143017 | MS.gene066429:CDS | 45.0% |
| !! | AGTGGTGCTATATCACGTAG+CGG | + | chr8.1:72141133-72141152 | None:intergenic | 45.0% |
| !! | ATACTGAGTGGTGTCATTCG+CGG | - | chr8.1:72141078-72141097 | MS.gene066429:CDS | 45.0% |
| !! | CAGGTGGTGTTGTACATTCT+AGG | - | chr8.1:72140951-72140970 | MS.gene066429:CDS | 45.0% |
| !! | CCTTCAACCGGTGTTACTAA+AGG | - | chr8.1:72142356-72142375 | MS.gene066429:intron | 45.0% |
| !! | GGGGTTTGTTGCGATTACTT+CGG | - | chr8.1:72144587-72144606 | MS.gene066429:intron | 45.0% |
| !! | TCCCTTCTAGGACTACTAAG+TGG | + | chr8.1:72142596-72142615 | None:intergenic | 45.0% |
| !!! | TAAAAATTCATAATTTTATA+GGG | - | chr8.1:72143258-72143277 | MS.gene066429:CDS | 5.0% |
| !!! | TTAAAAATTCATAATTTTAT+AGG | - | chr8.1:72143257-72143276 | MS.gene066429:CDS | 5.0% |
| AGCGATTGTGGAGCGTGAAA+AGG | - | chr8.1:72142409-72142428 | MS.gene066429:intron | 50.0% | |
| AGGGTCTAGCATCTTGTCTG+AGG | + | chr8.1:72144480-72144499 | None:intergenic | 50.0% | |
| AGTCTCAAAGACGTGCTGTG+CGG | - | chr8.1:72140570-72140589 | MS.gene066429:CDS | 50.0% | |
| AGTGAGAGGGAGATGGTGAT+TGG | + | chr8.1:72143417-72143436 | None:intergenic | 50.0% | |
| CAGATTCTACATCCCCTGCA+CGG | + | chr8.1:72142872-72142891 | None:intergenic | 50.0% | |
| CCCAGTGATTGAAGAGTGAG+AGG | + | chr8.1:72143431-72143450 | None:intergenic | 50.0% | |
| CCCTCTCACTCTTCAATCAC+TGG | - | chr8.1:72143427-72143446 | MS.gene066429:CDS | 50.0% | |
| CGCCACTTAGTAGTCCTAGA+AGG | - | chr8.1:72142591-72142610 | MS.gene066429:CDS | 50.0% | |
| CTTTCTGTACTGAGGCCAAC+TGG | + | chr8.1:72142930-72142949 | None:intergenic | 50.0% | |
| GCGATTGTGGAGCGTGAAAA+GGG | - | chr8.1:72142410-72142429 | MS.gene066429:intron | 50.0% | |
| GCTATAGGAAGGGAGAGACA+TGG | - | chr8.1:72142257-72142276 | MS.gene066429:intron | 50.0% | |
| GGTCAGCACTTTCTGTACTG+AGG | + | chr8.1:72142938-72142957 | None:intergenic | 50.0% | |
| TAGAGGATGATGCCTGCTCT+GGG | - | chr8.1:72143527-72143546 | MS.gene066429:CDS | 50.0% | |
| TAGTCCTAGAAGGGATTGGG+AGG | - | chr8.1:72142601-72142620 | MS.gene066429:intron | 50.0% | |
| TCCAGAACAGACACTGGACT+TGG | + | chr8.1:72143496-72143515 | None:intergenic | 50.0% | |
| TCCATCATCGCCATGCATCA+TGG | + | chr8.1:72141649-72141668 | None:intergenic | 50.0% | |
| TCCATGATGCATGGCGATGA+TGG | - | chr8.1:72141645-72141664 | MS.gene066429:intron | 50.0% | |
| TGATCATGGCATAGCCGGTT+TGG | + | chr8.1:72144530-72144549 | None:intergenic | 50.0% | |
| TGATCCTCCCAATCCCTTCT+AGG | + | chr8.1:72142608-72142627 | None:intergenic | 50.0% | |
| TTAGAGGATGATGCCTGCTC+TGG | - | chr8.1:72143526-72143545 | MS.gene066429:CDS | 50.0% | |
| TTCGCCATGGTCACTCTACT+AGG | - | chr8.1:72140645-72140664 | MS.gene066429:CDS | 50.0% | |
| TTGTCAATCCAGAGGCTTGC+AGG | + | chr8.1:72144430-72144449 | None:intergenic | 50.0% | |
| ! | AGAGTACCACAGATGCATCC+GGG | - | chr8.1:72143467-72143486 | MS.gene066429:CDS | 50.0% |
| ! | ATTTTGTCCAACGTGTGCGG+CGG | + | chr8.1:72144725-72144744 | None:intergenic | 50.0% |
| !! | AAGATAAGGCGGGCTGTATG+TGG | - | chr8.1:72140600-72140619 | MS.gene066429:CDS | 50.0% |
| !! | AGATAAGGCGGGCTGTATGT+GGG | - | chr8.1:72140601-72140620 | MS.gene066429:CDS | 50.0% |
| !! | GAGAGTACCACAGATGCATC+CGG | - | chr8.1:72143466-72143485 | MS.gene066429:CDS | 50.0% |
| !! | GTTTGAGGCGTTGAGCGATA+TGG | - | chr8.1:72140979-72140998 | MS.gene066429:CDS | 50.0% |
| AAAGCAGTCCTGCAAGCCTC+TGG | - | chr8.1:72144419-72144438 | MS.gene066429:intron | 55.0% | |
| CGAAGCAGCAAGCACTCTGA+TGG | - | chr8.1:72140689-72140708 | MS.gene066429:CDS | 55.0% | |
| CTTTGCATCGCCAGCACTCA+AGG | - | chr8.1:72141553-72141572 | MS.gene066429:intron | 55.0% | |
| GCCAAGTCCAGTGTCTGTTC+TGG | - | chr8.1:72143492-72143511 | MS.gene066429:CDS | 55.0% | |
| GGGAACTCCAGATGTCAACC+TGG | - | chr8.1:72143547-72143566 | MS.gene066429:CDS | 55.0% | |
| GGTGCATCCAGAACAGACAC+TGG | + | chr8.1:72143502-72143521 | None:intergenic | 55.0% | |
| TCATGCACTCAGGCCCTGTT+TGG | - | chr8.1:72143577-72143596 | MS.gene066429:CDS | 55.0% | |
| ! | ACATCTGGAGTTCCCAGAGC+AGG | + | chr8.1:72143542-72143561 | None:intergenic | 55.0% |
| ! | TTTTGTCCAACGTGTGCGGC+GGG | + | chr8.1:72144724-72144743 | None:intergenic | 55.0% |
| !! | ACTGAGGCCAACTGGTTCTG+AGG | + | chr8.1:72142922-72142941 | None:intergenic | 55.0% |
| !! | GATAAGGCGGGCTGTATGTG+GGG | - | chr8.1:72140602-72140621 | MS.gene066429:CDS | 55.0% |
| GTACCACAGATGCATCCGGG+CGG | - | chr8.1:72143470-72143489 | MS.gene066429:CDS | 60.0% | |
| TTTGTCCAACGTGTGCGGCG+GGG | + | chr8.1:72144723-72144742 | None:intergenic | 60.0% | |
| AGACACTGGACTTGGCCGCC+CGG | + | chr8.1:72143488-72143507 | None:intergenic | 65.0% | |
| TTGTCCAACGTGTGCGGCGG+GGG | + | chr8.1:72144722-72144741 | None:intergenic | 65.0% | |
| TGGCCGCCCGGATGCATCTG+TGG | + | chr8.1:72143476-72143495 | None:intergenic | 70.0% | |
| ! | AACGTGTGCGGCGGGGGCAT+GGG | + | chr8.1:72144716-72144735 | None:intergenic | 70.0% |
| CAACGTGTGCGGCGGGGGCA+TGG | + | chr8.1:72144717-72144736 | None:intergenic | 75.0% | |
| CATGCCCCCGCCGCACACGT+TGG | - | chr8.1:72144715-72144734 | MS.gene066429:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 72140560 | 72144934 | 72140560 | ID=MS.gene066429 |
| chr8.1 | mRNA | 72140560 | 72144934 | 72140560 | ID=MS.gene066429.t1;Parent=MS.gene066429 |
| chr8.1 | exon | 72144784 | 72144934 | 72144784 | ID=MS.gene066429.t1.exon1;Parent=MS.gene066429.t1 |
| chr8.1 | CDS | 72144784 | 72144934 | 72144784 | ID=cds.MS.gene066429.t1;Parent=MS.gene066429.t1 |
| chr8.1 | exon | 72144470 | 72144540 | 72144470 | ID=MS.gene066429.t1.exon2;Parent=MS.gene066429.t1 |
| chr8.1 | CDS | 72144470 | 72144540 | 72144470 | ID=cds.MS.gene066429.t1;Parent=MS.gene066429.t1 |
| chr8.1 | exon | 72142718 | 72144173 | 72142718 | ID=MS.gene066429.t1.exon3;Parent=MS.gene066429.t1 |
| chr8.1 | CDS | 72142718 | 72144173 | 72142718 | ID=cds.MS.gene066429.t1;Parent=MS.gene066429.t1 |
| chr8.1 | exon | 72142478 | 72142617 | 72142478 | ID=MS.gene066429.t1.exon4;Parent=MS.gene066429.t1 |
| chr8.1 | CDS | 72142478 | 72142617 | 72142478 | ID=cds.MS.gene066429.t1;Parent=MS.gene066429.t1 |
| chr8.1 | exon | 72141926 | 72142097 | 72141926 | ID=MS.gene066429.t1.exon5;Parent=MS.gene066429.t1 |
| chr8.1 | CDS | 72141926 | 72142097 | 72141926 | ID=cds.MS.gene066429.t1;Parent=MS.gene066429.t1 |
| chr8.1 | exon | 72140560 | 72141194 | 72140560 | ID=MS.gene066429.t1.exon6;Parent=MS.gene066429.t1 |
| chr8.1 | CDS | 72140560 | 72141194 | 72140560 | ID=cds.MS.gene066429.t1;Parent=MS.gene066429.t1 |
| Gene Sequence |
| Protein sequence |
