Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene62984.t1 | XP_013466518.1 | 99.7 | 621 | 2 | 0 | 1 | 621 | 1 | 621 | 1.0e-309 | 1072 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene62984.t1 | Q8RWZ6 | 72.3 | 636 | 141 | 13 | 1 | 621 | 1 | 616 | 6.1e-210 | 731.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene62984.t1 | Q8GV75 | 99.7 | 621 | 2 | 0 | 1 | 621 | 1 | 621 | 7.4e-310 | 1072.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene62984 | 0.810581 | 1.07E-50 | -1.69E-46 |
| MS.gene049173 | MS.gene62984 | 0.816205 | 6.24E-52 | -1.69E-46 |
| MS.gene049217 | MS.gene62984 | 0.842072 | 3.23E-58 | -1.69E-46 |
| MS.gene049222 | MS.gene62984 | 0.826429 | 2.73E-54 | -1.69E-46 |
| MS.gene049285 | MS.gene62984 | 0.821624 | 3.66E-53 | -1.69E-46 |
| MS.gene049320 | MS.gene62984 | 0.808755 | 2.65E-50 | -1.69E-46 |
| MS.gene049427 | MS.gene62984 | 0.823722 | 1.19E-53 | -1.69E-46 |
| MS.gene049609 | MS.gene62984 | 0.825498 | 4.54E-54 | -1.69E-46 |
| MS.gene049805 | MS.gene62984 | 0.835143 | 1.99E-56 | -1.69E-46 |
| MS.gene049907 | MS.gene62984 | 0.822066 | 2.89E-53 | -1.69E-46 |
| MS.gene050076 | MS.gene62984 | 0.800288 | 1.55E-48 | -1.69E-46 |
| MS.gene050163 | MS.gene62984 | 0.811019 | 8.63E-51 | -1.69E-46 |
| MS.gene050432 | MS.gene62984 | 0.822409 | 2.41E-53 | -1.69E-46 |
| MS.gene050504 | MS.gene62984 | 0.81043 | 1.16E-50 | -1.69E-46 |
| MS.gene050520 | MS.gene62984 | 0.811602 | 6.45E-51 | -1.69E-46 |
| MS.gene050538 | MS.gene62984 | 0.82638 | 2.80E-54 | -1.69E-46 |
| MS.gene050593 | MS.gene62984 | 0.822791 | 1.96E-53 | -1.69E-46 |
| MS.gene050686 | MS.gene62984 | 0.800404 | 1.46E-48 | -1.69E-46 |
| MS.gene050699 | MS.gene62984 | 0.803395 | 3.56E-49 | -1.69E-46 |
| MS.gene050747 | MS.gene62984 | 0.825551 | 4.41E-54 | -1.69E-46 |
| MS.gene050772 | MS.gene62984 | 0.832007 | 1.21E-55 | -1.69E-46 |
| MS.gene050950 | MS.gene62984 | 0.814404 | 1.57E-51 | -1.69E-46 |
| MS.gene05100 | MS.gene62984 | 0.81106 | 8.46E-51 | -1.69E-46 |
| MS.gene05105 | MS.gene62984 | 0.823098 | 1.66E-53 | -1.69E-46 |
| MS.gene051255 | MS.gene62984 | 0.801749 | 7.78E-49 | -1.69E-46 |
| MS.gene051387 | MS.gene62984 | 0.836255 | 1.04E-56 | -1.69E-46 |
| MS.gene051551 | MS.gene62984 | 0.810017 | 1.42E-50 | -1.69E-46 |
| MS.gene051666 | MS.gene62984 | 0.816244 | 6.11E-52 | -1.69E-46 |
| MS.gene051692 | MS.gene62984 | 0.83666 | 8.21E-57 | -1.69E-46 |
| MS.gene051734 | MS.gene62984 | 0.803942 | 2.74E-49 | -1.69E-46 |
| MS.gene051810 | MS.gene62984 | 0.804462 | 2.14E-49 | -1.69E-46 |
| MS.gene051858 | MS.gene62984 | 0.800873 | 1.18E-48 | -1.69E-46 |
| MS.gene052164 | MS.gene62984 | 0.80074 | 1.25E-48 | -1.69E-46 |
| MS.gene052271 | MS.gene62984 | 0.83581 | 1.35E-56 | -1.69E-46 |
| MS.gene052379 | MS.gene62984 | 0.814745 | 1.32E-51 | -1.69E-46 |
| MS.gene052421 | MS.gene62984 | 0.820813 | 5.63E-53 | -1.69E-46 |
| MS.gene052481 | MS.gene62984 | 0.829109 | 6.19E-55 | -1.69E-46 |
| MS.gene052484 | MS.gene62984 | 0.854101 | 1.54E-61 | -1.69E-46 |
| MS.gene052485 | MS.gene62984 | 0.82702 | 1.97E-54 | -1.69E-46 |
| MS.gene052501 | MS.gene62984 | 0.821282 | 4.39E-53 | -1.69E-46 |
| MS.gene052503 | MS.gene62984 | 0.824005 | 1.02E-53 | -1.69E-46 |
| MS.gene052505 | MS.gene62984 | 0.81448 | 1.51E-51 | -1.69E-46 |
| MS.gene052615 | MS.gene62984 | 0.831486 | 1.62E-55 | -1.69E-46 |
| MS.gene052823 | MS.gene62984 | 0.817973 | 2.50E-52 | -1.69E-46 |
| MS.gene052825 | MS.gene62984 | 0.809228 | 2.10E-50 | -1.69E-46 |
| MS.gene052982 | MS.gene62984 | 0.80516 | 1.53E-49 | -1.69E-46 |
| MS.gene053103 | MS.gene62984 | 0.821866 | 3.22E-53 | -1.69E-46 |
| MS.gene053104 | MS.gene62984 | 0.846643 | 1.91E-59 | -1.69E-46 |
| MS.gene053207 | MS.gene62984 | 0.839776 | 1.29E-57 | -1.69E-46 |
| MS.gene053213 | MS.gene62984 | 0.846992 | 1.53E-59 | -1.69E-46 |
| MS.gene053286 | MS.gene62984 | 0.845236 | 4.61E-59 | -1.69E-46 |
| MS.gene053322 | MS.gene62984 | 0.832479 | 9.24E-56 | -1.69E-46 |
| MS.gene053436 | MS.gene62984 | 0.815204 | 1.04E-51 | -1.69E-46 |
| MS.gene053480 | MS.gene62984 | 0.800169 | 1.63E-48 | -1.69E-46 |
| MS.gene053574 | MS.gene62984 | 0.825943 | 3.56E-54 | -1.69E-46 |
| MS.gene053632 | MS.gene62984 | 0.850683 | 1.45E-60 | -1.69E-46 |
| MS.gene053813 | MS.gene62984 | 0.823631 | 1.25E-53 | -1.69E-46 |
| MS.gene054408 | MS.gene62984 | 0.804502 | 2.10E-49 | -1.69E-46 |
| MS.gene054595 | MS.gene62984 | 0.822994 | 1.76E-53 | -1.69E-46 |
| MS.gene054600 | MS.gene62984 | 0.840392 | 8.94E-58 | -1.69E-46 |
| MS.gene054642 | MS.gene62984 | 0.82863 | 8.08E-55 | -1.69E-46 |
| MS.gene054927 | MS.gene62984 | 0.823538 | 1.31E-53 | -1.69E-46 |
| MS.gene05505 | MS.gene62984 | 0.828092 | 1.09E-54 | -1.69E-46 |
| MS.gene055206 | MS.gene62984 | 0.825098 | 5.64E-54 | -1.69E-46 |
| MS.gene055212 | MS.gene62984 | 0.816009 | 6.90E-52 | -1.69E-46 |
| MS.gene055362 | MS.gene62984 | 0.810155 | 1.33E-50 | -1.69E-46 |
| MS.gene055412 | MS.gene62984 | 0.809553 | 1.79E-50 | -1.69E-46 |
| MS.gene055499 | MS.gene62984 | 0.808409 | 3.14E-50 | -1.69E-46 |
| MS.gene055502 | MS.gene62984 | 0.830847 | 2.33E-55 | -1.69E-46 |
| MS.gene055577 | MS.gene62984 | 0.815957 | 7.08E-52 | -1.69E-46 |
| MS.gene055633 | MS.gene62984 | 0.835767 | 1.39E-56 | -1.69E-46 |
| MS.gene055636 | MS.gene62984 | 0.806364 | 8.52E-50 | -1.69E-46 |
| MS.gene055647 | MS.gene62984 | 0.850015 | 2.23E-60 | -1.69E-46 |
| MS.gene055722 | MS.gene62984 | 0.829586 | 4.74E-55 | -1.69E-46 |
| MS.gene055911 | MS.gene62984 | 0.80446 | 2.14E-49 | -1.69E-46 |
| MS.gene05592 | MS.gene62984 | 0.81444 | 1.54E-51 | -1.69E-46 |
| MS.gene055941 | MS.gene62984 | 0.839867 | 1.23E-57 | -1.69E-46 |
| MS.gene056166 | MS.gene62984 | 0.838988 | 2.07E-57 | -1.69E-46 |
| MS.gene056374 | MS.gene62984 | 0.839162 | 1.87E-57 | -1.69E-46 |
| MS.gene056410 | MS.gene62984 | 0.800132 | 1.66E-48 | -1.69E-46 |
| MS.gene056422 | MS.gene62984 | 0.80453 | 2.07E-49 | -1.69E-46 |
| MS.gene056657 | MS.gene62984 | 0.833228 | 6.02E-56 | -1.69E-46 |
| MS.gene056942 | MS.gene62984 | 0.823464 | 1.37E-53 | -1.69E-46 |
| MS.gene057011 | MS.gene62984 | 0.828665 | 7.93E-55 | -1.69E-46 |
| MS.gene057076 | MS.gene62984 | 0.818077 | 2.37E-52 | -1.69E-46 |
| MS.gene057129 | MS.gene62984 | 0.815445 | 9.21E-52 | -1.69E-46 |
| MS.gene057146 | MS.gene62984 | 0.813286 | 2.76E-51 | -1.69E-46 |
| MS.gene057331 | MS.gene62984 | 0.800419 | 1.45E-48 | -1.69E-46 |
| MS.gene057416 | MS.gene62984 | 0.838974 | 2.09E-57 | -1.69E-46 |
| MS.gene057749 | MS.gene62984 | 0.822906 | 1.84E-53 | -1.69E-46 |
| MS.gene057823 | MS.gene62984 | 0.831348 | 1.76E-55 | -1.69E-46 |
| MS.gene057856 | MS.gene62984 | 0.811115 | 8.23E-51 | -1.69E-46 |
| MS.gene057926 | MS.gene62984 | 0.810918 | 9.08E-51 | -1.69E-46 |
| MS.gene058019 | MS.gene62984 | 0.855537 | 5.90E-62 | -1.69E-46 |
| MS.gene058293 | MS.gene62984 | 0.812 | 5.28E-51 | -1.69E-46 |
| MS.gene058338 | MS.gene62984 | 0.813429 | 2.57E-51 | -1.69E-46 |
| MS.gene05837 | MS.gene62984 | 0.802916 | 4.47E-49 | -1.69E-46 |
| MS.gene058419 | MS.gene62984 | 0.833326 | 5.69E-56 | -1.69E-46 |
| MS.gene058444 | MS.gene62984 | 0.8083 | 3.31E-50 | -1.69E-46 |
| MS.gene058660 | MS.gene62984 | 0.801789 | 7.63E-49 | -1.69E-46 |
| MS.gene059023 | MS.gene62984 | 0.804325 | 2.28E-49 | -1.69E-46 |
| MS.gene05913 | MS.gene62984 | 0.804728 | 1.88E-49 | -1.69E-46 |
| MS.gene05934 | MS.gene62984 | 0.830616 | 2.66E-55 | -1.69E-46 |
| MS.gene059367 | MS.gene62984 | 0.832221 | 1.07E-55 | -1.69E-46 |
| MS.gene059368 | MS.gene62984 | 0.817813 | 2.71E-52 | -1.69E-46 |
| MS.gene059455 | MS.gene62984 | 0.833146 | 6.31E-56 | -1.69E-46 |
| MS.gene059536 | MS.gene62984 | 0.824287 | 8.76E-54 | -1.69E-46 |
| MS.gene059676 | MS.gene62984 | 0.802376 | 5.78E-49 | -1.69E-46 |
| MS.gene059688 | MS.gene62984 | 0.823332 | 1.47E-53 | -1.69E-46 |
| MS.gene059692 | MS.gene62984 | 0.821757 | 3.41E-53 | -1.69E-46 |
| MS.gene059695 | MS.gene62984 | 0.826693 | 2.36E-54 | -1.69E-46 |
| MS.gene059711 | MS.gene62984 | 0.819052 | 1.42E-52 | -1.69E-46 |
| MS.gene059718 | MS.gene62984 | 0.822631 | 2.14E-53 | -1.69E-46 |
| MS.gene059960 | MS.gene62984 | 0.812909 | 3.34E-51 | -1.69E-46 |
| MS.gene060193 | MS.gene62984 | 0.803178 | 3.95E-49 | -1.69E-46 |
| MS.gene060356 | MS.gene62984 | 0.801898 | 7.24E-49 | -1.69E-46 |
| MS.gene060482 | MS.gene62984 | 0.814301 | 1.65E-51 | -1.69E-46 |
| MS.gene060703 | MS.gene62984 | 0.804869 | 1.76E-49 | -1.69E-46 |
| MS.gene060728 | MS.gene62984 | 0.801765 | 7.72E-49 | -1.69E-46 |
| MS.gene06077 | MS.gene62984 | 0.801032 | 1.09E-48 | -1.69E-46 |
| MS.gene060804 | MS.gene62984 | 0.849165 | 3.85E-60 | -1.69E-46 |
| MS.gene060835 | MS.gene62984 | 0.835097 | 2.05E-56 | -1.69E-46 |
| MS.gene060837 | MS.gene62984 | 0.840381 | 9.00E-58 | -1.69E-46 |
| MS.gene06092 | MS.gene62984 | 0.830387 | 3.02E-55 | -1.69E-46 |
| MS.gene061041 | MS.gene62984 | 0.813271 | 2.79E-51 | -1.69E-46 |
| MS.gene061200 | MS.gene62984 | 0.8469 | 1.62E-59 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene066975 | MS.gene62984 | PPI |
| MS.gene62984 | MS.gene042857 | PPI |
| MS.gene79784 | MS.gene62984 | PPI |
| MS.gene62984 | MS.gene59137 | PPI |
| MS.gene62984 | MS.gene82094 | PPI |
| MS.gene83125 | MS.gene62984 | PPI |
| MS.gene026602 | MS.gene62984 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene62984.t1 | MTR_1g030890 | 99.839 | 621 | 1 | 0 | 1 | 621 | 1 | 621 | 0.0 | 1275 |
| MS.gene62984.t1 | MTR_1g030890 | 99.808 | 522 | 1 | 0 | 1 | 522 | 1 | 522 | 0.0 | 1078 |
| MS.gene62984.t1 | MTR_4g084870 | 77.877 | 669 | 90 | 15 | 1 | 621 | 1 | 659 | 0.0 | 975 |
| MS.gene62984.t1 | MTR_6g069510 | 63.281 | 640 | 180 | 13 | 1 | 621 | 1 | 604 | 0.0 | 759 |
| MS.gene62984.t1 | MTR_7g089360 | 63.323 | 638 | 170 | 14 | 1 | 621 | 1 | 591 | 0.0 | 736 |
| MS.gene62984.t1 | MTR_4g127100 | 58.779 | 655 | 206 | 12 | 1 | 621 | 1 | 625 | 0.0 | 713 |
| MS.gene62984.t1 | MTR_7g089360 | 61.859 | 624 | 174 | 14 | 1 | 607 | 1 | 577 | 0.0 | 700 |
| MS.gene62984.t1 | MTR_8g107360 | 60.890 | 629 | 133 | 14 | 1 | 621 | 1 | 524 | 0.0 | 692 |
| MS.gene62984.t1 | MTR_4g127090 | 53.175 | 630 | 223 | 12 | 1 | 621 | 1 | 567 | 0.0 | 601 |
| MS.gene62984.t1 | MTR_4g127100 | 54.480 | 558 | 190 | 12 | 1 | 524 | 1 | 528 | 0.0 | 543 |
| MS.gene62984.t1 | MTR_1g029190 | 47.943 | 632 | 213 | 19 | 1 | 621 | 1 | 527 | 2.72e-166 | 485 |
| MS.gene62984.t1 | MTR_2g038470 | 49.402 | 251 | 102 | 5 | 1 | 248 | 1 | 229 | 3.78e-74 | 246 |
| MS.gene62984.t1 | MTR_2g038470 | 46.862 | 239 | 107 | 3 | 401 | 621 | 273 | 509 | 1.06e-63 | 219 |
| MS.gene62984.t1 | MTR_7g009370 | 67.089 | 158 | 52 | 0 | 464 | 621 | 200 | 357 | 3.23e-65 | 218 |
| MS.gene62984.t1 | MTR_7g009370 | 55.696 | 158 | 70 | 0 | 1 | 158 | 1 | 158 | 2.70e-52 | 184 |
| MS.gene62984.t1 | MTR_6g011400 | 63.190 | 163 | 58 | 1 | 461 | 621 | 199 | 361 | 1.03e-62 | 212 |
| MS.gene62984.t1 | MTR_6g011400 | 56.329 | 158 | 68 | 1 | 1 | 157 | 1 | 158 | 8.42e-51 | 180 |
| MS.gene62984.t1 | MTR_7g079720 | 53.289 | 152 | 71 | 0 | 468 | 619 | 208 | 359 | 1.42e-51 | 182 |
| MS.gene62984.t1 | MTR_7g079720 | 51.613 | 155 | 75 | 0 | 1 | 155 | 1 | 155 | 4.27e-47 | 170 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene62984.t1 | AT1G70940 | 74.923 | 646 | 131 | 13 | 1 | 621 | 1 | 640 | 0.0 | 908 |
| MS.gene62984.t1 | AT2G01420 | 74.725 | 637 | 120 | 14 | 1 | 621 | 1 | 612 | 0.0 | 900 |
| MS.gene62984.t1 | AT2G01420 | 74.411 | 637 | 126 | 13 | 1 | 621 | 1 | 616 | 0.0 | 892 |
| MS.gene62984.t1 | AT1G23080 | 73.585 | 636 | 136 | 12 | 1 | 621 | 1 | 619 | 0.0 | 891 |
| MS.gene62984.t1 | AT1G23080 | 72.956 | 636 | 136 | 11 | 1 | 621 | 1 | 615 | 0.0 | 884 |
| MS.gene62984.t1 | AT1G23080 | 72.956 | 636 | 136 | 11 | 1 | 621 | 1 | 615 | 0.0 | 884 |
| MS.gene62984.t1 | AT1G23080 | 70.391 | 537 | 123 | 11 | 1 | 522 | 1 | 516 | 0.0 | 722 |
| MS.gene62984.t1 | AT5G57090 | 58.471 | 667 | 211 | 11 | 1 | 621 | 1 | 647 | 0.0 | 720 |
| MS.gene62984.t1 | AT2G01420 | 72.305 | 538 | 112 | 13 | 1 | 522 | 1 | 517 | 0.0 | 719 |
| MS.gene62984.t1 | AT1G73590 | 59.538 | 650 | 206 | 12 | 1 | 621 | 1 | 622 | 0.0 | 706 |
| MS.gene62984.t1 | AT5G57090 | 55.556 | 567 | 186 | 11 | 101 | 621 | 1 | 547 | 0.0 | 555 |
| MS.gene62984.t1 | AT1G77110 | 48.413 | 630 | 256 | 15 | 1 | 621 | 1 | 570 | 2.88e-180 | 523 |
| MS.gene62984.t1 | AT1G77110 | 47.697 | 608 | 249 | 15 | 1 | 599 | 1 | 548 | 1.02e-167 | 489 |
| MS.gene62984.t1 | AT5G15100 | 62.805 | 164 | 61 | 0 | 458 | 621 | 204 | 367 | 8.11e-61 | 207 |
| MS.gene62984.t1 | AT5G15100 | 49.153 | 177 | 80 | 2 | 1 | 172 | 1 | 172 | 1.04e-44 | 163 |
| MS.gene62984.t1 | AT5G16530 | 54.000 | 150 | 69 | 0 | 467 | 616 | 195 | 344 | 7.14e-51 | 179 |
| MS.gene62984.t1 | AT5G16530 | 52.229 | 157 | 75 | 0 | 1 | 157 | 1 | 157 | 1.04e-49 | 176 |
| MS.gene62984.t1 | AT5G16530 | 52.229 | 157 | 75 | 0 | 1 | 157 | 1 | 157 | 3.15e-50 | 177 |
| MS.gene62984.t1 | AT5G16530 | 51.825 | 137 | 66 | 0 | 464 | 600 | 192 | 328 | 3.13e-43 | 158 |
Find 174 sgRNAs with CRISPR-Local
Find 304 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGCTTCCATCGTTTCCTTTA+AGG | 0.041816 | 1.3:-16621155 | MS.gene62984:CDS |
| CAACCAAGACATTCCAATTT+TGG | 0.071341 | 1.3:-16620899 | MS.gene62984:CDS |
| TTGAATTGCAGGGTTATATT+TGG | 0.190580 | 1.3:-16617346 | MS.gene62984:intron |
| ATTATATTTAGGTCTGTTTA+TGG | 0.191838 | 1.3:-16618480 | MS.gene62984:intron |
| CAAGTCTCATTGGTCTTATT+TGG | 0.200411 | 1.3:-16619795 | MS.gene62984:CDS |
| ATTGCCTATACCTTTGTTAT+TGG | 0.219936 | 1.3:+16620481 | None:intergenic |
| CCGCGACTCCGGTGGCTTTA+GGG | 0.226606 | 1.3:+16619917 | None:intergenic |
| TCCGCGACTCCGGTGGCTTT+AGG | 0.232306 | 1.3:+16619916 | None:intergenic |
| AATCTGAAGTTCATTTGATA+TGG | 0.240310 | 1.3:+16621472 | None:intergenic |
| AACATCCGAATCAACCTTAA+AGG | 0.260890 | 1.3:+16621141 | None:intergenic |
| CTTCTGACTGTTCCGAATTT+CGG | 0.260993 | 1.3:+16620561 | None:intergenic |
| CAAATCATTAGCCCCAAAAT+TGG | 0.264008 | 1.3:+16620886 | None:intergenic |
| CCTTCAAATTTCGAAGAAAA+TGG | 0.266779 | 1.3:-16620824 | MS.gene62984:CDS |
| CTTCCTAACACTTTGGTTAT+GGG | 0.267472 | 1.3:-16621334 | MS.gene62984:CDS |
| ACTTCCTAACACTTTGGTTA+TGG | 0.272014 | 1.3:-16621335 | MS.gene62984:CDS |
| CTCAAGTGCTTCGCCGGTTT+CGG | 0.282268 | 1.3:-16620606 | MS.gene62984:CDS |
| ATGTAGTAGAGTAGAGTAAT+TGG | 0.282953 | 1.3:+16617307 | None:intergenic |
| GACACGTCTCATACTCATTA+TGG | 0.285664 | 1.3:-16619854 | MS.gene62984:CDS |
| GTTCATTTGATATGGATTAT+TGG | 0.294822 | 1.3:+16621480 | None:intergenic |
| GGTGCAAGTTCTCCTAGATT+TGG | 0.301908 | 1.3:-16620803 | MS.gene62984:CDS |
| TTGAATAAGTGTTTGGATTA+CGG | 0.310783 | 1.3:+16619815 | None:intergenic |
| TTAGTAGTAGAGGAGAATTC+CGG | 0.312645 | 1.3:+16620731 | None:intergenic |
| TGATTATTCAGGTAGCTTAA+TGG | 0.316996 | 1.3:-16621284 | MS.gene62984:CDS |
| TTTGGTCCCTTGTTGCCTTT+AGG | 0.319465 | 1.3:-16619777 | MS.gene62984:intron |
| GCTATGTATGGTGATTATTC+AGG | 0.323216 | 1.3:-16621295 | MS.gene62984:CDS |
| CCTTACTGGTCCAGCAGTTA+TGG | 0.341147 | 1.3:-16618393 | MS.gene62984:CDS |
| GAATTCGAGCCCAACTTGTT+AGG | 0.341677 | 1.3:+16619955 | None:intergenic |
| GTGCAAGTTCTCCTAGATTT+GGG | 0.353225 | 1.3:-16620802 | MS.gene62984:CDS |
| TTCTCACCGGATCAATGTTC+CGG | 0.355844 | 1.3:-16621562 | MS.gene62984:CDS |
| ATGAGACTTGAATAAGTGTT+TGG | 0.358805 | 1.3:+16619808 | None:intergenic |
| AAGATCATAGCAACATATAA+TGG | 0.361273 | 1.3:+16621616 | None:intergenic |
| TCGGATGTTATGTCGTTAGA+TGG | 0.361380 | 1.3:-16621127 | MS.gene62984:CDS |
| CCTCAACGTGTTCCGAAATT+CGG | 0.365682 | 1.3:-16620573 | MS.gene62984:CDS |
| CGTTTCCTTTAAGGTTGATT+CGG | 0.369573 | 1.3:-16621146 | MS.gene62984:CDS |
| ATTCCCACATGCAATGATCT+TGG | 0.369808 | 1.3:+16618448 | None:intergenic |
| GGAAGTTACATGTTACTGTT+AGG | 0.381177 | 1.3:-16621063 | MS.gene62984:CDS |
| CCTGCATGTAGCTATTGTTC+AGG | 0.382242 | 1.3:-16618333 | MS.gene62984:intron |
| TTTGGCACCGGATACGAATT+AGG | 0.387532 | 1.3:+16620755 | None:intergenic |
| AACACTTATTCAAGTCTCAT+TGG | 0.389053 | 1.3:-16619805 | MS.gene62984:CDS |
| GGTGGTCAAGAAAAGGAAAT+TGG | 0.389811 | 1.3:-16620042 | MS.gene62984:CDS |
| GCTGATGAACATAATCAAAA+TGG | 0.390186 | 1.3:-16620509 | MS.gene62984:CDS |
| ACGATGGAAGCCGCGGTCTC+TGG | 0.390787 | 1.3:+16621166 | None:intergenic |
| ATACTGTCTGATGCTGGTCT+TGG | 0.394410 | 1.3:-16619526 | MS.gene62984:CDS |
| GCCCAACTTGTTAGGTCCAT+TGG | 0.399378 | 1.3:+16619963 | None:intergenic |
| AGGCCAGCACTTTCCGAAAC+CGG | 0.400302 | 1.3:+16620593 | None:intergenic |
| GTCTCATACTCATTATGGTT+TGG | 0.406117 | 1.3:-16619849 | MS.gene62984:CDS |
| ATTCCCATAACCAAAGTGTT+AGG | 0.414160 | 1.3:+16621331 | None:intergenic |
| TGGTTCTTCAGTGTATCATT+TGG | 0.415072 | 1.3:-16621252 | MS.gene62984:CDS |
| TGCTAGTAGCACTTTCACTA+TGG | 0.415298 | 1.3:-16621417 | MS.gene62984:CDS |
| AAGACCAGCATCAGACAGTA+TGG | 0.415534 | 1.3:+16619528 | None:intergenic |
| ATGGCTATAAGATTCCTTAC+TGG | 0.418097 | 1.3:-16618407 | MS.gene62984:CDS |
| CTACTCTACTACATTCTCCT+TGG | 0.419596 | 1.3:-16617298 | MS.gene62984:CDS |
| GTAGAGGAGAATTCCGGGTT+TGG | 0.423859 | 1.3:+16620737 | None:intergenic |
| TAGTAGTAGAGGAGAATTCC+GGG | 0.437495 | 1.3:+16620732 | None:intergenic |
| TTCTGTTGCTTCATTTGCCA+TGG | 0.440626 | 1.3:-16618426 | MS.gene62984:CDS |
| GCCCCAAAATTGGAATGTCT+TGG | 0.443621 | 1.3:+16620896 | None:intergenic |
| TTCCCACATGCAATGATCTT+GGG | 0.445777 | 1.3:+16618449 | None:intergenic |
| ATTGCAGACAAAAGGTTCTC+AGG | 0.450066 | 1.3:-16620657 | MS.gene62984:CDS |
| TTAGGCACAGTTTGCGCTGC+CGG | 0.451420 | 1.3:+16620773 | None:intergenic |
| TCTTCGAAATTTGAAGGTCT+AGG | 0.454518 | 1.3:+16620830 | None:intergenic |
| CCTTTGTTAATTGCTATGTA+TGG | 0.454996 | 1.3:-16621307 | MS.gene62984:CDS |
| AGGATCAAATTTCAACCATC+AGG | 0.456670 | 1.3:-16620945 | MS.gene62984:CDS |
| TCGCCGGTTTCGGAAAGTGC+TGG | 0.458059 | 1.3:-16620596 | MS.gene62984:CDS |
| CCCAACTTGTTAGGTCCATT+GGG | 0.459861 | 1.3:+16619964 | None:intergenic |
| CAGGTTCAATTGCAGACAAA+AGG | 0.466019 | 1.3:-16620665 | MS.gene62984:CDS |
| AAGAGGACTTCAAGTTCAAT+GGG | 0.468366 | 1.3:-16620014 | MS.gene62984:CDS |
| GTGGAGCTCAAGTGCTTCGC+CGG | 0.468410 | 1.3:-16620612 | MS.gene62984:CDS |
| GCCGGATAAAACCCAAATCT+AGG | 0.472038 | 1.3:+16620791 | None:intergenic |
| CCTACGGTTCGGTCCGTTGG+TGG | 0.474399 | 1.3:-16621591 | MS.gene62984:CDS |
| ATCAACACTTCCTAACACTT+TGG | 0.475928 | 1.3:-16621341 | MS.gene62984:CDS |
| TGCTTACGCTGTACTAAGAA+TGG | 0.477801 | 1.3:+16617467 | None:intergenic |
| CTTCACAGGTTTAGTAGTAG+AGG | 0.477907 | 1.3:+16620721 | None:intergenic |
| GGAATGGCTATGTTTAGCTT+AGG | 0.479154 | 1.3:-16619505 | MS.gene62984:intron |
| TTCGTATCCGGTGCCAAACC+CGG | 0.479487 | 1.3:-16620750 | MS.gene62984:CDS |
| TAGCCTACGGTTCGGTCCGT+TGG | 0.480227 | 1.3:-16621594 | MS.gene62984:CDS |
| CCGAATTTCGGAACACGTTG+AGG | 0.481444 | 1.3:+16620573 | None:intergenic |
| TAGCTTAATGGTTCAAGTTG+TGG | 0.483646 | 1.3:-16621272 | MS.gene62984:CDS |
| AAAGGAAATTGGTGGGGAAG+AGG | 0.484370 | 1.3:-16620031 | MS.gene62984:CDS |
| AACTGTGCCTAATTCGTATC+CGG | 0.489229 | 1.3:-16620762 | MS.gene62984:CDS |
| AATTGAAGGTGGTCAAGAAA+AGG | 0.491402 | 1.3:-16620049 | MS.gene62984:intron |
| CCCAATGGACCTAACAAGTT+GGG | 0.493053 | 1.3:-16619964 | MS.gene62984:CDS |
| GAAGAGGACTTCAAGTTCAA+TGG | 0.495292 | 1.3:-16620015 | MS.gene62984:CDS |
| GATGCATCAGTTGGTGATGA+TGG | 0.503763 | 1.3:-16621085 | MS.gene62984:CDS |
| CTTGAAACTGATGCATCAGT+TGG | 0.511837 | 1.3:-16621094 | MS.gene62984:CDS |
| TCAGCTCCAGTCAAATTTGA+CGG | 0.512431 | 1.3:+16620995 | None:intergenic |
| CGCGACAAAACGGTTTATAC+CGG | 0.513768 | 1.3:+16621543 | None:intergenic |
| AAATTTGAAGGTCTAGGAGT+TGG | 0.515304 | 1.3:+16620836 | None:intergenic |
| TACGCTGTACTAAGAATGGC+TGG | 0.515311 | 1.3:+16617471 | None:intergenic |
| GAAGCTGCTGCCATAACTGC+TGG | 0.516874 | 1.3:+16618383 | None:intergenic |
| GAGAATTCCGGGTTTGGCAC+CGG | 0.521354 | 1.3:+16620743 | None:intergenic |
| CCCTAAAGCCACCGGAGTCG+CGG | 0.523391 | 1.3:-16619917 | MS.gene62984:CDS |
| CCGCGACCGTCAAATTTGAC+TGG | 0.525623 | 1.3:-16621001 | MS.gene62984:CDS |
| TTGAGATGAAGTGGAAGGAA+AGG | 0.528570 | 1.3:+16621503 | None:intergenic |
| TCTGTCCAGTCTTCTTCTAG+AGG | 0.530364 | 1.3:-16620860 | MS.gene62984:CDS |
| TCTATCGCCGTTGGCCTCCG+TGG | 0.532052 | 1.3:-16618362 | MS.gene62984:CDS |
| CGGCGAAAACCGCGACAAAA+CGG | 0.532255 | 1.3:+16621533 | None:intergenic |
| GTCTGATGCTGGTCTTGGAA+TGG | 0.532632 | 1.3:-16619521 | MS.gene62984:CDS |
| ACAGTCAGAAGAGGGTGCTA+AGG | 0.534163 | 1.3:-16620549 | MS.gene62984:CDS |
| TTGGTCCTCTAGAAGAAGAC+TGG | 0.534857 | 1.3:+16620855 | None:intergenic |
| AGTAGAGTAGAGTAATTGGA+AGG | 0.536719 | 1.3:+16617311 | None:intergenic |
| ATTTCCATACTGTCTGATGC+TGG | 0.538744 | 1.3:-16619532 | MS.gene62984:CDS |
| CTATCGCCGTTGGCCTCCGT+GGG | 0.540857 | 1.3:-16618361 | MS.gene62984:CDS |
| ACCCAATGGACCTAACAAGT+TGG | 0.543856 | 1.3:-16619965 | MS.gene62984:CDS |
| CCATAACTGCTGGACCAGTA+AGG | 0.545402 | 1.3:+16618393 | None:intergenic |
| GAGGGTCCCACGGAGGCCAA+CGG | 0.549364 | 1.3:+16618355 | None:intergenic |
| GACACTTGAATCCGCGACTC+CGG | 0.551443 | 1.3:+16619906 | None:intergenic |
| TCTTGGTTGATAACCCATCA+TGG | 0.553358 | 1.3:+16620913 | None:intergenic |
| GTGGCTTTAGGGTGGAGCTC+CGG | 0.554827 | 1.3:+16619928 | None:intergenic |
| GCAGCAGCTTCTATCGCCGT+TGG | 0.558133 | 1.3:-16618371 | MS.gene62984:CDS |
| TTTGATGCCGCAACAACCGC+AGG | 0.558725 | 1.3:-16620684 | MS.gene62984:CDS |
| TTTATACCGGAACATTGATC+CGG | 0.563096 | 1.3:+16621556 | None:intergenic |
| TATGATCTTAGCCTACGGTT+CGG | 0.565033 | 1.3:-16621602 | MS.gene62984:CDS |
| TGTCGGAAAACTCATGCCTC+CGG | 0.565467 | 1.3:-16619887 | MS.gene62984:CDS |
| CCAGTCAAATTTGACGGTCG+CGG | 0.567450 | 1.3:+16621001 | None:intergenic |
| GTCAAGAAAAGGAAATTGGT+GGG | 0.568661 | 1.3:-16620038 | MS.gene62984:CDS |
| GATTATTGGTTGAGATGAAG+TGG | 0.571087 | 1.3:+16621494 | None:intergenic |
| CTTCAAGTTCAATGGGGTGA+AGG | 0.574592 | 1.3:-16620007 | MS.gene62984:CDS |
| GAAATTTGATCCTCTAGGTG+TGG | 0.579820 | 1.3:+16620955 | None:intergenic |
| ATTGGTTGAGATGAAGTGGA+AGG | 0.580504 | 1.3:+16621498 | None:intergenic |
| GAGCTCCACCCTAAAGCCAC+CGG | 0.581241 | 1.3:-16619925 | MS.gene62984:CDS |
| CAATAGGCTGCACTTCCACA+AGG | 0.583775 | 1.3:-16617534 | MS.gene62984:intron |
| ACTTGAATCCGCGACTCCGG+TGG | 0.585921 | 1.3:+16619909 | None:intergenic |
| AAGTTCAATGGGGTGAAGGT+AGG | 0.588094 | 1.3:-16620003 | MS.gene62984:CDS |
| GAACAAGGAGAAGGACCCAA+TGG | 0.588943 | 1.3:-16619979 | MS.gene62984:CDS |
| GTGGAAGGAAAGGAGAGGTA+CGG | 0.589497 | 1.3:+16621513 | None:intergenic |
| CTGTACTAAGAATGGCTGGA+TGG | 0.589732 | 1.3:+16617475 | None:intergenic |
| AGTAAGGAATCTTATAGCCA+TGG | 0.592444 | 1.3:+16618409 | None:intergenic |
| GGGGTGAAGGTAGGAGAACA+AGG | 0.592671 | 1.3:-16619994 | MS.gene62984:CDS |
| CTACATGCAGGAGGGTCCCA+CGG | 0.593506 | 1.3:+16618345 | None:intergenic |
| CCTGAACAATAGCTACATGC+AGG | 0.595131 | 1.3:+16618333 | None:intergenic |
| GTAGAGTAGAGTAATTGGAA+GGG | 0.595548 | 1.3:+16617312 | None:intergenic |
| TTACACTGTCTTAACAGCAG+TGG | 0.596282 | 1.3:-16621641 | MS.gene62984:CDS |
| ATGCATCAGTTGGTGATGAT+GGG | 0.598176 | 1.3:-16621084 | MS.gene62984:CDS |
| TCATGGAGTAAAACTCCTGA+TGG | 0.598436 | 1.3:+16620930 | None:intergenic |
| GTTGCTATGATCTTAGCCTA+CGG | 0.598914 | 1.3:-16621607 | MS.gene62984:CDS |
| AATTGAACCTGCGGTTGTTG+CGG | 0.599082 | 1.3:+16620677 | None:intergenic |
| AGACGTGTCATGACGCTCGC+CGG | 0.600055 | 1.3:+16619868 | None:intergenic |
| CAACCCAAGATCATTGCATG+TGG | 0.601268 | 1.3:-16618452 | MS.gene62984:CDS |
| ATCAACCTTAAAGGAAACGA+TGG | 0.602614 | 1.3:+16621150 | None:intergenic |
| CGACTCCGGTGGCTTTAGGG+TGG | 0.603330 | 1.3:+16619920 | None:intergenic |
| ATGAAGTGGAAGGAAAGGAG+AGG | 0.606551 | 1.3:+16621508 | None:intergenic |
| AAGGTAGGAGAACAAGGAGA+AGG | 0.608019 | 1.3:-16619988 | MS.gene62984:CDS |
| GGTCAAGAAAAGGAAATTGG+TGG | 0.613131 | 1.3:-16620039 | MS.gene62984:CDS |
| ATACCTACCTAAAGGCAACA+AGG | 0.617062 | 1.3:+16619770 | None:intergenic |
| AATTCGGAACAGTCAGAAGA+GGG | 0.617187 | 1.3:-16620557 | MS.gene62984:CDS |
| GGAGTCGCGGATTCAAGTGT+CGG | 0.620160 | 1.3:-16619904 | MS.gene62984:CDS |
| TACCTACCTAAAGGCAACAA+GGG | 0.621757 | 1.3:+16619771 | None:intergenic |
| CCACCAACGGACCGAACCGT+AGG | 0.627762 | 1.3:+16621591 | None:intergenic |
| GGGTGCTAAGGAGATCAGAA+TGG | 0.627824 | 1.3:-16620537 | MS.gene62984:CDS |
| AATGGTGAAACCAATAACAA+AGG | 0.629421 | 1.3:-16620491 | MS.gene62984:intron |
| AAATTCGGAACAGTCAGAAG+AGG | 0.630925 | 1.3:-16620558 | MS.gene62984:CDS |
| TTTGTCTGCAATTGAACCTG+CGG | 0.633224 | 1.3:+16620668 | None:intergenic |
| AAGAGTTGCATATGTTTGTG+TGG | 0.633927 | 1.3:-16620631 | MS.gene62984:CDS |
| GAACAATAGCTACATGCAGG+AGG | 0.636996 | 1.3:+16618336 | None:intergenic |
| CGTGTCATGACGCTCGCCGG+AGG | 0.639607 | 1.3:+16619871 | None:intergenic |
| GTGAGAAAATCTTCCACCAA+CGG | 0.645716 | 1.3:+16621578 | None:intergenic |
| TAAGGAGATCAGAATGGTGG+TGG | 0.649271 | 1.3:-16620531 | MS.gene62984:CDS |
| AACAATAGCTACATGCAGGA+GGG | 0.650303 | 1.3:+16618337 | None:intergenic |
| TGGTTGAAATTTGATCCTCT+AGG | 0.655872 | 1.3:+16620950 | None:intergenic |
| AACCCAAGATCATTGCATGT+GGG | 0.657323 | 1.3:-16618451 | MS.gene62984:CDS |
| TCAAGAAAAGGAAATTGGTG+GGG | 0.659437 | 1.3:-16620037 | MS.gene62984:CDS |
| AAAGGAAACGATGGAAGCCG+CGG | 0.662228 | 1.3:+16621159 | None:intergenic |
| AGTCTCAGCTCCACACCTAG+AGG | 0.665724 | 1.3:-16620965 | MS.gene62984:CDS |
| TGCTAAGGAGATCAGAATGG+TGG | 0.667487 | 1.3:-16620534 | MS.gene62984:CDS |
| TTAGGAAGTCTAACGCGTCG+CGG | 0.669107 | 1.3:-16621045 | MS.gene62984:CDS |
| GGAGCAGTTTCCAGAGACCG+CGG | 0.671808 | 1.3:-16621176 | MS.gene62984:CDS |
| ACAAATGGAACAATCCCTTG+TGG | 0.676637 | 1.3:+16617519 | None:intergenic |
| TGATTAAAAGCTTAGCACCA+CGG | 0.678635 | 1.3:+16621200 | None:intergenic |
| CCATACATAGCAATTAACAA+AGG | 0.679313 | 1.3:+16621307 | None:intergenic |
| GGAAGTCTAACGCGTCGCGG+AGG | 0.686204 | 1.3:-16621042 | MS.gene62984:CDS |
| AATAGGCTGCACTTCCACAA+GGG | 0.700469 | 1.3:-16617533 | MS.gene62984:intron |
| CATGCAGGAGGGTCCCACGG+AGG | 0.710876 | 1.3:+16618348 | None:intergenic |
| GTTGGGCTCGAATTCAACGC+CGG | 0.711535 | 1.3:-16619947 | MS.gene62984:CDS |
| AGAGGACTTCAAGTTCAATG+GGG | 0.771569 | 1.3:-16620013 | MS.gene62984:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAAAAATTAAAAGAAGTT+TGG | - | chr1.3:16619250-16619269 | MS.gene62984:intron | 10.0% |
| !! | ATAAAAGAAAATTAGTATAT+AGG | + | chr1.3:16619925-16619944 | None:intergenic | 10.0% |
| !! | CATATTTGTTTATTATATTT+AGG | - | chr1.3:16620461-16620480 | MS.gene62984:intron | 10.0% |
| !! | TAATTTAATTCTAATATAGT+TGG | - | chr1.3:16618666-16618685 | MS.gene62984:intron | 10.0% |
| !!! | ATGTTGATAATTATAAAAAA+AGG | - | chr1.3:16619578-16619597 | MS.gene62984:intron | 10.0% |
| !! | ATGTGATTGAAAAATAAATA+AGG | + | chr1.3:16621520-16621539 | None:intergenic | 15.0% |
| !! | ATTCATTTGTCTTAAATTAT+TGG | + | chr1.3:16620348-16620367 | None:intergenic | 15.0% |
| !! | TTAGAAATATATCAACAAAA+GGG | + | chr1.3:16620320-16620339 | None:intergenic | 15.0% |
| !! | TTGTTAAATTAATCTAACAA+CGG | - | chr1.3:16618616-16618635 | MS.gene62984:intron | 15.0% |
| !! | TTGTTAGATTAATTTAACAA+CGG | + | chr1.3:16618616-16618635 | None:intergenic | 15.0% |
| !! | TTTAGAAATATATCAACAAA+AGG | + | chr1.3:16620321-16620340 | None:intergenic | 15.0% |
| !!! | ATTGATTTCTCTATTATTTT+AGG | + | chr1.3:16619402-16619421 | None:intergenic | 15.0% |
| !!! | TTGATAATTATAAAAAAAGG+TGG | - | chr1.3:16619581-16619600 | MS.gene62984:intron | 15.0% |
| !!! | TTTTTATAAATTGAATTGCA+GGG | - | chr1.3:16621596-16621615 | MS.gene62984:CDS | 15.0% |
| !!! | TTTTTTATAAATTGAATTGC+AGG | - | chr1.3:16621595-16621614 | MS.gene62984:CDS | 15.0% |
| !! | AAAGAAGAATAAACAAAATG+AGG | + | chr1.3:16620411-16620430 | None:intergenic | 20.0% |
| !! | ACAAAACATGATAATATTGA+AGG | - | chr1.3:16621350-16621369 | MS.gene62984:CDS | 20.0% |
| !! | AGTTATGTAACTATTATTGT+TGG | - | chr1.3:16619345-16619364 | MS.gene62984:intron | 20.0% |
| !! | ATTATATTTAGGTCTGTTTA+TGG | - | chr1.3:16620472-16620491 | MS.gene62984:intron | 20.0% |
| !! | GAAATCTTTGTTAATTAAAG+TGG | - | chr1.3:16620076-16620095 | MS.gene62984:intron | 20.0% |
| !! | GTAATGATAAGTTTCTAATT+TGG | - | chr1.3:16618877-16618896 | MS.gene62984:intron | 20.0% |
| !! | GTATTCCATTAAATTTACTT+AGG | + | chr1.3:16621189-16621208 | None:intergenic | 20.0% |
| !! | TGAATCCTAAGTAAATTTAA+TGG | - | chr1.3:16621181-16621200 | MS.gene62984:CDS | 20.0% |
| !! | TTCTAATTTGGTTAAATTGA+AGG | - | chr1.3:16618889-16618908 | MS.gene62984:intron | 20.0% |
| !! | TTGTTAATTAAAGTGGTTAA+TGG | - | chr1.3:16620083-16620102 | MS.gene62984:intron | 20.0% |
| !!! | AATAAGTTTTATAACACTTG+AGG | + | chr1.3:16620190-16620209 | None:intergenic | 20.0% |
| !!! | AATGATTAGTCATTGATTAA+AGG | - | chr1.3:16618771-16618790 | MS.gene62984:intron | 20.0% |
| !!! | ATATTATCATGTTTTGTGAT+AGG | + | chr1.3:16621347-16621366 | None:intergenic | 20.0% |
| !!! | ATTTTAAATTGCACTTTAGA+CGG | - | chr1.3:16618526-16618545 | MS.gene62984:intron | 20.0% |
| !!! | TGTTTATTCTTCTTTTTCTA+AGG | - | chr1.3:16620416-16620435 | MS.gene62984:intron | 20.0% |
| ! | AAAAATGCGACACTTATTAT+GGG | + | chr1.3:16620247-16620266 | None:intergenic | 25.0% |
| ! | AAGAATTATTGAGGAGAAAT+TGG | + | chr1.3:16619497-16619516 | None:intergenic | 25.0% |
| ! | AAGATCATAGCAACATATAA+TGG | + | chr1.3:16617339-16617358 | None:intergenic | 25.0% |
| ! | AATTATGAGAAAATCTTGTG+TGG | - | chr1.3:16620794-16620813 | MS.gene62984:CDS | 25.0% |
| ! | ACTTTATAATACCTACCTAA+AGG | + | chr1.3:16619193-16619212 | None:intergenic | 25.0% |
| ! | ATGTGATAGAAGAATTATTG+AGG | + | chr1.3:16619506-16619525 | None:intergenic | 25.0% |
| ! | CGAGTTAATTATAGTTACAA+CGG | - | chr1.3:16618562-16618581 | MS.gene62984:intron | 25.0% |
| ! | CTAAAAATGGCAATTTAGAA+TGG | - | chr1.3:16617568-16617587 | MS.gene62984:intron | 25.0% |
| ! | GTATGAATATGAGAAAAGTA+TGG | - | chr1.3:16619661-16619680 | MS.gene62984:intron | 25.0% |
| ! | GTTATGAGATTGTTAACTTA+TGG | - | chr1.3:16621376-16621395 | MS.gene62984:CDS | 25.0% |
| ! | GTTTAAATTTGCAACTAAGA+CGG | + | chr1.3:16620120-16620139 | None:intergenic | 25.0% |
| ! | TAAAAATGCGACACTTATTA+TGG | + | chr1.3:16620248-16620267 | None:intergenic | 25.0% |
| ! | TAATTTGGTTAAATTGAAGG+TGG | - | chr1.3:16618892-16618911 | MS.gene62984:intron | 25.0% |
| ! | TGGTAGTAAAGTAAAATGAA+TGG | - | chr1.3:16619601-16619620 | MS.gene62984:intron | 25.0% |
| ! | TGTAGCTCATATAGTTAAAA+AGG | + | chr1.3:16621103-16621122 | None:intergenic | 25.0% |
| ! | TGTCAATAAGCATTTCTATT+TGG | - | chr1.3:16621244-16621263 | MS.gene62984:CDS | 25.0% |
| ! | TTCTTTATTCAGTGTCTATT+GGG | + | chr1.3:16620764-16620783 | None:intergenic | 25.0% |
| ! | TTGAATAAGTGTTTGGATTA+CGG | + | chr1.3:16619140-16619159 | None:intergenic | 25.0% |
| ! | TTGGTGCAATTTAATAATCA+AGG | - | chr1.3:16618685-16618704 | MS.gene62984:intron | 25.0% |
| !! | AAGGTAACGTAGTTTAAAAT+TGG | + | chr1.3:16619820-16619839 | None:intergenic | 25.0% |
| !! | AATCTGAAGTTCATTTGATA+TGG | + | chr1.3:16617483-16617502 | None:intergenic | 25.0% |
| !! | AGGTAACGTAGTTTAAAATT+GGG | + | chr1.3:16619819-16619838 | None:intergenic | 25.0% |
| !! | ATATGAGAAAAGTATGGATT+TGG | - | chr1.3:16619667-16619686 | MS.gene62984:intron | 25.0% |
| !! | ATGATTGAATTTGAGAGTAT+GGG | - | chr1.3:16619635-16619654 | MS.gene62984:intron | 25.0% |
| !! | GTTCATTTGATATGGATTAT+TGG | + | chr1.3:16617475-16617494 | None:intergenic | 25.0% |
| !! | TATGAGAAAAGTATGGATTT+GGG | - | chr1.3:16619668-16619687 | MS.gene62984:intron | 25.0% |
| !!! | TTTTTTAAATATCGGAGAAG+TGG | - | chr1.3:16620052-16620071 | MS.gene62984:intron | 25.0% |
| AACAAACATCACCAAGATAA+TGG | + | chr1.3:16619723-16619742 | None:intergenic | 30.0% | |
| AACACTTATTCAAGTCTCAT+TGG | - | chr1.3:16619147-16619166 | MS.gene62984:intron | 30.0% | |
| AACCATAGTGGTTGAAATAA+TGG | - | chr1.3:16619888-16619907 | MS.gene62984:CDS | 30.0% | |
| AATGGTGAAACCAATAACAA+AGG | - | chr1.3:16618461-16618480 | MS.gene62984:CDS | 30.0% | |
| ACTCTCAAATTCAATCATGT+TGG | + | chr1.3:16619633-16619652 | None:intergenic | 30.0% | |
| AGGTTTAATCTTAGAACCAA+TGG | + | chr1.3:16618719-16618738 | None:intergenic | 30.0% | |
| ATATCAACAAAAGGGTAAAG+TGG | + | chr1.3:16620312-16620331 | None:intergenic | 30.0% | |
| ATGAGACTTGAATAAGTGTT+TGG | + | chr1.3:16619147-16619166 | None:intergenic | 30.0% | |
| ATGTAGTAGAGTAGAGTAAT+TGG | + | chr1.3:16621648-16621667 | None:intergenic | 30.0% | |
| CATGATTGAATTTGAGAGTA+TGG | - | chr1.3:16619634-16619653 | MS.gene62984:intron | 30.0% | |
| CCATACATAGCAATTAACAA+AGG | + | chr1.3:16617648-16617667 | None:intergenic | 30.0% | |
| CCTTCAAATTTCGAAGAAAA+TGG | - | chr1.3:16618128-16618147 | MS.gene62984:intron | 30.0% | |
| CCTTTGTTAATTGCTATGTA+TGG | - | chr1.3:16617645-16617664 | MS.gene62984:intron | 30.0% | |
| CTTCTTTATTCAGTGTCTAT+TGG | + | chr1.3:16620765-16620784 | None:intergenic | 30.0% | |
| GCTGATGAACATAATCAAAA+TGG | - | chr1.3:16618443-16618462 | MS.gene62984:CDS | 30.0% | |
| TCAACCACTATGGTTAATTA+GGG | + | chr1.3:16619883-16619902 | None:intergenic | 30.0% | |
| TCTTTATTCAGTGTCTATTG+GGG | + | chr1.3:16620763-16620782 | None:intergenic | 30.0% | |
| TGATTATTCAGGTAGCTTAA+TGG | - | chr1.3:16617668-16617687 | MS.gene62984:intron | 30.0% | |
| TGGACATTGTTCACTAAAAA+TGG | - | chr1.3:16617555-16617574 | MS.gene62984:intron | 30.0% | |
| TTAAACCTAGTATATTCCGA+AGG | - | chr1.3:16618731-16618750 | MS.gene62984:intron | 30.0% | |
| TTCAACCACTATGGTTAATT+AGG | + | chr1.3:16619884-16619903 | None:intergenic | 30.0% | |
| TTCCATTATTTCAACCACTA+TGG | + | chr1.3:16619893-16619912 | None:intergenic | 30.0% | |
| TTGAATTGCAGGGTTATATT+TGG | - | chr1.3:16621606-16621625 | MS.gene62984:CDS | 30.0% | |
| TTGAGGAGAAATTGGATAAA+TGG | + | chr1.3:16619489-16619508 | None:intergenic | 30.0% | |
| ! | AACCAAGACATTCCAATTTT+GGG | - | chr1.3:16618054-16618073 | MS.gene62984:intron | 30.0% |
| ! | ACTTATGGTAATGAATGTTG+TGG | - | chr1.3:16621391-16621410 | MS.gene62984:CDS | 30.0% |
| ! | ATGAGAAAAGTATGGATTTG+GGG | - | chr1.3:16619669-16619688 | MS.gene62984:intron | 30.0% |
| ! | ATTGCCTATACCTTTGTTAT+TGG | + | chr1.3:16618474-16618493 | None:intergenic | 30.0% |
| ! | CCATTTTCTTCGAAATTTGA+AGG | + | chr1.3:16618131-16618150 | None:intergenic | 30.0% |
| ! | GAAACCAATAACAAAGGTAT+AGG | - | chr1.3:16618467-16618486 | MS.gene62984:CDS | 30.0% |
| ! | TAACAAAGGTATAGGCAATT+AGG | - | chr1.3:16618475-16618494 | MS.gene62984:intron | 30.0% |
| ! | TACTCTTTTGCAAACACAAA+TGG | + | chr1.3:16621451-16621470 | None:intergenic | 30.0% |
| !! | GAGAATGGATTAGCATATAT+TGG | + | chr1.3:16621270-16621289 | None:intergenic | 30.0% |
| !! | TTTTGATTCTGATTCTTCAC+AGG | + | chr1.3:16618248-16618267 | None:intergenic | 30.0% |
| !!! | TAAGGTTTAGTTTTACAGCT+TGG | - | chr1.3:16620434-16620453 | MS.gene62984:intron | 30.0% |
| AAATTTGAAGGTCTAGGAGT+TGG | + | chr1.3:16618119-16618138 | None:intergenic | 35.0% | |
| AACATCCGAATCAACCTTAA+AGG | + | chr1.3:16617814-16617833 | None:intergenic | 35.0% | |
| AAGAGAGAAGAGAGAGAAAA+TGG | - | chr1.3:16620873-16620892 | MS.gene62984:CDS | 35.0% | |
| AAGAGTTGCATATGTTTGTG+TGG | - | chr1.3:16618321-16618340 | MS.gene62984:intron | 35.0% | |
| AATTGAAGGTGGTCAAGAAA+AGG | - | chr1.3:16618903-16618922 | MS.gene62984:intron | 35.0% | |
| ACTTCCTAACACTTTGGTTA+TGG | - | chr1.3:16617617-16617636 | MS.gene62984:intron | 35.0% | |
| AGACACTGAATAAAGAAGAG+TGG | - | chr1.3:16620767-16620786 | MS.gene62984:CDS | 35.0% | |
| AGGATCAAATTTCAACCATC+AGG | - | chr1.3:16618007-16618026 | MS.gene62984:intron | 35.0% | |
| AGTAAGGAATCTTATAGCCA+TGG | + | chr1.3:16620546-16620565 | None:intergenic | 35.0% | |
| AGTAGAGTAGAGTAATTGGA+AGG | + | chr1.3:16621644-16621663 | None:intergenic | 35.0% | |
| ATCAACACTTCCTAACACTT+TGG | - | chr1.3:16617611-16617630 | MS.gene62984:intron | 35.0% | |
| ATCAACCTTAAAGGAAACGA+TGG | + | chr1.3:16617805-16617824 | None:intergenic | 35.0% | |
| ATGGCTATAAGATTCCTTAC+TGG | - | chr1.3:16620545-16620564 | MS.gene62984:CDS | 35.0% | |
| ATTTAACAACGGAGATGTAG+TGG | + | chr1.3:16618605-16618624 | None:intergenic | 35.0% | |
| ATTTGTGAGAAACACTTGTG+TGG | + | chr1.3:16620972-16620991 | None:intergenic | 35.0% | |
| CAAATCATTAGCCCCAAAAT+TGG | + | chr1.3:16618069-16618088 | None:intergenic | 35.0% | |
| CACATCAAGTACGAAAAAAG+AGG | - | chr1.3:16621030-16621049 | MS.gene62984:CDS | 35.0% | |
| CTTCCTAACACTTTGGTTAT+GGG | - | chr1.3:16617618-16617637 | MS.gene62984:intron | 35.0% | |
| GCTATGTATGGTGATTATTC+AGG | - | chr1.3:16617657-16617676 | MS.gene62984:intron | 35.0% | |
| GGAAGTTACATGTTACTGTT+AGG | - | chr1.3:16617889-16617908 | MS.gene62984:intron | 35.0% | |
| GTAGAGTAGAGTAATTGGAA+GGG | + | chr1.3:16621643-16621662 | None:intergenic | 35.0% | |
| GTCAAGAAAAGGAAATTGGT+GGG | - | chr1.3:16618914-16618933 | MS.gene62984:intron | 35.0% | |
| GTCTCATACTCATTATGGTT+TGG | - | chr1.3:16619103-16619122 | MS.gene62984:intron | 35.0% | |
| TAAAATTGGGTCCCATATGT+CGG | + | chr1.3:16619806-16619825 | None:intergenic | 35.0% | |
| TCAAGAAAAGGAAATTGGTG+GGG | - | chr1.3:16618915-16618934 | MS.gene62984:intron | 35.0% | |
| TCTTAGTAGTTCATGTCCTT+CGG | + | chr1.3:16618750-16618769 | None:intergenic | 35.0% | |
| TCTTCGAAATTTGAAGGTCT+AGG | + | chr1.3:16618125-16618144 | None:intergenic | 35.0% | |
| TGAATGTTGTGGTTGACAAT+AGG | - | chr1.3:16621402-16621421 | MS.gene62984:CDS | 35.0% | |
| TGATTAAAAGCTTAGCACCA+CGG | + | chr1.3:16617755-16617774 | None:intergenic | 35.0% | |
| TGGTTCTTCAGTGTATCATT+TGG | - | chr1.3:16617700-16617719 | MS.gene62984:intron | 35.0% | |
| TGGTTGAAATTTGATCCTCT+AGG | + | chr1.3:16618005-16618024 | None:intergenic | 35.0% | |
| TGTGACCAAACCAAAATTCT+TGG | - | chr1.3:16620939-16620958 | MS.gene62984:CDS | 35.0% | |
| TTAGTAGTAGAGGAGAATTC+CGG | + | chr1.3:16618224-16618243 | None:intergenic | 35.0% | |
| TTTAACAACGGAGATGTAGT+GGG | + | chr1.3:16618604-16618623 | None:intergenic | 35.0% | |
| TTTATACCGGAACATTGATC+CGG | + | chr1.3:16617399-16617418 | None:intergenic | 35.0% | |
| ! | AAGAGGACTTCAAGTTCAAT+GGG | - | chr1.3:16618938-16618957 | MS.gene62984:intron | 35.0% |
| ! | ACCAAGACATTCCAATTTTG+GGG | - | chr1.3:16618055-16618074 | MS.gene62984:intron | 35.0% |
| ! | ATTCCCATAACCAAAGTGTT+AGG | + | chr1.3:16617624-16617643 | None:intergenic | 35.0% |
| ! | CAACCAAGACATTCCAATTT+TGG | - | chr1.3:16618053-16618072 | MS.gene62984:intron | 35.0% |
| ! | CTATGTTTAGCTTAGGTAAG+TGG | - | chr1.3:16619454-16619473 | MS.gene62984:intron | 35.0% |
| ! | GATTATTGGTTGAGATGAAG+TGG | + | chr1.3:16617461-16617480 | None:intergenic | 35.0% |
| ! | TGAGAAAAGTATGGATTTGG+GGG | - | chr1.3:16619670-16619689 | MS.gene62984:intron | 35.0% |
| ! | TTGAATTTGAGAGTATGGGT+AGG | - | chr1.3:16619639-16619658 | MS.gene62984:intron | 35.0% |
| !! | AACATCACCAAGATAATGGA+TGG | + | chr1.3:16619719-16619738 | None:intergenic | 35.0% |
| !! | CAAGTCTCATTGGTCTTATT+TGG | - | chr1.3:16619157-16619176 | MS.gene62984:intron | 35.0% |
| !! | CGTTTCCTTTAAGGTTGATT+CGG | - | chr1.3:16617806-16617825 | MS.gene62984:intron | 35.0% |
| !! | TAGCTTAATGGTTCAAGTTG+TGG | - | chr1.3:16617680-16617699 | MS.gene62984:intron | 35.0% |
| !! | TCCTAGATTTGGGTTTTATC+CGG | - | chr1.3:16618160-16618179 | MS.gene62984:intron | 35.0% |
| !! | TGGTGCTAAGCTTTTAATCA+TGG | - | chr1.3:16617755-16617774 | MS.gene62984:intron | 35.0% |
| !!! | CTTTTTCTTTTTGAGTACCG+TGG | - | chr1.3:16617735-16617754 | MS.gene62984:intron | 35.0% |
| !!! | TTGTTGGTTTTCTTACATGC+AGG | - | chr1.3:16619361-16619380 | MS.gene62984:intron | 35.0% |
| AAAATTGGGTCCCATATGTC+GGG | + | chr1.3:16619805-16619824 | None:intergenic | 40.0% | |
| AAAGACACACATAGTGACAC+AGG | + | chr1.3:16619988-16620007 | None:intergenic | 40.0% | |
| AAATTCGGAACAGTCAGAAG+AGG | - | chr1.3:16618394-16618413 | MS.gene62984:CDS | 40.0% | |
| AACAATAGCTACATGCAGGA+GGG | + | chr1.3:16620618-16620637 | None:intergenic | 40.0% | |
| AACCCAAGATCATTGCATGT+GGG | - | chr1.3:16620501-16620520 | MS.gene62984:CDS | 40.0% | |
| AACTGTGCCTAATTCGTATC+CGG | - | chr1.3:16618190-16618209 | MS.gene62984:intron | 40.0% | |
| AAGACACACATAGTGACACA+GGG | + | chr1.3:16619987-16620006 | None:intergenic | 40.0% | |
| AATCAAGGCTCTTGATCCAT+TGG | - | chr1.3:16618700-16618719 | MS.gene62984:intron | 40.0% | |
| AATTCGGAACAGTCAGAAGA+GGG | - | chr1.3:16618395-16618414 | MS.gene62984:CDS | 40.0% | |
| ACAAATGGAACAATCCCTTG+TGG | + | chr1.3:16621436-16621455 | None:intergenic | 40.0% | |
| ACCTTCTTCTTCAGACACAA+TGG | - | chr1.3:16619835-16619854 | MS.gene62984:CDS | 40.0% | |
| ATACCTACCTAAAGGCAACA+AGG | + | chr1.3:16619185-16619204 | None:intergenic | 40.0% | |
| ATTCCCACATGCAATGATCT+TGG | + | chr1.3:16620507-16620526 | None:intergenic | 40.0% | |
| ATTGCAGACAAAAGGTTCTC+AGG | - | chr1.3:16618295-16618314 | MS.gene62984:intron | 40.0% | |
| ATTGGTTGAGATGAAGTGGA+AGG | + | chr1.3:16617457-16617476 | None:intergenic | 40.0% | |
| ATTTCCATACTGTCTGATGC+TGG | - | chr1.3:16619420-16619439 | MS.gene62984:intron | 40.0% | |
| CAGGTTCAATTGCAGACAAA+AGG | - | chr1.3:16618287-16618306 | MS.gene62984:intron | 40.0% | |
| CATGTCCTTCGGAATATACT+AGG | + | chr1.3:16618739-16618758 | None:intergenic | 40.0% | |
| CGGAGAGATATAGTACTCAT+AGG | - | chr1.3:16618636-16618655 | MS.gene62984:intron | 40.0% | |
| CTACTCTACTACATTCTCCT+TGG | - | chr1.3:16621654-16621673 | MS.gene62984:CDS | 40.0% | |
| CTCATAGCCATCCATTATCT+TGG | - | chr1.3:16619709-16619728 | MS.gene62984:intron | 40.0% | |
| CTTCACAGGTTTAGTAGTAG+AGG | + | chr1.3:16618234-16618253 | None:intergenic | 40.0% | |
| CTTCTGACTGTTCCGAATTT+CGG | + | chr1.3:16618394-16618413 | None:intergenic | 40.0% | |
| CTTGAAACTGATGCATCAGT+TGG | - | chr1.3:16617858-16617877 | MS.gene62984:intron | 40.0% | |
| GAAATTTGATCCTCTAGGTG+TGG | + | chr1.3:16618000-16618019 | None:intergenic | 40.0% | |
| GACACGTCTCATACTCATTA+TGG | - | chr1.3:16619098-16619117 | MS.gene62984:intron | 40.0% | |
| GCTACCCTAATTAACCATAG+TGG | - | chr1.3:16619876-16619895 | MS.gene62984:CDS | 40.0% | |
| GGTCAAGAAAAGGAAATTGG+TGG | - | chr1.3:16618913-16618932 | MS.gene62984:intron | 40.0% | |
| GGTGGTCAAGAAAAGGAAAT+TGG | - | chr1.3:16618910-16618929 | MS.gene62984:intron | 40.0% | |
| GTGAGAAAATCTTCCACCAA+CGG | + | chr1.3:16617377-16617396 | None:intergenic | 40.0% | |
| GTGCAAGTTCTCCTAGATTT+GGG | - | chr1.3:16618150-16618169 | MS.gene62984:intron | 40.0% | |
| GTTGCTATGATCTTAGCCTA+CGG | - | chr1.3:16617345-16617364 | MS.gene62984:intron | 40.0% | |
| TACCTACCTAAAGGCAACAA+GGG | + | chr1.3:16619184-16619203 | None:intergenic | 40.0% | |
| TAGTAGTAGAGGAGAATTCC+GGG | + | chr1.3:16618223-16618242 | None:intergenic | 40.0% | |
| TATGATCTTAGCCTACGGTT+CGG | - | chr1.3:16617350-16617369 | MS.gene62984:intron | 40.0% | |
| TCAGCTCCAGTCAAATTTGA+CGG | + | chr1.3:16617960-16617979 | None:intergenic | 40.0% | |
| TCATGGAGTAAAACTCCTGA+TGG | + | chr1.3:16618025-16618044 | None:intergenic | 40.0% | |
| TCCATTGTGTCTGAAGAAGA+AGG | + | chr1.3:16619839-16619858 | None:intergenic | 40.0% | |
| TCGGATGTTATGTCGTTAGA+TGG | - | chr1.3:16617825-16617844 | MS.gene62984:intron | 40.0% | |
| TCTTCAGACACAATGGACAA+GGG | - | chr1.3:16619842-16619861 | MS.gene62984:CDS | 40.0% | |
| TGCTAGTAGCACTTTCACTA+TGG | - | chr1.3:16617535-16617554 | MS.gene62984:intron | 40.0% | |
| TGCTTACGCTGTACTAAGAA+TGG | + | chr1.3:16621488-16621507 | None:intergenic | 40.0% | |
| TTACACTGTCTTAACAGCAG+TGG | - | chr1.3:16617311-16617330 | MS.gene62984:CDS | 40.0% | |
| TTCCCACATGCAATGATCTT+GGG | + | chr1.3:16620506-16620525 | None:intergenic | 40.0% | |
| TTCTTCAGACACAATGGACA+AGG | - | chr1.3:16619841-16619860 | MS.gene62984:CDS | 40.0% | |
| TTGAGATGAAGTGGAAGGAA+AGG | + | chr1.3:16617452-16617471 | None:intergenic | 40.0% | |
| TTTGTCTGCAATTGAACCTG+CGG | + | chr1.3:16618287-16618306 | None:intergenic | 40.0% | |
| ! | AGAGGACTTCAAGTTCAATG+GGG | - | chr1.3:16618939-16618958 | MS.gene62984:intron | 40.0% |
| ! | CAGGAGTTTTACTCCATGAT+GGG | - | chr1.3:16618026-16618045 | MS.gene62984:intron | 40.0% |
| ! | GAAGAGGACTTCAAGTTCAA+TGG | - | chr1.3:16618937-16618956 | MS.gene62984:intron | 40.0% |
| ! | GGAATGGCTATGTTTAGCTT+AGG | - | chr1.3:16619447-16619466 | MS.gene62984:intron | 40.0% |
| ! | TCAGGAGTTTTACTCCATGA+TGG | - | chr1.3:16618025-16618044 | MS.gene62984:intron | 40.0% |
| ! | TGGATCAGGACCAAGAATTT+TGG | + | chr1.3:16620952-16620971 | None:intergenic | 40.0% |
| ! | TGGTTTTCTTACATGCAGGT+GGG | - | chr1.3:16619365-16619384 | MS.gene62984:intron | 40.0% |
| ! | TTCTGTTGCTTCATTTGCCA+TGG | - | chr1.3:16620526-16620545 | MS.gene62984:CDS | 40.0% |
| ! | TTGGTGGAAGATTTTCTCAC+CGG | - | chr1.3:16617377-16617396 | MS.gene62984:intron | 40.0% |
| !! | ATGCATCAGTTGGTGATGAT+GGG | - | chr1.3:16617868-16617887 | MS.gene62984:intron | 40.0% |
| !! | GTACGAAAAAAGAGGTACTG+CGG | - | chr1.3:16621038-16621057 | MS.gene62984:CDS | 40.0% |
| !! | TCTTGGTTGATAACCCATCA+TGG | + | chr1.3:16618042-16618061 | None:intergenic | 40.0% |
| !! | TTGGTTTTCTTACATGCAGG+TGG | - | chr1.3:16619364-16619383 | MS.gene62984:intron | 40.0% |
| !!! | CAGGACCAAGAATTTTGGTT+TGG | + | chr1.3:16620947-16620966 | None:intergenic | 40.0% |
| AAAGATCACTTGTGTGGACC+AGG | + | chr1.3:16620821-16620840 | None:intergenic | 45.0% | |
| AAAGGAAATTGGTGGGGAAG+AGG | - | chr1.3:16618921-16618940 | MS.gene62984:intron | 45.0% | |
| AAATTGGGTCCCATATGTCG+GGG | + | chr1.3:16619804-16619823 | None:intergenic | 45.0% | |
| AAGACCAGCATCAGACAGTA+TGG | + | chr1.3:16619427-16619446 | None:intergenic | 45.0% | |
| AAGGTAGGAGAACAAGGAGA+AGG | - | chr1.3:16618964-16618983 | MS.gene62984:intron | 45.0% | |
| AAGTTCAATGGGGTGAAGGT+AGG | - | chr1.3:16618949-16618968 | MS.gene62984:intron | 45.0% | |
| AATAGGCTGCACTTCCACAA+GGG | - | chr1.3:16621419-16621438 | MS.gene62984:CDS | 45.0% | |
| AATTGAACCTGCGGTTGTTG+CGG | + | chr1.3:16618278-16618297 | None:intergenic | 45.0% | |
| ACCCAATGGACCTAACAAGT+TGG | - | chr1.3:16618987-16619006 | MS.gene62984:intron | 45.0% | |
| AGCATAATGTCCCCGACATA+TGG | - | chr1.3:16619791-16619810 | MS.gene62984:CDS | 45.0% | |
| ATGAAGTGGAAGGAAAGGAG+AGG | + | chr1.3:16617447-16617466 | None:intergenic | 45.0% | |
| CAACCCAAGATCATTGCATG+TGG | - | chr1.3:16620500-16620519 | MS.gene62984:CDS | 45.0% | |
| CCCAATGGACCTAACAAGTT+GGG | - | chr1.3:16618988-16619007 | MS.gene62984:intron | 45.0% | |
| CCTCAACGTGTTCCGAAATT+CGG | - | chr1.3:16618379-16618398 | MS.gene62984:CDS | 45.0% | |
| CCTGAACAATAGCTACATGC+AGG | + | chr1.3:16620622-16620641 | None:intergenic | 45.0% | |
| CCTGCATGTAGCTATTGTTC+AGG | - | chr1.3:16620619-16620638 | MS.gene62984:CDS | 45.0% | |
| CGCGACAAAACGGTTTATAC+CGG | + | chr1.3:16617412-16617431 | None:intergenic | 45.0% | |
| CTGTACTAAGAATGGCTGGA+TGG | + | chr1.3:16621480-16621499 | None:intergenic | 45.0% | |
| GAACAATAGCTACATGCAGG+AGG | + | chr1.3:16620619-16620638 | None:intergenic | 45.0% | |
| GAGAAAATCTTGTGTGGTCC+TGG | - | chr1.3:16620800-16620819 | MS.gene62984:CDS | 45.0% | |
| GAGAAACACTTGTGTGGATC+AGG | + | chr1.3:16620966-16620985 | None:intergenic | 45.0% | |
| GCATAATGTCCCCGACATAT+GGG | - | chr1.3:16619792-16619811 | MS.gene62984:CDS | 45.0% | |
| GCCCCAAAATTGGAATGTCT+TGG | + | chr1.3:16618059-16618078 | None:intergenic | 45.0% | |
| GCCGGATAAAACCCAAATCT+AGG | + | chr1.3:16618164-16618183 | None:intergenic | 45.0% | |
| GGCTTCCATCGTTTCCTTTA+AGG | - | chr1.3:16617797-16617816 | MS.gene62984:intron | 45.0% | |
| GGTGCAAGTTCTCCTAGATT+TGG | - | chr1.3:16618149-16618168 | MS.gene62984:intron | 45.0% | |
| GTGACCAAAGATCACTTGTG+TGG | + | chr1.3:16620827-16620846 | None:intergenic | 45.0% | |
| TAAGGAGATCAGAATGGTGG+TGG | - | chr1.3:16618421-16618440 | MS.gene62984:CDS | 45.0% | |
| TACGCTGTACTAAGAATGGC+TGG | + | chr1.3:16621484-16621503 | None:intergenic | 45.0% | |
| TCTGTCCAGTCTTCTTCTAG+AGG | - | chr1.3:16618092-16618111 | MS.gene62984:intron | 45.0% | |
| TGCTAAGGAGATCAGAATGG+TGG | - | chr1.3:16618418-16618437 | MS.gene62984:CDS | 45.0% | |
| TGGTCCACACAAGTGATCTT+TGG | - | chr1.3:16620820-16620839 | MS.gene62984:CDS | 45.0% | |
| TTCTCACCGGATCAATGTTC+CGG | - | chr1.3:16617390-16617409 | MS.gene62984:intron | 45.0% | |
| TTTGGTCCCTTGTTGCCTTT+AGG | - | chr1.3:16619175-16619194 | MS.gene62984:intron | 45.0% | |
| ! | ATACTGTCTGATGCTGGTCT+TGG | - | chr1.3:16619426-16619445 | MS.gene62984:intron | 45.0% |
| ! | CGGTATAAACCGTTTTGTCG+CGG | - | chr1.3:16617410-16617429 | MS.gene62984:intron | 45.0% |
| ! | CTTCAAGTTCAATGGGGTGA+AGG | - | chr1.3:16618945-16618964 | MS.gene62984:intron | 45.0% |
| ! | GAATTCGAGCCCAACTTGTT+AGG | + | chr1.3:16619000-16619019 | None:intergenic | 45.0% |
| ! | TTGGTCCTCTAGAAGAAGAC+TGG | + | chr1.3:16618100-16618119 | None:intergenic | 45.0% |
| ! | TTTGGCACCGGATACGAATT+AGG | + | chr1.3:16618200-16618219 | None:intergenic | 45.0% |
| !! | CCCAACTTGTTAGGTCCATT+GGG | + | chr1.3:16618991-16619010 | None:intergenic | 45.0% |
| !! | GATGCATCAGTTGGTGATGA+TGG | - | chr1.3:16617867-16617886 | MS.gene62984:intron | 45.0% |
| !! | ATATTAATAATGATTATTTA+AGG | - | chr1.3:16618825-16618844 | MS.gene62984:intron | 5.0% |
| !!! | ATGTTTTTTTTTTTAAATAT+CGG | - | chr1.3:16620044-16620063 | MS.gene62984:CDS | 5.0% |
| !!! | TTATTTATATTGATTTAAAT+AGG | - | chr1.3:16620205-16620224 | MS.gene62984:intron | 5.0% |
| AAAGGAAACGATGGAAGCCG+CGG | + | chr1.3:16617796-16617815 | None:intergenic | 50.0% | |
| CAATAGGCTGCACTTCCACA+AGG | - | chr1.3:16621418-16621437 | MS.gene62984:CDS | 50.0% | |
| CCAGTCAAATTTGACGGTCG+CGG | + | chr1.3:16617954-16617973 | None:intergenic | 50.0% | |
| CCATAACTGCTGGACCAGTA+AGG | + | chr1.3:16620562-16620581 | None:intergenic | 50.0% | |
| CCGAATTTCGGAACACGTTG+AGG | + | chr1.3:16618382-16618401 | None:intergenic | 50.0% | |
| CCTTACTGGTCCAGCAGTTA+TGG | - | chr1.3:16620559-16620578 | MS.gene62984:CDS | 50.0% | |
| GAACAAGGAGAAGGACCCAA+TGG | - | chr1.3:16618973-16618992 | MS.gene62984:intron | 50.0% | |
| GGGTGCTAAGGAGATCAGAA+TGG | - | chr1.3:16618415-16618434 | MS.gene62984:CDS | 50.0% | |
| GTAGAGGAGAATTCCGGGTT+TGG | + | chr1.3:16618218-16618237 | None:intergenic | 50.0% | |
| GTCCCTTGTTGCCTTTAGGT+AGG | - | chr1.3:16619179-16619198 | MS.gene62984:intron | 50.0% | |
| GTGGAAGGAAAGGAGAGGTA+CGG | + | chr1.3:16617442-16617461 | None:intergenic | 50.0% | |
| TCAGACACAATGGACAAGGG+TGG | - | chr1.3:16619845-16619864 | MS.gene62984:CDS | 50.0% | |
| TGTCGGAAAACTCATGCCTC+CGG | - | chr1.3:16619065-16619084 | MS.gene62984:intron | 50.0% | |
| TTAGGAAGTCTAACGCGTCG+CGG | - | chr1.3:16617907-16617926 | MS.gene62984:intron | 50.0% | |
| !! | ACAGTCAGAAGAGGGTGCTA+AGG | - | chr1.3:16618403-16618422 | MS.gene62984:CDS | 50.0% |
| !! | GCCCAACTTGTTAGGTCCAT+TGG | + | chr1.3:16618992-16619011 | None:intergenic | 50.0% |
| !! | GTCTGATGCTGGTCTTGGAA+TGG | - | chr1.3:16619431-16619450 | MS.gene62984:intron | 50.0% |
| AGGCCAGCACTTTCCGAAAC+CGG | + | chr1.3:16618362-16618381 | None:intergenic | 55.0% | |
| AGTCTCAGCTCCACACCTAG+AGG | - | chr1.3:16617987-16618006 | MS.gene62984:intron | 55.0% | |
| CCGCGACCGTCAAATTTGAC+TGG | - | chr1.3:16617951-16617970 | MS.gene62984:intron | 55.0% | |
| CGGCGAAAACCGCGACAAAA+CGG | + | chr1.3:16617422-16617441 | None:intergenic | 55.0% | |
| GAAGCTGCTGCCATAACTGC+TGG | + | chr1.3:16620572-16620591 | None:intergenic | 55.0% | |
| GACACAATGGACAAGGGTGG+TGG | - | chr1.3:16619848-16619867 | MS.gene62984:CDS | 55.0% | |
| GACACTTGAATCCGCGACTC+CGG | + | chr1.3:16619049-16619068 | None:intergenic | 55.0% | |
| GAGAATTCCGGGTTTGGCAC+CGG | + | chr1.3:16618212-16618231 | None:intergenic | 55.0% | |
| GGAGTCGCGGATTCAAGTGT+CGG | - | chr1.3:16619048-16619067 | MS.gene62984:intron | 55.0% | |
| GGGGTGAAGGTAGGAGAACA+AGG | - | chr1.3:16618958-16618977 | MS.gene62984:intron | 55.0% | |
| GTTGGGCTCGAATTCAACGC+CGG | - | chr1.3:16619005-16619024 | MS.gene62984:intron | 55.0% | |
| TTAGGCACAGTTTGCGCTGC+CGG | + | chr1.3:16618182-16618201 | None:intergenic | 55.0% | |
| TTTGATGCCGCAACAACCGC+AGG | - | chr1.3:16618268-16618287 | MS.gene62984:intron | 55.0% | |
| ! | TTCGTATCCGGTGCCAAACC+CGG | - | chr1.3:16618202-16618221 | MS.gene62984:intron | 55.0% |
| !! | CTCAAGTGCTTCGCCGGTTT+CGG | - | chr1.3:16618346-16618365 | MS.gene62984:CDS | 55.0% |
| ACTTGAATCCGCGACTCCGG+TGG | + | chr1.3:16619046-16619065 | None:intergenic | 60.0% | |
| AGACGTGTCATGACGCTCGC+CGG | + | chr1.3:16619087-16619106 | None:intergenic | 60.0% | |
| CTACATGCAGGAGGGTCCCA+CGG | + | chr1.3:16620610-16620629 | None:intergenic | 60.0% | |
| GAGCTCCACCCTAAAGCCAC+CGG | - | chr1.3:16619027-16619046 | MS.gene62984:intron | 60.0% | |
| GCAGCAGCTTCTATCGCCGT+TGG | - | chr1.3:16620581-16620600 | MS.gene62984:CDS | 60.0% | |
| GGAGCAGTTTCCAGAGACCG+CGG | - | chr1.3:16617776-16617795 | MS.gene62984:intron | 60.0% | |
| GTGGAGCTCAAGTGCTTCGC+CGG | - | chr1.3:16618340-16618359 | MS.gene62984:CDS | 60.0% | |
| !! | GTGGCTTTAGGGTGGAGCTC+CGG | + | chr1.3:16619027-16619046 | None:intergenic | 60.0% |
| !! | TAGCCTACGGTTCGGTCCGT+TGG | - | chr1.3:16617358-16617377 | MS.gene62984:intron | 60.0% |
| !! | TCGCCGGTTTCGGAAAGTGC+TGG | - | chr1.3:16618356-16618375 | MS.gene62984:CDS | 60.0% |
| ACGATGGAAGCCGCGGTCTC+TGG | + | chr1.3:16617789-16617808 | None:intergenic | 65.0% | |
| CCACCAACGGACCGAACCGT+AGG | + | chr1.3:16617364-16617383 | None:intergenic | 65.0% | |
| CCCTAAAGCCACCGGAGTCG+CGG | - | chr1.3:16619035-16619054 | MS.gene62984:intron | 65.0% | |
| GGAAGTCTAACGCGTCGCGG+AGG | - | chr1.3:16617910-16617929 | MS.gene62984:intron | 65.0% | |
| TCCGCGACTCCGGTGGCTTT+AGG | + | chr1.3:16619039-16619058 | None:intergenic | 65.0% | |
| ! | CCGCGACTCCGGTGGCTTTA+GGG | + | chr1.3:16619038-16619057 | None:intergenic | 65.0% |
| ! | CTATCGCCGTTGGCCTCCGT+GGG | - | chr1.3:16620591-16620610 | MS.gene62984:CDS | 65.0% |
| ! | TCTATCGCCGTTGGCCTCCG+TGG | - | chr1.3:16620590-16620609 | MS.gene62984:CDS | 65.0% |
| !! | CCTACGGTTCGGTCCGTTGG+TGG | - | chr1.3:16617361-16617380 | MS.gene62984:intron | 65.0% |
| !! | CGACTCCGGTGGCTTTAGGG+TGG | + | chr1.3:16619035-16619054 | None:intergenic | 65.0% |
| CATGCAGGAGGGTCCCACGG+AGG | + | chr1.3:16620607-16620626 | None:intergenic | 70.0% | |
| CGTGTCATGACGCTCGCCGG+AGG | + | chr1.3:16619084-16619103 | None:intergenic | 70.0% | |
| GAGGGTCCCACGGAGGCCAA+CGG | + | chr1.3:16620600-16620619 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 16617291 | 16621683 | 16617291 | ID=MS.gene62984 |
| chr1.3 | mRNA | 16617291 | 16621683 | 16617291 | ID=MS.gene62984.t1;Parent=MS.gene62984 |
| chr1.3 | exon | 16620492 | 16621683 | 16620492 | ID=MS.gene62984.t1.exon1;Parent=MS.gene62984.t1 |
| chr1.3 | CDS | 16620492 | 16621683 | 16620492 | ID=cds.MS.gene62984.t1;Parent=MS.gene62984.t1 |
| chr1.3 | exon | 16619778 | 16620063 | 16619778 | ID=MS.gene62984.t1.exon2;Parent=MS.gene62984.t1 |
| chr1.3 | CDS | 16619778 | 16620063 | 16619778 | ID=cds.MS.gene62984.t1;Parent=MS.gene62984.t1 |
| chr1.3 | exon | 16619506 | 16619591 | 16619506 | ID=MS.gene62984.t1.exon3;Parent=MS.gene62984.t1 |
| chr1.3 | CDS | 16619506 | 16619591 | 16619506 | ID=cds.MS.gene62984.t1;Parent=MS.gene62984.t1 |
| chr1.3 | exon | 16618334 | 16618491 | 16618334 | ID=MS.gene62984.t1.exon4;Parent=MS.gene62984.t1 |
| chr1.3 | CDS | 16618334 | 16618491 | 16618334 | ID=cds.MS.gene62984.t1;Parent=MS.gene62984.t1 |
| chr1.3 | exon | 16617474 | 16617550 | 16617474 | ID=MS.gene62984.t1.exon5;Parent=MS.gene62984.t1 |
| chr1.3 | CDS | 16617474 | 16617550 | 16617474 | ID=cds.MS.gene62984.t1;Parent=MS.gene62984.t1 |
| chr1.3 | exon | 16617291 | 16617357 | 16617291 | ID=MS.gene62984.t1.exon6;Parent=MS.gene62984.t1 |
| chr1.3 | CDS | 16617291 | 16617357 | 16617291 | ID=cds.MS.gene62984.t1;Parent=MS.gene62984.t1 |
| Gene Sequence |
| Protein sequence |
