Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060348.t1 | RHN64213.1 | 86 | 1015 | 61 | 4 | 4 | 949 | 2259 | 3261 | 0.00E+00 | 1481.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060348.t1 | G7JJ22 | 86.0 | 1015 | 61 | 4 | 4 | 949 | 2275 | 3277 | 0.0e+00 | 1481.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049343 | MS.gene060348 | 0.817403 | 3.36E-52 | -1.69E-46 |
| MS.gene056050 | MS.gene060348 | 0.803277 | 3.76E-49 | -1.69E-46 |
| MS.gene060348 | MS.gene060351 | 0.821641 | 3.62E-53 | -1.69E-46 |
| MS.gene060348 | MS.gene060352 | 0.954104 | 6.26E-112 | -1.69E-46 |
| MS.gene060348 | MS.gene060353 | 0.96108 | 2.74E-119 | -1.69E-46 |
| MS.gene060348 | MS.gene065889 | 0.80593 | 1.05E-49 | -1.69E-46 |
| MS.gene060348 | MS.gene066335 | 0.836902 | 7.13E-57 | -1.69E-46 |
| MS.gene060348 | MS.gene066429 | 0.814241 | 1.70E-51 | -1.69E-46 |
| MS.gene060348 | MS.gene069408 | 0.802896 | 4.51E-49 | -1.69E-46 |
| MS.gene060348 | MS.gene070582 | 0.827053 | 1.93E-54 | -1.69E-46 |
| MS.gene060348 | MS.gene07294 | 0.801265 | 9.77E-49 | -1.69E-46 |
| MS.gene060348 | MS.gene07298 | 0.813055 | 3.11E-51 | -1.69E-46 |
| MS.gene060348 | MS.gene07394 | 0.801141 | 1.04E-48 | -1.69E-46 |
| MS.gene060348 | MS.gene09600 | 0.807008 | 6.23E-50 | -1.69E-46 |
| MS.gene060348 | MS.gene20298 | 0.807022 | 6.19E-50 | -1.69E-46 |
| MS.gene060348 | MS.gene20809 | 0.805695 | 1.18E-49 | -1.69E-46 |
| MS.gene060348 | MS.gene21461 | 0.808839 | 2.54E-50 | -1.69E-46 |
| MS.gene060348 | MS.gene31022 | 0.833648 | 4.73E-56 | -1.69E-46 |
| MS.gene060348 | MS.gene32861 | 0.806475 | 8.08E-50 | -1.69E-46 |
| MS.gene060348 | MS.gene51189 | 0.801566 | 8.48E-49 | -1.69E-46 |
| MS.gene060348 | MS.gene51361 | 0.800304 | 1.53E-48 | -1.69E-46 |
| MS.gene060348 | MS.gene60171 | 0.83613 | 1.12E-56 | -1.69E-46 |
| MS.gene060348 | MS.gene60935 | 0.80572 | 1.16E-49 | -1.69E-46 |
| MS.gene060348 | MS.gene68029 | 0.804326 | 2.28E-49 | -1.69E-46 |
| MS.gene060348 | MS.gene72820 | 0.811802 | 5.84E-51 | -1.69E-46 |
| MS.gene060348 | MS.gene77789 | 0.806137 | 9.52E-50 | -1.69E-46 |
| MS.gene060348 | MS.gene81466 | 0.80585 | 1.09E-49 | -1.69E-46 |
| MS.gene060348 | MS.gene82962 | 0.804126 | 2.51E-49 | -1.69E-46 |
| MS.gene060348 | MS.gene84803 | 0.808984 | 2.37E-50 | -1.69E-46 |
| MS.gene060348 | MS.gene94679 | 0.82037 | 7.11E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060348.t1 | MTR_4g118720 | 86.163 | 1019 | 52 | 6 | 4 | 949 | 2275 | 3277 | 0.0 | 1619 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 234 sgRNAs with CRISPR-Local
Find 300 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAACTTTCTGTTGCTTATTT+TGG | 0.049093 | 8.4:-12825561 | None:intergenic |
| TTCTGAGCTTGAACAGCTTT+GGG | 0.175597 | 8.4:-12826930 | None:intergenic |
| CTTCTGAGCTTGAACAGCTT+TGG | 0.198133 | 8.4:-12826931 | None:intergenic |
| TCGACCGATGCTGAGGAATT+AGG | 0.208543 | 8.4:-12828560 | None:intergenic |
| TGGATTCCTCCATGTCATTC+TGG | 0.210361 | 8.4:-12827724 | None:intergenic |
| AGAAGTTAATTCCTTGCTTT+TGG | 0.214754 | 8.4:-12828226 | None:intergenic |
| TCATACAAGCTCTGCTCTTC+AGG | 0.217456 | 8.4:-12828875 | None:intergenic |
| GCTGATAACACTAGGTTATT+TGG | 0.228932 | 8.4:+12826570 | MS.gene060348:CDS |
| CCAATAGGATCATGAGATTT+AGG | 0.235640 | 8.4:-12825709 | None:intergenic |
| GGATTGTTACTATAAATTTC+CGG | 0.273162 | 8.4:-12826423 | None:intergenic |
| GTTGCAGAGGACATCCCTTT+TGG | 0.274645 | 8.4:-12828286 | None:intergenic |
| CCTAAATCTCATGATCCTAT+TGG | 0.283161 | 8.4:+12825709 | MS.gene060348:CDS |
| CATCTATATCCCTTCTTTCC+TGG | 0.284917 | 8.4:-12827025 | None:intergenic |
| ATTTCTCAGTTTCATATTCC+AGG | 0.285103 | 8.4:-12828910 | None:intergenic |
| TCACCAGAACAGATAGTTTC+AGG | 0.290014 | 8.4:-12826075 | None:intergenic |
| TGACTCTGAACCCTGCTTTA+TGG | 0.300700 | 8.4:-12826880 | None:intergenic |
| TCAGATAAGGCTGCTCCTTT+TGG | 0.303024 | 8.4:+12825616 | MS.gene060348:CDS |
| TCTTCTCCCGTTGGTATTGA+TGG | 0.326161 | 8.4:+12826372 | MS.gene060348:CDS |
| CTCTCTTGAGAGGGCATTGT+TGG | 0.329560 | 8.4:+12826747 | MS.gene060348:intron |
| TCTCTTGAGAGGGCATTGTT+GGG | 0.337451 | 8.4:+12826748 | MS.gene060348:intron |
| TCTTGCTTGTTCCCCTTCAC+TGG | 0.339605 | 8.4:-12825988 | None:intergenic |
| TCTAAACTTGGCTTTCCTTC+CGG | 0.342881 | 8.4:-12825925 | None:intergenic |
| TTCCCCTTCACTGGCATGGC+AGG | 0.345665 | 8.4:-12825979 | None:intergenic |
| GGATCATGAGATTTAGGCTT+TGG | 0.347434 | 8.4:-12825703 | None:intergenic |
| CGCTCTGCCTTCTTGCTCGC+TGG | 0.348500 | 8.4:+12827934 | MS.gene060348:CDS |
| AGAAAGCCATTCAATGTCTC+TGG | 0.349089 | 8.4:+12827541 | MS.gene060348:CDS |
| TCATCCTTCATTGTCCCAAT+TGG | 0.349156 | 8.4:+12827646 | MS.gene060348:CDS |
| GGATTCCTCCATGTCATTCT+GGG | 0.354862 | 8.4:-12827723 | None:intergenic |
| GAAGTGTTCTCTATAATATC+TGG | 0.375051 | 8.4:-12826501 | None:intergenic |
| AGATAATGATGTGTTAATTC+AGG | 0.379885 | 8.4:+12827964 | MS.gene060348:CDS |
| AGGCTTTGGCAAGCAAGTTC+CGG | 0.382676 | 8.4:-12825689 | None:intergenic |
| TGATGACTCATTTGGTAAAC+CGG | 0.387955 | 8.4:+12827580 | MS.gene060348:CDS |
| AATGATGAGCAAAAGATTGA+TGG | 0.392005 | 8.4:+12826186 | MS.gene060348:CDS |
| CTAAATCTCATGATCCTATT+GGG | 0.395094 | 8.4:+12825710 | MS.gene060348:CDS |
| TGAGATGGTTCATCAAATAA+AGG | 0.400520 | 8.4:+12828167 | MS.gene060348:CDS |
| AGTTTAGATGCGCCAACTAC+TGG | 0.401186 | 8.4:+12825940 | MS.gene060348:CDS |
| TTAGTGGGTGATCATAATCT+TGG | 0.405175 | 8.4:+12826315 | MS.gene060348:CDS |
| AATGAAGGATGAACAGTGTC+TGG | 0.413055 | 8.4:-12827635 | None:intergenic |
| ATTGAAGAGCTCATCTCCTT+TGG | 0.414967 | 8.4:+12827476 | MS.gene060348:intron |
| TGTTGCTGAGCCTCCTTTAG+TGG | 0.416512 | 8.4:+12826299 | MS.gene060348:CDS |
| TCAGACGGTTCTAATGCATC+TGG | 0.418232 | 8.4:-12826957 | None:intergenic |
| AGGATGCTCAACAAATCCTT+TGG | 0.419638 | 8.4:+12826398 | MS.gene060348:CDS |
| GTGGAGGATAAAGCATGTTC+TGG | 0.420822 | 8.4:+12825805 | MS.gene060348:CDS |
| TCACTGGCATGGCAGGTGCC+AGG | 0.420902 | 8.4:-12825972 | None:intergenic |
| CTTGTTCCCCTTCACTGGCA+TGG | 0.422002 | 8.4:-12825983 | None:intergenic |
| AAGCCTGAAACTATCTGTTC+TGG | 0.426087 | 8.4:+12826072 | MS.gene060348:CDS |
| TTTCTATCTTCGCTCCCAAT+AGG | 0.426364 | 8.4:-12825724 | None:intergenic |
| GGAAGCAAAAGTTGATATAG+TGG | 0.428057 | 8.4:+12827227 | MS.gene060348:CDS |
| TCTGATTTCTCCTGTGGTAA+AGG | 0.430463 | 8.4:-12828132 | None:intergenic |
| ACAATTTCTCTGATCTGCAT+TGG | 0.432368 | 8.4:-12827744 | None:intergenic |
| AAGAGCCTCCATTTCACTCT+TGG | 0.434925 | 8.4:-12826148 | None:intergenic |
| AACTACTGGAGCACCGAGCC+TGG | 0.439927 | 8.4:+12825954 | MS.gene060348:CDS |
| GGCTAACTGCTCTGGAGTCC+AGG | 0.441856 | 8.4:+12827203 | MS.gene060348:CDS |
| TAACACTAGGTTATTTGGTC+AGG | 0.442560 | 8.4:+12826575 | MS.gene060348:CDS |
| ATCAGAGAAATTGTTCTGAT+AGG | 0.442703 | 8.4:+12827753 | MS.gene060348:CDS |
| GGCATGGCAGGTGCCAGGCT+CGG | 0.443611 | 8.4:-12825967 | None:intergenic |
| AAGGCTGTGGCTAACTGCTC+TGG | 0.443829 | 8.4:+12827195 | MS.gene060348:CDS |
| ACTAAAGGAGGCTCAGCAAC+AGG | 0.444324 | 8.4:-12826297 | None:intergenic |
| TTGAGATACATTTGCAATCT+CGG | 0.447612 | 8.4:-12828534 | None:intergenic |
| CCTCTTGTGGATGAATCAAT+TGG | 0.448029 | 8.4:-12827261 | None:intergenic |
| CTAGAGGGAAGTTGTATAGA+TGG | 0.450093 | 8.4:+12828010 | MS.gene060348:CDS |
| AGGCTCGGTGCTCCAGTAGT+TGG | 0.450215 | 8.4:-12825952 | None:intergenic |
| TGACCAGTCTCGACTTCTAA+AGG | 0.453149 | 8.4:-12828470 | None:intergenic |
| GGCATCTGATATGCAGAATC+CGG | 0.453307 | 8.4:+12825906 | MS.gene060348:CDS |
| TCACCCTCAGGTTCAGAAAC+GGG | 0.458247 | 8.4:-12827881 | None:intergenic |
| CTCGACTACCAAGAGTGAAA+TGG | 0.459045 | 8.4:+12826140 | MS.gene060348:CDS |
| GAACACTTCTAATGAAAAGT+TGG | 0.459197 | 8.4:+12826515 | MS.gene060348:CDS |
| GCCTTCTTGCTCGCTGGTGA+AGG | 0.462218 | 8.4:+12827940 | MS.gene060348:CDS |
| AGAAAATGAAGAGAATCAAA+TGG | 0.463269 | 8.4:+12828323 | MS.gene060348:CDS |
| TTGTGCTCTGATGACTCATT+TGG | 0.465212 | 8.4:+12827572 | MS.gene060348:CDS |
| GTAGTTGGCGCATCTAAACT+TGG | 0.468680 | 8.4:-12825937 | None:intergenic |
| TTGTCTGAGAAGGATTCAAT+TGG | 0.469260 | 8.4:+12828707 | MS.gene060348:CDS |
| AAATAACGGCTCAGTCCCTC+TGG | 0.470354 | 8.4:+12827158 | MS.gene060348:CDS |
| AGCCTTTCTGGATCACCCTC+AGG | 0.472209 | 8.4:-12827893 | None:intergenic |
| CGAGCCTCCGAGTTTGAGCT+TGG | 0.472581 | 8.4:+12826812 | MS.gene060348:CDS |
| TCCTTCATTGTCCCAATTGG+AGG | 0.472888 | 8.4:+12827649 | MS.gene060348:CDS |
| CAGGGCGATGACTGTAAAGT+TGG | 0.473439 | 8.4:+12827333 | MS.gene060348:CDS |
| TTCTGGTGAAGTTAAAGAAA+AGG | 0.473608 | 8.4:+12826089 | MS.gene060348:CDS |
| GCTGGGGTAGTGTGTCAAAC+TGG | 0.477134 | 8.4:+12825838 | MS.gene060348:CDS |
| AGAAGTGGGGACCAGTCATC+AGG | 0.477546 | 8.4:+12827506 | MS.gene060348:CDS |
| GCTAAAATGCAGGCTGATGT+AGG | 0.478865 | 8.4:+12828626 | MS.gene060348:CDS |
| ACTTCTCTAAAGAGTCAGAT+TGG | 0.480330 | 8.4:-12826341 | None:intergenic |
| TAACAATCCCGAGTCTAGTC+AGG | 0.482920 | 8.4:+12826437 | MS.gene060348:CDS |
| AGTCCCTCGTCCAGGAAAGA+AGG | 0.485552 | 8.4:+12827015 | MS.gene060348:CDS |
| TTCCTCAGCATCGGTCGAAA+AGG | 0.486549 | 8.4:+12828565 | MS.gene060348:CDS |
| TATCCCTTCTTTCCTGGACG+AGG | 0.486678 | 8.4:-12827019 | None:intergenic |
| AAAGCTGCCGCGGATGCCTC+TGG | 0.486778 | 8.4:+12825772 | MS.gene060348:CDS |
| AAGTTGATGCATCACCCAAA+AGG | 0.488992 | 8.4:+12828271 | MS.gene060348:CDS |
| TTCAGAGTCAGCTTCTGAAA+AGG | 0.489098 | 8.4:+12826893 | MS.gene060348:CDS |
| GGATGCTCAACAAATCCTTT+GGG | 0.489136 | 8.4:+12826399 | MS.gene060348:CDS |
| TTTCTCAGTTTCATATTCCA+GGG | 0.491507 | 8.4:-12828909 | None:intergenic |
| GAAAGATTCTAAAATCGAGC+AGG | 0.492297 | 8.4:+12827314 | MS.gene060348:CDS |
| GAAAGATTCTAAAATCGAGC+AGG | 0.492297 | 8.4:+12827365 | MS.gene060348:CDS |
| GAAAGATTCTAAAATCGAGC+AGG | 0.492297 | 8.4:+12827419 | MS.gene060348:CDS |
| TTAGTTGTCACATGTACAAA+AGG | 0.493080 | 8.4:-12825751 | None:intergenic |
| TGGAGGAGGAAGAAAATGTC+GGG | 0.493921 | 8.4:+12827666 | MS.gene060348:CDS |
| GTTAATTCAGGACGAACAAA+AGG | 0.496497 | 8.4:+12827976 | MS.gene060348:CDS |
| CATACAAGCTCTGCTCTTCA+GGG | 0.497019 | 8.4:-12828874 | None:intergenic |
| CTCTGAACCCTGCTTTATGG+AGG | 0.497975 | 8.4:-12826877 | None:intergenic |
| TGATGTTGCAAGGGTAATGA+AGG | 0.501335 | 8.4:+12825657 | MS.gene060348:CDS |
| ATTAACTTCTTCGTCAGTGA+TGG | 0.504966 | 8.4:+12828239 | MS.gene060348:CDS |
| CTCAACAAATCCTTTGGGAC+CGG | 0.506910 | 8.4:+12826404 | MS.gene060348:CDS |
| CATTGCCAGTCCTTTACCAC+AGG | 0.507595 | 8.4:+12828122 | MS.gene060348:CDS |
| CTCTTGAGAGGGCATTGTTG+GGG | 0.508432 | 8.4:+12826749 | MS.gene060348:intron |
| GAAAGCCATTCAATGTCTCT+GGG | 0.509490 | 8.4:+12827542 | MS.gene060348:CDS |
| GGCACCTGCCATGCCAGTGA+AGG | 0.511485 | 8.4:+12825975 | MS.gene060348:CDS |
| ATCACCCTCAGGTTCAGAAA+CGG | 0.512036 | 8.4:-12827882 | None:intergenic |
| AGTTGATGCATCACCCAAAA+GGG | 0.515241 | 8.4:+12828272 | MS.gene060348:CDS |
| GACTGTGACATGGTTGATCC+AGG | 0.516379 | 8.4:+12828195 | MS.gene060348:CDS |
| CGCAGATGAACCTATCTCAT+GGG | 0.517768 | 8.4:-12826268 | None:intergenic |
| ACTAGAACCCTCCATAAAGC+AGG | 0.519042 | 8.4:+12826869 | MS.gene060348:CDS |
| GTTGCTGAGCCTCCTTTAGT+GGG | 0.521006 | 8.4:+12826300 | MS.gene060348:CDS |
| CAACTTCCCTCTAGAATCAA+AGG | 0.523856 | 8.4:-12828001 | None:intergenic |
| GATGGTTCAGAAGGTGATGC+AGG | 0.525689 | 8.4:-12826837 | None:intergenic |
| TGTGGCCGACAGTCACTAGA+TGG | 0.525915 | 8.4:-12827787 | None:intergenic |
| TGTTCTGGTATAGAAACTGC+TGG | 0.526353 | 8.4:+12825820 | MS.gene060348:CDS |
| AAAGGATCCTTTGATTCTAG+AGG | 0.526482 | 8.4:+12827994 | MS.gene060348:CDS |
| AGAATGCTCTGAAGCTGAGA+TGG | 0.526821 | 8.4:+12828152 | MS.gene060348:CDS |
| GCACCTGCCATGCCAGTGAA+GGG | 0.528060 | 8.4:+12825976 | MS.gene060348:CDS |
| CCCGTTGGTATTGATGGCAC+AGG | 0.530083 | 8.4:+12826378 | MS.gene060348:CDS |
| AGTCCCTCTGGAGAAGTCAA+TGG | 0.530393 | 8.4:+12827170 | MS.gene060348:CDS |
| ACAGGTGCACTGTCAATCCT+TGG | 0.533946 | 8.4:-12825589 | None:intergenic |
| GCAGCCTTATCTGAGGATAC+AGG | 0.535062 | 8.4:-12825607 | None:intergenic |
| GAGCATTCTGATTTCTCCTG+TGG | 0.536023 | 8.4:-12828138 | None:intergenic |
| CCCACTTCTGTCTTTACCAA+AGG | 0.539308 | 8.4:-12827492 | None:intergenic |
| AGATTATGATCACCCACTAA+AGG | 0.539380 | 8.4:-12826312 | None:intergenic |
| TGATCTGTGTGAGACTCCGC+TGG | 0.539380 | 8.4:+12826977 | MS.gene060348:CDS |
| CCTGTGCCATCAATACCAAC+GGG | 0.539456 | 8.4:-12826378 | None:intergenic |
| TCCTCCAATTGGGACAATGA+AGG | 0.540419 | 8.4:-12827650 | None:intergenic |
| CATTTCAGAGTCCCTCGTCC+AGG | 0.540756 | 8.4:+12827007 | MS.gene060348:CDS |
| TTGCTTGTGCTGATAACACT+AGG | 0.541351 | 8.4:+12826562 | MS.gene060348:CDS |
| CCTTTGGTAAAGACAGAAGT+GGG | 0.541599 | 8.4:+12827492 | MS.gene060348:CDS |
| TTCATTGTCCCAATTGGAGG+AGG | 0.544191 | 8.4:+12827652 | MS.gene060348:CDS |
| TGTATGAAATTCATGATCAA+AGG | 0.544662 | 8.4:+12828821 | MS.gene060348:CDS |
| AAAACAATCAGAAGGGGAAG+GGG | 0.544834 | 8.4:+12825885 | MS.gene060348:CDS |
| AAAATGTCAATGATGTTGCA+AGG | 0.544910 | 8.4:+12825647 | MS.gene060348:CDS |
| GTTTCAGGCTTACTGACGTT+AGG | 0.545429 | 8.4:-12826060 | None:intergenic |
| GAAGTCAATGGACAAGGCTG+TGG | 0.547098 | 8.4:+12827182 | MS.gene060348:CDS |
| CCGCAGATGAACCTATCTCA+TGG | 0.548665 | 8.4:-12826269 | None:intergenic |
| CTGTGGTAAAGGACTGGCAA+TGG | 0.548693 | 8.4:-12828121 | None:intergenic |
| AACAATCATTACCTGATGAC+TGG | 0.551613 | 8.4:-12827517 | None:intergenic |
| TCTGAACCCTGCTTTATGGA+GGG | 0.552368 | 8.4:-12826876 | None:intergenic |
| AACCTGAGGGTGATCCAGAA+AGG | 0.553280 | 8.4:+12827891 | MS.gene060348:CDS |
| AGCTCCTAATTCCTCAGCAT+CGG | 0.556937 | 8.4:+12828556 | MS.gene060348:CDS |
| TCTGAGCTTGAACAGCTTTG+GGG | 0.557245 | 8.4:-12826929 | None:intergenic |
| GCACAAGCAAAAGATGAAGA+TGG | 0.557851 | 8.4:-12826549 | None:intergenic |
| TTGGTAAAAGAACAAAATAA+CGG | 0.558717 | 8.4:+12827144 | MS.gene060348:CDS |
| GAATCAAATGGATGATAATG+AGG | 0.561262 | 8.4:+12828335 | MS.gene060348:CDS |
| CAAGCTCAAACTCGGAGGCT+CGG | 0.562042 | 8.4:-12826811 | None:intergenic |
| GTTATTAATTCATCAACTTG+AGG | 0.562549 | 8.4:-12827608 | None:intergenic |
| AAATGTCAATGATGTTGCAA+GGG | 0.562942 | 8.4:+12825648 | MS.gene060348:CDS |
| GTTCTGGTATAGAAACTGCT+GGG | 0.562996 | 8.4:+12825821 | MS.gene060348:CDS |
| ATGCAGGCTGATGTAGGAGA+TGG | 0.563305 | 8.4:+12828632 | MS.gene060348:CDS |
| TACTCCCGTTTCTGAACCTG+AGG | 0.565621 | 8.4:+12827877 | MS.gene060348:CDS |
| GAGGAAGGCTTATCTGAGAA+AGG | 0.566536 | 8.4:+12828587 | MS.gene060348:CDS |
| TGAAAGCACAGCTAAAATGC+AGG | 0.568502 | 8.4:+12828616 | MS.gene060348:CDS |
| AAGGATCCTTTGATTCTAGA+GGG | 0.568780 | 8.4:+12827995 | MS.gene060348:CDS |
| CTCAGCATCGGTCGAAAAGG+AGG | 0.569242 | 8.4:+12828568 | MS.gene060348:CDS |
| AACTTCTTCGTCAGTGATGG+AGG | 0.569897 | 8.4:+12828242 | MS.gene060348:CDS |
| TCCTGTGCCATCAATACCAA+CGG | 0.570340 | 8.4:-12826379 | None:intergenic |
| GGCTGATGTAGGAGATGGAA+TGG | 0.571153 | 8.4:+12828637 | MS.gene060348:CDS |
| CTATAAATTTCCGGTCCCAA+AGG | 0.573937 | 8.4:-12826414 | None:intergenic |
| GTATGAGAAAGAAGAAGCCC+TGG | 0.574291 | 8.4:+12828892 | MS.gene060348:CDS |
| GCTTGTTGAGTTGTCTGAGA+AGG | 0.575729 | 8.4:+12828697 | MS.gene060348:CDS |
| TGCACCTGTATCCTCAGATA+AGG | 0.576457 | 8.4:+12825603 | MS.gene060348:CDS |
| TCTGAGAGGCTTCGTACTAG+TGG | 0.577414 | 8.4:+12826213 | MS.gene060348:CDS |
| TGTTCAAGATCTTCTCCCGT+TGG | 0.578130 | 8.4:+12826363 | MS.gene060348:CDS |
| ATGCTTTATCCTCCACACTC+TGG | 0.578933 | 8.4:-12825798 | None:intergenic |
| AACAGAAAGTTGCATCGCCA+AGG | 0.581238 | 8.4:+12825572 | MS.gene060348:CDS |
| AAAGATGAAGATGGTTCAGA+AGG | 0.581341 | 8.4:-12826540 | None:intergenic |
| ATCCCTTCTTTCCTGGACGA+GGG | 0.582189 | 8.4:-12827018 | None:intergenic |
| TGCCTCTGGTAGCCAGAGTG+TGG | 0.583557 | 8.4:+12825786 | MS.gene060348:CDS |
| AAACATGATTCTTGAGAACA+TGG | 0.585403 | 8.4:+12826032 | MS.gene060348:CDS |
| AAGCCTTTAGAAGTCGAGAC+TGG | 0.586788 | 8.4:+12828467 | MS.gene060348:CDS |
| GCAGGATCCAAGCTCAAACT+CGG | 0.587307 | 8.4:-12826819 | None:intergenic |
| GATATCAGCCTGACTAGACT+CGG | 0.587355 | 8.4:-12826445 | None:intergenic |
| GAGGATGCATTGTCGATGAA+AGG | 0.587975 | 8.4:+12827815 | MS.gene060348:CDS |
| ACTAGTATATATGCCTCTTG+TGG | 0.591830 | 8.4:-12827274 | None:intergenic |
| GTCCCTCGTCCAGGAAAGAA+GGG | 0.592177 | 8.4:+12827016 | MS.gene060348:CDS |
| TAGCAGCAAGTGGGTTGCAG+AGG | 0.593160 | 8.4:-12828299 | None:intergenic |
| TTTCTCCTGTGGTAAAGGAC+TGG | 0.595886 | 8.4:-12828127 | None:intergenic |
| CAGACGGTTCTAATGCATCT+GGG | 0.596260 | 8.4:-12826956 | None:intergenic |
| CACCTGCCATGCCAGTGAAG+GGG | 0.600520 | 8.4:+12825977 | MS.gene060348:CDS |
| TCATCAACTTGAGGAACACC+CGG | 0.600754 | 8.4:-12827599 | None:intergenic |
| GAGTCAGCTTCTGAAAAGGA+AGG | 0.603647 | 8.4:+12826897 | MS.gene060348:CDS |
| CCAATTGATTCATCCACAAG+AGG | 0.604403 | 8.4:+12827261 | MS.gene060348:CDS |
| TCCTTTGGTAAAGACAGAAG+TGG | 0.607909 | 8.4:+12827491 | MS.gene060348:CDS |
| CTGGCTACCAGAGGCATCCG+CGG | 0.608323 | 8.4:-12825779 | None:intergenic |
| TGTCCATTGACTTCTCCAGA+GGG | 0.609356 | 8.4:-12827173 | None:intergenic |
| GCATCGGTCGAAAAGGAGGA+AGG | 0.611644 | 8.4:+12828572 | MS.gene060348:CDS |
| GCCGACAGTCACTAGATGGT+CGG | 0.612454 | 8.4:-12827783 | None:intergenic |
| GAGAGGCTTCGTACTAGTGG+TGG | 0.614117 | 8.4:+12826216 | MS.gene060348:CDS |
| AGGATTGACATCCAAAAGCA+AGG | 0.614984 | 8.4:+12828215 | MS.gene060348:CDS |
| GTCTGAATCCCAGAATGACA+TGG | 0.616023 | 8.4:+12827715 | MS.gene060348:CDS |
| TTGTCCATTGACTTCTCCAG+AGG | 0.618682 | 8.4:-12827174 | None:intergenic |
| TTGGAGGAGGAAGAAAATGT+CGG | 0.620149 | 8.4:+12827665 | MS.gene060348:CDS |
| TCCTTCACCAGCGAGCAAGA+AGG | 0.623740 | 8.4:-12827941 | None:intergenic |
| TTATGATCACCCACTAAAGG+AGG | 0.633029 | 8.4:-12826309 | None:intergenic |
| CTCTGGTAGCCAGAGTGTGG+AGG | 0.634467 | 8.4:+12825789 | MS.gene060348:CDS |
| TCTGAAATGCTCTCAACCAG+CGG | 0.635829 | 8.4:-12826993 | None:intergenic |
| ATATCAGCCTGACTAGACTC+GGG | 0.639044 | 8.4:-12826444 | None:intergenic |
| ATGAAGGATGAACAGTGTCT+GGG | 0.639187 | 8.4:-12827634 | None:intergenic |
| TCTGATATGCAGAATCCGGA+AGG | 0.640405 | 8.4:+12825910 | MS.gene060348:CDS |
| AAAGATTCTAAAATCGAGCA+GGG | 0.640934 | 8.4:+12827315 | MS.gene060348:CDS |
| AAAGATTCTAAAATCGAGCA+GGG | 0.640934 | 8.4:+12827366 | MS.gene060348:CDS |
| AAAGATTCTAAAATCGAGCA+GGG | 0.640934 | 8.4:+12827420 | MS.gene060348:CDS |
| GCAGATGAACCTATCTCATG+GGG | 0.642963 | 8.4:-12826267 | None:intergenic |
| AGATTGATGGCTCTTCTGAG+AGG | 0.644401 | 8.4:+12826199 | MS.gene060348:CDS |
| GACTGTCGGCCACACTAGTG+AGG | 0.645688 | 8.4:+12827796 | MS.gene060348:CDS |
| CTAGAACCCTCCATAAAGCA+GGG | 0.647279 | 8.4:+12826870 | MS.gene060348:CDS |
| TCTGGAGAAGTCAATGGACA+AGG | 0.648093 | 8.4:+12827176 | MS.gene060348:CDS |
| GATGACTCATTTGGTAAACC+GGG | 0.649443 | 8.4:+12827581 | MS.gene060348:CDS |
| TCCGACCATCTAGTGACTGT+CGG | 0.650244 | 8.4:+12827782 | MS.gene060348:CDS |
| CTCCACACTCTGGCTACCAG+AGG | 0.650342 | 8.4:-12825788 | None:intergenic |
| GGAGTCTCACACAGATCAGA+CGG | 0.651531 | 8.4:-12826972 | None:intergenic |
| ACAATGCATCCTCACTAGTG+TGG | 0.657647 | 8.4:-12827805 | None:intergenic |
| TGTGACAACTAAAGCTGCCG+CGG | 0.657829 | 8.4:+12825762 | MS.gene060348:CDS |
| TTCTGGTATAGAAACTGCTG+GGG | 0.664616 | 8.4:+12825822 | MS.gene060348:CDS |
| GACTACCAAGAGTGAAATGG+AGG | 0.667222 | 8.4:+12826143 | MS.gene060348:CDS |
| AAAAGGAGCAGCCTTATCTG+AGG | 0.670875 | 8.4:-12825614 | None:intergenic |
| AAGCCATTCAATGTCTCTGG+GGG | 0.672453 | 8.4:+12827544 | MS.gene060348:CDS |
| AGATGAACCTATCTCATGGG+GGG | 0.672525 | 8.4:-12826265 | None:intergenic |
| CGAGACTGGTCATCAAATCG+AGG | 0.673178 | 8.4:+12828481 | MS.gene060348:CDS |
| CCATGAGATAGGTTCATCTG+CGG | 0.679143 | 8.4:+12826269 | MS.gene060348:CDS |
| ACTCCCGTTTCTGAACCTGA+GGG | 0.686794 | 8.4:+12827878 | MS.gene060348:CDS |
| AAAGGTATCTGACTGTGACA+TGG | 0.689682 | 8.4:+12828185 | MS.gene060348:CDS |
| AAAGCCATTCAATGTCTCTG+GGG | 0.690664 | 8.4:+12827543 | MS.gene060348:CDS |
| GGATCCAAGCTCAAACTCGG+AGG | 0.694021 | 8.4:-12826816 | None:intergenic |
| TAACTGCTCTGGAGTCCAGG+AGG | 0.694682 | 8.4:+12827206 | MS.gene060348:CDS |
| GGAGGAGGAAGAAAATGTCG+GGG | 0.701016 | 8.4:+12827667 | MS.gene060348:CDS |
| TGAATCCCAGAATGACATGG+AGG | 0.724812 | 8.4:+12827718 | MS.gene060348:CDS |
| CAGATGAACCTATCTCATGG+GGG | 0.728068 | 8.4:-12826266 | None:intergenic |
| AAGTTGTATAGATGGCACCA+AGG | 0.735776 | 8.4:+12828018 | MS.gene060348:CDS |
| CTTTGGTAAAGACAGAAGTG+GGG | 0.747615 | 8.4:+12827493 | MS.gene060348:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GTTAATAGATTTTATTTAAT+TGG | - | chr8.4:12828434-12828453 | None:intergenic | 10.0% |
| !! | ATAAAATCTATTAACATTAC+AGG | + | chr8.4:12828439-12828458 | MS.gene060348:intron | 15.0% |
| !! | AATGAATTTGTGAAATTGAA+TGG | - | chr8.4:12828401-12828420 | None:intergenic | 20.0% |
| !! | TTGGTAAAAGAACAAAATAA+CGG | + | chr8.4:12827144-12827163 | MS.gene060348:CDS | 20.0% |
| !!! | TTCACAAATTCATTTCTTTT+GGG | + | chr8.4:12828407-12828426 | MS.gene060348:intron | 20.0% |
| !!! | TTTCACAAATTCATTTCTTT+TGG | + | chr8.4:12828406-12828425 | MS.gene060348:intron | 20.0% |
| ! | AGAAAATGAAGAGAATCAAA+TGG | + | chr8.4:12828323-12828342 | MS.gene060348:CDS | 25.0% |
| ! | AGATAATGATGTGTTAATTC+AGG | + | chr8.4:12827964-12827983 | MS.gene060348:CDS | 25.0% |
| ! | GAAATTGAATGGAAAATACA+AGG | - | chr8.4:12828390-12828409 | None:intergenic | 25.0% |
| ! | GGATTGTTACTATAAATTTC+CGG | - | chr8.4:12826426-12826445 | None:intergenic | 25.0% |
| ! | GTTATTAATTCATCAACTTG+AGG | - | chr8.4:12827611-12827630 | None:intergenic | 25.0% |
| ! | TGTATGAAATTCATGATCAA+AGG | + | chr8.4:12828821-12828840 | MS.gene060348:CDS | 25.0% |
| ! | TTGATGAAAAACAATCAGAA+GGG | + | chr8.4:12825878-12825897 | MS.gene060348:CDS | 25.0% |
| !! | CATCATTGACATTTTGTATT+CGG | - | chr8.4:12825642-12825661 | None:intergenic | 25.0% |
| !!! | AACTTTCTGTTGCTTATTTT+GGG | - | chr8.4:12825563-12825582 | None:intergenic | 25.0% |
| !!! | GTTATTTTGTTCTTTTACCA+AGG | - | chr8.4:12827145-12827164 | None:intergenic | 25.0% |
| AAAATGTCAATGATGTTGCA+AGG | + | chr8.4:12825647-12825666 | MS.gene060348:CDS | 30.0% | |
| AAACATGATTCTTGAGAACA+TGG | + | chr8.4:12826032-12826051 | MS.gene060348:CDS | 30.0% | |
| AAATGTCAATGATGTTGCAA+GGG | + | chr8.4:12825648-12825667 | MS.gene060348:CDS | 30.0% | |
| AATGATGAGCAAAAGATTGA+TGG | + | chr8.4:12826186-12826205 | MS.gene060348:CDS | 30.0% | |
| ATCAGAGAAATTGTTCTGAT+AGG | + | chr8.4:12827753-12827772 | MS.gene060348:CDS | 30.0% | |
| ATTTCTCAGTTTCATATTCC+AGG | - | chr8.4:12828913-12828932 | None:intergenic | 30.0% | |
| CTAAATCTCATGATCCTATT+GGG | + | chr8.4:12825710-12825729 | MS.gene060348:CDS | 30.0% | |
| GAACACTTCTAATGAAAAGT+TGG | + | chr8.4:12826515-12826534 | MS.gene060348:CDS | 30.0% | |
| GATAACTGTATAGTTGAAGT+TGG | + | chr8.4:12827444-12827463 | MS.gene060348:intron | 30.0% | |
| TGAGATGGTTCATCAAATAA+AGG | + | chr8.4:12828167-12828186 | MS.gene060348:CDS | 30.0% | |
| TGATGAAAAACAATCAGAAG+GGG | + | chr8.4:12825879-12825898 | MS.gene060348:CDS | 30.0% | |
| TTAGTTGTCACATGTACAAA+AGG | - | chr8.4:12825754-12825773 | None:intergenic | 30.0% | |
| TTCTGGTGAAGTTAAAGAAA+AGG | + | chr8.4:12826089-12826108 | MS.gene060348:CDS | 30.0% | |
| TTGAGATACATTTGCAATCT+CGG | - | chr8.4:12828537-12828556 | None:intergenic | 30.0% | |
| TTTCTCAGTTTCATATTCCA+GGG | - | chr8.4:12828912-12828931 | None:intergenic | 30.0% | |
| ! | AGAAGTTAATTCCTTGCTTT+TGG | - | chr8.4:12828229-12828248 | None:intergenic | 30.0% |
| ! | ATCTTTTGCTCATCATTAAG+AGG | - | chr8.4:12826183-12826202 | None:intergenic | 30.0% |
| ! | GAAGTGTTCTCTATAATATC+TGG | - | chr8.4:12826504-12826523 | None:intergenic | 30.0% |
| ! | GAATCAAATGGATGATAATG+AGG | + | chr8.4:12828335-12828354 | MS.gene060348:CDS | 30.0% |
| ! | GATGATAATGAGGTATTTCA+TGG | + | chr8.4:12828345-12828364 | MS.gene060348:intron | 30.0% |
| ! | GTTGATGAAAAACAATCAGA+AGG | + | chr8.4:12825877-12825896 | MS.gene060348:CDS | 30.0% |
| ! | GTTTTTATCAGATGCAATGT+CGG | - | chr8.4:12826016-12826035 | None:intergenic | 30.0% |
| ! | TTTTTAGATGTAAGCCTTTC+TGG | - | chr8.4:12827908-12827927 | None:intergenic | 30.0% |
| !! | AAAGATTCTAAAATCGAGCA+GGG | + | chr8.4:12827315-12827334 | MS.gene060348:CDS | 30.0% |
| !! | CAACTTTCTGTTGCTTATTT+TGG | - | chr8.4:12825564-12825583 | None:intergenic | 30.0% |
| AAAAACAATCAGAAGGGGAA+GGG | + | chr8.4:12825884-12825903 | MS.gene060348:CDS | 35.0% | |
| AAAGATGAAGATGGTTCAGA+AGG | - | chr8.4:12826543-12826562 | None:intergenic | 35.0% | |
| AAAGGATCCTTTGATTCTAG+AGG | + | chr8.4:12827994-12828013 | MS.gene060348:CDS | 35.0% | |
| AACAATCATTACCTGATGAC+TGG | - | chr8.4:12827520-12827539 | None:intergenic | 35.0% | |
| AACTACTATGTCCTTGATTG+AGG | - | chr8.4:12826654-12826673 | None:intergenic | 35.0% | |
| AAGGATCCTTTGATTCTAGA+GGG | + | chr8.4:12827995-12828014 | MS.gene060348:CDS | 35.0% | |
| ACAATTTCTCTGATCTGCAT+TGG | - | chr8.4:12827747-12827766 | None:intergenic | 35.0% | |
| ACTAGTATATATGCCTCTTG+TGG | - | chr8.4:12827277-12827296 | None:intergenic | 35.0% | |
| AGATTATGATCACCCACTAA+AGG | - | chr8.4:12826315-12826334 | None:intergenic | 35.0% | |
| ATTAACTTCTTCGTCAGTGA+TGG | + | chr8.4:12828239-12828258 | MS.gene060348:CDS | 35.0% | |
| CCAATAGGATCATGAGATTT+AGG | - | chr8.4:12825712-12825731 | None:intergenic | 35.0% | |
| CCTAAATCTCATGATCCTAT+TGG | + | chr8.4:12825709-12825728 | MS.gene060348:CDS | 35.0% | |
| GCTGATAACACTAGGTTATT+TGG | + | chr8.4:12826570-12826589 | MS.gene060348:CDS | 35.0% | |
| GTTAATTCAGGACGAACAAA+AGG | + | chr8.4:12827976-12827995 | MS.gene060348:CDS | 35.0% | |
| TAACACTAGGTTATTTGGTC+AGG | + | chr8.4:12826575-12826594 | MS.gene060348:CDS | 35.0% | |
| TGATGACTCATTTGGTAAAC+CGG | + | chr8.4:12827580-12827599 | MS.gene060348:CDS | 35.0% | |
| TTGTCTGAGAAGGATTCAAT+TGG | + | chr8.4:12828707-12828726 | MS.gene060348:CDS | 35.0% | |
| ! | ACATTTTGTATTCGGCCAAA+AGG | - | chr8.4:12825634-12825653 | None:intergenic | 35.0% |
| ! | ACTTCTCTAAAGAGTCAGAT+TGG | - | chr8.4:12826344-12826363 | None:intergenic | 35.0% |
| ! | ATTTTCTTCCTCCTCCAATT+GGG | - | chr8.4:12827663-12827682 | None:intergenic | 35.0% |
| ! | GTAATGAAGGAAGTTTTCTC+CGG | + | chr8.4:12825670-12825689 | MS.gene060348:CDS | 35.0% |
| ! | TGTTCTTTTACCAAGGTTGA+TGG | - | chr8.4:12827138-12827157 | None:intergenic | 35.0% |
| ! | TTAGTGGGTGATCATAATCT+TGG | + | chr8.4:12826315-12826334 | MS.gene060348:CDS | 35.0% |
| !! | GAAAGATTCTAAAATCGAGC+AGG | + | chr8.4:12827314-12827333 | MS.gene060348:CDS | 35.0% |
| !! | GATTTTGAAGATGGTTCAGA+AGG | - | chr8.4:12826849-12826868 | None:intergenic | 35.0% |
| !! | GGAAGCAAAAGTTGATATAG+TGG | + | chr8.4:12827227-12827246 | MS.gene060348:CDS | 35.0% |
| !! | GGTTCTAGTGATTTTGAAGA+TGG | - | chr8.4:12826858-12826877 | None:intergenic | 35.0% |
| !! | GTTCTTTTACCAAGGTTGAT+GGG | - | chr8.4:12827137-12827156 | None:intergenic | 35.0% |
| !!! | TTCTTTTACCAAGGTTGATG+GGG | - | chr8.4:12827136-12827155 | None:intergenic | 35.0% |
| AAAACAATCAGAAGGGGAAG+GGG | + | chr8.4:12825885-12825904 | MS.gene060348:CDS | 40.0% | |
| AAAGCCATTCAATGTCTCTG+GGG | + | chr8.4:12827543-12827562 | MS.gene060348:CDS | 40.0% | |
| AAGCCTGAAACTATCTGTTC+TGG | + | chr8.4:12826072-12826091 | MS.gene060348:CDS | 40.0% | |
| AAGTTGTATAGATGGCACCA+AGG | + | chr8.4:12828018-12828037 | MS.gene060348:CDS | 40.0% | |
| AATGAAGGATGAACAGTGTC+TGG | - | chr8.4:12827638-12827657 | None:intergenic | 40.0% | |
| AGAAAGCCATTCAATGTCTC+TGG | + | chr8.4:12827541-12827560 | MS.gene060348:CDS | 40.0% | |
| AGGATGCTCAACAAATCCTT+TGG | + | chr8.4:12826398-12826417 | MS.gene060348:CDS | 40.0% | |
| AGGATTGACATCCAAAAGCA+AGG | + | chr8.4:12828215-12828234 | MS.gene060348:CDS | 40.0% | |
| ATGAAGGATGAACAGTGTCT+GGG | - | chr8.4:12827637-12827656 | None:intergenic | 40.0% | |
| ATTGAAGAGCTCATCTCCTT+TGG | + | chr8.4:12827476-12827495 | MS.gene060348:intron | 40.0% | |
| CATCTATATCCCTTCTTTCC+TGG | - | chr8.4:12827028-12827047 | None:intergenic | 40.0% | |
| CCTCTTGTGGATGAATCAAT+TGG | - | chr8.4:12827264-12827283 | None:intergenic | 40.0% | |
| CCTTTGGTAAAGACAGAAGT+GGG | + | chr8.4:12827492-12827511 | MS.gene060348:CDS | 40.0% | |
| CTAGAGGGAAGTTGTATAGA+TGG | + | chr8.4:12828010-12828029 | MS.gene060348:CDS | 40.0% | |
| CTATAAATTTCCGGTCCCAA+AGG | - | chr8.4:12826417-12826436 | None:intergenic | 40.0% | |
| CTATGTCCTTGATTGAGGAT+CGG | - | chr8.4:12826649-12826668 | None:intergenic | 40.0% | |
| CTTTGGTAAAGACAGAAGTG+GGG | + | chr8.4:12827493-12827512 | MS.gene060348:CDS | 40.0% | |
| GAAAAACAATCAGAAGGGGA+AGG | + | chr8.4:12825883-12825902 | MS.gene060348:CDS | 40.0% | |
| GAAAGCCATTCAATGTCTCT+GGG | + | chr8.4:12827542-12827561 | MS.gene060348:CDS | 40.0% | |
| GATGACTCATTTGGTAAACC+GGG | + | chr8.4:12827581-12827600 | MS.gene060348:CDS | 40.0% | |
| GCACAAGCAAAAGATGAAGA+TGG | - | chr8.4:12826552-12826571 | None:intergenic | 40.0% | |
| GGATCATGAGATTTAGGCTT+TGG | - | chr8.4:12825706-12825725 | None:intergenic | 40.0% | |
| GGATGCTCAACAAATCCTTT+GGG | + | chr8.4:12826399-12826418 | MS.gene060348:CDS | 40.0% | |
| GTTCTGGTATAGAAACTGCT+GGG | + | chr8.4:12825821-12825840 | MS.gene060348:CDS | 40.0% | |
| TCACCAGAACAGATAGTTTC+AGG | - | chr8.4:12826078-12826097 | None:intergenic | 40.0% | |
| TCATCCTTCATTGTCCCAAT+TGG | + | chr8.4:12827646-12827665 | MS.gene060348:CDS | 40.0% | |
| TCCTTTGGTAAAGACAGAAG+TGG | + | chr8.4:12827491-12827510 | MS.gene060348:CDS | 40.0% | |
| TCTGATTTCTCCTGTGGTAA+AGG | - | chr8.4:12828135-12828154 | None:intergenic | 40.0% | |
| TGACTTTATCCCGACTTCAT+AGG | + | chr8.4:12828089-12828108 | MS.gene060348:intron | 40.0% | |
| TGATGTTGCAAGGGTAATGA+AGG | + | chr8.4:12825657-12825676 | MS.gene060348:CDS | 40.0% | |
| TGTTCTGGTATAGAAACTGC+TGG | + | chr8.4:12825820-12825839 | MS.gene060348:CDS | 40.0% | |
| TTATGATCACCCACTAAAGG+AGG | - | chr8.4:12826312-12826331 | None:intergenic | 40.0% | |
| TTCTGAGCTTGAACAGCTTT+GGG | - | chr8.4:12826933-12826952 | None:intergenic | 40.0% | |
| TTCTGGTATAGAAACTGCTG+GGG | + | chr8.4:12825822-12825841 | MS.gene060348:CDS | 40.0% | |
| TTGGAGGAGGAAGAAAATGT+CGG | + | chr8.4:12827665-12827684 | MS.gene060348:CDS | 40.0% | |
| TTGTGCTCTGATGACTCATT+TGG | + | chr8.4:12827572-12827591 | MS.gene060348:CDS | 40.0% | |
| TTTCTATCTTCGCTCCCAAT+AGG | - | chr8.4:12825727-12825746 | None:intergenic | 40.0% | |
| ! | AAGGTTCTAACATGTGCCAA+TGG | - | chr8.4:12828371-12828390 | None:intergenic | 40.0% |
| ! | AGTTGATGCATCACCCAAAA+GGG | + | chr8.4:12828272-12828291 | MS.gene060348:CDS | 40.0% |
| ! | ATGAGGTATTTCATGGCCAT+TGG | + | chr8.4:12828352-12828371 | MS.gene060348:intron | 40.0% |
| ! | CATTTTCTGTAGCAGCAAGT+GGG | - | chr8.4:12828311-12828330 | None:intergenic | 40.0% |
| ! | CATTTTCTTCCTCCTCCAAT+TGG | - | chr8.4:12827664-12827683 | None:intergenic | 40.0% |
| ! | CCAATTGATTCATCCACAAG+AGG | + | chr8.4:12827261-12827280 | MS.gene060348:CDS | 40.0% |
| ! | TATCAACTTTTGCTTCCTCC+TGG | - | chr8.4:12827224-12827243 | None:intergenic | 40.0% |
| ! | TCATTTTCTGTAGCAGCAAG+TGG | - | chr8.4:12828312-12828331 | None:intergenic | 40.0% |
| ! | TCTAAACTTGGCTTTCCTTC+CGG | - | chr8.4:12825928-12825947 | None:intergenic | 40.0% |
| ! | TGAAAGCACAGCTAAAATGC+AGG | + | chr8.4:12828616-12828635 | MS.gene060348:CDS | 40.0% |
| ! | TTCAGAGTCAGCTTCTGAAA+AGG | + | chr8.4:12826893-12826912 | MS.gene060348:CDS | 40.0% |
| ! | TTGCTTGTGCTGATAACACT+AGG | + | chr8.4:12826562-12826581 | MS.gene060348:CDS | 40.0% |
| !! | AAAGGTATCTGACTGTGACA+TGG | + | chr8.4:12828185-12828204 | MS.gene060348:CDS | 40.0% |
| !! | AAGTTGATGCATCACCCAAA+AGG | + | chr8.4:12828271-12828290 | MS.gene060348:CDS | 40.0% |
| !! | CAACTTCCCTCTAGAATCAA+AGG | - | chr8.4:12828004-12828023 | None:intergenic | 40.0% |
| !! | TTGCTTTTGGATGTCAATCC+TGG | - | chr8.4:12828216-12828235 | None:intergenic | 40.0% |
| !!! | TCTTTTACCAAGGTTGATGG+GGG | - | chr8.4:12827135-12827154 | None:intergenic | 40.0% |
| !!! | TTCTGTTGCTTATTTTGGGC+AGG | - | chr8.4:12825559-12825578 | None:intergenic | 40.0% |
| !!! | TTGCTTATTTTGGGCAGGAT+TGG | - | chr8.4:12825554-12825573 | None:intergenic | 40.0% |
| AACAGAAAGTTGCATCGCCA+AGG | + | chr8.4:12825572-12825591 | MS.gene060348:CDS | 45.0% | |
| AACTTCTTCGTCAGTGATGG+AGG | + | chr8.4:12828242-12828261 | MS.gene060348:CDS | 45.0% | |
| AAGAGCCTCCATTTCACTCT+TGG | - | chr8.4:12826151-12826170 | None:intergenic | 45.0% | |
| AAGCCATTCAATGTCTCTGG+GGG | + | chr8.4:12827544-12827563 | MS.gene060348:CDS | 45.0% | |
| AAGTCGGGATAAAGTCAGAG+AGG | - | chr8.4:12828086-12828105 | None:intergenic | 45.0% | |
| AAGTGCAACGTGACATACCT+TGG | - | chr8.4:12828038-12828057 | None:intergenic | 45.0% | |
| AATCCTGCACCTATGAAGTC+GGG | - | chr8.4:12828101-12828120 | None:intergenic | 45.0% | |
| ACAATGCATCCTCACTAGTG+TGG | - | chr8.4:12827808-12827827 | None:intergenic | 45.0% | |
| ACCAGAAACACCCACTGTAT+CGG | - | chr8.4:12827075-12827094 | None:intergenic | 45.0% | |
| ACTAGAACCCTCCATAAAGC+AGG | + | chr8.4:12826869-12826888 | MS.gene060348:CDS | 45.0% | |
| AGATGAACCTATCTCATGGG+GGG | - | chr8.4:12826268-12826287 | None:intergenic | 45.0% | |
| AGCTCCTAATTCCTCAGCAT+CGG | + | chr8.4:12828556-12828575 | MS.gene060348:CDS | 45.0% | |
| AGTCGGGATAAAGTCAGAGA+GGG | - | chr8.4:12828085-12828104 | None:intergenic | 45.0% | |
| AGTTTAGATGCGCCAACTAC+TGG | + | chr8.4:12825940-12825959 | MS.gene060348:CDS | 45.0% | |
| ATACCCCCAGAGACATTGAA+TGG | - | chr8.4:12827550-12827569 | None:intergenic | 45.0% | |
| ATATCAGCCTGACTAGACTC+GGG | - | chr8.4:12826447-12826466 | None:intergenic | 45.0% | |
| ATCACCCTCAGGTTCAGAAA+CGG | - | chr8.4:12827885-12827904 | None:intergenic | 45.0% | |
| ATGCTTTATCCTCCACACTC+TGG | - | chr8.4:12825801-12825820 | None:intergenic | 45.0% | |
| CAGATGAACCTATCTCATGG+GGG | - | chr8.4:12826269-12826288 | None:intergenic | 45.0% | |
| CATACAAGCTCTGCTCTTCA+GGG | - | chr8.4:12828877-12828896 | None:intergenic | 45.0% | |
| CCATGAGATAGGTTCATCTG+CGG | + | chr8.4:12826269-12826288 | MS.gene060348:CDS | 45.0% | |
| CCCACTTCTGTCTTTACCAA+AGG | - | chr8.4:12827495-12827514 | None:intergenic | 45.0% | |
| CGCAGATGAACCTATCTCAT+GGG | - | chr8.4:12826271-12826290 | None:intergenic | 45.0% | |
| CTAGAACCCTCCATAAAGCA+GGG | + | chr8.4:12826870-12826889 | MS.gene060348:CDS | 45.0% | |
| CTCGACTACCAAGAGTGAAA+TGG | + | chr8.4:12826140-12826159 | MS.gene060348:CDS | 45.0% | |
| CTTCTGAGCTTGAACAGCTT+TGG | - | chr8.4:12826934-12826953 | None:intergenic | 45.0% | |
| GAATCCTGCACCTATGAAGT+CGG | - | chr8.4:12828102-12828121 | None:intergenic | 45.0% | |
| GACTACCAAGAGTGAAATGG+AGG | + | chr8.4:12826143-12826162 | MS.gene060348:CDS | 45.0% | |
| GAGCATTCTGATTTCTCCTG+TGG | - | chr8.4:12828141-12828160 | None:intergenic | 45.0% | |
| GAGGAAGGCTTATCTGAGAA+AGG | + | chr8.4:12828587-12828606 | MS.gene060348:CDS | 45.0% | |
| GAGGATGCATTGTCGATGAA+AGG | + | chr8.4:12827815-12827834 | MS.gene060348:CDS | 45.0% | |
| GATATCAGCCTGACTAGACT+CGG | - | chr8.4:12826448-12826467 | None:intergenic | 45.0% | |
| GCAGATGAACCTATCTCATG+GGG | - | chr8.4:12826270-12826289 | None:intergenic | 45.0% | |
| GCTAAAATGCAGGCTGATGT+AGG | + | chr8.4:12828626-12828645 | MS.gene060348:CDS | 45.0% | |
| GGATTCCTCCATGTCATTCT+GGG | - | chr8.4:12827726-12827745 | None:intergenic | 45.0% | |
| GGCATCTGATATGCAGAATC+CGG | + | chr8.4:12825906-12825925 | MS.gene060348:CDS | 45.0% | |
| GGTCACAACAGCTTCACTTA+CGG | - | chr8.4:12827054-12827073 | None:intergenic | 45.0% | |
| GTAGTTGGCGCATCTAAACT+TGG | - | chr8.4:12825940-12825959 | None:intergenic | 45.0% | |
| GTATGAGAAAGAAGAAGCCC+TGG | + | chr8.4:12828892-12828911 | MS.gene060348:CDS | 45.0% | |
| GTCTGAATCCCAGAATGACA+TGG | + | chr8.4:12827715-12827734 | MS.gene060348:CDS | 45.0% | |
| GTGGAGGATAAAGCATGTTC+TGG | + | chr8.4:12825805-12825824 | MS.gene060348:CDS | 45.0% | |
| GTTTCAGGCTTACTGACGTT+AGG | - | chr8.4:12826063-12826082 | None:intergenic | 45.0% | |
| TAACAATCCCGAGTCTAGTC+AGG | + | chr8.4:12826437-12826456 | MS.gene060348:CDS | 45.0% | |
| TCATACAAGCTCTGCTCTTC+AGG | - | chr8.4:12828878-12828897 | None:intergenic | 45.0% | |
| TCATCAACTTGAGGAACACC+CGG | - | chr8.4:12827602-12827621 | None:intergenic | 45.0% | |
| TCCTCCAATTGGGACAATGA+AGG | - | chr8.4:12827653-12827672 | None:intergenic | 45.0% | |
| TCCTGTGCCATCAATACCAA+CGG | - | chr8.4:12826382-12826401 | None:intergenic | 45.0% | |
| TCCTTCATTGTCCCAATTGG+AGG | + | chr8.4:12827649-12827668 | MS.gene060348:CDS | 45.0% | |
| TCTGAACCCTGCTTTATGGA+GGG | - | chr8.4:12826879-12826898 | None:intergenic | 45.0% | |
| TCTGAGCTTGAACAGCTTTG+GGG | - | chr8.4:12826932-12826951 | None:intergenic | 45.0% | |
| TCTGATATGCAGAATCCGGA+AGG | + | chr8.4:12825910-12825929 | MS.gene060348:CDS | 45.0% | |
| TCTGGAGAAGTCAATGGACA+AGG | + | chr8.4:12827176-12827195 | MS.gene060348:CDS | 45.0% | |
| TGAATCCCAGAATGACATGG+AGG | + | chr8.4:12827718-12827737 | MS.gene060348:CDS | 45.0% | |
| TGACCAGTCTCGACTTCTAA+AGG | - | chr8.4:12828473-12828492 | None:intergenic | 45.0% | |
| TGACTCTGAACCCTGCTTTA+TGG | - | chr8.4:12826883-12826902 | None:intergenic | 45.0% | |
| TGCACCTGTATCCTCAGATA+AGG | + | chr8.4:12825603-12825622 | MS.gene060348:CDS | 45.0% | |
| TGCTGAACTCTCTCTTGAGA+GGG | + | chr8.4:12826738-12826757 | MS.gene060348:intron | 45.0% | |
| TGGAGGAGGAAGAAAATGTC+GGG | + | chr8.4:12827666-12827685 | MS.gene060348:CDS | 45.0% | |
| TGGATTCCTCCATGTCATTC+TGG | - | chr8.4:12827727-12827746 | None:intergenic | 45.0% | |
| TGTTCAAGATCTTCTCCCGT+TGG | + | chr8.4:12826363-12826382 | MS.gene060348:CDS | 45.0% | |
| TTCATTGTCCCAATTGGAGG+AGG | + | chr8.4:12827652-12827671 | MS.gene060348:CDS | 45.0% | |
| TTTCTCCTGTGGTAAAGGAC+TGG | - | chr8.4:12828130-12828149 | None:intergenic | 45.0% | |
| ! | AAAAGGAGCAGCCTTATCTG+AGG | - | chr8.4:12825617-12825636 | None:intergenic | 45.0% |
| ! | AAGCCTTTAGAAGTCGAGAC+TGG | + | chr8.4:12828467-12828486 | MS.gene060348:CDS | 45.0% |
| ! | AGATTGATGGCTCTTCTGAG+AGG | + | chr8.4:12826199-12826218 | MS.gene060348:CDS | 45.0% |
| ! | CAGACGGTTCTAATGCATCT+GGG | - | chr8.4:12826959-12826978 | None:intergenic | 45.0% |
| ! | GAGTCAGCTTCTGAAAAGGA+AGG | + | chr8.4:12826897-12826916 | MS.gene060348:CDS | 45.0% |
| ! | GCTTGTTGAGTTGTCTGAGA+AGG | + | chr8.4:12828697-12828716 | MS.gene060348:CDS | 45.0% |
| ! | TCAGACGGTTCTAATGCATC+TGG | - | chr8.4:12826960-12826979 | None:intergenic | 45.0% |
| ! | TCAGATAAGGCTGCTCCTTT+TGG | + | chr8.4:12825616-12825635 | MS.gene060348:CDS | 45.0% |
| ! | TCTGAAATGCTCTCAACCAG+CGG | - | chr8.4:12826996-12827015 | None:intergenic | 45.0% |
| ! | TCTTCTCCCGTTGGTATTGA+TGG | + | chr8.4:12826372-12826391 | MS.gene060348:CDS | 45.0% |
| ! | TTGCAGAGGACATCCCTTTT+GGG | - | chr8.4:12828288-12828307 | None:intergenic | 45.0% |
| !! | AGAATGCTCTGAAGCTGAGA+TGG | + | chr8.4:12828152-12828171 | MS.gene060348:CDS | 45.0% |
| !! | CTCAACAAATCCTTTGGGAC+CGG | + | chr8.4:12826404-12826423 | MS.gene060348:CDS | 45.0% |
| !! | TCTCTTGAGAGGGCATTGTT+GGG | + | chr8.4:12826748-12826767 | MS.gene060348:intron | 45.0% |
| !! | TGTCCATTGACTTCTCCAGA+GGG | - | chr8.4:12827176-12827195 | None:intergenic | 45.0% |
| !! | TTGTCCATTGACTTCTCCAG+AGG | - | chr8.4:12827177-12827196 | None:intergenic | 45.0% |
| !!! | CTTATTTTGGGCAGGATTGG+TGG | - | chr8.4:12825551-12825570 | None:intergenic | 45.0% |
| AAATAACGGCTCAGTCCCTC+TGG | + | chr8.4:12827158-12827177 | MS.gene060348:CDS | 50.0% | |
| AACCTGAGGGTGATCCAGAA+AGG | + | chr8.4:12827891-12827910 | MS.gene060348:CDS | 50.0% | |
| ACAGGTGCACTGTCAATCCT+TGG | - | chr8.4:12825592-12825611 | None:intergenic | 50.0% | |
| ACCGATACAGTGGGTGTTTC+TGG | + | chr8.4:12827071-12827090 | MS.gene060348:intron | 50.0% | |
| ACTAAAGGAGGCTCAGCAAC+AGG | - | chr8.4:12826300-12826319 | None:intergenic | 50.0% | |
| ACTCCCGTTTCTGAACCTGA+GGG | + | chr8.4:12827878-12827897 | MS.gene060348:CDS | 50.0% | |
| AGCTGTTGTGACCGATACAG+TGG | + | chr8.4:12827061-12827080 | MS.gene060348:intron | 50.0% | |
| AGTTCTACCCCCATCAACCT+TGG | + | chr8.4:12827125-12827144 | MS.gene060348:intron | 50.0% | |
| ATCCCTTCTTTCCTGGACGA+GGG | - | chr8.4:12827021-12827040 | None:intergenic | 50.0% | |
| ATGCAGGCTGATGTAGGAGA+TGG | + | chr8.4:12828632-12828651 | MS.gene060348:CDS | 50.0% | |
| CAGGGCGATGACTGTAAAGT+TGG | + | chr8.4:12827333-12827352 | MS.gene060348:CDS | 50.0% | |
| CATTGCCAGTCCTTTACCAC+AGG | + | chr8.4:12828122-12828141 | MS.gene060348:CDS | 50.0% | |
| CCGCAGATGAACCTATCTCA+TGG | - | chr8.4:12826272-12826291 | None:intergenic | 50.0% | |
| CCTGTGCCATCAATACCAAC+GGG | - | chr8.4:12826381-12826400 | None:intergenic | 50.0% | |
| CTCTGAACCCTGCTTTATGG+AGG | - | chr8.4:12826880-12826899 | None:intergenic | 50.0% | |
| CTGCAACCGATCCTCAATCA+AGG | + | chr8.4:12826640-12826659 | MS.gene060348:intron | 50.0% | |
| CTGCTGAACTCTCTCTTGAG+AGG | + | chr8.4:12826737-12826756 | MS.gene060348:intron | 50.0% | |
| CTTGATTGAGGATCGGTTGC+AGG | - | chr8.4:12826642-12826661 | None:intergenic | 50.0% | |
| GAAGTCAATGGACAAGGCTG+TGG | + | chr8.4:12827182-12827201 | MS.gene060348:CDS | 50.0% | |
| GACTGTGACATGGTTGATCC+AGG | + | chr8.4:12828195-12828214 | MS.gene060348:CDS | 50.0% | |
| GATGGTTCAGAAGGTGATGC+AGG | - | chr8.4:12826840-12826859 | None:intergenic | 50.0% | |
| GCAGGATCCAAGCTCAAACT+CGG | - | chr8.4:12826822-12826841 | None:intergenic | 50.0% | |
| GCTGTTGTGACCGATACAGT+GGG | + | chr8.4:12827062-12827081 | MS.gene060348:intron | 50.0% | |
| GGAGGAGGAAGAAAATGTCG+GGG | + | chr8.4:12827667-12827686 | MS.gene060348:CDS | 50.0% | |
| GGAGTCTCACACAGATCAGA+CGG | - | chr8.4:12826975-12826994 | None:intergenic | 50.0% | |
| GGCTGATGTAGGAGATGGAA+TGG | + | chr8.4:12828637-12828656 | MS.gene060348:CDS | 50.0% | |
| GTTGCTGAGCCTCCTTTAGT+GGG | + | chr8.4:12826300-12826319 | MS.gene060348:CDS | 50.0% | |
| TACTCCCGTTTCTGAACCTG+AGG | + | chr8.4:12827877-12827896 | MS.gene060348:CDS | 50.0% | |
| TATCCCGACTTCATAGGTGC+AGG | + | chr8.4:12828095-12828114 | MS.gene060348:intron | 50.0% | |
| TATCCCTTCTTTCCTGGACG+AGG | - | chr8.4:12827022-12827041 | None:intergenic | 50.0% | |
| TCACCCTCAGGTTCAGAAAC+GGG | - | chr8.4:12827884-12827903 | None:intergenic | 50.0% | |
| TCCGACCATCTAGTGACTGT+CGG | + | chr8.4:12827782-12827801 | MS.gene060348:CDS | 50.0% | |
| TCGACCGATGCTGAGGAATT+AGG | - | chr8.4:12828563-12828582 | None:intergenic | 50.0% | |
| TCTGAGAGGCTTCGTACTAG+TGG | + | chr8.4:12826213-12826232 | MS.gene060348:CDS | 50.0% | |
| TCTTGCTTGTTCCCCTTCAC+TGG | - | chr8.4:12825991-12826010 | None:intergenic | 50.0% | |
| TGTGACAACTAAAGCTGCCG+CGG | + | chr8.4:12825762-12825781 | MS.gene060348:CDS | 50.0% | |
| TGTTGCTGAGCCTCCTTTAG+TGG | + | chr8.4:12826299-12826318 | MS.gene060348:CDS | 50.0% | |
| ! | AGGCTTTGGCAAGCAAGTTC+CGG | - | chr8.4:12825692-12825711 | None:intergenic | 50.0% |
| ! | AGTCCCTCTGGAGAAGTCAA+TGG | + | chr8.4:12827170-12827189 | MS.gene060348:CDS | 50.0% |
| ! | CGAGACTGGTCATCAAATCG+AGG | + | chr8.4:12828481-12828500 | MS.gene060348:CDS | 50.0% |
| ! | CTGTGGTAAAGGACTGGCAA+TGG | - | chr8.4:12828124-12828143 | None:intergenic | 50.0% |
| ! | GCAGCCTTATCTGAGGATAC+AGG | - | chr8.4:12825610-12825629 | None:intergenic | 50.0% |
| ! | GTTGCAGAGGACATCCCTTT+TGG | - | chr8.4:12828289-12828308 | None:intergenic | 50.0% |
| !! | ACAGTGGGTGTTTCTGGTCT+TGG | + | chr8.4:12827077-12827096 | MS.gene060348:intron | 50.0% |
| !! | AGTGGGTGTTTCTGGTCTTG+GGG | + | chr8.4:12827079-12827098 | MS.gene060348:intron | 50.0% |
| !! | CAGTGGGTGTTTCTGGTCTT+GGG | + | chr8.4:12827078-12827097 | MS.gene060348:intron | 50.0% |
| !! | CTCTCTTGAGAGGGCATTGT+TGG | + | chr8.4:12826747-12826766 | MS.gene060348:intron | 50.0% |
| !! | CTCTTGAGAGGGCATTGTTG+GGG | + | chr8.4:12826749-12826768 | MS.gene060348:intron | 50.0% |
| !! | TTCCTCAGCATCGGTCGAAA+AGG | + | chr8.4:12828565-12828584 | MS.gene060348:CDS | 50.0% |
| AAGGCTGTGGCTAACTGCTC+TGG | + | chr8.4:12827195-12827214 | MS.gene060348:CDS | 55.0% | |
| AGAAGTGGGGACCAGTCATC+AGG | + | chr8.4:12827506-12827525 | MS.gene060348:CDS | 55.0% | |
| AGCCTTTCTGGATCACCCTC+AGG | - | chr8.4:12827896-12827915 | None:intergenic | 55.0% | |
| AGTCCCTCGTCCAGGAAAGA+AGG | + | chr8.4:12827015-12827034 | MS.gene060348:CDS | 55.0% | |
| CAAGCTCAAACTCGGAGGCT+CGG | - | chr8.4:12826814-12826833 | None:intergenic | 55.0% | |
| CATTTCAGAGTCCCTCGTCC+AGG | + | chr8.4:12827007-12827026 | MS.gene060348:CDS | 55.0% | |
| CTTGTTCCCCTTCACTGGCA+TGG | - | chr8.4:12825986-12826005 | None:intergenic | 55.0% | |
| GAGAGGCTTCGTACTAGTGG+TGG | + | chr8.4:12826216-12826235 | MS.gene060348:CDS | 55.0% | |
| GCCGACAGTCACTAGATGGT+CGG | - | chr8.4:12827786-12827805 | None:intergenic | 55.0% | |
| GCTGGGGTAGTGTGTCAAAC+TGG | + | chr8.4:12825838-12825857 | MS.gene060348:CDS | 55.0% | |
| GGATCCAAGCTCAAACTCGG+AGG | - | chr8.4:12826819-12826838 | None:intergenic | 55.0% | |
| GTCCCTCGTCCAGGAAAGAA+GGG | + | chr8.4:12827016-12827035 | MS.gene060348:CDS | 55.0% | |
| TCCTTCACCAGCGAGCAAGA+AGG | - | chr8.4:12827944-12827963 | None:intergenic | 55.0% | |
| TGAGGATCGGTTGCAGGACT+AGG | - | chr8.4:12826636-12826655 | None:intergenic | 55.0% | |
| TGATCTGTGTGAGACTCCGC+TGG | + | chr8.4:12826977-12826996 | MS.gene060348:CDS | 55.0% | |
| TGTGGCCGACAGTCACTAGA+TGG | - | chr8.4:12827790-12827809 | None:intergenic | 55.0% | |
| ! | CTCCTTTTCGACCGATGCTG+AGG | - | chr8.4:12828570-12828589 | None:intergenic | 55.0% |
| ! | GCATCGGTCGAAAAGGAGGA+AGG | + | chr8.4:12828572-12828591 | MS.gene060348:CDS | 55.0% |
| !! | CCCGTTGGTATTGATGGCAC+AGG | + | chr8.4:12826378-12826397 | MS.gene060348:CDS | 55.0% |
| !! | CTCAGCATCGGTCGAAAAGG+AGG | + | chr8.4:12828568-12828587 | MS.gene060348:CDS | 55.0% |
| !! | GTGGGTGTTTCTGGTCTTGG+GGG | + | chr8.4:12827080-12827099 | MS.gene060348:intron | 55.0% |
| !! | TAACTGCTCTGGAGTCCAGG+AGG | + | chr8.4:12827206-12827225 | MS.gene060348:CDS | 55.0% |
| !! | TAGCAGCAAGTGGGTTGCAG+AGG | - | chr8.4:12828302-12828321 | None:intergenic | 55.0% |
| !! | TGGGTGTTTCTGGTCTTGGG+GGG | + | chr8.4:12827081-12827100 | MS.gene060348:intron | 55.0% |
| CACCTGCCATGCCAGTGAAG+GGG | + | chr8.4:12825977-12825996 | MS.gene060348:CDS | 60.0% | |
| CGAGCCTCCGAGTTTGAGCT+TGG | + | chr8.4:12826812-12826831 | MS.gene060348:CDS | 60.0% | |
| CTCCACACTCTGGCTACCAG+AGG | - | chr8.4:12825791-12825810 | None:intergenic | 60.0% | |
| CTCTGGTAGCCAGAGTGTGG+AGG | + | chr8.4:12825789-12825808 | MS.gene060348:CDS | 60.0% | |
| GACTGTCGGCCACACTAGTG+AGG | + | chr8.4:12827796-12827815 | MS.gene060348:CDS | 60.0% | |
| GAGACAGCCCCCCATGAGAT+AGG | + | chr8.4:12826258-12826277 | MS.gene060348:CDS | 60.0% | |
| GCACCTGCCATGCCAGTGAA+GGG | + | chr8.4:12825976-12825995 | MS.gene060348:CDS | 60.0% | |
| GCCTTCTTGCTCGCTGGTGA+AGG | + | chr8.4:12827940-12827959 | MS.gene060348:CDS | 60.0% | |
| GGATCGGTTGCAGGACTAGG+TGG | - | chr8.4:12826633-12826652 | None:intergenic | 60.0% | |
| TGCCTCTGGTAGCCAGAGTG+TGG | + | chr8.4:12825786-12825805 | MS.gene060348:CDS | 60.0% | |
| TTCCCCTTCACTGGCATGGC+AGG | - | chr8.4:12825982-12826001 | None:intergenic | 60.0% | |
| !! | AACTACTGGAGCACCGAGCC+TGG | + | chr8.4:12825954-12825973 | MS.gene060348:CDS | 60.0% |
| !! | AGGCTCGGTGCTCCAGTAGT+TGG | - | chr8.4:12825955-12825974 | None:intergenic | 60.0% |
| !! | GGCTAACTGCTCTGGAGTCC+AGG | + | chr8.4:12827203-12827222 | MS.gene060348:CDS | 60.0% |
| !! | GGGTGTTTCTGGTCTTGGGG+GGG | + | chr8.4:12827082-12827101 | MS.gene060348:intron | 60.0% |
| !! | GGTGTTTCTGGTCTTGGGGG+GGG | + | chr8.4:12827083-12827102 | MS.gene060348:intron | 60.0% |
| AAAGCTGCCGCGGATGCCTC+TGG | + | chr8.4:12825772-12825791 | MS.gene060348:CDS | 65.0% | |
| CGCTCTGCCTTCTTGCTCGC+TGG | + | chr8.4:12827934-12827953 | MS.gene060348:CDS | 65.0% | |
| GGCACCTGCCATGCCAGTGA+AGG | + | chr8.4:12825975-12825994 | MS.gene060348:CDS | 65.0% | |
| TCACTGGCATGGCAGGTGCC+AGG | - | chr8.4:12825975-12825994 | None:intergenic | 65.0% | |
| !! | CTGGCTACCAGAGGCATCCG+CGG | - | chr8.4:12825782-12825801 | None:intergenic | 65.0% |
| GGCATGGCAGGTGCCAGGCT+CGG | - | chr8.4:12825970-12825989 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 12825526 | 12828934 | 12825526 | ID=MS.gene060348 |
| chr8.4 | mRNA | 12825526 | 12828934 | 12825526 | ID=MS.gene060348.t1;Parent=MS.gene060348 |
| chr8.4 | exon | 12825526 | 12826623 | 12825526 | ID=MS.gene060348.t1.exon1;Parent=MS.gene060348.t1 |
| chr8.4 | CDS | 12825526 | 12826623 | 12825526 | ID=cds.MS.gene060348.t1;Parent=MS.gene060348.t1 |
| chr8.4 | exon | 12826759 | 12827056 | 12826759 | ID=MS.gene060348.t1.exon2;Parent=MS.gene060348.t1 |
| chr8.4 | CDS | 12826759 | 12827056 | 12826759 | ID=cds.MS.gene060348.t1;Parent=MS.gene060348.t1 |
| chr8.4 | exon | 12827127 | 12827455 | 12827127 | ID=MS.gene060348.t1.exon3;Parent=MS.gene060348.t1 |
| chr8.4 | CDS | 12827127 | 12827455 | 12827127 | ID=cds.MS.gene060348.t1;Parent=MS.gene060348.t1 |
| chr8.4 | exon | 12827485 | 12828039 | 12827485 | ID=MS.gene060348.t1.exon4;Parent=MS.gene060348.t1 |
| chr8.4 | CDS | 12827485 | 12828039 | 12827485 | ID=cds.MS.gene060348.t1;Parent=MS.gene060348.t1 |
| chr8.4 | exon | 12828111 | 12828356 | 12828111 | ID=MS.gene060348.t1.exon5;Parent=MS.gene060348.t1 |
| chr8.4 | CDS | 12828111 | 12828356 | 12828111 | ID=cds.MS.gene060348.t1;Parent=MS.gene060348.t1 |
| chr8.4 | exon | 12828461 | 12828934 | 12828461 | ID=MS.gene060348.t1.exon6;Parent=MS.gene060348.t1 |
| chr8.4 | CDS | 12828461 | 12828934 | 12828461 | ID=cds.MS.gene060348.t1;Parent=MS.gene060348.t1 |
| Gene Sequence |
| Protein sequence |
