Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066975.t1 | XP_003619829.1 | 97 | 604 | 13 | 3 | 1 | 599 | 1 | 604 | 0.00E+00 | 1094 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066975.t1 | Q5SMQ9 | 70.8 | 619 | 137 | 10 | 1 | 599 | 1 | 595 | 1.1e-227 | 790.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066975.t1 | Q8GV74 | 97.0 | 604 | 13 | 3 | 1 | 599 | 1 | 604 | 0.0e+00 | 1094.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene066975 | MS.gene62984 | PPI |
| MS.gene83125 | MS.gene066975 | PPI |
| MS.gene066975 | MS.gene59137 | PPI |
| MS.gene066975 | MS.gene026602 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066975.t1 | MTR_6g069510 | 98.179 | 604 | 6 | 3 | 1 | 599 | 1 | 604 | 0.0 | 1211 |
| MS.gene066975.t1 | MTR_8g107360 | 72.712 | 601 | 85 | 10 | 1 | 599 | 1 | 524 | 0.0 | 832 |
| MS.gene066975.t1 | MTR_7g089360 | 67.773 | 633 | 128 | 14 | 1 | 599 | 1 | 591 | 0.0 | 805 |
| MS.gene066975.t1 | MTR_4g084870 | 63.189 | 671 | 163 | 15 | 1 | 599 | 1 | 659 | 0.0 | 784 |
| MS.gene066975.t1 | MTR_7g089360 | 66.184 | 621 | 134 | 14 | 1 | 587 | 1 | 579 | 0.0 | 768 |
| MS.gene066975.t1 | MTR_1g030890 | 63.422 | 637 | 179 | 10 | 1 | 599 | 1 | 621 | 0.0 | 757 |
| MS.gene066975.t1 | MTR_4g127100 | 59.748 | 636 | 208 | 10 | 1 | 599 | 1 | 625 | 0.0 | 717 |
| MS.gene066975.t1 | MTR_4g127090 | 54.984 | 622 | 202 | 8 | 1 | 599 | 1 | 567 | 0.0 | 631 |
| MS.gene066975.t1 | MTR_1g030890 | 59.294 | 538 | 165 | 10 | 1 | 500 | 1 | 522 | 0.0 | 581 |
| MS.gene066975.t1 | MTR_4g127100 | 55.636 | 550 | 174 | 11 | 1 | 502 | 1 | 528 | 0.0 | 550 |
| MS.gene066975.t1 | MTR_1g029190 | 49.175 | 606 | 222 | 11 | 1 | 599 | 1 | 527 | 1.45e-174 | 505 |
| MS.gene066975.t1 | MTR_2g038470 | 41.516 | 607 | 249 | 13 | 1 | 599 | 1 | 509 | 8.23e-149 | 439 |
| MS.gene066975.t1 | MTR_7g009370 | 56.915 | 188 | 70 | 2 | 412 | 599 | 181 | 357 | 2.93e-62 | 210 |
| MS.gene066975.t1 | MTR_7g009370 | 57.407 | 162 | 69 | 0 | 1 | 162 | 1 | 162 | 2.23e-55 | 191 |
| MS.gene066975.t1 | MTR_6g011400 | 49.289 | 211 | 98 | 1 | 398 | 599 | 151 | 361 | 2.26e-61 | 207 |
| MS.gene066975.t1 | MTR_6g011400 | 57.595 | 158 | 66 | 1 | 1 | 157 | 1 | 158 | 6.56e-54 | 187 |
| MS.gene066975.t1 | MTR_7g079720 | 42.857 | 210 | 111 | 2 | 388 | 597 | 159 | 359 | 6.97e-52 | 182 |
| MS.gene066975.t1 | MTR_7g079720 | 52.903 | 155 | 73 | 0 | 1 | 155 | 1 | 155 | 5.92e-49 | 174 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066975.t1 | AT1G73590 | 71.473 | 638 | 127 | 12 | 1 | 599 | 1 | 622 | 0.0 | 868 |
| MS.gene066975.t1 | AT1G23080 | 64.434 | 627 | 183 | 12 | 1 | 599 | 1 | 615 | 0.0 | 746 |
| MS.gene066975.t1 | AT1G23080 | 64.434 | 627 | 183 | 12 | 1 | 599 | 1 | 615 | 0.0 | 746 |
| MS.gene066975.t1 | AT1G23080 | 64.025 | 631 | 183 | 12 | 1 | 599 | 1 | 619 | 0.0 | 744 |
| MS.gene066975.t1 | AT2G01420 | 62.916 | 631 | 183 | 11 | 1 | 599 | 1 | 612 | 0.0 | 744 |
| MS.gene066975.t1 | AT2G01420 | 62.344 | 640 | 176 | 13 | 1 | 599 | 1 | 616 | 0.0 | 743 |
| MS.gene066975.t1 | AT1G70940 | 62.080 | 654 | 179 | 14 | 1 | 599 | 1 | 640 | 0.0 | 739 |
| MS.gene066975.t1 | AT5G57090 | 58.663 | 658 | 202 | 12 | 1 | 599 | 1 | 647 | 0.0 | 713 |
| MS.gene066975.t1 | AT1G23080 | 61.364 | 528 | 164 | 13 | 1 | 500 | 1 | 516 | 0.0 | 593 |
| MS.gene066975.t1 | AT2G01420 | 58.780 | 541 | 158 | 13 | 1 | 500 | 1 | 517 | 0.0 | 577 |
| MS.gene066975.t1 | AT5G57090 | 56.014 | 557 | 175 | 12 | 102 | 599 | 2 | 547 | 0.0 | 553 |
| MS.gene066975.t1 | AT1G77110 | 48.760 | 605 | 269 | 10 | 1 | 599 | 1 | 570 | 0.0 | 530 |
| MS.gene066975.t1 | AT1G77110 | 48.370 | 583 | 260 | 10 | 1 | 577 | 1 | 548 | 4.00e-172 | 500 |
| MS.gene066975.t1 | AT5G15100 | 62.195 | 164 | 62 | 0 | 436 | 599 | 204 | 367 | 2.83e-62 | 210 |
| MS.gene066975.t1 | AT5G15100 | 49.091 | 165 | 79 | 1 | 1 | 160 | 1 | 165 | 4.18e-44 | 161 |
| MS.gene066975.t1 | AT5G16530 | 54.777 | 157 | 71 | 0 | 1 | 157 | 1 | 157 | 6.32e-53 | 184 |
| MS.gene066975.t1 | AT5G16530 | 49.635 | 137 | 69 | 0 | 442 | 578 | 192 | 328 | 1.99e-41 | 153 |
| MS.gene066975.t1 | AT5G16530 | 54.777 | 157 | 71 | 0 | 1 | 157 | 1 | 157 | 2.04e-52 | 183 |
| MS.gene066975.t1 | AT5G16530 | 52.000 | 150 | 72 | 0 | 445 | 594 | 195 | 344 | 2.85e-49 | 175 |
Find 110 sgRNAs with CRISPR-Local
Find 252 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGGGAATTCCTTTACTTAA+AGG | 0.161203 | 6.4:+47674877 | MS.gene066975:CDS |
| TTTGAATTTCTTAGCATTAT+TGG | 0.179434 | 6.4:-47675433 | None:intergenic |
| TCTTGTGTACTACATCTTAA+TGG | 0.199474 | 6.4:+47679154 | MS.gene066975:CDS |
| GACTAGGCTTATATTGATTA+TGG | 0.205854 | 6.4:+47676200 | MS.gene066975:CDS |
| AACACTTACTCTAGCTTAAT+TGG | 0.219273 | 6.4:+47676249 | MS.gene066975:CDS |
| TCTTATTTCTTCTTGCTATA+TGG | 0.220059 | 6.4:+47674776 | MS.gene066975:CDS |
| AATGATGTTGTTAATAATTA+TGG | 0.220789 | 6.4:+47675354 | MS.gene066975:CDS |
| CTTGGTCTTTGGTTTCATTC+AGG | 0.226095 | 6.4:+47676277 | MS.gene066975:CDS |
| AATTGGTCTCACTTGGTCTT+TGG | 0.247229 | 6.4:+47676266 | MS.gene066975:CDS |
| CTTCCAAACACTTTGGTTAT+GGG | 0.260587 | 6.4:+47674859 | MS.gene066975:CDS |
| ACTTCCAAACACTTTGGTTA+TGG | 0.265129 | 6.4:+47674858 | MS.gene066975:CDS |
| AGACACTCAAGAGGACTATT+TGG | 0.274169 | 6.4:+47676062 | MS.gene066975:CDS |
| CTTTCATGTTGCCGTTGTTC+AGG | 0.282706 | 6.4:+47677887 | MS.gene066975:CDS |
| GTAGCTATGATCTTAGCTTA+TGG | 0.302571 | 6.4:+47674586 | MS.gene066975:CDS |
| CTTGTGTACTACATCTTAAT+GGG | 0.304181 | 6.4:+47679155 | MS.gene066975:CDS |
| CACCCTGTGCTTAGAATATC+AGG | 0.308657 | 6.4:-47678991 | None:intergenic |
| CCATTCTAAACAACCCCTTT+TGG | 0.316887 | 6.4:-47674809 | None:intergenic |
| TTTGTAGGAGAAAACATTCC+TGG | 0.335718 | 6.4:-47675474 | None:intergenic |
| AAGATCTTCATATGTTTGTT+TGG | 0.346836 | 6.4:+47675574 | MS.gene066975:CDS |
| ATTAAGCTAGAGTAAGTGTT+TGG | 0.363628 | 6.4:-47676246 | None:intergenic |
| TAGCTTATGGATCAGTAAAA+TGG | 0.367227 | 6.4:+47674599 | MS.gene066975:CDS |
| CCAAAAGGGGTTGTTTAGAA+TGG | 0.369590 | 6.4:+47674809 | MS.gene066975:CDS |
| GGAAATAGACTTTGCTATAA+TGG | 0.370605 | 6.4:-47676484 | None:intergenic |
| GGCTTATATTGATTATGGTT+TGG | 0.374310 | 6.4:+47676205 | MS.gene066975:CDS |
| ATTCCCATAACCAAAGTGTT+TGG | 0.375667 | 6.4:-47674862 | None:intergenic |
| TCTTCATAATTAGAAGGTCT+TGG | 0.376111 | 6.4:-47675405 | None:intergenic |
| CCTTTACTTAAAGGAATGTA+TGG | 0.377284 | 6.4:+47674886 | MS.gene066975:CDS |
| GAGAAAGATGAATTCAGCTT+TGG | 0.386961 | 6.4:+47676084 | MS.gene066975:CDS |
| TCAGCATTAGTAAGATTAGA+AGG | 0.389801 | 6.4:-47675222 | None:intergenic |
| GCTTCTTCTTCATAATTAGA+AGG | 0.394539 | 6.4:-47675411 | None:intergenic |
| AAGTCCTGCATCTGACAGTA+TGG | 0.396661 | 6.4:-47676505 | None:intergenic |
| TTAGTAAGATTAGAAGGTCT+TGG | 0.397425 | 6.4:-47675216 | None:intergenic |
| GGAGAAAACATTCCTGGATT+AGG | 0.399766 | 6.4:-47675468 | None:intergenic |
| TTGTTCTTCAATGTATCATT+TGG | 0.400452 | 6.4:+47674941 | MS.gene066975:CDS |
| TCACCTGTCTCTGATGTGTT+TGG | 0.400913 | 6.4:+47675609 | MS.gene066975:CDS |
| GCAGCTGCTTCATTTGCTGT+TGG | 0.404122 | 6.4:+47677849 | MS.gene066975:CDS |
| ATGTAGTACACAAGAGTAAT+GGG | 0.415483 | 6.4:-47679146 | None:intergenic |
| TATTCCTTAGCAAAGACAAA+TGG | 0.416542 | 6.4:-47678958 | None:intergenic |
| ATGGAGCAATTTCTCCAAAA+GGG | 0.423793 | 6.4:+47674795 | MS.gene066975:CDS |
| CTAGCTTAATTGGTCTCACT+TGG | 0.425011 | 6.4:+47676259 | MS.gene066975:CDS |
| ATCCTTACAAAATGAACCTT+AGG | 0.436200 | 6.4:+47674719 | MS.gene066975:CDS |
| CCTTGTTGGTCCAGCTGTCA+TGG | 0.441793 | 6.4:+47677827 | MS.gene066975:CDS |
| TCATTTGCTGTTGGACTCAA+AGG | 0.446394 | 6.4:+47677858 | MS.gene066975:CDS |
| GAACAGTTTCCTGACACTGC+TGG | 0.447998 | 6.4:+47675018 | MS.gene066975:CDS |
| CCATACATTCCTTTAAGTAA+AGG | 0.457088 | 6.4:-47674886 | None:intergenic |
| GATTGTTTGATGCTATGAAA+TGG | 0.458601 | 6.4:-47674699 | None:intergenic |
| CTCAACACTTCCAAACACTT+TGG | 0.468618 | 6.4:+47674852 | MS.gene066975:CDS |
| TATGGAGCAATTTCTCCAAA+AGG | 0.468730 | 6.4:+47674794 | MS.gene066975:CDS |
| TGATTCTGATGTCATGTCAT+TGG | 0.471853 | 6.4:+47675062 | MS.gene066975:CDS |
| CCTGTCTCTGATGTGTTTGG+TGG | 0.474026 | 6.4:+47675612 | MS.gene066975:CDS |
| TTGATTCCTGAACATTGATC+AGG | 0.476336 | 6.4:-47674637 | None:intergenic |
| AAACTAGAACCTCTAGGAGT+AGG | 0.476890 | 6.4:-47675273 | None:intergenic |
| AACTAGAACCTCTAGGAGTA+GGG | 0.482673 | 6.4:-47675272 | None:intergenic |
| GAATTCAGCTTTGGTAATAG+AGG | 0.484834 | 6.4:+47676093 | MS.gene066975:CDS |
| GAAGCAGCTGCCATGACAGC+TGG | 0.484986 | 6.4:-47677837 | None:intergenic |
| GGTGGAAGAAACTCAAACTT+TGG | 0.486326 | 6.4:+47675327 | MS.gene066975:CDS |
| ATTCCTTAGCAAAGACAAAT+GGG | 0.487126 | 6.4:-47678957 | None:intergenic |
| CAACATGAAGGTGGTGAGAA+AGG | 0.488878 | 6.4:+47676135 | MS.gene066975:CDS |
| AACTATCCTGCACCTAATCC+AGG | 0.489266 | 6.4:+47675456 | MS.gene066975:CDS |
| ACAATGGAACCAGCAGTGTC+AGG | 0.491234 | 6.4:-47675027 | None:intergenic |
| ATGGGTGTGAGATTCCTTGT+TGG | 0.493337 | 6.4:+47677813 | MS.gene066975:CDS |
| ATACTGTCAGATGCAGGACT+TGG | 0.497015 | 6.4:+47676507 | MS.gene066975:CDS |
| TGTCCCATTTGTCTTTGCTA+AGG | 0.502481 | 6.4:+47678954 | MS.gene066975:CDS |
| GGCATGGCTATGTTCAGTCT+TGG | 0.502767 | 6.4:+47676528 | MS.gene066975:CDS |
| GATGTAGTACACAAGAGTAA+TGG | 0.503834 | 6.4:-47679147 | None:intergenic |
| AACATTCCTGGATTAGGTGC+AGG | 0.504642 | 6.4:-47675462 | None:intergenic |
| CATCCTGATATTCTAAGCAC+AGG | 0.506231 | 6.4:+47678988 | MS.gene066975:CDS |
| AGCCTAGTCATCACACTAGC+TGG | 0.508803 | 6.4:-47676186 | None:intergenic |
| GTTAAGTTGAATGTGTCTCC+TGG | 0.512083 | 6.4:+47675666 | MS.gene066975:CDS |
| AAGATCATAGCTACATAAAG+TGG | 0.519198 | 6.4:-47674577 | None:intergenic |
| GATGCTGAAATCAAAGAAGA+TGG | 0.521178 | 6.4:+47675108 | MS.gene066975:CDS |
| ATAGACTTTGCTATAATGGC+AGG | 0.526481 | 6.4:-47676480 | None:intergenic |
| ATCAACATGGATTGAAACAA+TGG | 0.535163 | 6.4:-47675043 | None:intergenic |
| TTGAATGTGTCTCCTGGAAA+AGG | 0.537666 | 6.4:+47675672 | MS.gene066975:CDS |
| GTGTTTGGTGGACATGACTT+TGG | 0.541105 | 6.4:+47675624 | MS.gene066975:CDS |
| ATTTCCATACTGTCAGATGC+AGG | 0.544656 | 6.4:+47676501 | MS.gene066975:CDS |
| CAGCTTTGGTAATAGAGGAA+TGG | 0.545118 | 6.4:+47676098 | MS.gene066975:CDS |
| ATTGGATGGTAGAACACCAT+TGG | 0.552263 | 6.4:+47675080 | MS.gene066975:CDS |
| ATTTCAGCATCAGTTTCCAA+TGG | 0.555165 | 6.4:-47675096 | None:intergenic |
| CAGCAAAGAGTGCAACAAAA+CGG | 0.557146 | 6.4:-47674660 | None:intergenic |
| CACCAGCTAGTGTGATGACT+AGG | 0.560308 | 6.4:+47676184 | MS.gene066975:CDS |
| GGTTTATCTGCTAATTCAAG+AGG | 0.560784 | 6.4:+47675375 | MS.gene066975:CDS |
| GGTGGTGAGAAAGGTGGAGA+TGG | 0.565305 | 6.4:+47676144 | MS.gene066975:CDS |
| GTTAATGCTAAGAAGAGTAA+TGG | 0.571263 | 6.4:+47675531 | MS.gene066975:CDS |
| CCACCAAACACATCAGAGAC+AGG | 0.575955 | 6.4:-47675612 | None:intergenic |
| TGGTAATAGAGGAATGGAAA+GGG | 0.578501 | 6.4:+47676104 | MS.gene066975:CDS |
| CTTATGGATCAGTAAAATGG+TGG | 0.591247 | 6.4:+47674602 | MS.gene066975:CDS |
| TTGGTAATAGAGGAATGGAA+AGG | 0.591523 | 6.4:+47676103 | MS.gene066975:CDS |
| TGGAGCAATTTCTCCAAAAG+GGG | 0.592702 | 6.4:+47674796 | MS.gene066975:CDS |
| TGATTAAAACTAGAACCTCT+AGG | 0.595193 | 6.4:-47675279 | None:intergenic |
| CATGAAGGTGGTGAGAAAGG+TGG | 0.607207 | 6.4:+47676138 | MS.gene066975:CDS |
| ATGAAATGGAATGAAAGAAG+TGG | 0.614917 | 6.4:-47674685 | None:intergenic |
| GTCAGATGCAGGACTTGGCA+TGG | 0.620374 | 6.4:+47676512 | MS.gene066975:CDS |
| TGTTTGAGTTTAGAGGAGCA+AGG | 0.624922 | 6.4:+47674983 | MS.gene066975:CDS |
| CAACAGGCAGCTCTTCCACA+AGG | 0.629681 | 6.4:+47678928 | MS.gene066975:intron |
| AGGGAAATGAATCAACATGA+AGG | 0.630340 | 6.4:+47676123 | MS.gene066975:CDS |
| CCATGACAGCTGGACCAACA+AGG | 0.634447 | 6.4:-47677827 | None:intergenic |
| TCTGATGTCATGTCATTGGA+TGG | 0.636707 | 6.4:+47675066 | MS.gene066975:CDS |
| TCAAGAAACCCTACTCCTAG+AGG | 0.654645 | 6.4:+47675264 | MS.gene066975:CDS |
| GAAATGAATCAACATGAAGG+TGG | 0.659006 | 6.4:+47676126 | MS.gene066975:CDS |
| CTACCATGTCATGACAGCAA+TGG | 0.661376 | 6.4:+47674552 | MS.gene066975:CDS |
| CTAGTCATCACACTAGCTGG+TGG | 0.661660 | 6.4:-47676183 | None:intergenic |
| ACATGACATCAGAATCAACA+TGG | 0.668465 | 6.4:-47675056 | None:intergenic |
| ACAAATGGGACAATTCCTTG+TGG | 0.669772 | 6.4:-47678943 | None:intergenic |
| GCACCATTGCTGTCATGACA+TGG | 0.674152 | 6.4:-47674555 | None:intergenic |
| ATCCTGATATTCTAAGCACA+GGG | 0.676564 | 6.4:+47678989 | MS.gene066975:CDS |
| AAGAAACAAGACCTGAACAA+CGG | 0.677067 | 6.4:-47677898 | None:intergenic |
| TTGTGTACTACATCTTAATG+GGG | 0.695067 | 6.4:+47679156 | MS.gene066975:CDS |
| GGGTCATAGAGACACTCAAG+AGG | 0.695679 | 6.4:+47676053 | MS.gene066975:CDS |
| ATTTACTCGAGAAGATCACA+AGG | 0.714642 | 6.4:+47675177 | MS.gene066975:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGTTATCATAAAATTTAAA+AGG | - | chr6.4:47677570-47677589 | None:intergenic | 10.0% |
| !! | AGTTATCATAAAATTTAAAA+GGG | - | chr6.4:47677569-47677588 | None:intergenic | 10.0% |
| !! | CTTCATATAAATATATATTT+GGG | - | chr6.4:47678434-47678453 | None:intergenic | 10.0% |
| !! | TCTTAAAAACTATAATATTA+TGG | + | chr6.4:47678644-47678663 | MS.gene066975:intron | 10.0% |
| !! | TCTTCATATAAATATATATT+TGG | - | chr6.4:47678435-47678454 | None:intergenic | 10.0% |
| !!! | AATTACCATTAAAATTTTAT+AGG | + | chr6.4:47678675-47678694 | MS.gene066975:intron | 10.0% |
| !!! | ATTACCATTAAAATTTTATA+GGG | + | chr6.4:47678676-47678695 | MS.gene066975:intron | 10.0% |
| !! | AAATTGAAGTAAAATAATGA+AGG | - | chr6.4:47679050-47679069 | None:intergenic | 15.0% |
| !! | AACAATTATCAAAATTAGAA+AGG | - | chr6.4:47676715-47676734 | None:intergenic | 15.0% |
| !! | AATGATGTTGTTAATAATTA+TGG | + | chr6.4:47675354-47675373 | MS.gene066975:CDS | 15.0% |
| !! | AATTGAAGTAAAATAATGAA+GGG | - | chr6.4:47679049-47679068 | None:intergenic | 15.0% |
| !! | ATGTAAAAAATCAAACTTTA+AGG | - | chr6.4:47675983-47676002 | None:intergenic | 15.0% |
| !! | TCAATTAGTTATTTAAAAAG+TGG | + | chr6.4:47678224-47678243 | MS.gene066975:intron | 15.0% |
| !!! | AAAAAAGAAATAATTTTCAG+TGG | + | chr6.4:47678096-47678115 | MS.gene066975:intron | 15.0% |
| !!! | CAAAAATCATATTTGATAAT+TGG | + | chr6.4:47677104-47677123 | MS.gene066975:intron | 15.0% |
| !!! | CTTTTTTAAATATGAATTGT+TGG | - | chr6.4:47678198-47678217 | None:intergenic | 15.0% |
| !!! | TATTAGTTTGATTTTTATGT+TGG | + | chr6.4:47676002-47676021 | MS.gene066975:intron | 15.0% |
| !!! | TCCTTATTTACATTTTTATA+GGG | + | chr6.4:47678561-47678580 | MS.gene066975:intron | 15.0% |
| !! | AACAATAAACTAACTTATCT+TGG | - | chr6.4:47678067-47678086 | None:intergenic | 20.0% |
| !! | AAGTAAATTAAAAAAAGGAG+AGG | - | chr6.4:47677995-47678014 | None:intergenic | 20.0% |
| !! | AATTTGACTCTATAATCTTA+AGG | - | chr6.4:47678297-47678316 | None:intergenic | 20.0% |
| !! | ACAATAAACTAACTTATCTT+GGG | - | chr6.4:47678066-47678085 | None:intergenic | 20.0% |
| !! | ACCGATAATGAAAATAATTA+AGG | - | chr6.4:47678747-47678766 | None:intergenic | 20.0% |
| !! | ATTGTAATGGTTATGTTAAA+AGG | - | chr6.4:47677946-47677965 | None:intergenic | 20.0% |
| !! | ATTTGACTCTATAATCTTAA+GGG | - | chr6.4:47678296-47678315 | None:intergenic | 20.0% |
| !! | CAAACTATAATCAATCAAAA+TGG | - | chr6.4:47676424-47676443 | None:intergenic | 20.0% |
| !! | CCGATAATGAAAATAATTAA+GGG | - | chr6.4:47678746-47678765 | None:intergenic | 20.0% |
| !! | TCAAATTTCAACATATTTAG+AGG | - | chr6.4:47676946-47676965 | None:intergenic | 20.0% |
| !! | TCCCTATAAAAATGTAAATA+AGG | - | chr6.4:47678565-47678584 | None:intergenic | 20.0% |
| !! | TTAAATAAGAGAATTCTAAG+AGG | + | chr6.4:47675957-47675976 | MS.gene066975:intron | 20.0% |
| !! | TTGTAATGGTTATGTTAAAA+GGG | - | chr6.4:47677945-47677964 | None:intergenic | 20.0% |
| !! | TTTGAATTTCTTAGCATTAT+TGG | - | chr6.4:47675436-47675455 | None:intergenic | 20.0% |
| !!! | AAAAACTATTTTCATATGCA+AGG | - | chr6.4:47675883-47675902 | None:intergenic | 20.0% |
| !!! | AAGACATAGTTTCTTTTTTT+GGG | + | chr6.4:47677505-47677524 | MS.gene066975:intron | 20.0% |
| !!! | AATCTTTTTTCACTCTTTTA+AGG | + | chr6.4:47676870-47676889 | MS.gene066975:intron | 20.0% |
| !!! | ACTGATTTTTATTCTATGAT+GGG | + | chr6.4:47675303-47675322 | MS.gene066975:CDS | 20.0% |
| !!! | AGCATTTTCCAATTTAAAAT+AGG | - | chr6.4:47677384-47677403 | None:intergenic | 20.0% |
| !!! | CATTTTGATTGATTATAGTT+TGG | + | chr6.4:47676422-47676441 | MS.gene066975:intron | 20.0% |
| !!! | CATTTTTATAGGGATTATTT+TGG | + | chr6.4:47678571-47678590 | MS.gene066975:intron | 20.0% |
| !!! | CCCTTAATTATTTTCATTAT+CGG | + | chr6.4:47678743-47678762 | MS.gene066975:intron | 20.0% |
| !!! | GAAAACTTTTTACCAAAAAT+TGG | - | chr6.4:47678610-47678629 | None:intergenic | 20.0% |
| !!! | GGTAAAAAGTTTTCAAAATA+AGG | + | chr6.4:47678616-47678635 | MS.gene066975:intron | 20.0% |
| !!! | GTCCTTATTTACATTTTTAT+AGG | + | chr6.4:47678560-47678579 | MS.gene066975:intron | 20.0% |
| !!! | TACTGATTTTTATTCTATGA+TGG | + | chr6.4:47675302-47675321 | MS.gene066975:CDS | 20.0% |
| !!! | TAGAAACTTGTAATTTTGTA+GGG | - | chr6.4:47678506-47678525 | None:intergenic | 20.0% |
| !!! | TCTTTACTCCTATTTTAAAT+TGG | + | chr6.4:47677373-47677392 | MS.gene066975:intron | 20.0% |
| !!! | TTAGAAACTTGTAATTTTGT+AGG | - | chr6.4:47678507-47678526 | None:intergenic | 20.0% |
| !!! | TTAGCCCTATAAAATTTTAA+TGG | - | chr6.4:47678683-47678702 | None:intergenic | 20.0% |
| !!! | TTTTTGCATTGAAAATTGTA+CGG | + | chr6.4:47677448-47677467 | MS.gene066975:intron | 20.0% |
| ! | AAGATCTTCATATGTTTGTT+TGG | + | chr6.4:47675574-47675593 | MS.gene066975:CDS | 25.0% |
| ! | AATAATGGTAGCAAAAATCT+TGG | + | chr6.4:47675495-47675514 | MS.gene066975:CDS | 25.0% |
| ! | ACAAACAAACATGTTAAATG+TGG | - | chr6.4:47678877-47678896 | None:intergenic | 25.0% |
| ! | ATAAGTAGTTTATCCAAACA+AGG | - | chr6.4:47675740-47675759 | None:intergenic | 25.0% |
| ! | ATATTTAGAGGAGTTAAGAT+GGG | - | chr6.4:47676934-47676953 | None:intergenic | 25.0% |
| ! | ATATTTGTACAACAAACAGT+TGG | + | chr6.4:47678849-47678868 | MS.gene066975:intron | 25.0% |
| ! | CATAGACTGAAAATAGTTTA+CGG | + | chr6.4:47675856-47675875 | MS.gene066975:intron | 25.0% |
| ! | GTACAAAAATATATGCACTA+TGG | + | chr6.4:47678132-47678151 | MS.gene066975:intron | 25.0% |
| ! | TCTTTGCAAATAACATTCTT+TGG | + | chr6.4:47678157-47678176 | MS.gene066975:intron | 25.0% |
| ! | TGGAATCAATATGAAGAATT+TGG | - | chr6.4:47676404-47676423 | None:intergenic | 25.0% |
| ! | TTGTTCTTCAATGTATCATT+TGG | + | chr6.4:47674941-47674960 | MS.gene066975:CDS | 25.0% |
| !! | AAGAAATAATTTTCAGTGGT+TGG | + | chr6.4:47678100-47678119 | MS.gene066975:intron | 25.0% |
| !! | ATGTTTTCTCCTACAAATAA+TGG | + | chr6.4:47675480-47675499 | MS.gene066975:CDS | 25.0% |
| !! | CAATTTGTTTGATGAATTAG+TGG | + | chr6.4:47676029-47676048 | MS.gene066975:intron | 25.0% |
| !! | CTAACCAATGAAACTAATTT+TGG | + | chr6.4:47679084-47679103 | MS.gene066975:intron | 25.0% |
| !! | CTAATACGTCTTTTGTTAAT+CGG | - | chr6.4:47677327-47677346 | None:intergenic | 25.0% |
| !! | TCTTATTTCTTCTTGCTATA+TGG | + | chr6.4:47674776-47674795 | MS.gene066975:CDS | 25.0% |
| !! | TTCATTGGTTAGCATTAAAA+GGG | - | chr6.4:47679076-47679095 | None:intergenic | 25.0% |
| !! | TTTCATTGGTTAGCATTAAA+AGG | - | chr6.4:47679077-47679096 | None:intergenic | 25.0% |
| !! | TTTTTGCTACCATTATTTGT+AGG | - | chr6.4:47675492-47675511 | None:intergenic | 25.0% |
| !!! | AAAAAAGGAGAGGAATTTTT+TGG | - | chr6.4:47677985-47678004 | None:intergenic | 25.0% |
| !!! | CAAGACATAGTTTCTTTTTT+TGG | + | chr6.4:47677504-47677523 | MS.gene066975:intron | 25.0% |
| !!! | TGAATTTTCAGGTAGTTTAA+TGG | + | chr6.4:47674909-47674928 | MS.gene066975:CDS | 25.0% |
| !!! | TTTTATAGGGATTATTTTGG+AGG | + | chr6.4:47678574-47678593 | MS.gene066975:intron | 25.0% |
| AAGATCATAGCTACATAAAG+TGG | - | chr6.4:47674580-47674599 | None:intergenic | 30.0% | |
| AAGTTCAAATTCATTGGTGT+CGG | - | chr6.4:47678270-47678289 | None:intergenic | 30.0% | |
| ATCCTTACAAAATGAACCTT+AGG | + | chr6.4:47674719-47674738 | MS.gene066975:CDS | 30.0% | |
| ATGAAATGGAATGAAAGAAG+TGG | - | chr6.4:47674688-47674707 | None:intergenic | 30.0% | |
| ATGGGAATTCCTTTACTTAA+AGG | + | chr6.4:47674877-47674896 | MS.gene066975:CDS | 30.0% | |
| ATGTAGTACACAAGAGTAAT+GGG | - | chr6.4:47679149-47679168 | None:intergenic | 30.0% | |
| ATTAAGCTAGAGTAAGTGTT+TGG | - | chr6.4:47676249-47676268 | None:intergenic | 30.0% | |
| ATTCCTTAGCAAAGACAAAT+GGG | - | chr6.4:47678960-47678979 | None:intergenic | 30.0% | |
| CATATCTTCCACTTGATATT+TGG | + | chr6.4:47676325-47676344 | MS.gene066975:intron | 30.0% | |
| CATATTTAGAGGAGTTAAGA+TGG | - | chr6.4:47676935-47676954 | None:intergenic | 30.0% | |
| CCATACATTCCTTTAAGTAA+AGG | - | chr6.4:47674889-47674908 | None:intergenic | 30.0% | |
| CCTTTACTTAAAGGAATGTA+TGG | + | chr6.4:47674886-47674905 | MS.gene066975:CDS | 30.0% | |
| CTGAAGATATATAGTGATAG+TGG | + | chr6.4:47677673-47677692 | MS.gene066975:intron | 30.0% | |
| CTTGTGTACTACATCTTAAT+GGG | + | chr6.4:47679155-47679174 | MS.gene066975:CDS | 30.0% | |
| GAAGTAAAATAATGAAGGGT+AGG | - | chr6.4:47679045-47679064 | None:intergenic | 30.0% | |
| GATTGTTTGATGCTATGAAA+TGG | - | chr6.4:47674702-47674721 | None:intergenic | 30.0% | |
| GCATGCAATGAATATTGTAA+TGG | - | chr6.4:47677959-47677978 | None:intergenic | 30.0% | |
| GCTTCTTCTTCATAATTAGA+AGG | - | chr6.4:47675414-47675433 | None:intergenic | 30.0% | |
| GTTAATGCTAAGAAGAGTAA+TGG | + | chr6.4:47675531-47675550 | MS.gene066975:CDS | 30.0% | |
| TAGCTTATGGATCAGTAAAA+TGG | + | chr6.4:47674599-47674618 | MS.gene066975:CDS | 30.0% | |
| TAGTGGTGATACTAATTGAT+TGG | + | chr6.4:47677690-47677709 | MS.gene066975:intron | 30.0% | |
| TATTCCTTAGCAAAGACAAA+TGG | - | chr6.4:47678961-47678980 | None:intergenic | 30.0% | |
| TCAGCATTAGTAAGATTAGA+AGG | - | chr6.4:47675225-47675244 | None:intergenic | 30.0% | |
| TCTAATTACCAAAAACCAAC+AGG | + | chr6.4:47678912-47678931 | MS.gene066975:intron | 30.0% | |
| TCTTCATAATTAGAAGGTCT+TGG | - | chr6.4:47675408-47675427 | None:intergenic | 30.0% | |
| TCTTGTGTACTACATCTTAA+TGG | + | chr6.4:47679154-47679173 | MS.gene066975:CDS | 30.0% | |
| TGATTAAAACTAGAACCTCT+AGG | - | chr6.4:47675282-47675301 | None:intergenic | 30.0% | |
| TTAGTAAGATTAGAAGGTCT+TGG | - | chr6.4:47675219-47675238 | None:intergenic | 30.0% | |
| TTGTGTACTACATCTTAATG+GGG | + | chr6.4:47679156-47679175 | MS.gene066975:CDS | 30.0% | |
| TTGTTTGATGAATTAGTGGA+GGG | + | chr6.4:47676033-47676052 | MS.gene066975:intron | 30.0% | |
| TTTCAGTGGTTGGAATTTAT+TGG | + | chr6.4:47678110-47678129 | MS.gene066975:intron | 30.0% | |
| TTTGTTTGATGAATTAGTGG+AGG | + | chr6.4:47676032-47676051 | MS.gene066975:intron | 30.0% | |
| ! | AAAAATAACCAACCTTTTCC+AGG | - | chr6.4:47675687-47675706 | None:intergenic | 30.0% |
| ! | AACACTTACTCTAGCTTAAT+TGG | + | chr6.4:47676249-47676268 | MS.gene066975:CDS | 30.0% |
| ! | AACCTAAGGTTCATTTTGTA+AGG | - | chr6.4:47674724-47674743 | None:intergenic | 30.0% |
| ! | ATCAACATGGATTGAAACAA+TGG | - | chr6.4:47675046-47675065 | None:intergenic | 30.0% |
| ! | CTCACCAAAATTAGTTTCAT+TGG | - | chr6.4:47679091-47679110 | None:intergenic | 30.0% |
| ! | CTTGAAAACTCATGATTTGT+AGG | + | chr6.4:47678704-47678723 | MS.gene066975:intron | 30.0% |
| ! | GACTAGGCTTATATTGATTA+TGG | + | chr6.4:47676200-47676219 | MS.gene066975:CDS | 30.0% |
| ! | GGAAATAGACTTTGCTATAA+TGG | - | chr6.4:47676487-47676506 | None:intergenic | 30.0% |
| ! | GGCTTATATTGATTATGGTT+TGG | + | chr6.4:47676205-47676224 | MS.gene066975:CDS | 30.0% |
| ! | TCATAATGTTTTCAGTTGAG+TGG | - | chr6.4:47678324-47678343 | None:intergenic | 30.0% |
| ! | TTGGTAATTAGATGCCAAAT+TGG | - | chr6.4:47678904-47678923 | None:intergenic | 30.0% |
| ! | TTTCCACATGCTATGATTTT+TGG | - | chr6.4:47677774-47677793 | None:intergenic | 30.0% |
| !! | CTTTTCATGTTTGAGTTTAG+AGG | + | chr6.4:47674976-47674995 | MS.gene066975:CDS | 30.0% |
| !! | GATTTTTATTCTATGATGGG+TGG | + | chr6.4:47675306-47675325 | MS.gene066975:CDS | 30.0% |
| !!! | GCTCTATCTTTTACTTTTTC+AGG | - | chr6.4:47676670-47676689 | None:intergenic | 30.0% |
| !!! | GGACTAAAAGTACCAATTTT+TGG | + | chr6.4:47678595-47678614 | MS.gene066975:intron | 30.0% |
| AACAAGGTCTAAGAAGGTAA+AGG | - | chr6.4:47675724-47675743 | None:intergenic | 35.0% | |
| AAGAAACAAGACCTGAACAA+CGG | - | chr6.4:47677901-47677920 | None:intergenic | 35.0% | |
| ACATGACATCAGAATCAACA+TGG | - | chr6.4:47675059-47675078 | None:intergenic | 35.0% | |
| ACTTCCAAACACTTTGGTTA+TGG | + | chr6.4:47674858-47674877 | MS.gene066975:CDS | 35.0% | |
| AGGGAAATGAATCAACATGA+AGG | + | chr6.4:47676123-47676142 | MS.gene066975:CDS | 35.0% | |
| ATCAAGTGGAAGATATGCAT+AGG | - | chr6.4:47676322-47676341 | None:intergenic | 35.0% | |
| ATCCTGATATTCTAAGCACA+GGG | + | chr6.4:47678989-47679008 | MS.gene066975:CDS | 35.0% | |
| ATGGAGCAATTTCTCCAAAA+GGG | + | chr6.4:47674795-47674814 | MS.gene066975:CDS | 35.0% | |
| ATTTACTCGAGAAGATCACA+AGG | + | chr6.4:47675177-47675196 | MS.gene066975:CDS | 35.0% | |
| ATTTCAGCATCAGTTTCCAA+TGG | - | chr6.4:47675099-47675118 | None:intergenic | 35.0% | |
| CAACCAAAAATCATAGCATG+TGG | + | chr6.4:47677768-47677787 | MS.gene066975:CDS | 35.0% | |
| CTTATGGATCAGTAAAATGG+TGG | + | chr6.4:47674602-47674621 | MS.gene066975:CDS | 35.0% | |
| CTTCCAAACACTTTGGTTAT+GGG | + | chr6.4:47674859-47674878 | MS.gene066975:CDS | 35.0% | |
| GAAATGAATCAACATGAAGG+TGG | + | chr6.4:47676126-47676145 | MS.gene066975:CDS | 35.0% | |
| GAGAAAGATGAATTCAGCTT+TGG | + | chr6.4:47676084-47676103 | MS.gene066975:CDS | 35.0% | |
| GATGCTGAAATCAAAGAAGA+TGG | + | chr6.4:47675108-47675127 | MS.gene066975:CDS | 35.0% | |
| GATGTAGTACACAAGAGTAA+TGG | - | chr6.4:47679150-47679169 | None:intergenic | 35.0% | |
| GGGTTGAAGTTCAAATTCAT+TGG | - | chr6.4:47678276-47678295 | None:intergenic | 35.0% | |
| GGTTTATCTGCTAATTCAAG+AGG | + | chr6.4:47675375-47675394 | MS.gene066975:CDS | 35.0% | |
| GTAGCTATGATCTTAGCTTA+TGG | + | chr6.4:47674586-47674605 | MS.gene066975:CDS | 35.0% | |
| GTTTGTTTGTCTGTCCAATT+TGG | + | chr6.4:47678887-47678906 | MS.gene066975:intron | 35.0% | |
| TATCAGCTGCTAAAAACCTA+AGG | - | chr6.4:47674738-47674757 | None:intergenic | 35.0% | |
| TATCCAAACAAGGTCTAAGA+AGG | - | chr6.4:47675730-47675749 | None:intergenic | 35.0% | |
| TATGGAGCAATTTCTCCAAA+AGG | + | chr6.4:47674794-47674813 | MS.gene066975:CDS | 35.0% | |
| TGATTCTGATGTCATGTCAT+TGG | + | chr6.4:47675062-47675081 | MS.gene066975:CDS | 35.0% | |
| TGGTAATAGAGGAATGGAAA+GGG | + | chr6.4:47676104-47676123 | MS.gene066975:CDS | 35.0% | |
| TTACCTTCTTAGACCTTGTT+TGG | + | chr6.4:47675724-47675743 | MS.gene066975:intron | 35.0% | |
| TTCCTTAAACAATGCCCTTA+GGG | + | chr6.4:47677528-47677547 | MS.gene066975:intron | 35.0% | |
| TTGATTCCTGAACATTGATC+AGG | - | chr6.4:47674640-47674659 | None:intergenic | 35.0% | |
| TTTGTAGGAGAAAACATTCC+TGG | - | chr6.4:47675477-47675496 | None:intergenic | 35.0% | |
| ! | ATAGACTTTGCTATAATGGC+AGG | - | chr6.4:47676483-47676502 | None:intergenic | 35.0% |
| ! | ATTCCCATAACCAAAGTGTT+TGG | - | chr6.4:47674865-47674884 | None:intergenic | 35.0% |
| ! | GAATTCAGCTTTGGTAATAG+AGG | + | chr6.4:47676093-47676112 | MS.gene066975:CDS | 35.0% |
| ! | GGAATGTATGGTGAATTTTC+AGG | + | chr6.4:47674898-47674917 | MS.gene066975:CDS | 35.0% |
| ! | TAATGTGTCATTCGTTAGTC+AGG | - | chr6.4:47677263-47677282 | None:intergenic | 35.0% |
| ! | TGGTTTGTGTTGTATATTGC+AGG | + | chr6.4:47676442-47676461 | MS.gene066975:intron | 35.0% |
| ! | TTGGTAATAGAGGAATGGAA+AGG | + | chr6.4:47676103-47676122 | MS.gene066975:CDS | 35.0% |
| ! | TTTTCACCTGATCAATGTTC+AGG | + | chr6.4:47674631-47674650 | MS.gene066975:CDS | 35.0% |
| !!! | AAAGGAGAGGAATTTTTTGG+AGG | - | chr6.4:47677982-47678001 | None:intergenic | 35.0% |
| !!! | AAGGAGAGGAATTTTTTGGA+GGG | - | chr6.4:47677981-47678000 | None:intergenic | 35.0% |
| !!! | GAGAATGCAGTGTCATTTTT+GGG | + | chr6.4:47679108-47679127 | MS.gene066975:intron | 35.0% |
| !!! | TGAGAATGCAGTGTCATTTT+TGG | + | chr6.4:47679107-47679126 | MS.gene066975:intron | 35.0% |
| !!! | TGTTTTGACAGGTTTGTTCA+TGG | + | chr6.4:47677740-47677759 | MS.gene066975:intron | 35.0% |
| !!! | TTTTATTCTATGATGGGTGG+TGG | + | chr6.4:47675309-47675328 | MS.gene066975:CDS | 35.0% |
| AAATGCTAACAAGTGCCCTA+AGG | + | chr6.4:47677397-47677416 | MS.gene066975:intron | 40.0% | |
| AATGCTAACAAGTGCCCTAA+GGG | + | chr6.4:47677398-47677417 | MS.gene066975:intron | 40.0% | |
| ACAAATGGGACAATTCCTTG+TGG | - | chr6.4:47678946-47678965 | None:intergenic | 40.0% | |
| ACCCATTGAAAAAGCTGCAA+CGG | - | chr6.4:47677799-47677818 | None:intergenic | 40.0% | |
| AGACACTCAAGAGGACTATT+TGG | + | chr6.4:47676062-47676081 | MS.gene066975:CDS | 40.0% | |
| ATGCTCAAACAATGCCCTTA+GGG | - | chr6.4:47677415-47677434 | None:intergenic | 40.0% | |
| ATTGGATGGTAGAACACCAT+TGG | + | chr6.4:47675080-47675099 | MS.gene066975:CDS | 40.0% | |
| ATTTCCATACTGTCAGATGC+AGG | + | chr6.4:47676501-47676520 | MS.gene066975:CDS | 40.0% | |
| CAGACAGTCCAAATATCAAG+TGG | - | chr6.4:47676336-47676355 | None:intergenic | 40.0% | |
| CATCCTGATATTCTAAGCAC+AGG | + | chr6.4:47678988-47679007 | MS.gene066975:CDS | 40.0% | |
| CCAAAAGGGGTTGTTTAGAA+TGG | + | chr6.4:47674809-47674828 | MS.gene066975:CDS | 40.0% | |
| CTCAACACTTCCAAACACTT+TGG | + | chr6.4:47674852-47674871 | MS.gene066975:CDS | 40.0% | |
| GGAGAAAACATTCCTGGATT+AGG | - | chr6.4:47675471-47675490 | None:intergenic | 40.0% | |
| GGTGGAAGAAACTCAAACTT+TGG | + | chr6.4:47675327-47675346 | MS.gene066975:CDS | 40.0% | |
| GTTCCTTAAACAATGCCCTT+AGG | + | chr6.4:47677527-47677546 | MS.gene066975:intron | 40.0% | |
| TCAAAACAAGCATGCCAAAG+AGG | - | chr6.4:47677728-47677747 | None:intergenic | 40.0% | |
| TCTGATGTCATGTCATTGGA+TGG | + | chr6.4:47675066-47675085 | MS.gene066975:CDS | 40.0% | |
| TGGAGCAATTTCTCCAAAAG+GGG | + | chr6.4:47674796-47674815 | MS.gene066975:CDS | 40.0% | |
| TGTCATTCGTTAGTCAGGTT+CGG | - | chr6.4:47677258-47677277 | None:intergenic | 40.0% | |
| TGTCCCATTTGTCTTTGCTA+AGG | + | chr6.4:47678954-47678973 | MS.gene066975:CDS | 40.0% | |
| TTGAATGTGTCTCCTGGAAA+AGG | + | chr6.4:47675672-47675691 | MS.gene066975:CDS | 40.0% | |
| ! | AAACTAGAACCTCTAGGAGT+AGG | - | chr6.4:47675276-47675295 | None:intergenic | 40.0% |
| ! | AACTAGAACCTCTAGGAGTA+GGG | - | chr6.4:47675275-47675294 | None:intergenic | 40.0% |
| ! | AATTGGTCTCACTTGGTCTT+TGG | + | chr6.4:47676266-47676285 | MS.gene066975:CDS | 40.0% |
| ! | CAGCAAAGAGTGCAACAAAA+CGG | - | chr6.4:47674663-47674682 | None:intergenic | 40.0% |
| ! | CAGCTTTGGTAATAGAGGAA+TGG | + | chr6.4:47676098-47676117 | MS.gene066975:CDS | 40.0% |
| ! | CCATTCTAAACAACCCCTTT+TGG | - | chr6.4:47674812-47674831 | None:intergenic | 40.0% |
| ! | CTAGCTTAATTGGTCTCACT+TGG | + | chr6.4:47676259-47676278 | MS.gene066975:CDS | 40.0% |
| ! | CTTGGTCTTTGGTTTCATTC+AGG | + | chr6.4:47676277-47676296 | MS.gene066975:CDS | 40.0% |
| ! | TGTTTGAGTTTAGAGGAGCA+AGG | + | chr6.4:47674983-47675002 | MS.gene066975:CDS | 40.0% |
| !! | GTTAAGTTGAATGTGTCTCC+TGG | + | chr6.4:47675666-47675685 | MS.gene066975:CDS | 40.0% |
| !! | TCATTTGCTGTTGGACTCAA+AGG | + | chr6.4:47677858-47677877 | MS.gene066975:CDS | 40.0% |
| !!! | TCCGTTGCAGCTTTTTCAAT+GGG | + | chr6.4:47677795-47677814 | MS.gene066975:CDS | 40.0% |
| !!! | TTCCGTTGCAGCTTTTTCAA+TGG | + | chr6.4:47677794-47677813 | MS.gene066975:CDS | 40.0% |
| !!! | TTTGGCATGCTTGTTTTGAC+AGG | + | chr6.4:47677729-47677748 | MS.gene066975:intron | 40.0% |
| AAACAAGCATGCCAAAGAGG+AGG | - | chr6.4:47677725-47677744 | None:intergenic | 45.0% | |
| AACTATCCTGCACCTAATCC+AGG | + | chr6.4:47675456-47675475 | MS.gene066975:CDS | 45.0% | |
| AAGTCCTGCATCTGACAGTA+TGG | - | chr6.4:47676508-47676527 | None:intergenic | 45.0% | |
| ACCTCATCACATCACAAGCT+TGG | - | chr6.4:47677597-47677616 | None:intergenic | 45.0% | |
| ATACTGTCAGATGCAGGACT+TGG | + | chr6.4:47676507-47676526 | MS.gene066975:CDS | 45.0% | |
| ATGGGTGTGAGATTCCTTGT+TGG | + | chr6.4:47677813-47677832 | MS.gene066975:CDS | 45.0% | |
| ATGTGATGAGGTGTGGTTAG+TGG | + | chr6.4:47677605-47677624 | MS.gene066975:intron | 45.0% | |
| ATGTGTCTCCTGGAAAAGGT+TGG | + | chr6.4:47675676-47675695 | MS.gene066975:intron | 45.0% | |
| CAAAGCAAGCAAGCAAGCAA+AGG | + | chr6.4:47676765-47676784 | MS.gene066975:intron | 45.0% | |
| CAACATGAAGGTGGTGAGAA+AGG | + | chr6.4:47676135-47676154 | MS.gene066975:CDS | 45.0% | |
| CACCCTGTGCTTAGAATATC+AGG | - | chr6.4:47678994-47679013 | None:intergenic | 45.0% | |
| CTACCATGTCATGACAGCAA+TGG | + | chr6.4:47674552-47674571 | MS.gene066975:CDS | 45.0% | |
| CTTGCTAACAAGTGCCCTAA+GGG | - | chr6.4:47677545-47677564 | None:intergenic | 45.0% | |
| CTTTCATGTTGCCGTTGTTC+AGG | + | chr6.4:47677887-47677906 | MS.gene066975:CDS | 45.0% | |
| GATGCTCAAACAATGCCCTT+AGG | - | chr6.4:47677416-47677435 | None:intergenic | 45.0% | |
| TCAAGAAACCCTACTCCTAG+AGG | + | chr6.4:47675264-47675283 | MS.gene066975:CDS | 45.0% | |
| TCACCTGTCTCTGATGTGTT+TGG | + | chr6.4:47675609-47675628 | MS.gene066975:CDS | 45.0% | |
| TCTTGCTAACAAGTGCCCTA+AGG | - | chr6.4:47677546-47677565 | None:intergenic | 45.0% | |
| ! | AACATTCCTGGATTAGGTGC+AGG | - | chr6.4:47675465-47675484 | None:intergenic | 45.0% |
| ! | GTGTTTGGTGGACATGACTT+TGG | + | chr6.4:47675624-47675643 | MS.gene066975:CDS | 45.0% |
| !! | TGCCCTAAGGGCATTGTTTA+AGG | - | chr6.4:47677533-47677552 | None:intergenic | 45.0% |
| !!! | AAGAGCTGCCTGTTGGTTTT+TGG | - | chr6.4:47678923-47678942 | None:intergenic | 45.0% |
| !! | ATTAAAAGTAAATTAAAAAA+AGG | - | chr6.4:47678000-47678019 | None:intergenic | 5.0% |
| !! | TTGTATAATAATTAATTATT+GGG | + | chr6.4:47678463-47678482 | MS.gene066975:intron | 5.0% |
| !! | TTTGTATAATAATTAATTAT+TGG | + | chr6.4:47678462-47678481 | MS.gene066975:intron | 5.0% |
| !!! | TTTTAAATTAACTTTTATTA+TGG | + | chr6.4:47677133-47677152 | MS.gene066975:intron | 5.0% |
| ACAATGGAACCAGCAGTGTC+AGG | - | chr6.4:47675030-47675049 | None:intergenic | 50.0% | |
| AGCAAGCAAGCAAGCAAAGG+TGG | + | chr6.4:47676768-47676787 | MS.gene066975:intron | 50.0% | |
| AGCCTAGTCATCACACTAGC+TGG | - | chr6.4:47676189-47676208 | None:intergenic | 50.0% | |
| CACCAGCTAGTGTGATGACT+AGG | + | chr6.4:47676184-47676203 | MS.gene066975:CDS | 50.0% | |
| CATGAAGGTGGTGAGAAAGG+TGG | + | chr6.4:47676138-47676157 | MS.gene066975:CDS | 50.0% | |
| CCACCAAACACATCAGAGAC+AGG | - | chr6.4:47675615-47675634 | None:intergenic | 50.0% | |
| CCTGTCTCTGATGTGTTTGG+TGG | + | chr6.4:47675612-47675631 | MS.gene066975:CDS | 50.0% | |
| CTAGTCATCACACTAGCTGG+TGG | - | chr6.4:47676186-47676205 | None:intergenic | 50.0% | |
| GAACAGTTTCCTGACACTGC+TGG | + | chr6.4:47675018-47675037 | MS.gene066975:CDS | 50.0% | |
| GCACCATTGCTGTCATGACA+TGG | - | chr6.4:47674558-47674577 | None:intergenic | 50.0% | |
| GCCAAGCTTGTGATGTGATG+AGG | + | chr6.4:47677593-47677612 | MS.gene066975:intron | 50.0% | |
| GCTTGTGATGTGATGAGGTG+TGG | + | chr6.4:47677598-47677617 | MS.gene066975:intron | 50.0% | |
| GGCATGGCTATGTTCAGTCT+TGG | + | chr6.4:47676528-47676547 | MS.gene066975:CDS | 50.0% | |
| GGGTCATAGAGACACTCAAG+AGG | + | chr6.4:47676053-47676072 | MS.gene066975:CDS | 50.0% | |
| TGATGAGGTGTGGTTAGTGG+TGG | + | chr6.4:47677608-47677627 | MS.gene066975:intron | 50.0% | |
| !! | GCAGCTGCTTCATTTGCTGT+TGG | + | chr6.4:47677849-47677868 | MS.gene066975:CDS | 50.0% |
| CAACAGGCAGCTCTTCCACA+AGG | + | chr6.4:47678928-47678947 | MS.gene066975:intron | 55.0% | |
| CCATGACAGCTGGACCAACA+AGG | - | chr6.4:47677830-47677849 | None:intergenic | 55.0% | |
| CCTTGTTGGTCCAGCTGTCA+TGG | + | chr6.4:47677827-47677846 | MS.gene066975:CDS | 55.0% | |
| CGTGCAATCGTTGACGACAG+AGG | + | chr6.4:47676376-47676395 | MS.gene066975:intron | 55.0% | |
| CTTGTGGAAGAGCTGCCTGT+TGG | - | chr6.4:47678930-47678949 | None:intergenic | 55.0% | |
| GCAAGCAAGCAAAGGTGGAG+TGG | + | chr6.4:47676773-47676792 | MS.gene066975:intron | 55.0% | |
| GGCATGCTTTGCCTCCTCTT+TGG | + | chr6.4:47677711-47677730 | MS.gene066975:intron | 55.0% | |
| GGTGGTGAGAAAGGTGGAGA+TGG | + | chr6.4:47676144-47676163 | MS.gene066975:CDS | 55.0% | |
| GTCAGATGCAGGACTTGGCA+TGG | + | chr6.4:47676512-47676531 | MS.gene066975:CDS | 55.0% | |
| GAAGCAGCTGCCATGACAGC+TGG | - | chr6.4:47677840-47677859 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.4 | gene | 47674532 | 47679184 | 47674532 | ID=MS.gene066975 |
| chr6.4 | mRNA | 47674532 | 47679184 | 47674532 | ID=MS.gene066975.t1;Parent=MS.gene066975 |
| chr6.4 | exon | 47674532 | 47675693 | 47674532 | ID=MS.gene066975.t1.exon1;Parent=MS.gene066975.t1 |
| chr6.4 | CDS | 47674532 | 47675693 | 47674532 | ID=cds.MS.gene066975.t1;Parent=MS.gene066975.t1 |
| chr6.4 | exon | 47676049 | 47676298 | 47676049 | ID=MS.gene066975.t1.exon2;Parent=MS.gene066975.t1 |
| chr6.4 | CDS | 47676049 | 47676298 | 47676049 | ID=cds.MS.gene066975.t1;Parent=MS.gene066975.t1 |
| chr6.4 | exon | 47676464 | 47676549 | 47676464 | ID=MS.gene066975.t1.exon3;Parent=MS.gene066975.t1 |
| chr6.4 | CDS | 47676464 | 47676549 | 47676464 | ID=cds.MS.gene066975.t1;Parent=MS.gene066975.t1 |
| chr6.4 | exon | 47677751 | 47677908 | 47677751 | ID=MS.gene066975.t1.exon4;Parent=MS.gene066975.t1 |
| chr6.4 | CDS | 47677751 | 47677908 | 47677751 | ID=cds.MS.gene066975.t1;Parent=MS.gene066975.t1 |
| chr6.4 | exon | 47678934 | 47679010 | 47678934 | ID=MS.gene066975.t1.exon5;Parent=MS.gene066975.t1 |
| chr6.4 | CDS | 47678934 | 47679010 | 47678934 | ID=cds.MS.gene066975.t1;Parent=MS.gene066975.t1 |
| chr6.4 | exon | 47679118 | 47679184 | 47679118 | ID=MS.gene066975.t1.exon6;Parent=MS.gene066975.t1 |
| chr6.4 | CDS | 47679118 | 47679184 | 47679118 | ID=cds.MS.gene066975.t1;Parent=MS.gene066975.t1 |
| Gene Sequence |
| Protein sequence |
