Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066435.t1 | RHN39888.1 | 97.1 | 345 | 9 | 1 | 1 | 344 | 6 | 350 | 4.40E-161 | 577.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066435.t1 | Q8LF97 | 65.5 | 354 | 97 | 8 | 1 | 344 | 6 | 344 | 1.6e-103 | 377.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066435.t1 | G7LBR1 | 97.1 | 345 | 9 | 1 | 1 | 344 | 6 | 350 | 3.2e-161 | 577.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051525 | MS.gene066435 | 0.810263 | 1.26E-50 | -1.69E-46 |
| MS.gene056297 | MS.gene066435 | 0.803671 | 3.12E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066435.t1 | MTR_8g030670 | 97.391 | 345 | 8 | 1 | 1 | 344 | 6 | 350 | 0.0 | 684 |
| MS.gene066435.t1 | MTR_7g077810 | 74.277 | 346 | 78 | 5 | 1 | 344 | 6 | 342 | 3.73e-164 | 462 |
| MS.gene066435.t1 | MTR_2g100825 | 68.827 | 324 | 77 | 8 | 7 | 327 | 5 | 307 | 1.85e-131 | 377 |
| MS.gene066435.t1 | MTR_6g053620 | 59.130 | 345 | 138 | 3 | 1 | 344 | 6 | 348 | 3.98e-129 | 373 |
| MS.gene066435.t1 | MTR_2g100830 | 64.634 | 328 | 91 | 8 | 7 | 328 | 5 | 313 | 2.85e-123 | 357 |
| MS.gene066435.t1 | MTR_6g053620 | 59.801 | 301 | 119 | 2 | 1 | 300 | 6 | 305 | 6.20e-113 | 332 |
| MS.gene066435.t1 | MTR_8g007185 | 61.682 | 321 | 78 | 6 | 5 | 321 | 3 | 282 | 2.02e-109 | 321 |
| MS.gene066435.t1 | MTR_8g007205 | 61.371 | 321 | 79 | 6 | 5 | 321 | 3 | 282 | 9.52e-109 | 319 |
| MS.gene066435.t1 | MTR_8g007195 | 54.878 | 328 | 120 | 10 | 3 | 321 | 1 | 309 | 2.97e-88 | 268 |
| MS.gene066435.t1 | MTR_8g007220 | 48.598 | 321 | 115 | 7 | 7 | 321 | 5 | 281 | 9.71e-83 | 253 |
| MS.gene066435.t1 | MTR_7g036780 | 61.009 | 218 | 70 | 6 | 5 | 217 | 3 | 210 | 5.05e-77 | 236 |
| MS.gene066435.t1 | MTR_3g061700 | 47.619 | 273 | 68 | 5 | 63 | 331 | 1 | 202 | 4.69e-59 | 189 |
| MS.gene066435.t1 | MTR_3g110048 | 32.381 | 105 | 64 | 1 | 57 | 154 | 47 | 151 | 2.18e-14 | 70.5 |
| MS.gene066435.t1 | MTR_7g094120 | 33.000 | 100 | 60 | 1 | 57 | 149 | 48 | 147 | 4.97e-14 | 69.3 |
| MS.gene066435.t1 | MTR_7g094150 | 37.634 | 93 | 51 | 2 | 59 | 145 | 49 | 140 | 7.26e-14 | 68.9 |
| MS.gene066435.t1 | MTR_4g032400 | 30.216 | 139 | 86 | 4 | 13 | 145 | 14 | 147 | 1.08e-13 | 68.6 |
| MS.gene066435.t1 | MTR_4g033460 | 29.224 | 219 | 127 | 7 | 13 | 208 | 12 | 225 | 1.63e-13 | 69.7 |
| MS.gene066435.t1 | MTR_7g094170 | 37.634 | 93 | 51 | 2 | 59 | 145 | 49 | 140 | 2.08e-13 | 67.4 |
| MS.gene066435.t1 | MTR_7g021400 | 34.783 | 92 | 55 | 1 | 59 | 145 | 49 | 140 | 2.69e-13 | 67.4 |
| MS.gene066435.t1 | MTR_8g468480 | 36.000 | 100 | 57 | 2 | 58 | 151 | 48 | 146 | 4.63e-13 | 66.6 |
| MS.gene066435.t1 | MTR_4g032450 | 29.371 | 143 | 90 | 4 | 13 | 149 | 26 | 163 | 5.11e-13 | 67.0 |
| MS.gene066435.t1 | MTR_1g099870 | 36.559 | 93 | 52 | 2 | 66 | 151 | 1 | 93 | 6.07e-13 | 64.7 |
| MS.gene066435.t1 | MTR_4g032510 | 40.217 | 92 | 53 | 2 | 59 | 149 | 51 | 141 | 7.01e-13 | 65.9 |
| MS.gene066435.t1 | MTR_4g032460 | 32.117 | 137 | 84 | 4 | 11 | 145 | 5 | 134 | 7.77e-13 | 65.9 |
| MS.gene066435.t1 | MTR_5g022730 | 29.412 | 136 | 86 | 3 | 15 | 145 | 9 | 139 | 1.16e-12 | 65.5 |
| MS.gene066435.t1 | MTR_5g022710 | 35.417 | 96 | 56 | 2 | 55 | 145 | 45 | 139 | 1.18e-12 | 65.5 |
| MS.gene066435.t1 | MTR_4g033455 | 30.612 | 147 | 89 | 4 | 15 | 155 | 14 | 153 | 1.26e-12 | 65.5 |
| MS.gene066435.t1 | MTR_8g056060 | 30.000 | 150 | 94 | 3 | 13 | 156 | 8 | 152 | 2.67e-12 | 64.3 |
| MS.gene066435.t1 | MTR_4g032500 | 37.500 | 96 | 59 | 1 | 59 | 154 | 51 | 145 | 6.28e-12 | 63.2 |
| MS.gene066435.t1 | MTR_7g021380 | 33.333 | 96 | 59 | 1 | 55 | 145 | 45 | 140 | 9.98e-12 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066435.t1 | AT3G61415 | 65.819 | 354 | 96 | 9 | 1 | 344 | 6 | 344 | 1.01e-142 | 408 |
| MS.gene066435.t1 | AT3G61415 | 65.819 | 354 | 96 | 9 | 1 | 344 | 6 | 344 | 1.02e-142 | 408 |
| MS.gene066435.t1 | AT2G45950 | 59.551 | 356 | 109 | 5 | 1 | 344 | 6 | 338 | 1.26e-134 | 387 |
| MS.gene066435.t1 | AT2G45950 | 59.551 | 356 | 109 | 5 | 1 | 344 | 6 | 338 | 1.26e-134 | 387 |
| MS.gene066435.t1 | AT2G45950 | 59.551 | 356 | 109 | 5 | 1 | 344 | 6 | 338 | 1.26e-134 | 387 |
| MS.gene066435.t1 | AT2G45950 | 59.551 | 356 | 109 | 5 | 1 | 344 | 6 | 338 | 4.69e-134 | 386 |
| MS.gene066435.t1 | AT2G45950 | 59.551 | 356 | 109 | 5 | 1 | 344 | 6 | 338 | 4.69e-134 | 386 |
| MS.gene066435.t1 | AT3G21850 | 33.103 | 145 | 90 | 4 | 8 | 149 | 1 | 141 | 2.17e-16 | 75.9 |
| MS.gene066435.t1 | AT2G03170 | 37.234 | 94 | 57 | 2 | 57 | 149 | 45 | 137 | 1.26e-13 | 68.2 |
| MS.gene066435.t1 | AT1G75950 | 32.394 | 142 | 80 | 3 | 15 | 145 | 8 | 144 | 1.73e-13 | 67.8 |
| MS.gene066435.t1 | AT4G34210 | 36.170 | 94 | 57 | 1 | 59 | 149 | 47 | 140 | 8.83e-13 | 65.9 |
| MS.gene066435.t1 | AT5G42190 | 31.250 | 112 | 55 | 2 | 55 | 145 | 45 | 155 | 3.26e-12 | 64.7 |
| MS.gene066435.t1 | AT1G20140 | 29.747 | 158 | 93 | 5 | 10 | 155 | 5 | 156 | 3.56e-12 | 64.3 |
| MS.gene066435.t1 | AT2G25700 | 29.814 | 161 | 89 | 6 | 10 | 155 | 5 | 156 | 5.62e-12 | 63.9 |
| MS.gene066435.t1 | AT4G34470 | 35.106 | 94 | 58 | 1 | 59 | 149 | 47 | 140 | 6.77e-12 | 63.2 |
| MS.gene066435.t1 | AT3G21830 | 27.465 | 142 | 91 | 3 | 13 | 149 | 6 | 140 | 1.36e-11 | 62.4 |
Find 58 sgRNAs with CRISPR-Local
Find 264 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTAAGCTCTTTCCTCTTCT+TGG | 0.128563 | 8.1:-72232747 | None:intergenic |
| CAATCTCTTGTTCAACTTGT+TGG | 0.233800 | 8.1:-72232116 | None:intergenic |
| AATATTTCTTGACATATAAA+TGG | 0.241293 | 8.1:-72232150 | None:intergenic |
| ACCAATGGGAATGGCTTTCT+AGG | 0.265707 | 8.1:+72235432 | MS.gene066435:CDS |
| ACAGAAGAATTCTTCTTTGA+AGG | 0.317375 | 8.1:+72234514 | MS.gene066435:CDS |
| TTCCTTCTCTAGGTGGTAAA+TGG | 0.319299 | 8.1:+72234679 | MS.gene066435:intron |
| CCCGCAGATTAAATTCTAAC+TGG | 0.355254 | 8.1:+72235349 | MS.gene066435:CDS |
| AAGACATACTGAACAATTCT+TGG | 0.364803 | 8.1:-72232193 | None:intergenic |
| TGTCAAGAAATATTACAAAA+AGG | 0.366988 | 8.1:+72232159 | MS.gene066435:CDS |
| AGAATTAAGCTCAACATTGC+AGG | 0.377228 | 8.1:-72232231 | None:intergenic |
| TAAAGAGCGTGAGAGGATAA+AGG | 0.430215 | 8.1:+72232766 | MS.gene066435:CDS |
| CCATAGGATCATCGTATGTA+TGG | 0.431920 | 8.1:-72234762 | None:intergenic |
| GAAGTTTGAAGCCACACATA+AGG | 0.447376 | 8.1:-72232081 | None:intergenic |
| CAGCCTTCAGTTAAAGCCAT+TGG | 0.449173 | 8.1:+72232473 | MS.gene066435:CDS |
| TGTCGATTTCATCAAGTACT+AGG | 0.451108 | 8.1:+72232261 | MS.gene066435:CDS |
| TTCCATTAATAAAAGACAAA+AGG | 0.453283 | 8.1:-72233575 | None:intergenic |
| TTTACAACAACCTTCTTATG+TGG | 0.473578 | 8.1:-72234548 | None:intergenic |
| GACACCTCTGTAAGATCATC+AGG | 0.476044 | 8.1:-72232573 | None:intergenic |
| ATCATCAGTTATGTTTCTCA+AGG | 0.487275 | 8.1:-72232693 | None:intergenic |
| AGATGATGATATAGATGATC+CGG | 0.489147 | 8.1:+72234813 | MS.gene066435:CDS |
| GCTCTTGCTCGAATAATTGA+AGG | 0.493143 | 8.1:+72232513 | MS.gene066435:CDS |
| TATAATCCAGGAAGAGAAGC+TGG | 0.494548 | 8.1:+72232667 | MS.gene066435:intron |
| TCAAAGAAGAATTCTTCTGT+TGG | 0.501353 | 8.1:-72234511 | None:intergenic |
| TATTCGAGCAAGAGCACGAC+TGG | 0.501432 | 8.1:-72232505 | None:intergenic |
| AACTTGTTGGATTGATTCAT+CGG | 0.503720 | 8.1:-72232103 | None:intergenic |
| CCAGTTAGAATTTAATCTGC+GGG | 0.510673 | 8.1:-72235349 | None:intergenic |
| CCATACATACGATGATCCTA+TGG | 0.512359 | 8.1:+72234762 | MS.gene066435:CDS |
| TAACTGATGATCCAAGGATA+AGG | 0.514531 | 8.1:+72232705 | MS.gene066435:CDS |
| ATCATCTGTACCACATAAGA+AGG | 0.516095 | 8.1:+72234538 | MS.gene066435:CDS |
| TACTTTGTGATGCAGGGAAG+TGG | 0.521468 | 8.1:+72235317 | MS.gene066435:intron |
| CCCTAGAAAGCCATTCCCAT+TGG | 0.526582 | 8.1:-72235433 | None:intergenic |
| TTTATTAATGGAAATGATGG+AGG | 0.529025 | 8.1:+72233585 | MS.gene066435:CDS |
| CGGTTCAAAAGCCTTATCCT+TGG | 0.529113 | 8.1:-72232716 | None:intergenic |
| CATCGTCTTCCTTTCTTGCG+AGG | 0.529591 | 8.1:-72235400 | None:intergenic |
| TTTCATGTTTCAGAATGTTG+AGG | 0.538493 | 8.1:+72233515 | MS.gene066435:intron |
| AAGAGCTTAAAGAGCGTGAG+AGG | 0.550859 | 8.1:+72232759 | MS.gene066435:CDS |
| CTTATGATGAGAAATTCGTT+AGG | 0.551402 | 8.1:+72232409 | MS.gene066435:CDS |
| TCCTCTTCTTGGCATACAAG+CGG | 0.552561 | 8.1:-72232736 | None:intergenic |
| CAACCAATGGCTTTAACTGA+AGG | 0.566317 | 8.1:-72232476 | None:intergenic |
| GTATGTATGGTGTAAACTTG+AGG | 0.568132 | 8.1:-72234749 | None:intergenic |
| ATTGCAGGACTGACTTGTTG+AGG | 0.581903 | 8.1:-72232216 | None:intergenic |
| AATATATCACGAATCTCCTC+CGG | 0.585815 | 8.1:-72232543 | None:intergenic |
| AGTACTAGGCCGCTCAAACA+AGG | 0.587931 | 8.1:+72232275 | MS.gene066435:CDS |
| CCAATGGGAATGGCTTTCTA+GGG | 0.590112 | 8.1:+72235433 | MS.gene066435:CDS |
| ATTGAAGAACCTTGTTTGAG+CGG | 0.591670 | 8.1:-72232284 | None:intergenic |
| ACCGCTTGTATGCCAAGAAG+AGG | 0.592240 | 8.1:+72232735 | MS.gene066435:CDS |
| AATAATTGAAGGGAGATCAC+CGG | 0.593273 | 8.1:+72232524 | MS.gene066435:CDS |
| TCATCATCGAACTCAACCAT+AGG | 0.600224 | 8.1:-72234778 | None:intergenic |
| TCATCAGTTATGTTTCTCAA+GGG | 0.605396 | 8.1:-72232692 | None:intergenic |
| GAAACATAACTGATGATCCA+AGG | 0.605496 | 8.1:+72232699 | MS.gene066435:CDS |
| CTCTTGCTCGAATAATTGAA+GGG | 0.613445 | 8.1:+72232514 | MS.gene066435:CDS |
| GCCAGTTAGAATTTAATCTG+CGG | 0.626882 | 8.1:-72235350 | None:intergenic |
| TTTGCCTGATGATCTTACAG+AGG | 0.655792 | 8.1:+72232569 | MS.gene066435:CDS |
| TGTAAACTTGAGGTCTCACA+CGG | 0.674315 | 8.1:-72234739 | None:intergenic |
| CATGGCAGTTATTAAACCCG+AGG | 0.683521 | 8.1:+72231158 | None:intergenic |
| AGATGATGAAGCCTTATGTG+TGG | 0.697842 | 8.1:+72232070 | MS.gene066435:intron |
| CGACTGGTGAGATCAACCAA+TGG | 0.697991 | 8.1:-72232489 | None:intergenic |
| AATTGAAGGGAGATCACCGG+AGG | 0.707838 | 8.1:+72232527 | MS.gene066435:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATCCAAAAAAATATAAT+CGG | - | chr8.1:72232623-72232642 | None:intergenic | 10.0% |
| !! | TAAGAAAATTATTTATAAAC+CGG | + | chr8.1:72234187-72234206 | MS.gene066435:intron | 10.0% |
| !! | TTAAACAAAATTTAACAATT+GGG | - | chr8.1:72231243-72231262 | None:intergenic | 10.0% |
| !!! | CAAAACTTTTTTATAATTTA+GGG | - | chr8.1:72233484-72233503 | None:intergenic | 10.0% |
| !!! | TAAGTTTAAAAGTATAAAAA+TGG | - | chr8.1:72231974-72231993 | None:intergenic | 10.0% |
| !!! | TCAAAACTTTTTTATAATTT+AGG | - | chr8.1:72233485-72233504 | None:intergenic | 10.0% |
| !! | AATATTTCTTGACATATAAA+TGG | - | chr8.1:72232153-72232172 | None:intergenic | 15.0% |
| !! | ATAAATAGTTAACTTTAATC+CGG | - | chr8.1:72234209-72234228 | None:intergenic | 15.0% |
| !! | CTTAAACAAAATTTAACAAT+TGG | - | chr8.1:72231244-72231263 | None:intergenic | 15.0% |
| !! | GATATTAAGAAAAGTTTATA+GGG | + | chr8.1:72235241-72235260 | MS.gene066435:intron | 15.0% |
| !! | TGATATTAAGAAAAGTTTAT+AGG | + | chr8.1:72235240-72235259 | MS.gene066435:intron | 15.0% |
| !!! | AAAAATATTTGAGATTCTTT+AGG | + | chr8.1:72234360-72234379 | MS.gene066435:intron | 15.0% |
| !!! | AAAATATTTGAGATTCTTTA+GGG | + | chr8.1:72234361-72234380 | MS.gene066435:intron | 15.0% |
| !!! | AAACTTAATCCTTTTTTTTT+TGG | + | chr8.1:72235091-72235110 | MS.gene066435:intron | 15.0% |
| !!! | AAGAAATTTGTATGATTTTT+GGG | + | chr8.1:72234309-72234328 | MS.gene066435:intron | 15.0% |
| !!! | ACTGGAATAATTTTTATATA+AGG | + | chr8.1:72234032-72234051 | MS.gene066435:intron | 15.0% |
| !!! | CAATTGTTAAATTTTGTTTA+AGG | + | chr8.1:72231242-72231261 | MS.gene066435:intron | 15.0% |
| !!! | GAAATTGAATTTTAGAAATT+AGG | + | chr8.1:72233164-72233183 | MS.gene066435:intron | 15.0% |
| !!! | TAAGAAATTTGTATGATTTT+TGG | + | chr8.1:72234308-72234327 | MS.gene066435:intron | 15.0% |
| !! | AAATCACCTTAATCTATTTA+AGG | + | chr8.1:72231644-72231663 | MS.gene066435:intron | 20.0% |
| !! | AAATGTTTGTCTTATAGAAA+AGG | - | chr8.1:72233938-72233957 | None:intergenic | 20.0% |
| !! | AATGTTTGTCTTATAGAAAA+GGG | - | chr8.1:72233937-72233956 | None:intergenic | 20.0% |
| !! | AGAAAGTAAAATCTAAAAGA+GGG | + | chr8.1:72233187-72233206 | MS.gene066435:intron | 20.0% |
| !! | ATATAAAAATTATTCCAGTC+AGG | - | chr8.1:72234031-72234050 | None:intergenic | 20.0% |
| !! | ATATCTAATGTTTACATAGT+TGG | - | chr8.1:72231794-72231813 | None:intergenic | 20.0% |
| !! | CTTAAACATCCAAAAAAAAA+AGG | - | chr8.1:72235103-72235122 | None:intergenic | 20.0% |
| !! | GATGTACAAATAATTTCAAT+AGG | + | chr8.1:72231370-72231389 | MS.gene066435:intron | 20.0% |
| !! | TAATAAAACTGACACTATAT+TGG | + | chr8.1:72232030-72232049 | MS.gene066435:intron | 20.0% |
| !! | TATAAAAATTATTCCAGTCA+GGG | - | chr8.1:72234030-72234049 | None:intergenic | 20.0% |
| !! | TATTAAAAGCAAAAATTGAC+AGG | + | chr8.1:72234836-72234855 | MS.gene066435:CDS | 20.0% |
| !! | TGTCAAGAAATATTACAAAA+AGG | + | chr8.1:72232159-72232178 | MS.gene066435:CDS | 20.0% |
| !! | TGTTTATAAGTAAAAGACAA+AGG | - | chr8.1:72231298-72231317 | None:intergenic | 20.0% |
| !! | TTCCATTAATAAAAGACAAA+AGG | - | chr8.1:72233578-72233597 | None:intergenic | 20.0% |
| !! | TTGTTTCACGTAATATTTAA+TGG | + | chr8.1:72231339-72231358 | MS.gene066435:intron | 20.0% |
| !!! | AAAATCTGTGATTTTTGAAA+CGG | - | chr8.1:72231484-72231503 | None:intergenic | 20.0% |
| !!! | CTTTTTTTTTTGGATGTTTA+AGG | + | chr8.1:72235101-72235120 | MS.gene066435:intron | 20.0% |
| !!! | TACAGTTAATTTTTTAGTGA+TGG | - | chr8.1:72234648-72234667 | None:intergenic | 20.0% |
| !!! | TCAATTTTTGCTTTTAATAC+CGG | - | chr8.1:72234835-72234854 | None:intergenic | 20.0% |
| !!! | TCTTTTATTAATGGAAATGA+TGG | + | chr8.1:72233582-72233601 | MS.gene066435:CDS | 20.0% |
| !!! | TTTGTTTGTCACTATTTTTT+TGG | + | chr8.1:72234962-72234981 | MS.gene066435:intron | 20.0% |
| ! | AACTTAGATATAAAAAACCC+TGG | + | chr8.1:72233121-72233140 | MS.gene066435:intron | 25.0% |
| ! | AATTTGCCACAACAATTTAT+CGG | - | chr8.1:72234116-72234135 | None:intergenic | 25.0% |
| ! | ACCATACAACAATAAAAAGA+AGG | + | chr8.1:72233052-72233071 | MS.gene066435:intron | 25.0% |
| ! | ATCTAAGTTTCTGATATAGA+AGG | - | chr8.1:72233110-72233129 | None:intergenic | 25.0% |
| ! | ATGTTTGTCTTATAGAAAAG+GGG | - | chr8.1:72233936-72233955 | None:intergenic | 25.0% |
| ! | CAAATGATGTGACAATATAA+GGG | - | chr8.1:72234285-72234304 | None:intergenic | 25.0% |
| ! | CATGTTGAATAGATATTTCA+AGG | + | chr8.1:72235030-72235049 | MS.gene066435:intron | 25.0% |
| ! | CTTATATTGTCACATCATTT+GGG | + | chr8.1:72234284-72234303 | MS.gene066435:intron | 25.0% |
| ! | GAAATATTACAAAAAGGCAA+TGG | + | chr8.1:72232165-72232184 | MS.gene066435:CDS | 25.0% |
| ! | GAGAAAGTAAAATCTAAAAG+AGG | + | chr8.1:72233186-72233205 | MS.gene066435:intron | 25.0% |
| ! | GATCTGTCAATTAAATAACA+CGG | + | chr8.1:72231720-72231739 | MS.gene066435:intron | 25.0% |
| ! | GATGTCATTGTAAAATTAAG+AGG | + | chr8.1:72233812-72233831 | MS.gene066435:intron | 25.0% |
| ! | GTAATATTTAATGGCATCAT+TGG | + | chr8.1:72231348-72231367 | MS.gene066435:intron | 25.0% |
| ! | TTATAAGAATGTGTGAGAAA+TGG | - | chr8.1:72232652-72232671 | None:intergenic | 25.0% |
| ! | TTATACACTGCTAAATCATT+TGG | + | chr8.1:72234585-72234604 | MS.gene066435:intron | 25.0% |
| ! | TTATTACCGATAAATTGTTG+TGG | + | chr8.1:72234107-72234126 | MS.gene066435:intron | 25.0% |
| ! | TTCACAATAAAAATCTTCCA+GGG | - | chr8.1:72233141-72233160 | None:intergenic | 25.0% |
| ! | TTCTATTTAATGTTACTCCT+TGG | + | chr8.1:72233708-72233727 | MS.gene066435:intron | 25.0% |
| ! | TTTATTAATGGAAATGATGG+AGG | + | chr8.1:72233585-72233604 | MS.gene066435:CDS | 25.0% |
| ! | TTTCACAATAAAAATCTTCC+AGG | - | chr8.1:72233142-72233161 | None:intergenic | 25.0% |
| !! | AAAAAGTCTTTTATTCTCTC+TGG | - | chr8.1:72235375-72235394 | None:intergenic | 25.0% |
| !! | AAATAGAAAGTGCACAAATT+AGG | - | chr8.1:72233696-72233715 | None:intergenic | 25.0% |
| !! | ACCTTCTTTTTATTGTTGTA+TGG | - | chr8.1:72233056-72233075 | None:intergenic | 25.0% |
| !! | AGTAATGTTCGTCTTTTAAA+AGG | - | chr8.1:72233745-72233764 | None:intergenic | 25.0% |
| !! | GACCTTTTGTCTTTTATTAA+TGG | + | chr8.1:72233573-72233592 | MS.gene066435:CDS | 25.0% |
| !! | GATACAAGTTTTTATTATCG+TGG | + | chr8.1:72234230-72234249 | MS.gene066435:intron | 25.0% |
| !! | GATTTTCTTTTGTATAGGAA+CGG | + | chr8.1:72232382-72232401 | MS.gene066435:intron | 25.0% |
| !! | TCTGATCTAATTGATGTTTT+CGG | + | chr8.1:72233290-72233309 | MS.gene066435:intron | 25.0% |
| !!! | AAAATCACAGATTTTGAAAC+TGG | + | chr8.1:72231489-72231508 | MS.gene066435:intron | 25.0% |
| !!! | AAATCTGTGATTTTTGAAAC+GGG | - | chr8.1:72231483-72231502 | None:intergenic | 25.0% |
| !!! | ACTTCTCTTTGTTTTACTTT+TGG | + | chr8.1:72232007-72232026 | MS.gene066435:intron | 25.0% |
| !!! | GTAATGTTCGTCTTTTAAAA+GGG | - | chr8.1:72233744-72233763 | None:intergenic | 25.0% |
| !!! | GTATGCCGATTATATTTTTT+TGG | + | chr8.1:72232615-72232634 | MS.gene066435:intron | 25.0% |
| !!! | GTATGGTTTTTTTTGTTGTT+CGG | - | chr8.1:72233039-72233058 | None:intergenic | 25.0% |
| !!! | TACAATGACATCATTTTTAG+CGG | - | chr8.1:72233804-72233823 | None:intergenic | 25.0% |
| !!! | TCTTTTAAAAGGGTTTCTTA+TGG | - | chr8.1:72233734-72233753 | None:intergenic | 25.0% |
| !!! | TTTGTTTAAGGTGTACTTTT+TGG | + | chr8.1:72231254-72231273 | MS.gene066435:intron | 25.0% |
| AAAAGCAAAAATTGACAGGT+GGG | + | chr8.1:72234840-72234859 | MS.gene066435:intron | 30.0% | |
| AAACAGCCATAAATGCATTA+TGG | - | chr8.1:72231412-72231431 | None:intergenic | 30.0% | |
| AAAGAAGGTGAGTGAATATA+AGG | + | chr8.1:72233067-72233086 | MS.gene066435:intron | 30.0% | |
| AAAGAGAAGTCTTCAATGAT+AGG | - | chr8.1:72231997-72232016 | None:intergenic | 30.0% | |
| AAATGACCTGGTAAAAAACA+TGG | - | chr8.1:72235198-72235217 | None:intergenic | 30.0% | |
| AAATTGTTGTGGCAAATTTG+TGG | + | chr8.1:72234118-72234137 | MS.gene066435:intron | 30.0% | |
| AACTAGAGCTTGAAATTTGA+AGG | - | chr8.1:72233346-72233365 | None:intergenic | 30.0% | |
| AAGACATACTGAACAATTCT+TGG | - | chr8.1:72232196-72232215 | None:intergenic | 30.0% | |
| AATTGTTGTGGCAAATTTGT+GGG | + | chr8.1:72234119-72234138 | MS.gene066435:intron | 30.0% | |
| ACAGAAGAATTCTTCTTTGA+AGG | + | chr8.1:72234514-72234533 | MS.gene066435:CDS | 30.0% | |
| ACTAGAGCTTGAAATTTGAA+GGG | - | chr8.1:72233345-72233364 | None:intergenic | 30.0% | |
| ACTTTCTATCTGATGTTATG+AGG | + | chr8.1:72233762-72233781 | MS.gene066435:intron | 30.0% | |
| AGAATAAAAAGAAGAACCGA+AGG | + | chr8.1:72234480-72234499 | MS.gene066435:CDS | 30.0% | |
| AGATGATGATATAGATGATC+CGG | + | chr8.1:72234813-72234832 | MS.gene066435:CDS | 30.0% | |
| ATATCACAGAATATCTCACT+CGG | + | chr8.1:72232358-72232377 | MS.gene066435:intron | 30.0% | |
| ATCATCAGTTATGTTTCTCA+AGG | - | chr8.1:72232696-72232715 | None:intergenic | 30.0% | |
| ATGCATTTATGGCTGTTTAA+TGG | + | chr8.1:72231414-72231433 | MS.gene066435:intron | 30.0% | |
| ATTGGGATTCAATTTGTATG+GGG | - | chr8.1:72231459-72231478 | None:intergenic | 30.0% | |
| ATTTAAGGATGGTGATTCTA+GGG | + | chr8.1:72231659-72231678 | MS.gene066435:intron | 30.0% | |
| ATTTATCGGTAATAACCCTT+CGG | - | chr8.1:72234102-72234121 | None:intergenic | 30.0% | |
| CACCATCCTTAAATAGATTA+AGG | - | chr8.1:72231653-72231672 | None:intergenic | 30.0% | |
| CACCTTAATCTATTTAAGGA+TGG | + | chr8.1:72231648-72231667 | MS.gene066435:intron | 30.0% | |
| CATAAATGCATTATGGTTCA+CGG | - | chr8.1:72231405-72231424 | None:intergenic | 30.0% | |
| CCAAATGATGTGACAATATA+AGG | - | chr8.1:72234286-72234305 | None:intergenic | 30.0% | |
| CCTTATATTGTCACATCATT+TGG | + | chr8.1:72234283-72234302 | MS.gene066435:intron | 30.0% | |
| CTTATGATGAGAAATTCGTT+AGG | + | chr8.1:72232409-72232428 | MS.gene066435:CDS | 30.0% | |
| GATTGGGATTCAATTTGTAT+GGG | - | chr8.1:72231460-72231479 | None:intergenic | 30.0% | |
| TAAAAGCAAAAATTGACAGG+TGG | + | chr8.1:72234839-72234858 | MS.gene066435:intron | 30.0% | |
| TACAGAAAGATATCATACCT+CGG | - | chr8.1:72231178-72231197 | None:intergenic | 30.0% | |
| TAGCTTGACAATGTTCATTT+AGG | + | chr8.1:72232989-72233008 | MS.gene066435:intron | 30.0% | |
| TATTTAAGGATGGTGATTCT+AGG | + | chr8.1:72231658-72231677 | MS.gene066435:intron | 30.0% | |
| TCAAAGAAGAATTCTTCTGT+TGG | - | chr8.1:72234514-72234533 | None:intergenic | 30.0% | |
| TCATCAGTTATGTTTCTCAA+GGG | - | chr8.1:72232695-72232714 | None:intergenic | 30.0% | |
| TGAATGAACATAGAGTCTAT+TGG | + | chr8.1:72234622-72234641 | MS.gene066435:intron | 30.0% | |
| TGATTGTAGACAAATGAGAT+AGG | + | chr8.1:72233264-72233283 | MS.gene066435:intron | 30.0% | |
| TGTGATATTTGTTCAGACTA+GGG | - | chr8.1:72232346-72232365 | None:intergenic | 30.0% | |
| TGTTTGTCTTATAGAAAAGG+GGG | - | chr8.1:72233935-72233954 | None:intergenic | 30.0% | |
| TTTAATTGACAGATCATGCA+TGG | - | chr8.1:72231715-72231734 | None:intergenic | 30.0% | |
| TTTACAACAACCTTCTTATG+TGG | - | chr8.1:72234551-72234570 | None:intergenic | 30.0% | |
| TTTCATGTTTCAGAATGTTG+AGG | + | chr8.1:72233515-72233534 | MS.gene066435:intron | 30.0% | |
| TTTCTCTATGACTGTTGTAA+TGG | + | chr8.1:72231916-72231935 | MS.gene066435:intron | 30.0% | |
| TTTGATTACCTAAAATGACC+TGG | - | chr8.1:72235210-72235229 | None:intergenic | 30.0% | |
| ! | TCATTTAGGACATACTTTGT+TGG | + | chr8.1:72233003-72233022 | MS.gene066435:intron | 30.0% |
| ! | TCGGTGATTTTCTTTTGTAT+AGG | + | chr8.1:72232377-72232396 | MS.gene066435:intron | 30.0% |
| ! | TCGGTTCTTCTTTTTATTCT+TGG | - | chr8.1:72234480-72234499 | None:intergenic | 30.0% |
| ! | TCTCAATTTTATGACAGACT+AGG | + | chr8.1:72233874-72233893 | MS.gene066435:intron | 30.0% |
| ! | TTTTTGTATTCTAGCCAGTT+AGG | + | chr8.1:72234913-72234932 | MS.gene066435:intron | 30.0% |
| !! | AACTTGTTGGATTGATTCAT+CGG | - | chr8.1:72232106-72232125 | None:intergenic | 30.0% |
| !! | CAACATTCTGAAACATGAAA+GGG | - | chr8.1:72233515-72233534 | None:intergenic | 30.0% |
| !! | GTTACTGTGTTTTGCTTTTA+AGG | + | chr8.1:72231605-72231624 | MS.gene066435:intron | 30.0% |
| !! | TCAACATTCTGAAACATGAA+AGG | - | chr8.1:72233516-72233535 | None:intergenic | 30.0% |
| !!! | AATCTGTGATTTTTGAAACG+GGG | - | chr8.1:72231482-72231501 | None:intergenic | 30.0% |
| !!! | ACAATGACATCATTTTTAGC+GGG | - | chr8.1:72233803-72233822 | None:intergenic | 30.0% |
| !!! | GTTTTTTACCAGGTCATTTT+AGG | + | chr8.1:72235199-72235218 | MS.gene066435:intron | 30.0% |
| AAGGACTAAAACATATGCAC+AGG | + | chr8.1:72235049-72235068 | MS.gene066435:intron | 35.0% | |
| AATAATTGAAGGGAGATCAC+CGG | + | chr8.1:72232524-72232543 | MS.gene066435:CDS | 35.0% | |
| AATATATCACGAATCTCCTC+CGG | - | chr8.1:72232546-72232565 | None:intergenic | 35.0% | |
| ACAGAAAGATATCATACCTC+GGG | - | chr8.1:72231177-72231196 | None:intergenic | 35.0% | |
| AGAATTAAGCTCAACATTGC+AGG | - | chr8.1:72232234-72232253 | None:intergenic | 35.0% | |
| AGCACATCATTAACGAACTT+TGG | - | chr8.1:72234258-72234277 | None:intergenic | 35.0% | |
| AGCTGAAACTGTTAACATTG+CGG | + | chr8.1:72233231-72233250 | MS.gene066435:intron | 35.0% | |
| ATCATCTGTACCACATAAGA+AGG | + | chr8.1:72234538-72234557 | MS.gene066435:CDS | 35.0% | |
| ATCTAAAAGAGGGCAACTAA+CGG | + | chr8.1:72233197-72233216 | MS.gene066435:intron | 35.0% | |
| CAATCTCTTGTTCAACTTGT+TGG | - | chr8.1:72232119-72232138 | None:intergenic | 35.0% | |
| CCAGTTAGAATTTAATCTGC+GGG | - | chr8.1:72235352-72235371 | None:intergenic | 35.0% | |
| CGTGAACCATAATGCATTTA+TGG | + | chr8.1:72231403-72231422 | MS.gene066435:intron | 35.0% | |
| CTAGAGCTTGAAATTTGAAG+GGG | - | chr8.1:72233344-72233363 | None:intergenic | 35.0% | |
| CTCACACATTCTTATAATCC+AGG | + | chr8.1:72232655-72232674 | MS.gene066435:intron | 35.0% | |
| CTCTTGCTCGAATAATTGAA+GGG | + | chr8.1:72232514-72232533 | MS.gene066435:CDS | 35.0% | |
| CTGTGATATTTGTTCAGACT+AGG | - | chr8.1:72232347-72232366 | None:intergenic | 35.0% | |
| GAAACATAACTGATGATCCA+AGG | + | chr8.1:72232699-72232718 | MS.gene066435:CDS | 35.0% | |
| GCCAGTTAGAATTTAATCTG+CGG | - | chr8.1:72235353-72235372 | None:intergenic | 35.0% | |
| GGATTGGGATTCAATTTGTA+TGG | - | chr8.1:72231461-72231480 | None:intergenic | 35.0% | |
| GTATGTATGGTGTAAACTTG+AGG | - | chr8.1:72234752-72234771 | None:intergenic | 35.0% | |
| GTCTGTCATAAAATTGAGAC+TGG | - | chr8.1:72233873-72233892 | None:intergenic | 35.0% | |
| GTGAAGATCAATGTTGTCAA+TGG | + | chr8.1:72232889-72232908 | MS.gene066435:intron | 35.0% | |
| TAAAACATATGCACAGGACA+AGG | + | chr8.1:72235055-72235074 | MS.gene066435:intron | 35.0% | |
| TAACTGATGATCCAAGGATA+AGG | + | chr8.1:72232705-72232724 | MS.gene066435:CDS | 35.0% | |
| TAGAGCTTGAAATTTGAAGG+GGG | - | chr8.1:72233343-72233362 | None:intergenic | 35.0% | |
| TCTTCAATGCTCTTATCTTG+TGG | + | chr8.1:72232299-72232318 | MS.gene066435:intron | 35.0% | |
| TGCAATCTGACACAAAACTA+AGG | - | chr8.1:72232939-72232958 | None:intergenic | 35.0% | |
| TTCTATCTGATGTTATGAGG+AGG | + | chr8.1:72233765-72233784 | MS.gene066435:intron | 35.0% | |
| TTGATCTTCACATTTCGCAT+TGG | - | chr8.1:72232880-72232899 | None:intergenic | 35.0% | |
| TTGTCAAGCTATTGTTGTGT+TGG | - | chr8.1:72232980-72232999 | None:intergenic | 35.0% | |
| TTTAAGCTCTTTCCTCTTCT+TGG | - | chr8.1:72232750-72232769 | None:intergenic | 35.0% | |
| ! | AATTTTGTCACAGATCCGAA+GGG | + | chr8.1:72234443-72234462 | MS.gene066435:intron | 35.0% |
| ! | ATTGAAGAACCTTGTTTGAG+CGG | - | chr8.1:72232287-72232306 | None:intergenic | 35.0% |
| ! | CTTTTTACAACCAATGGGAA+TGG | + | chr8.1:72235423-72235442 | MS.gene066435:CDS | 35.0% |
| ! | TAATTGATGTTTTCGGCAAC+AGG | + | chr8.1:72233297-72233316 | MS.gene066435:intron | 35.0% |
| ! | TTCTTTTGTATAGGAACGGA+AGG | + | chr8.1:72232386-72232405 | MS.gene066435:intron | 35.0% |
| !! | ACGATGCTTTTTACAACCAA+TGG | + | chr8.1:72235417-72235436 | MS.gene066435:CDS | 35.0% |
| !! | ATTGTTGTGTTGGTTCAACA+TGG | - | chr8.1:72232970-72232989 | None:intergenic | 35.0% |
| !! | CGATGCTTTTTACAACCAAT+GGG | + | chr8.1:72235418-72235437 | MS.gene066435:CDS | 35.0% |
| !! | GTTTAAGGTGTACTTTTTGG+TGG | + | chr8.1:72231257-72231276 | MS.gene066435:intron | 35.0% |
| !! | TGTCGATTTCATCAAGTACT+AGG | + | chr8.1:72232261-72232280 | MS.gene066435:CDS | 35.0% |
| !! | TTGGAAGTTTTAATCCCCTT+CGG | - | chr8.1:72234461-72234480 | None:intergenic | 35.0% |
| !!! | TACCTTCCATGTTTTTTACC+AGG | + | chr8.1:72235189-72235208 | MS.gene066435:intron | 35.0% |
| !!! | TAGTTTTGTGTCAGATTGCA+TGG | + | chr8.1:72232939-72232958 | MS.gene066435:intron | 35.0% |
| !!! | TCTGTTGGTCTTTTTTCCTT+CGG | - | chr8.1:72234499-72234518 | None:intergenic | 35.0% |
| !!! | TGATTTTTGAAACGGGGATT+GGG | - | chr8.1:72231476-72231495 | None:intergenic | 35.0% |
| AAAAGGGTTTCTTATGGCCA+AGG | - | chr8.1:72233728-72233747 | None:intergenic | 40.0% | |
| AAAATTCTTCACCTCCAGTC+AGG | - | chr8.1:72234429-72234448 | None:intergenic | 40.0% | |
| AGTCAGGGATCGTAAAGTTA+GGG | - | chr8.1:72234015-72234034 | None:intergenic | 40.0% | |
| AGTGATTTGATTGAGCCCTA+AGG | - | chr8.1:72231831-72231850 | None:intergenic | 40.0% | |
| ATCTAGACCTATGTTGTCGA+TGG | - | chr8.1:72233438-72233457 | None:intergenic | 40.0% | |
| ATGCATTATGGTTCACGGAA+TGG | - | chr8.1:72231400-72231419 | None:intergenic | 40.0% | |
| CCATACATACGATGATCCTA+TGG | + | chr8.1:72234762-72234781 | MS.gene066435:CDS | 40.0% | |
| CCATAGGATCATCGTATGTA+TGG | - | chr8.1:72234765-72234784 | None:intergenic | 40.0% | |
| CCCGCAGATTAAATTCTAAC+TGG | + | chr8.1:72235349-72235368 | MS.gene066435:CDS | 40.0% | |
| CTTACATCTTGAACGAACTC+TGG | + | chr8.1:72234060-72234079 | MS.gene066435:intron | 40.0% | |
| GAACGAACTCTGGATTATCA+GGG | + | chr8.1:72234070-72234089 | MS.gene066435:intron | 40.0% | |
| GACCTGGTAAAAAACATGGA+AGG | - | chr8.1:72235194-72235213 | None:intergenic | 40.0% | |
| GCTCTTGCTCGAATAATTGA+AGG | + | chr8.1:72232513-72232532 | MS.gene066435:CDS | 40.0% | |
| GCTGAAACTGTTAACATTGC+GGG | + | chr8.1:72233232-72233251 | MS.gene066435:intron | 40.0% | |
| GGTGCATCTTTGAATAGGAA+CGG | - | chr8.1:72233410-72233429 | None:intergenic | 40.0% | |
| TATAATCCAGGAAGAGAAGC+TGG | + | chr8.1:72232667-72232686 | MS.gene066435:intron | 40.0% | |
| TCATCATCGAACTCAACCAT+AGG | - | chr8.1:72234781-72234800 | None:intergenic | 40.0% | |
| TCCTATTCAAAGATGCACCA+CGG | + | chr8.1:72233411-72233430 | MS.gene066435:intron | 40.0% | |
| TGAAATTTGAAGGGGGAATC+AGG | - | chr8.1:72233336-72233355 | None:intergenic | 40.0% | |
| TGAACGAACTCTGGATTATC+AGG | + | chr8.1:72234069-72234088 | MS.gene066435:intron | 40.0% | |
| TGTAAACTTGAGGTCTCACA+CGG | - | chr8.1:72234742-72234761 | None:intergenic | 40.0% | |
| TTCCTTCTCTAGGTGGTAAA+TGG | + | chr8.1:72234679-72234698 | MS.gene066435:intron | 40.0% | |
| TTTGCCTGATGATCTTACAG+AGG | + | chr8.1:72232569-72232588 | MS.gene066435:CDS | 40.0% | |
| ! | AGATGATGAAGCCTTATGTG+TGG | + | chr8.1:72232070-72232089 | MS.gene066435:intron | 40.0% |
| ! | ATTTTGTCACAGATCCGAAG+GGG | + | chr8.1:72234444-72234463 | MS.gene066435:intron | 40.0% |
| ! | GAAGTTTGAAGCCACACATA+AGG | - | chr8.1:72232084-72232103 | None:intergenic | 40.0% |
| ! | GAATTTTGTCACAGATCCGA+AGG | + | chr8.1:72234442-72234461 | MS.gene066435:intron | 40.0% |
| ! | TAAAGAGCGTGAGAGGATAA+AGG | + | chr8.1:72232766-72232785 | MS.gene066435:CDS | 40.0% |
| ! | TTTTGTCATCCTCGCAAGAA+AGG | + | chr8.1:72235391-72235410 | MS.gene066435:CDS | 40.0% |
| !! | CAACCAATGGCTTTAACTGA+AGG | - | chr8.1:72232479-72232498 | None:intergenic | 40.0% |
| !! | GTCTGTTACTTTGTGATGCA+GGG | + | chr8.1:72235311-72235330 | MS.gene066435:intron | 40.0% |
| !! | TGAAGCACTGCATCAGAAAA+TGG | - | chr8.1:72234867-72234886 | None:intergenic | 40.0% |
| !! | TGTCTGTTACTTTGTGATGC+AGG | + | chr8.1:72235310-72235329 | MS.gene066435:intron | 40.0% |
| !!! | ATGACATCATTTTTAGCGGG+CGG | - | chr8.1:72233800-72233819 | None:intergenic | 40.0% |
| !!! | GTGATTTTTGAAACGGGGAT+TGG | - | chr8.1:72231477-72231496 | None:intergenic | 40.0% |
| !!! | TTCCTTTTTGACTTCCTGAC+TGG | + | chr8.1:72234412-72234431 | MS.gene066435:intron | 40.0% |
| AAAAGAGGGCAACTAACGGT+AGG | + | chr8.1:72233201-72233220 | MS.gene066435:intron | 45.0% | |
| ACAGACGACAACTACCTAAC+TGG | - | chr8.1:72234930-72234949 | None:intergenic | 45.0% | |
| ACCAATGGGAATGGCTTTCT+AGG | + | chr8.1:72235432-72235451 | MS.gene066435:CDS | 45.0% | |
| ACCACCTAGAGAAGGAAGAA+AGG | - | chr8.1:72234676-72234695 | None:intergenic | 45.0% | |
| ACCTAGAGAAGGAAGAAAGG+CGG | - | chr8.1:72234673-72234692 | None:intergenic | 45.0% | |
| AGAGACTACCAAGCAAACTC+AGG | - | chr8.1:72231875-72231894 | None:intergenic | 45.0% | |
| ATGCAAAGCCATCTTGCCTT+AGG | + | chr8.1:72231812-72231831 | MS.gene066435:intron | 45.0% | |
| ATTATCAGGGCCATTACCGA+AGG | + | chr8.1:72234083-72234102 | MS.gene066435:intron | 45.0% | |
| CAGCCTTCAGTTAAAGCCAT+TGG | + | chr8.1:72232473-72232492 | MS.gene066435:CDS | 45.0% | |
| CAGTCAGGGATCGTAAAGTT+AGG | - | chr8.1:72234016-72234035 | None:intergenic | 45.0% | |
| CCAATGGGAATGGCTTTCTA+GGG | + | chr8.1:72235433-72235452 | MS.gene066435:CDS | 45.0% | |
| CGGTAATAACCCTTCGGTAA+TGG | - | chr8.1:72234096-72234115 | None:intergenic | 45.0% | |
| CTAACTTTACGATCCCTGAC+TGG | + | chr8.1:72234014-72234033 | MS.gene066435:intron | 45.0% | |
| CTCCAGTCAGGAAGTCAAAA+AGG | - | chr8.1:72234417-72234436 | None:intergenic | 45.0% | |
| GACACCTCTGTAAGATCATC+AGG | - | chr8.1:72232576-72232595 | None:intergenic | 45.0% | |
| GACCATTTACCACCTAGAGA+AGG | - | chr8.1:72234684-72234703 | None:intergenic | 45.0% | |
| GAGACTACCAAGCAAACTCA+GGG | - | chr8.1:72231874-72231893 | None:intergenic | 45.0% | |
| TACTTTGTGATGCAGGGAAG+TGG | + | chr8.1:72235317-72235336 | MS.gene066435:intron | 45.0% | |
| TCCGTGGTGCATCTTTGAAT+AGG | - | chr8.1:72233415-72233434 | None:intergenic | 45.0% | |
| TCCTCTTCTTGGCATACAAG+CGG | - | chr8.1:72232739-72232758 | None:intergenic | 45.0% | |
| TGCAAAGCCATCTTGCCTTA+GGG | + | chr8.1:72231813-72231832 | MS.gene066435:intron | 45.0% | |
| TTATCAGGGCCATTACCGAA+GGG | + | chr8.1:72234084-72234103 | MS.gene066435:intron | 45.0% | |
| ! | AAGAGCTTAAAGAGCGTGAG+AGG | + | chr8.1:72232759-72232778 | MS.gene066435:CDS | 45.0% |
| ! | CGGTTCAAAAGCCTTATCCT+TGG | - | chr8.1:72232719-72232738 | None:intergenic | 45.0% |
| ! | TAAGGATGGTGATTCTAGGG+AGG | + | chr8.1:72231662-72231681 | MS.gene066435:intron | 45.0% |
| ! | TTCGAATCCCTGAGTTTGCT+TGG | + | chr8.1:72231864-72231883 | MS.gene066435:intron | 45.0% |
| !! | ATTGCAGGACTGACTTGTTG+AGG | - | chr8.1:72232219-72232238 | None:intergenic | 45.0% |
| !! | GATGATCTTACAGAGGTGTC+TGG | + | chr8.1:72232576-72232595 | MS.gene066435:intron | 45.0% |
| !!! | CTTTTTGACTTCCTGACTGG+AGG | + | chr8.1:72234415-72234434 | MS.gene066435:intron | 45.0% |
| AACTAAGGACGTTGCCACGT+TGG | - | chr8.1:72232924-72232943 | None:intergenic | 50.0% | |
| AATGGTGTATCGCACCAACG+TGG | + | chr8.1:72232907-72232926 | MS.gene066435:intron | 50.0% | |
| AATTGAAGGGAGATCACCGG+AGG | + | chr8.1:72232527-72232546 | MS.gene066435:CDS | 50.0% | |
| ACCGCCTTTCTTCCTTCTCT+AGG | + | chr8.1:72234669-72234688 | MS.gene066435:intron | 50.0% | |
| ACCGCTTGTATGCCAAGAAG+AGG | + | chr8.1:72232735-72232754 | MS.gene066435:CDS | 50.0% | |
| AGTACTAGGCCGCTCAAACA+AGG | + | chr8.1:72232275-72232294 | MS.gene066435:CDS | 50.0% | |
| CAGACTAGGCAAAATAGCGC+TGG | + | chr8.1:72233888-72233907 | MS.gene066435:intron | 50.0% | |
| CATCGTCTTCCTTTCTTGCG+AGG | - | chr8.1:72235403-72235422 | None:intergenic | 50.0% | |
| CCCTAGAAAGCCATTCCCAT+TGG | - | chr8.1:72235436-72235455 | None:intergenic | 50.0% | |
| CGACTGGTGAGATCAACCAA+TGG | - | chr8.1:72232492-72232511 | None:intergenic | 50.0% | |
| GATTGAGCCCTAAGGCAAGA+TGG | - | chr8.1:72231823-72231842 | None:intergenic | 50.0% | |
| GCCTTTCTTCCTTCTCTAGG+TGG | + | chr8.1:72234672-72234691 | MS.gene066435:intron | 50.0% | |
| GGCAACTAACGGTAGGTTCA+TGG | + | chr8.1:72233208-72233227 | MS.gene066435:intron | 50.0% | |
| GGTTGTGCACTTGTCTTGTC+TGG | + | chr8.1:72231937-72231956 | MS.gene066435:intron | 50.0% | |
| ! | TATTCGAGCAAGAGCACGAC+TGG | - | chr8.1:72232508-72232527 | None:intergenic | 50.0% |
| !! | TAGGCAAAATAGCGCTGGCA+AGG | + | chr8.1:72233893-72233912 | MS.gene066435:intron | 50.0% |
| CCACGGACCATCGACAACAT+AGG | + | chr8.1:72233428-72233447 | MS.gene066435:intron | 55.0% | |
| CCTATGTTGTCGATGGTCCG+TGG | - | chr8.1:72233431-72233450 | None:intergenic | 55.0% | |
| ! | ACATGCTGCTGACTACGCAG+AGG | - | chr8.1:72235015-72235034 | None:intergenic | 55.0% |
| AGGGCTCCAGCTTCTCTTCC+TGG | - | chr8.1:72232676-72232695 | None:intergenic | 60.0% | |
| CGTGTGTGCACACGCGAGAA+GGG | - | chr8.1:72231761-72231780 | None:intergenic | 60.0% | |
| TCGTGTGTGCACACGCGAGA+AGG | - | chr8.1:72231762-72231781 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 72231159 | 72235465 | 72231159 | ID=MS.gene066435 |
| chr8.1 | mRNA | 72231159 | 72235465 | 72231159 | ID=MS.gene066435.t1;Parent=MS.gene066435 |
| chr8.1 | exon | 72231159 | 72231179 | 72231159 | ID=MS.gene066435.t1.exon1;Parent=MS.gene066435.t1 |
| chr8.1 | CDS | 72231159 | 72231179 | 72231159 | ID=cds.MS.gene066435.t1;Parent=MS.gene066435.t1 |
| chr8.1 | exon | 72232072 | 72232296 | 72232072 | ID=MS.gene066435.t1.exon2;Parent=MS.gene066435.t1 |
| chr8.1 | CDS | 72232072 | 72232296 | 72232072 | ID=cds.MS.gene066435.t1;Parent=MS.gene066435.t1 |
| chr8.1 | exon | 72232399 | 72232590 | 72232399 | ID=MS.gene066435.t1.exon3;Parent=MS.gene066435.t1 |
| chr8.1 | CDS | 72232399 | 72232590 | 72232399 | ID=cds.MS.gene066435.t1;Parent=MS.gene066435.t1 |
| chr8.1 | exon | 72232677 | 72232787 | 72232677 | ID=MS.gene066435.t1.exon4;Parent=MS.gene066435.t1 |
| chr8.1 | CDS | 72232677 | 72232787 | 72232677 | ID=cds.MS.gene066435.t1;Parent=MS.gene066435.t1 |
| chr8.1 | exon | 72233528 | 72233606 | 72233528 | ID=MS.gene066435.t1.exon5;Parent=MS.gene066435.t1 |
| chr8.1 | CDS | 72233528 | 72233606 | 72233528 | ID=cds.MS.gene066435.t1;Parent=MS.gene066435.t1 |
| chr8.1 | exon | 72234456 | 72234559 | 72234456 | ID=MS.gene066435.t1.exon6;Parent=MS.gene066435.t1 |
| chr8.1 | CDS | 72234456 | 72234559 | 72234456 | ID=cds.MS.gene066435.t1;Parent=MS.gene066435.t1 |
| chr8.1 | exon | 72234691 | 72234857 | 72234691 | ID=MS.gene066435.t1.exon7;Parent=MS.gene066435.t1 |
| chr8.1 | CDS | 72234691 | 72234857 | 72234691 | ID=cds.MS.gene066435.t1;Parent=MS.gene066435.t1 |
| chr8.1 | exon | 72235332 | 72235465 | 72235332 | ID=MS.gene066435.t1.exon8;Parent=MS.gene066435.t1 |
| chr8.1 | CDS | 72235332 | 72235465 | 72235332 | ID=cds.MS.gene066435.t1;Parent=MS.gene066435.t1 |
| Gene Sequence |
| Protein sequence |
