AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene066670

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene066670.t1 MTR_4g021690 68.466 815 163 7 82 803 205 1018 0.0 1061
MS.gene066670.t1 MTR_4g021690 91.346 104 9 0 1 104 27 130 2.10e-38 154
MS.gene066670.t1 MTR_4g022540 70.393 814 150 8 82 805 205 1017 0.0 1059
MS.gene066670.t1 MTR_4g022540 91.743 109 9 0 1 109 27 135 6.00e-44 172
MS.gene066670.t1 MTR_4g022460 70.352 823 144 11 82 807 205 1024 0.0 1049
MS.gene066670.t1 MTR_4g022460 96.226 106 4 0 1 106 27 132 1.92e-43 170
MS.gene066670.t1 MTR_4g022480 68.788 817 161 7 82 805 205 1020 0.0 1046
MS.gene066670.t1 MTR_4g022480 95.283 106 5 0 1 106 27 132 1.02e-42 168
MS.gene066670.t1 MTR_4g022560 67.734 812 165 9 82 797 205 1015 0.0 1000
MS.gene066670.t1 MTR_4g022560 88.571 105 12 0 1 105 27 131 5.42e-41 162
MS.gene066670.t1 MTR_4g022960 67.677 792 152 9 82 802 205 963 0.0 965
MS.gene066670.t1 MTR_4g022960 92.381 105 8 0 1 105 27 131 2.09e-42 167
MS.gene066670.t1 MTR_4g022950 68.943 454 105 3 361 812 1 420 0.0 577
MS.gene066670.t1 MTR_8g043600 48.241 398 82 5 106 413 193 556 7.36e-98 315
MS.gene066670.t1 MTR_8g043600 58.824 102 27 2 5 105 13 100 1.38e-23 106
MS.gene066670.t1 MTR_3g015560 35.940 601 253 16 107 593 231 813 6.70e-90 302
MS.gene066670.t1 MTR_3g015560 47.525 101 51 1 1 101 26 124 4.42e-14 77.0
MS.gene066670.t1 MTR_3g015550 34.647 609 264 17 107 598 231 822 1.83e-89 301
MS.gene066670.t1 MTR_3g015550 46.535 101 52 1 1 101 26 124 3.35e-13 73.9
MS.gene066670.t1 MTR_3g015280 36.637 565 245 17 107 576 231 777 2.12e-89 300
MS.gene066670.t1 MTR_3g015280 44.554 101 54 1 1 101 26 124 3.54e-11 67.4
MS.gene066670.t1 MTR_3g015550 34.647 609 264 17 107 598 268 859 2.91e-89 301
MS.gene066670.t1 MTR_3g015550 46.535 101 52 1 1 101 63 161 3.70e-13 73.9
MS.gene066670.t1 MTR_4g050790 35.951 573 248 17 107 576 231 787 7.52e-89 298
MS.gene066670.t1 MTR_4g050790 44.554 101 54 1 1 101 26 124 6.52e-19 92.4
MS.gene066670.t1 MTR_3g015500 35.752 565 240 17 107 576 269 805 2.43e-83 285
MS.gene066670.t1 MTR_3g015500 44.554 101 54 1 1 101 64 162 5.23e-19 92.8
MS.gene066670.t1 MTR_2g078070 30.870 839 427 26 107 805 242 1067 2.50e-81 283
MS.gene066670.t1 MTR_8g038590 29.108 852 414 29 119 802 266 1095 2.54e-70 252
MS.gene066670.t1 MTR_5g028290 32.586 669 369 21 215 810 420 1079 1.13e-69 249
MS.gene066670.t1 MTR_5g028340 31.020 735 395 24 161 810 333 1040 1.67e-69 249
MS.gene066670.t1 MTR_8g038570 28.851 818 421 27 119 808 269 1053 1.09e-67 244
MS.gene066670.t1 MTR_5g028750 30.999 671 377 17 215 810 375 1034 2.10e-67 243
MS.gene066670.t1 MTR_5g071800 29.375 800 426 28 107 805 230 991 2.26e-66 239
MS.gene066670.t1 MTR_5g028420 30.705 723 390 17 174 799 328 1036 8.40e-66 238
MS.gene066670.t1 MTR_7g071940 27.170 795 423 26 107 781 225 983 1.67e-62 228
MS.gene066670.t1 MTR_5g035480 28.190 823 437 30 82 805 213 980 2.22e-61 224
MS.gene066670.t1 MTR_5g070490 28.057 777 417 27 107 781 225 961 7.00e-61 224
MS.gene066670.t1 MTR_0230s0010 30.000 710 412 26 120 781 245 917 9.77e-61 223
MS.gene066670.t1 MTR_5g028610 31.797 651 364 21 215 804 399 1030 2.30e-60 222
MS.gene066670.t1 MTR_2g014840 28.837 860 423 29 117 802 257 1101 3.07e-60 222
MS.gene066670.t1 MTR_4g055630 27.582 823 442 28 107 805 230 1022 3.09e-60 221
MS.gene066670.t1 MTR_5g035530 27.967 851 435 29 107 810 117 936 4.75e-60 221
MS.gene066670.t1 MTR_5g028070 28.473 727 420 18 174 809 478 1195 1.28e-58 217
MS.gene066670.t1 MTR_5g072340 28.774 775 414 27 107 781 230 966 2.11e-58 216
MS.gene066670.t1 MTR_5g071470 27.835 776 418 26 107 781 230 964 2.29e-58 216
MS.gene066670.t1 MTR_5g070960 28.411 799 418 27 107 781 225 993 3.46e-58 215
MS.gene066670.t1 MTR_5g071670 26.795 780 424 25 107 781 220 957 5.16e-58 216
MS.gene066670.t1 MTR_5g040770 27.861 804 438 26 117 805 18 794 5.20e-58 213
MS.gene066670.t1 MTR_6g052760 28.031 767 414 24 120 782 245 977 6.37e-58 215
MS.gene066670.t1 MTR_3g026660 27.189 868 436 28 111 802 242 1089 4.09e-57 213
MS.gene066670.t1 MTR_3g022790 25.834 809 447 28 105 802 233 999 7.44e-57 212
MS.gene066670.t1 MTR_3g018980 27.757 807 407 29 133 798 274 1045 1.22e-56 211
MS.gene066670.t1 MTR_5g071310 28.281 739 413 26 117 781 236 931 1.48e-56 211
MS.gene066670.t1 MTR_1g022380 27.582 794 432 28 106 782 219 986 2.52e-56 209
MS.gene066670.t1 MTR_3g022600 27.406 821 434 29 102 802 243 1021 3.10e-56 210
MS.gene066670.t1 MTR_6g052455 27.646 803 439 25 85 782 101 866 3.30e-56 209
MS.gene066670.t1 MTR_3g018980 29.841 630 314 20 133 666 274 871 6.45e-56 208
MS.gene066670.t1 MTR_6g016420 27.413 777 414 25 107 778 225 956 3.49e-55 206
MS.gene066670.t1 MTR_3g018930 27.649 821 444 28 100 802 243 1031 3.72e-55 207
MS.gene066670.t1 MTR_5g070470 27.904 792 417 27 113 805 236 972 5.42e-55 206
MS.gene066670.t1 MTR_5g037450 27.294 839 439 29 107 802 242 1052 5.93e-55 206
MS.gene066670.t1 MTR_3g027420 27.030 825 441 26 105 802 226 1016 1.14e-54 205
MS.gene066670.t1 MTR_6g046620 27.605 739 410 24 118 778 219 910 1.40e-54 204
MS.gene066670.t1 MTR_5g071220 28.020 803 415 31 107 781 225 992 1.84e-54 204
MS.gene066670.t1 MTR_5g071220 28.020 803 415 31 107 781 225 992 2.23e-54 204
MS.gene066670.t1 MTR_6g016420 27.620 811 440 26 107 805 225 1000 2.64e-54 204
MS.gene066670.t1 MTR_6g046130 27.904 792 432 27 107 799 227 978 6.36e-54 203
MS.gene066670.t1 MTR_5g072140 27.357 753 415 27 109 773 232 940 8.46e-54 201
MS.gene066670.t1 MTR_6g016430 26.173 810 469 22 107 805 233 1024 3.19e-53 200
MS.gene066670.t1 MTR_3g032370 26.957 805 419 26 107 785 240 1001 1.11e-52 199
MS.gene066670.t1 MTR_3g032150 28.503 628 332 17 107 630 240 854 1.21e-52 199
MS.gene066670.t1 MTR_3g023320 26.434 802 428 26 105 788 225 982 1.47e-52 199
MS.gene066670.t1 MTR_3g014040 28.471 569 277 16 107 574 246 785 2.00e-52 198
MS.gene066670.t1 MTR_3g027250 25.509 835 460 25 102 798 228 1038 2.30e-52 198
MS.gene066670.t1 MTR_0425s0020 26.225 816 441 28 102 802 243 1012 8.59e-52 196
MS.gene066670.t1 MTR_3g026660 27.506 818 440 30 111 802 242 1032 1.29e-51 196
MS.gene066670.t1 MTR_0144s0060 27.736 804 431 25 107 804 227 986 1.64e-51 196
MS.gene066670.t1 MTR_0144s0060 41.176 153 80 5 365 515 999 1143 7.72e-18 89.4
MS.gene066670.t1 MTR_3g435740 25.818 856 466 24 87 807 274 1095 1.67e-51 196
MS.gene066670.t1 MTR_3g018930 29.433 547 286 14 100 557 243 778 5.31e-51 192
MS.gene066670.t1 MTR_0256s0050 26.385 758 443 23 107 784 226 948 8.73e-51 193
MS.gene066670.t1 MTR_1g037610 26.766 807 447 27 105 800 240 1013 9.44e-51 194
MS.gene066670.t1 MTR_5g095910 27.557 831 440 30 106 804 246 1046 9.74e-51 193
MS.gene066670.t1 MTR_5g072250 28.837 645 335 20 107 655 230 846 9.96e-51 192
MS.gene066670.t1 MTR_3g032500 26.092 824 442 24 120 807 264 1056 1.09e-50 193
MS.gene066670.t1 MTR_0133s0020 26.295 772 423 19 120 782 244 978 1.98e-50 192
MS.gene066670.t1 MTR_3g435720 28.852 610 322 15 120 630 260 856 2.00e-50 192
MS.gene066670.t1 MTR_8g106550 29.443 557 324 15 120 630 237 770 2.61e-50 192
MS.gene066670.t1 MTR_3g035480 26.982 782 416 27 120 785 260 1002 3.05e-50 192
MS.gene066670.t1 MTR_5g071570 28.143 700 343 25 107 668 226 903 3.45e-50 191
MS.gene066670.t1 MTR_5g071823 27.485 815 441 31 101 805 218 992 4.75e-50 191
MS.gene066670.t1 MTR_5g071850 27.485 815 441 31 101 805 218 992 4.75e-50 191
MS.gene066670.t1 MTR_3g032800 28.385 613 321 17 120 630 260 856 6.13e-50 191
MS.gene066670.t1 MTR_3g022230 26.369 785 426 23 133 802 274 1021 7.59e-50 191
MS.gene066670.t1 MTR_6g084550 28.696 575 313 19 82 573 215 775 8.18e-50 189
MS.gene066670.t1 MTR_3g030980 27.389 628 339 16 107 630 242 856 1.44e-49 190
MS.gene066670.t1 MTR_6g046930 27.995 768 406 27 120 778 243 972 1.60e-49 189
MS.gene066670.t1 MTR_1g047800 25.556 810 464 25 119 804 248 1042 1.88e-49 189
MS.gene066670.t1 MTR_6g047450 26.043 887 435 32 107 805 227 1080 1.95e-49 189
MS.gene066670.t1 MTR_3g032200 27.273 627 340 16 107 630 246 859 2.32e-49 189
MS.gene066670.t1 MTR_5g071780 26.408 799 429 26 107 781 225 988 2.58e-49 188
MS.gene066670.t1 MTR_3g034380 25.698 860 456 30 107 796 242 1088 4.47e-49 188
MS.gene066670.t1 MTR_6g046480 26.053 760 407 25 124 778 250 959 5.31e-49 187
MS.gene066670.t1 MTR_3g031940 27.592 627 338 16 107 630 246 859 5.46e-49 188
MS.gene066670.t1 MTR_5g037460 27.038 736 375 25 117 781 133 777 5.85e-49 186
MS.gene066670.t1 MTR_0133s0030 25.478 785 443 25 120 799 246 993 8.45e-49 187
MS.gene066670.t1 MTR_5g037500 29.285 741 436 28 107 802 238 935 1.05e-48 186
MS.gene066670.t1 MTR_3g030960 27.981 629 334 17 107 630 242 856 1.24e-48 187
MS.gene066670.t1 MTR_5g034770 29.331 583 288 19 107 598 223 772 1.76e-48 186
MS.gene066670.t1 MTR_3g015260 26.966 801 436 31 105 789 242 1009 1.77e-48 186
MS.gene066670.t1 MTR_3g035940 26.624 785 421 27 117 785 257 1002 2.19e-48 186
MS.gene066670.t1 MTR_3g019040 27.294 850 452 35 82 802 215 1027 2.33e-48 186
MS.gene066670.t1 MTR_0002s0110 26.624 785 421 27 117 785 257 1002 2.51e-48 186
MS.gene066670.t1 MTR_4g019360 28.525 610 355 19 107 654 204 794 3.16e-48 186
MS.gene066670.t1 MTR_3g014360 29.114 553 294 17 105 574 240 777 3.57e-48 185
MS.gene066670.t1 MTR_3g070590 26.555 836 425 24 118 800 242 1041 4.28e-48 185
MS.gene066670.t1 MTR_3g023030 28.636 667 343 24 105 666 244 882 5.27e-48 185
MS.gene066670.t1 MTR_3g033110 27.372 643 332 16 87 630 229 835 5.53e-48 185
MS.gene066670.t1 MTR_2g014720 29.044 544 274 15 104 562 147 663 6.33e-48 184
MS.gene066670.t1 MTR_3g021100 27.284 799 437 24 133 798 262 1049 7.67e-48 184
MS.gene066670.t1 MTR_3g015260 28.271 665 340 24 105 666 242 872 9.39e-48 184
MS.gene066670.t1 MTR_3g022870 26.968 686 369 17 85 666 209 866 1.09e-47 184
MS.gene066670.t1 MTR_3g014080 27.128 564 280 13 120 574 259 800 1.55e-47 183
MS.gene066670.t1 MTR_3g014080 27.128 564 280 13 120 574 259 800 1.58e-47 183
MS.gene066670.t1 MTR_3g020890 29.866 596 302 20 134 630 264 842 2.04e-47 183
MS.gene066670.t1 MTR_3g032760 25.621 886 451 29 82 807 213 1050 2.40e-47 183
MS.gene066670.t1 MTR_3g034460 27.258 609 332 18 120 630 244 839 2.53e-47 182
MS.gene066670.t1 MTR_0002s0090 26.136 792 415 30 117 785 257 1001 2.55e-47 182
MS.gene066670.t1 MTR_3g035500 26.136 792 415 30 117 785 257 1001 2.55e-47 182
MS.gene066670.t1 MTR_8g446950 27.002 637 342 20 116 652 281 894 2.98e-47 182
MS.gene066670.t1 MTR_3g032960 25.850 824 444 24 120 807 260 1052 3.96e-47 182
MS.gene066670.t1 MTR_0511s0020 26.823 768 402 26 120 782 245 957 4.35e-47 182
MS.gene066670.t1 MTR_7g021000 25.895 838 436 28 96 802 221 1004 5.57e-47 181
MS.gene066670.t1 MTR_3g022300 25.851 793 434 28 120 802 261 1009 6.44e-47 181
MS.gene066670.t1 MTR_3g022920 27.216 643 358 15 119 666 232 859 6.57e-47 181
MS.gene066670.t1 MTR_3g033380 27.758 562 298 14 107 573 246 794 8.22e-47 181
MS.gene066670.t1 MTR_3g021340 26.601 812 437 27 123 798 247 1035 8.83e-47 181
MS.gene066670.t1 MTR_3g014320 25.739 812 437 26 105 800 240 1001 8.95e-47 181
MS.gene066670.t1 MTR_7g078790 27.048 647 351 21 120 666 248 873 9.57e-47 180
MS.gene066670.t1 MTR_3g035960 25.826 817 421 31 117 798 257 1023 1.66e-46 180
MS.gene066670.t1 MTR_3g086070 25.406 862 437 29 107 804 226 1045 2.34e-46 179
MS.gene066670.t1 MTR_2g063777 25.472 848 427 28 82 785 213 999 2.53e-46 180
MS.gene066670.t1 MTR_3g033080 26.667 765 402 25 120 788 259 960 2.58e-46 179
MS.gene066670.t1 MTR_3g033860 27.157 626 342 18 107 630 242 855 3.15e-46 179
MS.gene066670.t1 MTR_0005s0200 26.800 847 434 31 119 810 276 1091 3.81e-46 179
MS.gene066670.t1 MTR_1g023600 27.004 811 419 29 106 784 221 990 5.04e-46 178
MS.gene066670.t1 MTR_5g035280 27.043 832 447 28 107 802 238 1045 5.77e-46 179
MS.gene066670.t1 MTR_3g011620 26.203 748 392 22 136 786 281 965 6.73e-46 178
MS.gene066670.t1 MTR_6g046570 26.962 790 394 30 120 800 242 957 8.53e-46 178
MS.gene066670.t1 MTR_7g078300 29.508 427 207 11 113 457 258 672 2.07e-45 176
MS.gene066670.t1 MTR_7g078300 41.414 99 56 2 3 100 33 130 2.85e-14 77.4
MS.gene066670.t1 MTR_3g034430 26.635 627 344 18 107 630 242 855 2.07e-45 177
MS.gene066670.t1 MTR_3g021380 26.368 804 452 24 126 798 237 1031 2.08e-45 177
MS.gene066670.t1 MTR_4g050410 25.613 816 453 25 87 799 229 993 2.17e-45 177
MS.gene066670.t1 MTR_8g030860 26.103 816 440 27 87 785 237 1006 2.34e-45 177
MS.gene066670.t1 MTR_7g021000 27.467 608 318 16 96 601 221 807 2.69e-45 175
MS.gene066670.t1 MTR_3g028040 24.832 894 474 31 82 795 213 1088 3.79e-45 176
MS.gene066670.t1 MTR_3g022130 25.704 817 462 27 105 802 216 1006 4.18e-45 176
MS.gene066670.t1 MTR_3g022570 26.500 800 440 26 123 802 286 1057 7.16e-45 175
MS.gene066670.t1 MTR_3g014510 28.943 615 352 23 212 799 432 988 1.81e-44 174
MS.gene066670.t1 MTR_3g014470 29.245 530 300 16 105 579 239 748 3.09e-44 172
MS.gene066670.t1 MTR_4g094540 30.909 440 196 9 120 456 263 697 5.42e-44 171
MS.gene066670.t1 MTR_4g094540 40.000 105 60 3 1 103 30 133 1.34e-11 68.9
MS.gene066670.t1 MTR_3g025360 27.035 651 348 19 119 666 269 895 1.01e-43 171
MS.gene066670.t1 MTR_0603s0010 32.160 426 260 14 219 630 502 912 2.60e-43 170
MS.gene066670.t1 MTR_1g078490 28.837 430 206 10 113 457 251 665 2.88e-43 169
MS.gene066670.t1 MTR_1g078490 38.235 102 58 3 4 104 34 131 2.66e-11 67.8
MS.gene066670.t1 MTR_1g008240 28.496 565 301 14 95 573 225 772 3.90e-43 170
MS.gene066670.t1 MTR_3g021170 24.432 880 455 29 123 800 246 1117 4.69e-43 169
MS.gene066670.t1 MTR_7g491180 30.807 409 187 7 112 434 268 666 5.05e-43 168
MS.gene066670.t1 MTR_7g491180 36.634 101 62 2 4 103 34 133 3.05e-13 74.3
MS.gene066670.t1 MTR_7g091190 30.807 409 187 7 112 434 268 666 5.05e-43 168
MS.gene066670.t1 MTR_7g091190 36.634 101 62 2 4 103 34 133 3.05e-13 74.3
MS.gene066670.t1 MTR_7g091140 28.571 406 196 8 112 432 268 664 8.52e-43 169
MS.gene066670.t1 MTR_7g091140 28.612 353 183 13 113 457 960 1251 2.14e-22 103
MS.gene066670.t1 MTR_7g091140 35.897 117 70 3 4 119 34 146 4.86e-12 70.5
MS.gene066670.t1 MTR_3g036050 28.571 637 355 25 212 799 44 629 1.13e-42 168
MS.gene066670.t1 MTR_3g019000 27.792 788 433 30 130 802 262 1028 1.13e-42 168
MS.gene066670.t1 MTR_3g014390 31.304 460 280 15 212 654 430 870 1.19e-42 168
MS.gene066670.t1 MTR_0267s0070 27.035 651 339 18 107 634 258 895 2.82e-42 167
MS.gene066670.t1 MTR_3g035810 27.410 664 345 20 111 667 218 851 6.11e-42 166
MS.gene066670.t1 MTR_4g119195 28.806 427 211 9 113 457 261 676 7.30e-42 164
MS.gene066670.t1 MTR_4g119195 38.614 101 60 2 4 103 34 133 3.73e-14 77.0
MS.gene066670.t1 MTR_4g119195 28.806 427 211 9 113 457 261 676 8.89e-42 164
MS.gene066670.t1 MTR_4g119195 38.614 101 60 2 4 103 34 133 2.84e-14 77.4
MS.gene066670.t1 MTR_3g071130 27.075 783 396 27 118 802 242 947 1.01e-41 165
MS.gene066670.t1 MTR_3g071070 28.736 609 319 20 118 630 37 626 1.14e-41 164
MS.gene066670.t1 MTR_3g027470 23.890 833 456 27 105 786 151 956 2.21e-41 164
MS.gene066670.t1 MTR_3g032340 25.554 677 335 19 107 630 247 907 3.20e-41 164
MS.gene066670.t1 MTR_8g036195 26.928 765 435 26 107 778 227 960 4.43e-41 163
MS.gene066670.t1 MTR_5g035240 26.038 795 424 27 107 799 237 969 1.48e-40 161
MS.gene066670.t1 MTR_1g045960 27.412 653 379 25 219 804 412 1036 2.04e-40 161
MS.gene066670.t1 MTR_3g024460 28.025 628 386 23 212 802 35 633 2.22e-40 159
MS.gene066670.t1 MTR_3g022400 25.123 812 438 25 119 798 237 1010 2.58e-40 160
MS.gene066670.t1 MTR_0137s0010 33.143 350 205 10 243 574 1 339 2.71e-40 159
MS.gene066670.t1 MTR_3g022400 25.091 825 450 25 119 798 237 1038 3.63e-40 160
MS.gene066670.t1 MTR_3g027200 26.074 675 356 21 105 666 242 886 3.89e-40 160
MS.gene066670.t1 MTR_3g022940 25.156 803 424 25 133 787 253 1026 4.01e-40 160
MS.gene066670.t1 MTR_5g037590 31.915 423 230 17 215 612 402 791 4.94e-40 160
MS.gene066670.t1 MTR_5g040900 25.495 757 379 30 106 781 207 859 5.94e-40 159
MS.gene066670.t1 MTR_2g038760 27.360 731 393 26 107 723 247 953 9.70e-40 159
MS.gene066670.t1 MTR_0002s0120 26.833 682 389 27 173 785 145 785 9.95e-40 158
MS.gene066670.t1 MTR_3g032110 25.782 671 329 19 112 630 251 904 2.36e-39 158
MS.gene066670.t1 MTR_8g445980 30.456 417 189 12 130 457 262 666 4.35e-39 156
MS.gene066670.t1 MTR_8g445980 33.529 170 97 5 3 169 35 191 6.26e-13 73.2
MS.gene066670.t1 MTR_3g020620 30.735 449 280 13 219 654 590 1020 4.45e-39 157
MS.gene066670.t1 MTR_8g010440 25.063 798 370 25 120 800 255 941 4.97e-39 156
MS.gene066670.t1 MTR_2g014730 30.968 465 215 16 123 519 256 682 6.93e-39 156
MS.gene066670.t1 MTR_7g091550 28.675 415 202 10 102 432 259 663 1.47e-38 155
MS.gene066670.t1 MTR_7g091550 37.255 102 62 2 3 103 35 135 2.98e-12 71.2
MS.gene066670.t1 MTR_3g033240 25.092 813 409 28 107 785 242 988 2.38e-38 155
MS.gene066670.t1 MTR_3g023030 26.987 667 320 24 105 666 244 848 4.78e-38 154
MS.gene066670.t1 MTR_3g021400 27.599 529 283 11 123 559 233 753 5.86e-38 153
MS.gene066670.t1 MTR_8g011320 30.046 436 225 12 82 450 170 592 8.33e-38 152
MS.gene066670.t1 MTR_8g027540 30.488 410 175 11 118 435 255 646 1.91e-37 151
MS.gene066670.t1 MTR_8g027540 39.796 98 55 2 3 98 33 128 9.95e-13 72.4
MS.gene066670.t1 MTR_2g038930 29.809 577 352 20 174 723 229 779 2.71e-37 151
MS.gene066670.t1 MTR_8g011590 30.095 422 193 8 107 435 120 532 3.55e-37 150
MS.gene066670.t1 MTR_7g089080 27.892 631 318 19 36 556 491 1094 3.68e-37 151
MS.gene066670.t1 MTR_5g076840 27.250 400 199 7 116 432 264 654 1.75e-36 148
MS.gene066670.t1 MTR_5g076840 40.196 102 59 2 3 103 33 133 8.99e-15 79.0
MS.gene066670.t1 MTR_2g038900 29.791 574 356 20 174 723 392 942 2.16e-36 149
MS.gene066670.t1 MTR_3g007190 22.222 909 463 26 15 797 50 840 3.01e-36 148
MS.gene066670.t1 MTR_2g062360 28.387 465 219 12 112 480 16 462 4.09e-36 145
MS.gene066670.t1 MTR_1g047910 29.902 408 186 10 113 432 267 662 5.02e-36 147
MS.gene066670.t1 MTR_3g435220 27.319 593 314 19 136 630 240 813 6.33e-36 147
MS.gene066670.t1 MTR_7g013560 29.551 423 186 10 106 434 237 641 1.18e-35 145
MS.gene066670.t1 MTR_3g022060 23.784 925 513 38 4 802 60 918 2.06e-35 145
MS.gene066670.t1 MTR_6g046450 27.052 658 333 23 215 781 468 1069 4.93e-35 144
MS.gene066670.t1 MTR_8g011280 29.787 423 191 12 107 434 102 513 5.28e-35 143
MS.gene066670.t1 MTR_8g011550 30.425 424 182 12 107 435 238 643 6.93e-35 143
MS.gene066670.t1 MTR_8g011550 25.852 352 193 16 3 328 33 342 5.78e-13 73.2
MS.gene066670.t1 MTR_4g126000 26.719 887 510 42 1 805 27 855 9.96e-35 142
MS.gene066670.t1 MTR_0083s0120 28.425 584 361 17 232 799 1 543 6.52e-34 140
MS.gene066670.t1 MTR_4g119140 26.364 440 226 9 113 456 244 681 1.57e-33 138
MS.gene066670.t1 MTR_4g119140 38.298 94 56 2 9 101 22 114 1.20e-11 68.9
MS.gene066670.t1 MTR_3g435210 24.476 764 410 27 135 784 84 794 2.41e-33 139
MS.gene066670.t1 MTR_2g039040 27.357 541 291 20 7 461 35 559 1.09e-32 134
MS.gene066670.t1 MTR_8g037220 28.979 421 196 10 107 434 1013 1423 1.26e-32 137
MS.gene066670.t1 MTR_8g037220 28.979 421 196 10 107 434 1234 1644 1.67e-32 136
MS.gene066670.t1 MTR_6g046440 25.473 793 376 29 107 782 226 920 4.67e-32 134
MS.gene066670.t1 MTR_8g011180 28.109 402 187 8 117 431 253 639 4.84e-32 134
MS.gene066670.t1 MTR_8g011180 26.646 319 182 14 1 308 31 308 1.07e-11 69.3
MS.gene066670.t1 MTR_3g022870 23.761 686 355 17 85 666 209 830 5.55e-32 134
MS.gene066670.t1 MTR_6g452490 28.404 426 205 11 113 451 248 660 6.43e-32 134
MS.gene066670.t1 MTR_6g452490 33.333 141 82 4 3 134 33 170 9.19e-12 69.3
MS.gene066670.t1 MTR_0065s0100 28.571 406 183 10 113 435 251 632 1.07e-31 133
MS.gene066670.t1 MTR_1g030770 28.155 412 194 9 118 434 254 658 2.75e-31 132
MS.gene066670.t1 MTR_2g039090 28.661 478 291 18 182 630 386 842 3.09e-31 132
MS.gene066670.t1 MTR_7g078640 25.352 426 193 10 113 457 258 639 1.14e-30 129
MS.gene066670.t1 MTR_7g078640 41.414 99 56 2 3 100 33 130 3.86e-14 77.0
MS.gene066670.t1 MTR_8g039260 29.851 402 217 15 242 630 2 351 2.83e-30 127
MS.gene066670.t1 MTR_3g022740 27.156 545 280 19 277 802 211 657 4.11e-30 127
MS.gene066670.t1 MTR_8g011850 28.641 412 191 9 107 434 1305 1697 4.88e-30 129
MS.gene066670.t1 MTR_0137s0070 39.286 224 124 7 356 574 2 218 6.65e-30 126
MS.gene066670.t1 MTR_0137s0070 39.286 224 124 7 356 574 2 218 8.32e-30 126
MS.gene066670.t1 MTR_7g091110 27.955 440 194 12 112 463 269 673 1.54e-29 126
MS.gene066670.t1 MTR_7g091110 36.000 100 62 2 3 101 33 131 6.13e-13 73.2
MS.gene066670.t1 MTR_8g011600 27.619 420 183 8 107 432 71 463 2.22e-29 125
MS.gene066670.t1 MTR_8g011300 27.945 433 210 12 107 451 241 659 3.18e-29 125
MS.gene066670.t1 MTR_0005s0230 29.095 409 202 17 107 456 97 476 7.93e-29 121
MS.gene066670.t1 MTR_8g011170 28.392 479 211 14 82 444 194 656 1.08e-28 124
MS.gene066670.t1 MTR_8g011170 39.175 97 56 3 3 98 33 127 1.57e-11 68.6
MS.gene066670.t1 MTR_4g022490 88.710 62 7 0 51 112 34 95 3.31e-27 107
MS.gene066670.t1 MTR_3g456070 27.273 407 219 17 119 462 137 529 6.75e-26 114
MS.gene066670.t1 MTR_7g491190 25.112 446 218 12 101 456 219 638 6.76e-26 115
MS.gene066670.t1 MTR_7g091200 25.576 434 207 12 113 456 250 657 9.92e-26 114
MS.gene066670.t1 MTR_3g033130 23.413 709 376 25 87 683 215 868 1.46e-25 114
MS.gene066670.t1 MTR_7g084790 26.486 370 191 9 142 445 62 416 5.03e-24 106
MS.gene066670.t1 MTR_2g060700 27.354 446 209 16 139 523 99 490 6.69e-24 108
MS.gene066670.t1 MTR_3g056310 24.380 484 253 16 126 510 277 746 3.71e-23 106
MS.gene066670.t1 MTR_3g056200 26.386 451 226 19 126 481 275 714 9.61e-23 104
MS.gene066670.t1 MTR_3g456030 24.773 440 221 17 116 462 263 685 9.83e-23 104
MS.gene066670.t1 MTR_3g069210 29.762 336 185 12 161 456 349 673 1.11e-22 104
MS.gene066670.t1 MTR_3g455910 27.949 390 234 18 114 481 260 624 1.51e-22 103
MS.gene066670.t1 MTR_3g056380 29.181 281 174 10 215 481 443 712 1.75e-22 103
MS.gene066670.t1 MTR_3g034650 25.285 613 298 25 212 786 19 509 2.99e-22 103
MS.gene066670.t1 MTR_3g055740 27.616 344 188 13 160 458 296 623 3.61e-22 102
MS.gene066670.t1 MTR_3g056585 25.459 436 221 15 119 462 257 680 8.86e-22 101
MS.gene066670.t1 MTR_3g056360 25.382 524 270 22 59 486 189 687 2.43e-21 100
MS.gene066670.t1 MTR_3g056410 25.382 524 270 22 59 486 180 678 2.49e-21 100
MS.gene066670.t1 MTR_3g012090 24.609 447 212 14 119 456 264 694 5.81e-21 99.4
MS.gene066670.t1 MTR_3g055710 24.886 438 220 16 114 456 97 520 6.38e-21 98.6
MS.gene066670.t1 MTR_3g056190 23.629 474 243 16 112 481 266 724 7.95e-21 98.6
MS.gene066670.t1 MTR_3g018970 37.405 262 146 10 376 630 52 302 2.68e-20 95.9
MS.gene066670.t1 MTR_3g055830 24.494 445 223 16 106 456 252 677 4.03e-20 96.3
MS.gene066670.t1 MTR_3g055720 25.723 346 210 11 173 481 370 705 4.11e-20 96.3
MS.gene066670.t1 MTR_3g455900 25.968 439 212 16 114 456 142 563 8.42e-20 95.1
MS.gene066670.t1 MTR_1g047870 23.185 427 222 11 108 432 21 443 1.40e-19 92.8
MS.gene066670.t1 MTR_3g055870 25.917 436 216 15 114 456 257 678 1.61e-19 94.4
MS.gene066670.t1 MTR_5g035300 27.237 257 102 6 111 284 242 496 1.39e-18 90.1
MS.gene066670.t1 MTR_3g021330 27.731 476 269 19 349 802 150 572 2.50e-18 90.1
MS.gene066670.t1 MTR_5g021080 28.966 290 174 9 224 489 440 721 7.28e-18 89.4
MS.gene066670.t1 MTR_3g011460 28.750 320 168 11 212 494 446 742 8.24e-18 89.0
MS.gene066670.t1 MTR_5g035450 35.149 202 118 5 277 476 1 191 8.86e-18 87.0
MS.gene066670.t1 MTR_7g022290 27.572 243 146 6 215 450 54 273 1.75e-17 87.0
MS.gene066670.t1 MTR_1g016210 27.219 338 189 13 174 462 374 703 1.94e-17 87.8
MS.gene066670.t1 MTR_2g038510 32.331 266 143 13 224 462 455 710 5.11e-17 86.3
MS.gene066670.t1 MTR_3g011480 30.576 278 154 10 212 467 446 706 9.33e-17 85.5
MS.gene066670.t1 MTR_3g011420 24.950 497 241 19 126 513 275 748 1.33e-16 85.1
MS.gene066670.t1 MTR_3g056320 24.307 469 240 18 112 481 267 719 1.37e-16 85.1
MS.gene066670.t1 MTR_3g056620 23.140 484 240 17 113 481 269 735 2.14e-16 84.3
MS.gene066670.t1 MTR_5g027860 25.813 523 268 22 59 481 198 700 2.54e-16 84.3
MS.gene066670.t1 MTR_3g011300 30.827 266 157 11 212 462 446 699 9.02e-16 82.4
MS.gene066670.t1 MTR_3g011390 29.938 324 183 13 212 513 448 749 1.30e-15 82.0
MS.gene066670.t1 MTR_3g056590 23.483 511 235 20 114 494 261 745 1.34e-15 81.6
MS.gene066670.t1 MTR_3g012310 24.424 434 215 14 125 456 273 695 1.42e-15 81.6
MS.gene066670.t1 MTR_3g012250 24.153 443 201 14 125 456 282 700 1.84e-15 81.3
MS.gene066670.t1 MTR_0691s0020 29.538 325 183 13 212 513 446 747 2.26e-15 81.3
MS.gene066670.t1 MTR_5g039570 33.971 209 117 9 420 618 388 585 5.01e-15 79.3
MS.gene066670.t1 MTR_4g073840 23.992 471 254 16 121 494 283 746 5.12e-15 80.1
MS.gene066670.t1 MTR_3g011360 30.147 272 162 10 212 467 416 675 8.29e-15 79.3
MS.gene066670.t1 MTR_3g056625 24.694 409 222 17 165 509 44 430 2.87e-14 77.0
MS.gene066670.t1 MTR_1g078190 23.849 478 231 18 118 481 260 718 4.03e-14 77.0
MS.gene066670.t1 MTR_3g012240 23.485 396 205 11 126 432 320 706 4.54e-14 77.0
MS.gene066670.t1 MTR_7g078630 24.074 378 207 11 117 443 196 544 5.11e-14 76.6
MS.gene066670.t1 MTR_7g078630 25.000 244 116 5 215 457 357 534 5.16e-12 70.1
MS.gene066670.t1 MTR_6g037690 38.235 102 61 2 3 103 33 133 6.37e-14 74.3
MS.gene066670.t1 MTR_2g079250 42.268 97 55 1 64 159 1 97 9.84e-14 68.6
MS.gene066670.t1 MTR_3g055930 25.362 414 245 15 165 529 376 774 5.11e-13 73.6
MS.gene066670.t1 MTR_3g011280 27.187 320 191 12 215 513 449 747 6.13e-13 73.2
MS.gene066670.t1 MTR_3g011280 27.187 320 191 12 215 513 417 715 7.99e-13 72.8
MS.gene066670.t1 MTR_1g011990 26.047 430 229 19 119 491 250 647 2.88e-12 70.9
MS.gene066670.t1 MTR_5g027900 31.295 278 157 14 224 481 439 702 3.90e-12 70.5
MS.gene066670.t1 MTR_8g062140 25.636 511 251 22 340 778 664 1117 4.10e-12 70.9
MS.gene066670.t1 MTR_1643s0010 27.897 233 140 8 443 666 1 214 7.96e-12 67.8
MS.gene066670.t1 MTR_3g012270 23.207 474 214 15 125 481 282 722 8.52e-12 69.3
MS.gene066670.t1 MTR_5g027910 28.682 258 159 12 215 456 434 682 2.18e-11 68.2
MS.gene066670.t1 MTR_7g091560 28.646 192 96 6 274 456 26 185 5.17e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene066670.t1 AT3G14460 29.915 585 295 20 111 600 248 812 1.98e-47 183
MS.gene066670.t1 AT3G14470 25.345 797 431 29 107 786 243 992 2.27e-43 170
MS.gene066670.t1 AT3G14470 25.345 797 431 29 107 786 243 992 2.27e-43 170
MS.gene066670.t1 AT3G07040 23.065 633 330 24 126 649 271 855 3.12e-18 90.5
MS.gene066670.t1 AT1G69550 32.353 272 134 12 321 576 875 1112 5.42e-17 86.7
MS.gene066670.t1 AT1G69550 27.721 487 257 20 321 799 827 1226 2.25e-16 84.7
MS.gene066670.t1 AT1G69550 26.033 484 264 19 364 791 725 1170 2.28e-11 68.6
MS.gene066670.t1 AT3G50950 23.947 451 233 16 126 481 252 687 5.26e-16 83.2
MS.gene066670.t1 AT3G50950 23.947 451 233 16 126 481 252 687 5.26e-16 83.2
MS.gene066670.t1 AT2G14080 34.637 179 108 5 321 497 736 907 1.16e-15 82.4
MS.gene066670.t1 AT2G14080 38.462 143 73 3 321 456 712 846 3.83e-15 80.5
MS.gene066670.t1 AT2G14080 30.996 271 156 11 312 577 659 903 1.39e-12 72.4
MS.gene066670.t1 AT2G14080 34.637 179 108 5 321 497 603 774 1.45e-15 82.0
MS.gene066670.t1 AT2G14080 38.462 143 73 3 321 456 579 713 4.64e-15 80.1
MS.gene066670.t1 AT2G14080 30.996 271 156 11 312 577 526 770 1.61e-12 72.0
MS.gene066670.t1 AT5G44510 37.500 136 79 4 363 497 688 818 1.24e-13 75.5
MS.gene066670.t1 AT5G44510 37.500 136 79 4 363 497 688 818 1.30e-13 75.5
MS.gene066670.t1 AT5G44510 37.500 136 79 4 363 497 688 818 1.30e-13 75.5
MS.gene066670.t1 AT5G44510 37.500 136 79 4 363 497 688 818 1.41e-13 75.5
MS.gene066670.t1 AT3G46710 23.864 528 284 16 21 456 156 657 2.35e-13 74.7
MS.gene066670.t1 AT3G25510 36.111 144 75 5 321 456 616 750 3.80e-13 73.9
MS.gene066670.t1 AT3G25510 35.971 139 81 5 321 456 569 702 8.48e-12 69.7
MS.gene066670.t1 AT3G25510 36.111 144 75 5 321 456 616 750 3.80e-13 73.9
MS.gene066670.t1 AT3G25510 35.971 139 81 5 321 456 569 702 8.48e-12 69.7
MS.gene066670.t1 AT5G11250 36.170 141 74 4 321 454 714 845 1.47e-12 72.0
MS.gene066670.t1 AT1G27180 27.708 480 252 27 322 778 791 1198 1.58e-12 72.0
MS.gene066670.t1 AT1G27180 27.708 480 252 27 322 778 615 1022 1.62e-12 72.0
MS.gene066670.t1 AT1G27180 27.708 480 252 27 322 778 615 1022 1.62e-12 72.0
MS.gene066670.t1 AT1G27180 27.708 480 252 27 322 778 615 1022 1.62e-12 72.0
MS.gene066670.t1 AT5G11250 36.170 141 74 4 321 454 632 763 1.84e-12 72.0
MS.gene066670.t1 AT5G11250 36.170 141 74 4 321 454 632 763 1.84e-12 72.0
MS.gene066670.t1 AT1G27180 27.708 480 252 27 322 778 789 1196 1.86e-12 72.0
MS.gene066670.t1 AT1G27180 27.708 480 252 27 322 778 789 1196 1.86e-12 72.0
MS.gene066670.t1 AT1G27180 27.708 480 252 27 322 778 953 1360 2.25e-12 71.6
MS.gene066670.t1 AT3G04220 35.246 122 70 4 343 456 696 816 4.82e-11 67.0
MS.gene066670.t1 AT3G04220 35.246 122 70 4 343 456 725 845 4.89e-11 67.0

Find 147 sgRNAs with CRISPR-Local

Find 188 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCTCAATGCTTACAAATTA+AGG 0.174739 4.2:-80262941 MS.gene066670:CDS
GCTAAGCATATGAATTTAAT+AGG 0.195988 4.2:-80262423 MS.gene066670:CDS
ATCAAGGCATTAACAATAAA+TGG 0.202136 4.2:-80262288 MS.gene066670:CDS
ATCTTCTCTGACCAACATTA+AGG 0.220956 4.2:+80264155 None:intergenic
CAAACCCGCCATGTCTCTTT+TGG 0.236134 4.2:-80263002 MS.gene066670:CDS
ACATCTTGATCGGTTATTAT+TGG 0.241101 4.2:-80262394 MS.gene066670:CDS
TGCAGTGATGTTACCCATTC+AGG 0.248115 4.2:+80261565 None:intergenic
TAGTTCGGTCAATTTAAATT+TGG 0.249475 4.2:-80262244 MS.gene066670:CDS
GGAATGAGGATCGTGATATT+TGG 0.251375 4.2:-80263727 MS.gene066670:CDS
TACCAACTTCCAAAGATCTT+TGG 0.263797 4.2:+80262659 None:intergenic
TATTGTTAATGCCTTGATAT+TGG 0.273628 4.2:+80262293 None:intergenic
GAATACTTATCGATTGATTA+TGG 0.291190 4.2:-80261970 MS.gene066670:CDS
CGAGATCAAGGCTGTGGTTT+TGG 0.298700 4.2:-80264422 MS.gene066670:CDS
CCAGCCAGAGTTGAATTTGA+TGG 0.303502 4.2:+80264371 None:intergenic
GCTTTGAATTGGATTCTTCC+TGG 0.331489 4.2:-80262980 MS.gene066670:CDS
GAGAGTTGCCCAAAGATCTT+TGG 0.339595 4.2:-80262668 MS.gene066670:CDS
ACCAACTTCCAAAGATCTTT+GGG 0.343827 4.2:+80262660 None:intergenic
TATTGGTGATATGTACTTCA+TGG 0.344701 4.2:-80263183 MS.gene066670:CDS
AAACAATATTGATTCGGCTT+TGG 0.358457 4.2:-80263256 MS.gene066670:CDS
GCATTAACAATAAATGGATT+TGG 0.359388 4.2:-80262282 MS.gene066670:CDS
AGTACAAGTTTAGAAGATAT+TGG 0.364805 4.2:-80263200 MS.gene066670:CDS
CATGTACAATATCATGCATT+TGG 0.368678 4.2:+80263093 None:intergenic
TTCATATGCTTAGCTTCTGT+TGG 0.371506 4.2:+80262432 None:intergenic
TTCATCCTTCCAATACTAGA+TGG 0.376439 4.2:+80262804 None:intergenic
TATCATTGAATATGTACTTA+AGG 0.377043 4.2:+80262130 None:intergenic
TAAGCTTCCAATGCTTCTAA+TGG 0.386405 4.2:+80263460 None:intergenic
AAGAAGATATTTGCTTGTCT+TGG 0.390625 4.2:-80263759 MS.gene066670:CDS
TCAGGAGGGTAGTGCTTTCA+TGG 0.404435 4.2:-80261912 MS.gene066670:CDS
TCTTCTCTGACCAACATTAA+GGG 0.417423 4.2:+80264156 None:intergenic
TGCTTGTCTTGGATGACAAT+TGG 0.419451 4.2:-80263748 MS.gene066670:CDS
TTCCACAACACACATATATC+AGG 0.421689 4.2:-80261930 MS.gene066670:CDS
TTGGAAGGATGAAACATCTA+AGG 0.424468 4.2:-80262794 MS.gene066670:CDS
TTAGCAAAACAATATTGATT+CGG 0.430663 4.2:-80263262 MS.gene066670:CDS
TTTGGATGCAGAGGAGCAGC+AGG 0.433387 4.2:-80264404 MS.gene066670:CDS
GAAGGAACGTTAACACTTTG+AGG 0.434337 4.2:+80261683 None:intergenic
TGTAGGGGTGGAAGATCAAT+AGG 0.438256 4.2:-80261500 None:intergenic
ATCTTAACTGCATAAATTCA+AGG 0.438354 4.2:-80262833 MS.gene066670:CDS
ATGGTTGTTACAGCATGAAA+TGG 0.439045 4.2:-80261720 MS.gene066670:CDS
ATCTTACATCTATACCTGAA+TGG 0.441628 4.2:-80261579 MS.gene066670:CDS
ACATGTCGAGACGGTACCTT+CGG 0.452661 4.2:+80261520 None:intergenic
GGGTTTGTTTGTCGATATGC+TGG 0.455330 4.2:+80263018 None:intergenic
TAGGAGGATTACATAATTTG+AGG 0.455834 4.2:-80262497 MS.gene066670:CDS
GAGTTGAATTTGATGGTTGT+TGG 0.459331 4.2:+80264378 None:intergenic
GCATGATATTGTACATGATC+TGG 0.467188 4.2:-80263087 MS.gene066670:CDS
AGGAAGATTCCATCTAGTAT+TGG 0.469537 4.2:-80262813 MS.gene066670:CDS
TCTTACATCTATACCTGAAT+GGG 0.470384 4.2:-80261578 MS.gene066670:CDS
TATCTGAAGATACTCTACTT+TGG 0.471191 4.2:+80261852 None:intergenic
CTAACTCAGTTATAGACCTT+GGG 0.471615 4.2:+80262733 None:intergenic
GCCCAAAGATCTTTGGAAGT+TGG 0.474845 4.2:-80262661 MS.gene066670:CDS
TATAACTGAGTTAGTTAACT+TGG 0.476080 4.2:-80262724 MS.gene066670:CDS
TCATATGCTTAGCTTCTGTT+GGG 0.477061 4.2:+80262433 None:intergenic
GGAATTGTTTAGAACTTGAC+AGG 0.478167 4.2:+80262865 None:intergenic
CCATCAAATTCAACTCTGGC+TGG 0.479866 4.2:-80264371 MS.gene066670:CDS
AAGAGAAGTTGGAACTTGCC+AGG 0.481440 4.2:+80262962 None:intergenic
TCAAACACTGACACAATTTG+TGG 0.481929 4.2:-80262559 MS.gene066670:CDS
CTGCTGAAAGGAGGAGCAAA+AGG 0.482102 4.2:-80263689 MS.gene066670:CDS
AGTGCTAAAGCTAGTGAACT+AGG 0.483017 4.2:-80262516 MS.gene066670:CDS
TTGATCGGTTATTATTGGAA+TGG 0.483827 4.2:-80262389 MS.gene066670:CDS
GCTTCTATGCCGCATGGGAT+AGG 0.484978 4.2:-80262597 MS.gene066670:CDS
GGCAACCTTCTCACTTCTTG+CGG 0.485183 4.2:+80263649 None:intergenic
CTAAGCATATGAATTTAATA+GGG 0.485872 4.2:-80262422 MS.gene066670:CDS
TAAGCATTGAGAAGAGAAGT+TGG 0.486760 4.2:+80262951 None:intergenic
TGACCTTTCTTGTAGTGAGA+TGG 0.489211 4.2:-80262766 MS.gene066670:CDS
CCACTCGCCATTAGAAGCAT+TGG 0.492262 4.2:-80263467 MS.gene066670:CDS
CTTAGACATCTTGAGTTGGA+TGG 0.504406 4.2:-80262633 MS.gene066670:CDS
AAGGTACCGTCTCGACATGT+AGG 0.506746 4.2:-80261517 MS.gene066670:CDS
ACTAACTCAGTTATAGACCT+TGG 0.507668 4.2:+80262732 None:intergenic
GTAATGTGCTGAAGCCCCTC+AGG 0.509444 4.2:+80261637 None:intergenic
ACGACTTGTGATAACTGCCT+TGG 0.510215 4.2:-80262472 MS.gene066670:CDS
AGAACTTAGTAAGAGAATTG+AGG 0.511582 4.2:-80264179 MS.gene066670:CDS
TAACTGCCTTGGAACATTTG+AGG 0.511747 4.2:-80262461 MS.gene066670:CDS
TGAGATGGATAAAGTGCAAT+CGG 0.511850 4.2:-80263804 MS.gene066670:CDS
GGACAATATGTCCGAGATCA+AGG 0.515712 4.2:-80264434 MS.gene066670:CDS
ATTCGGCTTTGGATTGCACA+TGG 0.521894 4.2:-80263245 MS.gene066670:CDS
CATGTCGAGACGGTACCTTC+GGG 0.525353 4.2:+80261521 None:intergenic
AGGAGGATTACATAATTTGA+GGG 0.526600 4.2:-80262496 MS.gene066670:CDS
TGGTGTGACATTGTCTAGTT+CGG 0.527195 4.2:-80262259 MS.gene066670:CDS
AATTCTTAAAGTCTGTAAAG+TGG 0.528617 4.2:+80261615 None:intergenic
TTCTTGTAGTGAGATGGTTG+AGG 0.533209 4.2:-80262760 MS.gene066670:CDS
AGGTACCGTCTCGACATGTA+GGG 0.534336 4.2:-80261516 MS.gene066670:CDS
TTAACAATAAATGGATTTGG+TGG 0.538086 4.2:-80262279 MS.gene066670:CDS
AGAAGATGTACCACTAGCCT+TGG 0.539601 4.2:+80263628 None:intergenic
GACTTAGCTTCTATGCCGCA+TGG 0.543534 4.2:-80262603 MS.gene066670:CDS
TTGTTTAGAACTTGACAGGA+TGG 0.543730 4.2:+80262869 None:intergenic
AGAATTGAGGCCCTTAATGT+TGG 0.544074 4.2:-80264166 MS.gene066670:intron
GAATGGAATGAACAGAATGT+TGG 0.544325 4.2:-80262372 MS.gene066670:CDS
ATCTCAAACAAATGTTGAGA+TGG 0.544400 4.2:-80263819 MS.gene066670:CDS
CAAAACCACAGCCTTGATCT+CGG 0.546508 4.2:+80264423 None:intergenic
AAAATGAAAGATTTACCTGA+GGG 0.546926 4.2:-80261652 MS.gene066670:CDS
CAACCATCTCACTACAAGAA+AGG 0.548828 4.2:+80262763 None:intergenic
TCTTCTACAGTCCAATATCA+AGG 0.553440 4.2:-80262304 MS.gene066670:CDS
ACAACCATCAAATTCAACTC+TGG 0.554597 4.2:-80264375 MS.gene066670:CDS
GTAAGAAAAGAGAAGCTGGT+TGG 0.554632 4.2:+80264222 None:intergenic
CACTGAAGACTTGAGGCGAC+AGG 0.557485 4.2:-80264296 MS.gene066670:CDS
TAGGGAAGTCACATCTTGAT+CGG 0.561434 4.2:-80262404 MS.gene066670:CDS
AGATGGTTGAGGAGCTCCCA+AGG 0.564882 4.2:-80262749 MS.gene066670:CDS
AGAGAAGATATTACAGCAAG+CGG 0.566977 4.2:-80261884 MS.gene066670:CDS
AGTTAGCAAATCTGAAAGGA+TGG 0.569392 4.2:-80262050 MS.gene066670:CDS
CTTGGATGACAATTGGAATG+AGG 0.575720 4.2:-80263741 MS.gene066670:CDS
ATTGCATGCAGAAGGAGGAT+TGG 0.576640 4.2:-80263433 MS.gene066670:CDS
GAGAGATGATCTTGACAAGC+TGG 0.576674 4.2:-80264458 MS.gene066670:CDS
TGATGGCAATGAGTTTGAAA+AGG 0.577183 4.2:-80262349 MS.gene066670:CDS
TGCAGTTAAGATTCAGCACA+CGG 0.577216 4.2:+80262844 None:intergenic
GATCCGTGCAATGATGAAGA+TGG 0.578357 4.2:-80261739 MS.gene066670:CDS
TTCGGCTTTGGATTGCACAT+GGG 0.582648 4.2:-80263244 MS.gene066670:CDS
CAATTGATGACACTGCTGAA+AGG 0.584600 4.2:-80263701 MS.gene066670:CDS
CTTAATGTATTGCATGCAGA+AGG 0.585713 4.2:-80263441 MS.gene066670:CDS
GTAGCGAAGAAGAAATCTCA+AGG 0.592619 4.2:-80262020 MS.gene066670:CDS
CTCCTGATATATGTGTGTTG+TGG 0.595648 4.2:+80261928 None:intergenic
AAGTCTTAGACATCTTGAGT+TGG 0.599330 4.2:-80262637 MS.gene066670:CDS
CAACCATCTTCATCATTGCA+CGG 0.601113 4.2:+80261736 None:intergenic
GAGAAGGTTGCCAAGGCTAG+TGG 0.603043 4.2:-80263638 MS.gene066670:intron
AATGTATTGCATGCAGAAGG+AGG 0.603469 4.2:-80263438 MS.gene066670:CDS
AAAGCCAAAAGAGACATGGC+GGG 0.605827 4.2:+80262998 None:intergenic
TATGTCCGAGATCAAGGCTG+TGG 0.608040 4.2:-80264428 MS.gene066670:CDS
TATCACCGCAAGAAGTGAGA+AGG 0.609712 4.2:-80263654 MS.gene066670:CDS
CACAACACACATATATCAGG+AGG 0.611290 4.2:-80261927 MS.gene066670:CDS
CAGGAGGGTAGTGCTTTCAT+GGG 0.611313 4.2:-80261911 MS.gene066670:CDS
AGATTCCATCTAGTATTGGA+AGG 0.612435 4.2:-80262809 MS.gene066670:CDS
GATGAGTTAGCAAATCTGAA+AGG 0.620442 4.2:-80262054 MS.gene066670:CDS
TTGAATATGTACTTAAGGCG+AGG 0.621589 4.2:+80262135 None:intergenic
CCAATGCTTCTAATGGCGAG+TGG 0.625797 4.2:+80263467 None:intergenic
ACTTTAACACTGAAGACTTG+AGG 0.630582 4.2:-80264303 MS.gene066670:CDS
AAGAAGTGAGAAGGTTGCCA+AGG 0.635851 4.2:-80263645 MS.gene066670:CDS
TAGCGAAGAAGAAATCTCAA+GGG 0.636151 4.2:-80262019 MS.gene066670:CDS
GAGGCAAATTATACATGGTG+AGG 0.638218 4.2:+80262154 None:intergenic
TTGATGACACTGCTGAAAGG+AGG 0.641262 4.2:-80263698 MS.gene066670:CDS
TCCACCCCTACATGTCGAGA+CGG 0.642281 4.2:+80261511 None:intergenic
AAGGCGAGGCAAATTATACA+TGG 0.643202 4.2:+80262149 None:intergenic
ACTTAGCTTCTATGCCGCAT+GGG 0.643372 4.2:-80262602 MS.gene066670:CDS
GCAATGCCTCAAATGTTCCA+AGG 0.647781 4.2:+80262455 None:intergenic
AGATGATCTTGACAAGCTGG+TGG 0.655618 4.2:-80264455 MS.gene066670:CDS
ATTCAAAGCCAAAAGAGACA+TGG 0.658470 4.2:+80262994 None:intergenic
TGATATCAAAGATTGCCCGA+AGG 0.661320 4.2:-80261536 MS.gene066670:CDS
ACCGTCTCGACATGTAGGGG+TGG 0.665874 4.2:-80261512 MS.gene066670:CDS
GTCATCTTTCCTATCCCATG+CGG 0.671206 4.2:+80262588 None:intergenic
CTAATGAAAATTGATGAACA+AGG 0.674631 4.2:-80263389 MS.gene066670:intron
AATGAACAGAATGTTGGTGA+TGG 0.676945 4.2:-80262366 MS.gene066670:CDS
CAAAGCCAAAAGAGACATGG+CGG 0.677365 4.2:+80262997 None:intergenic
TTGGATGCAGAGGAGCAGCA+GGG 0.680480 4.2:-80264403 MS.gene066670:CDS
GGAGGATTACATAATTTGAG+GGG 0.681443 4.2:-80262495 MS.gene066670:CDS
GGTACCGTCTCGACATGTAG+GGG 0.682800 4.2:-80261515 MS.gene066670:CDS
GGTGATGACCAGTAACAAGA+CGG 0.684765 4.2:-80264275 MS.gene066670:CDS
GCTAAAGCTAGTGAACTAGG+AGG 0.686751 4.2:-80262513 MS.gene066670:CDS
AGCGAAGAAGAAATCTCAAG+GGG 0.691044 4.2:-80262018 MS.gene066670:CDS
ACAACACACATATATCAGGA+GGG 0.695740 4.2:-80261926 MS.gene066670:CDS
AAATGAAAGATTTACCTGAG+GGG 0.710561 4.2:-80261651 MS.gene066670:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATCTTTTAGTTAATAAAAA+GGG - chr4.2:80262920-80262939 MS.gene066670:CDS 10.0%
!!! TTATCTTTTAGTTAATAAAA+AGG - chr4.2:80262919-80262938 MS.gene066670:CDS 10.0%
!! ATCTTCTATCTTCAATTTAA+AGG - chr4.2:80262349-80262368 MS.gene066670:CDS 20.0%
!! CTAAGCATATGAATTTAATA+GGG - chr4.2:80263539-80263558 MS.gene066670:intron 20.0%
!! TATCATTGAATATGTACTTA+AGG + chr4.2:80263834-80263853 None:intergenic 20.0%
!! TCTTCTATCTTCAATTTAAA+GGG - chr4.2:80262350-80262369 MS.gene066670:CDS 20.0%
!!! AACATTTTGAGTTGAAAAAA+TGG - chr4.2:80262066-80262085 MS.gene066670:CDS 20.0%
!!! ACATTTTGAGTTGAAAAAAT+GGG - chr4.2:80262067-80262086 MS.gene066670:CDS 20.0%
!!! GTTATTTCTATAATTGGAAT+TGG - chr4.2:80261987-80262006 MS.gene066670:CDS 20.0%
!!! GTTTCAGTTATTTCTATAAT+TGG - chr4.2:80261981-80262000 MS.gene066670:CDS 20.0%
!!! TTAGCAAAACAATATTGATT+CGG - chr4.2:80262699-80262718 MS.gene066670:CDS 20.0%
! AAAAATGAAAGATTTACCTG+AGG - chr4.2:80264308-80264327 MS.gene066670:CDS 25.0%
! AAAATGAAAGATTTACCTGA+GGG - chr4.2:80264309-80264328 MS.gene066670:CDS 25.0%
! AAATTGTGAAGTAATGTTCA+GGG - chr4.2:80262468-80262487 MS.gene066670:CDS 25.0%
! AATTCTTAAAGTCTGTAAAG+TGG + chr4.2:80264349-80264368 None:intergenic 25.0%
! AGTACAAGTTTAGAAGATAT+TGG - chr4.2:80262761-80262780 MS.gene066670:CDS 25.0%
! ATCTTAACTGCATAAATTCA+AGG - chr4.2:80263128-80263147 MS.gene066670:CDS 25.0%
! ATTTCTATAATTGGAATTGG+AGG - chr4.2:80261990-80262009 MS.gene066670:CDS 25.0%
! CTAATGAAAATTGATGAACA+AGG - chr4.2:80262572-80262591 MS.gene066670:CDS 25.0%
! GCTAAGCATATGAATTTAAT+AGG - chr4.2:80263538-80263557 MS.gene066670:intron 25.0%
! TAGTTCGGTCAATTTAAATT+TGG - chr4.2:80263717-80263736 MS.gene066670:CDS 25.0%
! TATAACTGAGTTAGTTAACT+TGG - chr4.2:80263237-80263256 MS.gene066670:CDS 25.0%
! TATTGTTAATGCCTTGATAT+TGG + chr4.2:80263671-80263690 None:intergenic 25.0%
! TTCTCAATGCTTACAAATTA+AGG - chr4.2:80263020-80263039 MS.gene066670:CDS 25.0%
!! ATCAAGGCATTAACAATAAA+TGG - chr4.2:80263673-80263692 MS.gene066670:CDS 25.0%
!! GAATACTTATCGATTGATTA+TGG - chr4.2:80263991-80264010 MS.gene066670:intron 25.0%
!! GCATTAACAATAAATGGATT+TGG - chr4.2:80263679-80263698 MS.gene066670:CDS 25.0%
!! TCAGGTAAATCTTTCATTTT+TGG + chr4.2:80264309-80264328 None:intergenic 25.0%
!! TTAACAATAAATGGATTTGG+TGG - chr4.2:80263682-80263701 MS.gene066670:CDS 25.0%
!! TTCAATTTTAAATCTCTCAG+TGG - chr4.2:80264141-80264160 MS.gene066670:intron 25.0%
!! TTGCTAATGAAATAGTCTTT+TGG + chr4.2:80262686-80262705 None:intergenic 25.0%
!!! CAGGTAAATCTTTCATTTTT+GGG + chr4.2:80264308-80264327 None:intergenic 25.0%
!!! TCTGATGATTTTGATGTAAA+AGG - chr4.2:80262098-80262117 MS.gene066670:CDS 25.0%
AAATGAAAGATTTACCTGAG+GGG - chr4.2:80264310-80264329 MS.gene066670:CDS 30.0%
AAGAAGATATTTGCTTGTCT+TGG - chr4.2:80262202-80262221 MS.gene066670:CDS 30.0%
AAGCACTTCTTCAAATGATA+TGG + chr4.2:80262644-80262663 None:intergenic 30.0%
AATTGTGAAGTAATGTTCAG+GGG - chr4.2:80262469-80262488 MS.gene066670:CDS 30.0%
ACATCTTGATCGGTTATTAT+TGG - chr4.2:80263567-80263586 MS.gene066670:intron 30.0%
AGAACTTAGTAAGAGAATTG+AGG - chr4.2:80261782-80261801 MS.gene066670:CDS 30.0%
AGGAGGATTACATAATTTGA+GGG - chr4.2:80263465-80263484 MS.gene066670:CDS 30.0%
ATCTCAAACAAATGTTGAGA+TGG - chr4.2:80262142-80262161 MS.gene066670:CDS 30.0%
ATCTTACATCTATACCTGAA+TGG - chr4.2:80264382-80264401 MS.gene066670:CDS 30.0%
CATGTACAATATCATGCATT+TGG + chr4.2:80262871-80262890 None:intergenic 30.0%
GAAATTGTGAAGTAATGTTC+AGG - chr4.2:80262467-80262486 MS.gene066670:CDS 30.0%
GTCTTGATGAAAAACAATCT+TGG - chr4.2:80262372-80262391 MS.gene066670:CDS 30.0%
TAGGAGGATTACATAATTTG+AGG - chr4.2:80263464-80263483 MS.gene066670:CDS 30.0%
TATCTGAAGATACTCTACTT+TGG + chr4.2:80264112-80264131 None:intergenic 30.0%
TCTTACATCTATACCTGAAT+GGG - chr4.2:80264383-80264402 MS.gene066670:CDS 30.0%
TTGATCGGTTATTATTGGAA+TGG - chr4.2:80263572-80263591 MS.gene066670:intron 30.0%
! GCTTCTCTTTTCTTACAAAA+TGG - chr4.2:80261746-80261765 MS.gene066670:CDS 30.0%
! TATTGGTGATATGTACTTCA+TGG - chr4.2:80262778-80262797 MS.gene066670:CDS 30.0%
! TTTTGTAAGAAAAGAGAAGC+TGG + chr4.2:80261746-80261765 None:intergenic 30.0%
!! AAACAATATTGATTCGGCTT+TGG - chr4.2:80262705-80262724 MS.gene066670:CDS 30.0%
!! ATAGAGTTGTTGTTTAACAC+CGG - chr4.2:80261939-80261958 MS.gene066670:CDS 30.0%
!!! CTTTCATTTTTGGGATTTGA+AGG + chr4.2:80264299-80264318 None:intergenic 30.0%
!!! TTCTTCCTTCAATTTTTTCG+CGG + chr4.2:80262187-80262206 None:intergenic 30.0%
AACTTCTTCGTCACGAATAA+AGG + chr4.2:80261889-80261908 None:intergenic 35.0%
AAGTCTTAGACATCTTGAGT+TGG - chr4.2:80263324-80263343 MS.gene066670:intron 35.0%
ACAACACACATATATCAGGA+GGG - chr4.2:80264035-80264054 MS.gene066670:intron 35.0%
ACAACCATCAAATTCAACTC+TGG - chr4.2:80261586-80261605 MS.gene066670:CDS 35.0%
ACCAACTTCCAAAGATCTTT+GGG + chr4.2:80263304-80263323 None:intergenic 35.0%
ACTAACTCAGTTATAGACCT+TGG + chr4.2:80263232-80263251 None:intergenic 35.0%
ACTTTAACACTGAAGACTTG+AGG - chr4.2:80261658-80261677 MS.gene066670:CDS 35.0%
AGAAGTTATTGGAAGAGAAG+AGG - chr4.2:80261902-80261921 MS.gene066670:CDS 35.0%
AGAGAAGATATTACAGCAAG+CGG - chr4.2:80264077-80264096 MS.gene066670:intron 35.0%
AGGAAGATTCCATCTAGTAT+TGG - chr4.2:80263148-80263167 MS.gene066670:CDS 35.0%
AGTTAGCAAATCTGAAAGGA+TGG - chr4.2:80263911-80263930 MS.gene066670:intron 35.0%
ATAATTGGAATTGGAGGACT+GGG - chr4.2:80261996-80262015 MS.gene066670:CDS 35.0%
ATCTTCTCTGACCAACATTA+AGG + chr4.2:80261809-80261828 None:intergenic 35.0%
ATGGTTGTTACAGCATGAAA+TGG - chr4.2:80264241-80264260 MS.gene066670:CDS 35.0%
ATTCAAAGCCAAAAGAGACA+TGG + chr4.2:80262970-80262989 None:intergenic 35.0%
ATTCGTGACGAAGAAGTTAT+TGG - chr4.2:80261891-80261910 MS.gene066670:CDS 35.0%
ATTCTCTTTCACATTGTTGC+CGG + chr4.2:80261961-80261980 None:intergenic 35.0%
CTAACTCAGTTATAGACCTT+GGG + chr4.2:80263231-80263250 None:intergenic 35.0%
CTTAATGTATTGCATGCAGA+AGG - chr4.2:80262520-80262539 MS.gene066670:CDS 35.0%
GAATGGAATGAACAGAATGT+TGG - chr4.2:80263589-80263608 MS.gene066670:intron 35.0%
GATGAGTTAGCAAATCTGAA+AGG - chr4.2:80263907-80263926 MS.gene066670:intron 35.0%
GCATGATATTGTACATGATC+TGG - chr4.2:80262874-80262893 MS.gene066670:CDS 35.0%
GGAGGATTACATAATTTGAG+GGG - chr4.2:80263466-80263485 MS.gene066670:CDS 35.0%
TAAGCTTCCAATGCTTCTAA+TGG + chr4.2:80262504-80262523 None:intergenic 35.0%
TACCAACTTCCAAAGATCTT+TGG + chr4.2:80263305-80263324 None:intergenic 35.0%
TAGCGAAGAAGAAATCTCAA+GGG - chr4.2:80263942-80263961 MS.gene066670:intron 35.0%
TATAATTGGAATTGGAGGAC+TGG - chr4.2:80261995-80262014 MS.gene066670:CDS 35.0%
TCAAACACTGACACAATTTG+TGG - chr4.2:80263402-80263421 MS.gene066670:CDS 35.0%
TCATATGCTTAGCTTCTGTT+GGG + chr4.2:80263531-80263550 None:intergenic 35.0%
TCTTCTACAGTCCAATATCA+AGG - chr4.2:80263657-80263676 MS.gene066670:CDS 35.0%
TCTTCTCTGACCAACATTAA+GGG + chr4.2:80261808-80261827 None:intergenic 35.0%
TGAGATGGATAAAGTGCAAT+CGG - chr4.2:80262157-80262176 MS.gene066670:CDS 35.0%
TGATGGCAATGAGTTTGAAA+AGG - chr4.2:80263612-80263631 MS.gene066670:intron 35.0%
TTCATATGCTTAGCTTCTGT+TGG + chr4.2:80263532-80263551 None:intergenic 35.0%
TTCATCCTTCCAATACTAGA+TGG + chr4.2:80263160-80263179 None:intergenic 35.0%
TTCCACAACACACATATATC+AGG - chr4.2:80264031-80264050 MS.gene066670:intron 35.0%
TTGAATATGTACTTAAGGCG+AGG + chr4.2:80263829-80263848 None:intergenic 35.0%
TTGGAAGGATGAAACATCTA+AGG - chr4.2:80263167-80263186 MS.gene066670:CDS 35.0%
! AATGAACAGAATGTTGGTGA+TGG - chr4.2:80263595-80263614 MS.gene066670:intron 35.0%
! AGATTCCATCTAGTATTGGA+AGG - chr4.2:80263152-80263171 MS.gene066670:CDS 35.0%
! GAGTTGAATTTGATGGTTGT+TGG + chr4.2:80261586-80261605 None:intergenic 35.0%
! GGAATTGTTTAGAACTTGAC+AGG + chr4.2:80263099-80263118 None:intergenic 35.0%
! TTGGAGACTCTTTTACTCAA+TGG - chr4.2:80263256-80263275 MS.gene066670:CDS 35.0%
! TTGTTTAGAACTTGACAGGA+TGG + chr4.2:80263095-80263114 None:intergenic 35.0%
!! TAAGCATTGAGAAGAGAAGT+TGG + chr4.2:80263013-80263032 None:intergenic 35.0%
!!! TGTCTCTTTTGGCTTTGAAT+TGG - chr4.2:80262970-80262989 MS.gene066670:CDS 35.0%
AAGGCGAGGCAAATTATACA+TGG + chr4.2:80263815-80263834 None:intergenic 40.0%
AATGTATTGCATGCAGAAGG+AGG - chr4.2:80262523-80262542 MS.gene066670:CDS 40.0%
AGAATTGAGGCCCTTAATGT+TGG - chr4.2:80261795-80261814 MS.gene066670:CDS 40.0%
AGCGAAGAAGAAATCTCAAG+GGG - chr4.2:80263943-80263962 MS.gene066670:intron 40.0%
AGTGCTAAAGCTAGTGAACT+AGG - chr4.2:80263445-80263464 MS.gene066670:CDS 40.0%
CAACCATCTCACTACAAGAA+AGG + chr4.2:80263201-80263220 None:intergenic 40.0%
CAACCATCTTCATCATTGCA+CGG + chr4.2:80264228-80264247 None:intergenic 40.0%
CACAACACACATATATCAGG+AGG - chr4.2:80264034-80264053 MS.gene066670:intron 40.0%
CTCCTGATATATGTGTGTTG+TGG + chr4.2:80264036-80264055 None:intergenic 40.0%
CTTGGATGACAATTGGAATG+AGG - chr4.2:80262220-80262239 MS.gene066670:CDS 40.0%
GAACTCCGCGAAAAAATTGA+AGG - chr4.2:80262179-80262198 MS.gene066670:CDS 40.0%
GAAGGAACGTTAACACTTTG+AGG + chr4.2:80264281-80264300 None:intergenic 40.0%
GAGGCAAATTATACATGGTG+AGG + chr4.2:80263810-80263829 None:intergenic 40.0%
GGAATGAGGATCGTGATATT+TGG - chr4.2:80262234-80262253 MS.gene066670:CDS 40.0%
GTAAGAAAAGAGAAGCTGGT+TGG + chr4.2:80261742-80261761 None:intergenic 40.0%
GTAGCGAAGAAGAAATCTCA+AGG - chr4.2:80263941-80263960 MS.gene066670:intron 40.0%
TAACTGCCTTGGAACATTTG+AGG - chr4.2:80263500-80263519 MS.gene066670:intron 40.0%
TAATTGGAATTGGAGGACTG+GGG - chr4.2:80261997-80262016 MS.gene066670:CDS 40.0%
TAGGGAAGTCACATCTTGAT+CGG - chr4.2:80263557-80263576 MS.gene066670:intron 40.0%
TGACAGAGAGCTAGATAATG+CGG - chr4.2:80262424-80262443 MS.gene066670:CDS 40.0%
TGACCTTTCTTGTAGTGAGA+TGG - chr4.2:80263195-80263214 MS.gene066670:CDS 40.0%
TGATATCAAAGATTGCCCGA+AGG - chr4.2:80264425-80264444 MS.gene066670:CDS 40.0%
TGCAGTTAAGATTCAGCACA+CGG + chr4.2:80263120-80263139 None:intergenic 40.0%
TGCTTGTCTTGGATGACAAT+TGG - chr4.2:80262213-80262232 MS.gene066670:CDS 40.0%
TGGTGTGACATTGTCTAGTT+CGG - chr4.2:80263702-80263721 MS.gene066670:CDS 40.0%
TTCTTGTAGTGAGATGGTTG+AGG - chr4.2:80263201-80263220 MS.gene066670:CDS 40.0%
TTTCTTTGCCAATTGACACC+AGG + chr4.2:80262451-80262470 None:intergenic 40.0%
! CAATTGATGACACTGCTGAA+AGG - chr4.2:80262260-80262279 MS.gene066670:CDS 40.0%
! GCTTTGAATTGGATTCTTCC+TGG - chr4.2:80262981-80263000 MS.gene066670:CDS 40.0%
! TGATTTGAAACTCGTTGCTC+AGG + chr4.2:80261852-80261871 None:intergenic 40.0%
!! CTTAGACATCTTGAGTTGGA+TGG - chr4.2:80263328-80263347 MS.gene066670:intron 40.0%
!! CTTTTTAGCCGTCTTGTTAC+TGG + chr4.2:80261697-80261716 None:intergenic 40.0%
AAAGCCAAAAGAGACATGGC+GGG + chr4.2:80262966-80262985 None:intergenic 45.0%
AAGAAGTGAGAAGGTTGCCA+AGG - chr4.2:80262316-80262335 MS.gene066670:CDS 45.0%
AAGAGAAGTTGGAACTTGCC+AGG + chr4.2:80263002-80263021 None:intergenic 45.0%
ACGACTTGTGATAACTGCCT+TGG - chr4.2:80263489-80263508 MS.gene066670:intron 45.0%
ACTTAGCTTCTATGCCGCAT+GGG - chr4.2:80263359-80263378 MS.gene066670:intron 45.0%
AGATGATCTTGACAAGCTGG+TGG - chr4.2:80261506-80261525 MS.gene066670:CDS 45.0%
ATTGCATGCAGAAGGAGGAT+TGG - chr4.2:80262528-80262547 MS.gene066670:CDS 45.0%
CAAAACCACAGCCTTGATCT+CGG + chr4.2:80261541-80261560 None:intergenic 45.0%
CAAAGCCAAAAGAGACATGG+CGG + chr4.2:80262967-80262986 None:intergenic 45.0%
CCAGCCAGAGTTGAATTTGA+TGG + chr4.2:80261593-80261612 None:intergenic 45.0%
CCATCAAATTCAACTCTGGC+TGG - chr4.2:80261590-80261609 MS.gene066670:CDS 45.0%
GAGAGATGATCTTGACAAGC+TGG - chr4.2:80261503-80261522 MS.gene066670:CDS 45.0%
GAGAGTTGCCCAAAGATCTT+TGG - chr4.2:80263293-80263312 MS.gene066670:intron 45.0%
GATCCGTGCAATGATGAAGA+TGG - chr4.2:80264222-80264241 MS.gene066670:CDS 45.0%
GCAATGCCTCAAATGTTCCA+AGG + chr4.2:80263509-80263528 None:intergenic 45.0%
GCTAAAGCTAGTGAACTAGG+AGG - chr4.2:80263448-80263467 MS.gene066670:CDS 45.0%
GGACAATATGTCCGAGATCA+AGG - chr4.2:80261527-80261546 MS.gene066670:CDS 45.0%
GGTGATGACCAGTAACAAGA+CGG - chr4.2:80261686-80261705 MS.gene066670:CDS 45.0%
GTCATCTTTCCTATCCCATG+CGG + chr4.2:80263376-80263395 None:intergenic 45.0%
TATCACCGCAAGAAGTGAGA+AGG - chr4.2:80262307-80262326 MS.gene066670:CDS 45.0%
TGCAGTGATGTTACCCATTC+AGG + chr4.2:80264399-80264418 None:intergenic 45.0%
! AGAAGATGTACCACTAGCCT+TGG + chr4.2:80262336-80262355 None:intergenic 45.0%
! GCCCAAAGATCTTTGGAAGT+TGG - chr4.2:80263300-80263319 MS.gene066670:intron 45.0%
! GGGTTTGTTTGTCGATATGC+TGG + chr4.2:80262946-80262965 None:intergenic 45.0%
! TTGATGACACTGCTGAAAGG+AGG - chr4.2:80262263-80262282 MS.gene066670:CDS 45.0%
!! ATTCGGCTTTGGATTGCACA+TGG - chr4.2:80262716-80262735 MS.gene066670:CDS 45.0%
!! TTCGGCTTTGGATTGCACAT+GGG - chr4.2:80262717-80262736 MS.gene066670:CDS 45.0%
ACATGTCGAGACGGTACCTT+CGG + chr4.2:80264444-80264463 None:intergenic 50.0%
AGAGCTAGATAATGCGGACC+TGG - chr4.2:80262430-80262449 MS.gene066670:CDS 50.0%
CAGGAGGGTAGTGCTTTCAT+GGG - chr4.2:80264050-80264069 MS.gene066670:intron 50.0%
CCAATGCTTCTAATGGCGAG+TGG + chr4.2:80262497-80262516 None:intergenic 50.0%
CTGCTGAAAGGAGGAGCAAA+AGG - chr4.2:80262272-80262291 MS.gene066670:CDS 50.0%
GACTTAGCTTCTATGCCGCA+TGG - chr4.2:80263358-80263377 MS.gene066670:intron 50.0%
GGCAACCTTCTCACTTCTTG+CGG + chr4.2:80262315-80262334 None:intergenic 50.0%
TATGTCCGAGATCAAGGCTG+TGG - chr4.2:80261533-80261552 MS.gene066670:CDS 50.0%
TCAGGAGGGTAGTGCTTTCA+TGG - chr4.2:80264049-80264068 MS.gene066670:intron 50.0%
! AATGCGGACCTGGTGTCAAT+TGG - chr4.2:80262440-80262459 MS.gene066670:CDS 50.0%
! AGGTACCGTCTCGACATGTA+GGG - chr4.2:80264445-80264464 MS.gene066670:CDS 50.0%
! CAAACCCGCCATGTCTCTTT+TGG - chr4.2:80262959-80262978 MS.gene066670:CDS 50.0%
! CCACTCGCCATTAGAAGCAT+TGG - chr4.2:80262494-80262513 MS.gene066670:CDS 50.0%
! CGAGATCAAGGCTGTGGTTT+TGG - chr4.2:80261539-80261558 MS.gene066670:CDS 50.0%
!! AAGGTACCGTCTCGACATGT+AGG - chr4.2:80264444-80264463 MS.gene066670:CDS 50.0%
AGATGGTTGAGGAGCTCCCA+AGG - chr4.2:80263212-80263231 MS.gene066670:CDS 55.0%
CACTGAAGACTTGAGGCGAC+AGG - chr4.2:80261665-80261684 MS.gene066670:CDS 55.0%
CATGTCGAGACGGTACCTTC+GGG + chr4.2:80264443-80264462 None:intergenic 55.0%
GAGAAGGTTGCCAAGGCTAG+TGG - chr4.2:80262323-80262342 MS.gene066670:CDS 55.0%
GCTTCTATGCCGCATGGGAT+AGG - chr4.2:80263364-80263383 MS.gene066670:intron 55.0%
GGTACCGTCTCGACATGTAG+GGG - chr4.2:80264446-80264465 MS.gene066670:CDS 55.0%
GTAATGTGCTGAAGCCCCTC+AGG + chr4.2:80264327-80264346 None:intergenic 55.0%
TCCACCCCTACATGTCGAGA+CGG + chr4.2:80264453-80264472 None:intergenic 55.0%
TTGGATGCAGAGGAGCAGCA+GGG - chr4.2:80261558-80261577 MS.gene066670:CDS 55.0%
TTTGGATGCAGAGGAGCAGC+AGG - chr4.2:80261557-80261576 MS.gene066670:CDS 55.0%
!!! GGCTGTGGTTTTGGATGCAG+AGG - chr4.2:80261548-80261567 MS.gene066670:CDS 55.0%
ACCGTCTCGACATGTAGGGG+TGG - chr4.2:80264449-80264468 MS.gene066670:CDS 60.0%


Chromosome Type Strat End Strand Name
chr4.2 gene 80261501 80264482 80261501 ID=MS.gene066670
chr4.2 mRNA 80261501 80264482 80261501 ID=MS.gene066670.t1;Parent=MS.gene066670
chr4.2 exon 80264167 80264482 80264167 ID=MS.gene066670.t1.exon1;Parent=MS.gene066670.t1
chr4.2 CDS 80264167 80264482 80264167 ID=cds.MS.gene066670.t1;Parent=MS.gene066670.t1
chr4.2 exon 80263639 80263863 80263639 ID=MS.gene066670.t1.exon2;Parent=MS.gene066670.t1
chr4.2 CDS 80263639 80263863 80263639 ID=cds.MS.gene066670.t1;Parent=MS.gene066670.t1
chr4.2 exon 80263390 80263494 80263390 ID=MS.gene066670.t1.exon3;Parent=MS.gene066670.t1
chr4.2 CDS 80263390 80263494 80263390 ID=cds.MS.gene066670.t1;Parent=MS.gene066670.t1
chr4.2 exon 80261501 80263293 80261501 ID=MS.gene066670.t1.exon4;Parent=MS.gene066670.t1
chr4.2 CDS 80261501 80263293 80261501 ID=cds.MS.gene066670.t1;Parent=MS.gene066670.t1
Gene Sequence

>MS.gene066670

ATGAGAGATGATCTTGACAAGCTGGTGGACAATATGTCCGAGATCAAGGCTGTGGTTTTGGATGCAGAGGAGCAGCAGGGCACCAACAACCATCAAATTCAACTCTGGCTGGAAAAGCTCAAAGATGCTCTTGATGATGCTGATGACTTGCTTGATGACTTTAACACTGAAGACTTGAGGCGACAGGTGATGACCAGTAACAAGACGGCTAAAAAGTTTCACATCTTCTTCTCATCATCCAACCAGCTTCTCTTTTCTTACAAAATGGTTCAGAAAATTAAAGAACTTAGTAAGAGAATTGAGGCCCTTAATGTTGGTCAGAGAAGATTTAATTTCACAAATCGCACTCCTGAGCAACGAGTTTCAAATCAAAGAGAAACTCATTCCTTTATTCGTGACGAAGAAGTTATTGGAAGAGAAGAGGAGAAGAAAGAGTTGATAGAGTTGTTGTTTAACACCGGCAACAATGTGAAAGAGAATGTTTCAGTTATTTCTATAATTGGAATTGGAGGACTGGGGAAAACTGCGCTTGCTCAACTTGTATACAATGACAAAGAAGTGCAGCAACATTTTGAGTTGAAAAAATGGGTTTGTGTTTCTGATGATTTTGATGTAAAAGGTATTGCTTCAAAAATCATAGAATCTCAAACAAATGTTGAGATGGATAAAGTGCAATCGGAACTCCGCGAAAAAATTGAAGGAAGAAGATATTTGCTTGTCTTGGATGACAATTGGAATGAGGATCGTGATATTTGGCTTCAATTGATGACACTGCTGAAAGGAGGAGCAAAAGGAAGTAAAGTAATTATCACCGCAAGAAGTGAGAAGGTTGCCAAGGCTAGTGGTACATCTTCTATCTTCAATTTAAAGGGTCTTGATGAAAAACAATCTTGGAGATTATTCAGTCAACTAGCTTTTGAGAATGACAGAGAGCTAGATAATGCGGACCTGGTGTCAATTGGCAAAGAAATTGTGAAGTAATGTTCAGGGGTTCCACTCGCCATTAGAAGCATTGGAAGCTTAATGTATTGCATGCAGAAGGAGGATTGGTCAACATTCAAGAACAAAGATCTAATGAAAATTGATGAACAAGGTGATAATAAAATTTTACAGCTTATCAAACTAAGTTATGATCATCTACCATATCATTTGAAGAAGTGCTTTGCATTTTGTTCATTGTTTCCAAAAGACTATTTCATTAGCAAAACAATATTGATTCGGCTTTGGATTGCACATGGGTTTGTTCAGTCATCAGATGAAAGTACAAGTTTAGAAGATATTGGTGATATGTACTTCATGGATTTAGTTCATAAATCTTTCTTTCAAAATATCACTGTAAATCTTCTATCTGTTGACAGTGTAGATTTCCAAATGCATGATATTGTACATGATCTGGCTAGTTTTATTTCAAGAAATGATTATCTTTTAGTTAATAAAAAGGGCCAGCATATCGACAAACAAACCCGCCATGTCTCTTTTGGCTTTGAATTGGATTCTTCCTGGCAAGTTCCAACTTCTCTTCTCAATGCTTACAAATTAAGGACATTTCTATTATATAGAGAAAGTCTATTAGAATTGTCTGCTTGTAATTCCATCCTGTCAAGTTCTAAACAATTCCGTGTGCTGAATCTTAACTGCATAAATTCAAGGAAGATTCCATCTAGTATTGGAAGGATGAAACATCTAAGGTATCTTGACCTTTCTTGTAGTGAGATGGTTGAGGAGCTCCCAAGGTCTATAACTGAGTTAGTTAACTTGGAGACTCTTTTACTCAATGGTTGTTCTAAATTGAGAGAGTTGCCCAAAGATCTTTGGAAGTTGGTAAGTCTTAGACATCTTGAGTTGGATGGTTGTGATGACTTAGCTTCTATGCCGCATGGGATAGGAAAGATGACTAATCTTCAAACACTGACACAATTTGTGGTAGATACGACTTCTAAAGATAGTGCTAAAGCTAGTGAACTAGGAGGATTACATAATTTGAGGGGACGACTTGTGATAACTGCCTTGGAACATTTGAGGCATTGCCCAACAGAAGCTAAGCATATGAATTTAATAGGGAAGTCACATCTTGATCGGTTATTATTGGAATGGAATGAACAGAATGTTGGTGATGGCAATGAGTTTGAAAAGGATGAAATAATTCTACATGACATTCTTCTACAGTCCAATATCAAGGCATTAACAATAAATGGATTTGGTGGTGTGACATTGTCTAGTTCGGTCAATTTAAATTTGGTTGAATTGAGCTTAAACAATTGCAACAAATTGCAATATTTCGAACTCTCACTGTTGCATGTCAAAGTCCTCACCATGTATAATTTGCCTCGCCTTAAGTACATATTCAATGATAACAATAGTGATAACTCATCATCATTTTGTGCGTCACTTACAAATATACAACTTGATGAGTTAGCAAATCTGAAAGGATGGTGTAACTGTAGCGAAGAAGAAATCTCAAGGGGTTGTTGTCATCAGTTTCAGAGTCTTGAATACTTATCGATTGATTATGGTCATAATCTAGTTTCAATTCCACAACACACATATATCAGGAGGGTAGTGCTTTCATGGGTCAAAGAGAAGATATTACAGCAAGCGGTCAATGATTCCAAAGTAGAGTATCTTCAGATAACTCACATATTCAATTTTAAATCTCTCAGTGGAATCTTTCAACATCTAAGTACACTGTCTGAATTGTATATCTTCAATTGCGAAATGTTTGATCCGTGCAATGATGAAGATGGTTGTTACAGCATGAAATGGAAAGAACTCTCGAACCTCAAAGTGTTAACGTTCCTTCAAATCCCAAAAATGAAAGATTTACCTGAGGGGCTTCAGCACATTACCACTTTACAGACTTTAAGAATTGAAGAATGTGTGAATCTTACATCTATACCTGAATGGGTAACATCACTGCAAGTTTTTGATATCAAAGATTGCCCGAAGGTACCGTCTCGACATGTAGGGGTGGAAGATCAATAG
Protein sequence

>MS.gene066670.t1

MRDDLDKLVDNMSEIKAVVLDAEEQQGTNNHQIQLWLEKLKDALDDADDLLDDFNTEDLRRQVMTSNKTAKKFHIFFSSSNQLLFSYKMVQKIKELSKRIEALNVGIASKIIESQTNVEMDKVQSELREKIEGRRYLLVLDDNWNEDRDIWLQLMTLLKGGAKGSKVIITARSEKVAKASGVPLAIRSIGSLMYCMQKEDWSTFKNKDLMKIDEQDYFISKTILIRLWIAHGFVQSSDESTSLEDIGDMYFMDLVHKSFFQNITVNLLSVDSVDFQMHDIVHDLASFISRNDYLLVNKKGQHIDKQTRHVSFGFELDSSWQVPTSLLNAYKLRTFLLYRESLLELSACNSILSSSKQFRVLNLNCINSRKIPSSIGRMKHLRYLDLSCSEMVEELPRSITELVNLETLLLNGCSKLRELPKDLWKLVSLRHLELDGCDDLASMPHGIGKMTNLQTLTQFVVDTTSKDSAKASELGGLHNLRGRLVITALEHLRHCPTEAKHMNLIGKSHLDRLLLEWNEQNVGDGNEFEKDEIILHDILLQSNIKALTINGFGGVTLSSSVNLNLVELSLNNCNKLQYFELSLLHVKVLTMYNLPRLKYIFNDNNSDNSSSFCASLTNIQLDELANLKGWCNCSEEEISRGCCHQFQSLEYLSIDYGHNLVSIPQHTYIRRVVLSWVKEKILQQAVNDSKVEYLQITHIFNFKSLSGIFQHLSTLSELYIFNCEMFDPCNDEDGCYSMKWKELSNLKVLTFLQIPKMKDLPEGLQHITTLQTLRIEECVNLTSIPEWVTSLQVFDIKDCPKVPSRHVGVEDQ