Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067006.t1 | RHN77703.1 | 94.5 | 455 | 24 | 1 | 1 | 455 | 1 | 454 | 1.20E-241 | 845.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067006.t1 | Q9M817 | 48.8 | 465 | 227 | 6 | 1 | 455 | 40 | 503 | 8.5e-119 | 428.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067006.t1 | A0A072VFR3 | 94.5 | 455 | 24 | 1 | 1 | 455 | 34 | 487 | 8.7e-242 | 845.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051744 | MS.gene067006 | 0.807326 | 5.34E-50 | -1.69E-46 |
| MS.gene05410 | MS.gene067006 | 0.809356 | 1.97E-50 | -1.69E-46 |
| MS.gene05415 | MS.gene067006 | 0.813734 | 2.20E-51 | -1.69E-46 |
| MS.gene05423 | MS.gene067006 | 0.813102 | 3.03E-51 | -1.69E-46 |
| MS.gene056174 | MS.gene067006 | 0.812043 | 5.17E-51 | -1.69E-46 |
| MS.gene060777 | MS.gene067006 | 0.809998 | 1.43E-50 | -1.69E-46 |
| MS.gene061100 | MS.gene067006 | 0.800199 | 1.61E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067006.t1 | MTR_1g026770 | 94.505 | 455 | 24 | 1 | 1 | 455 | 34 | 487 | 0.0 | 855 |
| MS.gene067006.t1 | MTR_1g026740 | 87.033 | 455 | 59 | 0 | 1 | 455 | 36 | 490 | 0.0 | 825 |
| MS.gene067006.t1 | MTR_1g026750 | 87.692 | 455 | 56 | 0 | 1 | 455 | 37 | 491 | 0.0 | 798 |
| MS.gene067006.t1 | MTR_2g101640 | 47.174 | 460 | 236 | 4 | 1 | 455 | 42 | 499 | 1.18e-151 | 446 |
| MS.gene067006.t1 | MTR_4g011280 | 48.478 | 460 | 228 | 5 | 1 | 455 | 51 | 506 | 1.96e-151 | 444 |
| MS.gene067006.t1 | MTR_2g101590 | 49.134 | 462 | 224 | 6 | 1 | 455 | 45 | 502 | 5.45e-148 | 437 |
| MS.gene067006.t1 | MTR_2g101650 | 47.162 | 458 | 233 | 5 | 1 | 452 | 43 | 497 | 1.22e-147 | 434 |
| MS.gene067006.t1 | MTR_2g101610 | 48.817 | 465 | 221 | 7 | 1 | 455 | 46 | 503 | 1.03e-145 | 431 |
| MS.gene067006.t1 | MTR_1g057460 | 44.858 | 457 | 230 | 6 | 2 | 455 | 64 | 501 | 3.42e-137 | 407 |
| MS.gene067006.t1 | MTR_8g103233 | 44.858 | 457 | 242 | 6 | 1 | 452 | 36 | 487 | 2.28e-135 | 402 |
| MS.gene067006.t1 | MTR_1g009200 | 45.395 | 456 | 236 | 5 | 1 | 449 | 46 | 495 | 8.27e-133 | 396 |
| MS.gene067006.t1 | MTR_1g057460 | 44.098 | 449 | 229 | 6 | 10 | 455 | 1 | 430 | 1.06e-132 | 393 |
| MS.gene067006.t1 | MTR_2g101560 | 46.237 | 465 | 233 | 7 | 1 | 455 | 46 | 503 | 4.17e-129 | 388 |
| MS.gene067006.t1 | MTR_0236s0050 | 43.430 | 449 | 232 | 6 | 10 | 455 | 1 | 430 | 5.78e-127 | 379 |
| MS.gene067006.t1 | MTR_5g038060 | 36.559 | 465 | 276 | 8 | 1 | 452 | 50 | 508 | 1.23e-106 | 330 |
| MS.gene067006.t1 | MTR_4g107510 | 36.559 | 465 | 278 | 8 | 1 | 452 | 55 | 515 | 9.21e-102 | 317 |
| MS.gene067006.t1 | MTR_4g107530 | 36.344 | 465 | 279 | 11 | 1 | 452 | 52 | 512 | 6.32e-97 | 304 |
| MS.gene067006.t1 | MTR_8g469480 | 35.560 | 464 | 282 | 7 | 1 | 452 | 57 | 515 | 2.79e-95 | 300 |
| MS.gene067006.t1 | MTR_4g107580 | 34.038 | 473 | 280 | 8 | 1 | 452 | 43 | 504 | 3.75e-94 | 297 |
| MS.gene067006.t1 | MTR_5g055000 | 34.354 | 457 | 286 | 8 | 1 | 449 | 37 | 487 | 7.60e-91 | 288 |
| MS.gene067006.t1 | MTR_7g088825 | 34.125 | 463 | 286 | 9 | 2 | 452 | 42 | 497 | 4.10e-90 | 286 |
| MS.gene067006.t1 | MTR_4g107610 | 32.972 | 461 | 292 | 8 | 1 | 452 | 50 | 502 | 5.27e-87 | 278 |
| MS.gene067006.t1 | MTR_7g088790 | 35.065 | 462 | 283 | 8 | 2 | 452 | 49 | 504 | 1.11e-86 | 278 |
| MS.gene067006.t1 | MTR_8g469470 | 34.690 | 467 | 285 | 8 | 1 | 452 | 51 | 512 | 1.22e-86 | 277 |
| MS.gene067006.t1 | MTR_5g038190 | 33.333 | 474 | 283 | 10 | 1 | 455 | 43 | 502 | 1.38e-84 | 271 |
| MS.gene067006.t1 | MTR_7g067010 | 33.913 | 460 | 288 | 8 | 1 | 453 | 43 | 493 | 9.83e-82 | 264 |
| MS.gene067006.t1 | MTR_4g015080 | 33.333 | 459 | 292 | 9 | 1 | 453 | 53 | 503 | 5.30e-80 | 259 |
| MS.gene067006.t1 | MTR_7g064800 | 30.040 | 506 | 302 | 11 | 1 | 471 | 45 | 533 | 1.28e-79 | 259 |
| MS.gene067006.t1 | MTR_3g462710 | 33.118 | 465 | 287 | 10 | 1 | 453 | 43 | 495 | 1.73e-78 | 255 |
| MS.gene067006.t1 | MTR_7g088820 | 31.579 | 456 | 293 | 7 | 9 | 452 | 52 | 500 | 6.25e-78 | 254 |
| MS.gene067006.t1 | MTR_7g064780 | 30.655 | 473 | 304 | 8 | 1 | 461 | 45 | 505 | 1.99e-76 | 250 |
| MS.gene067006.t1 | MTR_3g069500 | 31.126 | 453 | 291 | 6 | 4 | 452 | 57 | 492 | 2.64e-76 | 250 |
| MS.gene067006.t1 | MTR_1g009170 | 38.395 | 349 | 164 | 7 | 107 | 449 | 9 | 312 | 3.55e-76 | 244 |
| MS.gene067006.t1 | MTR_7g088820 | 31.236 | 445 | 287 | 7 | 20 | 452 | 1 | 438 | 5.99e-75 | 245 |
| MS.gene067006.t1 | MTR_3g112460 | 32.680 | 459 | 286 | 7 | 1 | 452 | 42 | 484 | 8.08e-75 | 246 |
| MS.gene067006.t1 | MTR_4g033375 | 32.174 | 460 | 278 | 9 | 1 | 452 | 51 | 484 | 1.85e-72 | 238 |
| MS.gene067006.t1 | MTR_3g112470 | 31.938 | 454 | 286 | 7 | 6 | 452 | 47 | 484 | 1.43e-71 | 237 |
| MS.gene067006.t1 | MTR_4g033325 | 32.308 | 455 | 275 | 7 | 4 | 452 | 53 | 480 | 1.02e-70 | 234 |
| MS.gene067006.t1 | MTR_3g069440 | 31.729 | 457 | 293 | 6 | 4 | 452 | 55 | 500 | 1.46e-70 | 235 |
| MS.gene067006.t1 | MTR_4g033395 | 31.429 | 455 | 282 | 7 | 4 | 452 | 54 | 484 | 2.23e-70 | 232 |
| MS.gene067006.t1 | MTR_2g093160 | 32.543 | 464 | 282 | 11 | 1 | 452 | 40 | 484 | 4.62e-70 | 233 |
| MS.gene067006.t1 | MTR_3g072300 | 30.719 | 459 | 302 | 9 | 1 | 452 | 43 | 492 | 7.19e-70 | 233 |
| MS.gene067006.t1 | MTR_3g005010 | 31.020 | 461 | 274 | 6 | 1 | 452 | 49 | 474 | 8.74e-69 | 229 |
| MS.gene067006.t1 | MTR_4g033315 | 32.826 | 460 | 274 | 10 | 1 | 452 | 50 | 482 | 1.45e-68 | 229 |
| MS.gene067006.t1 | MTR_4g033310 | 32.826 | 460 | 274 | 10 | 1 | 452 | 50 | 482 | 1.45e-68 | 229 |
| MS.gene067006.t1 | MTR_5g012270 | 30.108 | 465 | 305 | 9 | 1 | 452 | 48 | 505 | 1.82e-68 | 229 |
| MS.gene067006.t1 | MTR_7g065080 | 28.698 | 453 | 304 | 7 | 1 | 449 | 50 | 487 | 1.94e-68 | 229 |
| MS.gene067006.t1 | MTR_4g101380 | 31.183 | 465 | 303 | 8 | 1 | 452 | 46 | 506 | 4.12e-68 | 228 |
| MS.gene067006.t1 | MTR_0294s0020 | 33.260 | 454 | 270 | 9 | 5 | 452 | 54 | 480 | 9.06e-68 | 227 |
| MS.gene067006.t1 | MTR_1g075440 | 31.983 | 469 | 286 | 11 | 1 | 453 | 47 | 498 | 1.87e-67 | 227 |
| MS.gene067006.t1 | MTR_4g019580 | 29.825 | 456 | 301 | 8 | 1 | 449 | 55 | 498 | 3.73e-67 | 226 |
| MS.gene067006.t1 | MTR_4g033330 | 32.314 | 458 | 279 | 8 | 1 | 452 | 50 | 482 | 9.77e-67 | 223 |
| MS.gene067006.t1 | MTR_1g041835 | 31.466 | 464 | 294 | 10 | 1 | 453 | 46 | 496 | 3.46e-66 | 223 |
| MS.gene067006.t1 | MTR_1g041885 | 29.590 | 463 | 298 | 11 | 1 | 453 | 1 | 445 | 5.30e-66 | 221 |
| MS.gene067006.t1 | MTR_3g069420 | 30.702 | 456 | 305 | 5 | 1 | 452 | 53 | 501 | 9.14e-66 | 222 |
| MS.gene067006.t1 | MTR_2g093640 | 33.475 | 469 | 267 | 15 | 1 | 450 | 40 | 482 | 2.04e-65 | 220 |
| MS.gene067006.t1 | MTR_1g042310 | 30.303 | 462 | 303 | 9 | 1 | 453 | 1 | 452 | 2.32e-65 | 220 |
| MS.gene067006.t1 | MTR_1g042310 | 30.303 | 462 | 303 | 9 | 1 | 453 | 8 | 459 | 2.55e-65 | 220 |
| MS.gene067006.t1 | MTR_1g042310 | 30.303 | 462 | 303 | 9 | 1 | 453 | 45 | 496 | 4.89e-65 | 220 |
| MS.gene067006.t1 | MTR_2g093180 | 32.553 | 470 | 275 | 15 | 1 | 452 | 40 | 485 | 1.25e-64 | 218 |
| MS.gene067006.t1 | MTR_5g012290 | 30.670 | 463 | 305 | 9 | 1 | 452 | 46 | 503 | 1.45e-64 | 219 |
| MS.gene067006.t1 | MTR_3g112450 | 31.304 | 460 | 290 | 9 | 2 | 452 | 43 | 485 | 2.75e-64 | 218 |
| MS.gene067006.t1 | MTR_7g088820 | 30.982 | 397 | 255 | 7 | 68 | 452 | 1 | 390 | 5.43e-64 | 215 |
| MS.gene067006.t1 | MTR_5g014150 | 28.726 | 463 | 313 | 8 | 1 | 452 | 63 | 519 | 3.97e-63 | 216 |
| MS.gene067006.t1 | MTR_1g041875 | 29.221 | 462 | 301 | 10 | 1 | 453 | 48 | 492 | 8.59e-63 | 214 |
| MS.gene067006.t1 | MTR_4g098800 | 29.677 | 465 | 301 | 10 | 1 | 452 | 55 | 506 | 1.90e-62 | 213 |
| MS.gene067006.t1 | MTR_4g098800 | 29.677 | 465 | 301 | 10 | 1 | 452 | 120 | 571 | 6.44e-62 | 213 |
| MS.gene067006.t1 | MTR_7g005930 | 30.065 | 459 | 302 | 7 | 1 | 452 | 54 | 500 | 6.62e-62 | 212 |
| MS.gene067006.t1 | MTR_7g065080 | 28.744 | 414 | 276 | 7 | 40 | 449 | 2 | 400 | 9.94e-62 | 209 |
| MS.gene067006.t1 | MTR_1g041815 | 30.819 | 464 | 297 | 10 | 1 | 453 | 46 | 496 | 1.05e-61 | 211 |
| MS.gene067006.t1 | MTR_3g462710 | 32.161 | 398 | 246 | 10 | 68 | 453 | 1 | 386 | 9.84e-61 | 206 |
| MS.gene067006.t1 | MTR_7g098230 | 28.294 | 463 | 307 | 10 | 1 | 451 | 45 | 494 | 1.15e-59 | 206 |
| MS.gene067006.t1 | MTR_7g098180 | 28.480 | 467 | 306 | 11 | 1 | 453 | 50 | 502 | 1.97e-59 | 206 |
| MS.gene067006.t1 | MTR_7g098200 | 27.332 | 461 | 314 | 8 | 1 | 451 | 48 | 497 | 2.78e-59 | 205 |
| MS.gene067006.t1 | MTR_8g087810 | 30.687 | 466 | 304 | 9 | 1 | 450 | 40 | 502 | 3.28e-59 | 204 |
| MS.gene067006.t1 | MTR_3g014790 | 29.498 | 478 | 271 | 12 | 2 | 450 | 37 | 477 | 5.44e-59 | 203 |
| MS.gene067006.t1 | MTR_7g010820 | 29.221 | 462 | 312 | 9 | 1 | 452 | 45 | 501 | 5.69e-59 | 204 |
| MS.gene067006.t1 | MTR_8g087780 | 29.185 | 466 | 310 | 9 | 1 | 450 | 40 | 501 | 6.04e-59 | 204 |
| MS.gene067006.t1 | MTR_7g098220 | 29.462 | 465 | 303 | 10 | 1 | 453 | 5 | 456 | 6.75e-59 | 203 |
| MS.gene067006.t1 | MTR_7g098220 | 29.462 | 465 | 303 | 10 | 1 | 453 | 49 | 500 | 1.07e-58 | 203 |
| MS.gene067006.t1 | MTR_4g033325 | 31.378 | 392 | 236 | 7 | 67 | 452 | 18 | 382 | 1.26e-58 | 200 |
| MS.gene067006.t1 | MTR_7g098200 | 27.527 | 465 | 298 | 10 | 1 | 451 | 48 | 487 | 1.79e-58 | 203 |
| MS.gene067006.t1 | MTR_7g006540 | 30.213 | 470 | 306 | 8 | 1 | 455 | 82 | 544 | 1.30e-57 | 201 |
| MS.gene067006.t1 | MTR_4g033325 | 31.332 | 383 | 230 | 7 | 76 | 452 | 1 | 356 | 1.79e-57 | 196 |
| MS.gene067006.t1 | MTR_7g098040 | 28.633 | 461 | 306 | 10 | 1 | 450 | 53 | 501 | 2.90e-57 | 200 |
| MS.gene067006.t1 | MTR_7g098160 | 27.332 | 461 | 314 | 9 | 1 | 451 | 52 | 501 | 4.45e-56 | 196 |
| MS.gene067006.t1 | MTR_2g017750 | 27.932 | 469 | 314 | 11 | 1 | 450 | 53 | 516 | 6.58e-56 | 196 |
| MS.gene067006.t1 | MTR_7g013270 | 29.718 | 461 | 303 | 7 | 1 | 452 | 109 | 557 | 3.26e-55 | 195 |
| MS.gene067006.t1 | MTR_5g085850 | 29.978 | 457 | 293 | 9 | 5 | 452 | 53 | 491 | 9.65e-55 | 192 |
| MS.gene067006.t1 | MTR_4g033385 | 30.612 | 392 | 242 | 7 | 67 | 452 | 16 | 383 | 1.32e-54 | 189 |
| MS.gene067006.t1 | MTR_2g005130 | 28.000 | 450 | 300 | 7 | 1 | 447 | 59 | 487 | 1.65e-54 | 192 |
| MS.gene067006.t1 | MTR_1g116930 | 28.043 | 460 | 310 | 9 | 1 | 452 | 42 | 488 | 4.89e-54 | 191 |
| MS.gene067006.t1 | MTR_7g098090 | 27.409 | 467 | 311 | 10 | 1 | 451 | 52 | 506 | 1.30e-53 | 190 |
| MS.gene067006.t1 | MTR_3g100980 | 27.948 | 458 | 303 | 11 | 9 | 453 | 43 | 486 | 4.26e-53 | 188 |
| MS.gene067006.t1 | MTR_7g098150 | 28.571 | 406 | 268 | 9 | 1 | 395 | 52 | 446 | 4.62e-52 | 183 |
| MS.gene067006.t1 | MTR_4g114340 | 30.786 | 458 | 301 | 10 | 1 | 452 | 43 | 490 | 2.34e-51 | 183 |
| MS.gene067006.t1 | MTR_8g038880 | 28.785 | 469 | 280 | 12 | 5 | 450 | 43 | 480 | 6.27e-50 | 179 |
| MS.gene067006.t1 | MTR_1g085090 | 27.312 | 465 | 306 | 13 | 1 | 455 | 35 | 477 | 9.31e-50 | 179 |
| MS.gene067006.t1 | MTR_3g100980 | 26.749 | 486 | 301 | 13 | 9 | 453 | 43 | 514 | 7.72e-48 | 174 |
| MS.gene067006.t1 | MTR_4g107670 | 27.074 | 458 | 315 | 9 | 9 | 453 | 51 | 502 | 2.01e-46 | 170 |
| MS.gene067006.t1 | MTR_7g111260 | 27.682 | 466 | 303 | 14 | 1 | 455 | 35 | 477 | 6.83e-46 | 168 |
| MS.gene067006.t1 | MTR_5g038380 | 27.623 | 467 | 300 | 8 | 9 | 453 | 55 | 505 | 7.93e-46 | 168 |
| MS.gene067006.t1 | MTR_8g469310 | 26.124 | 467 | 306 | 9 | 9 | 453 | 53 | 502 | 1.56e-45 | 167 |
| MS.gene067006.t1 | MTR_7g098200 | 25.888 | 394 | 271 | 8 | 68 | 451 | 1 | 383 | 4.56e-43 | 159 |
| MS.gene067006.t1 | MTR_6g008690 | 28.178 | 472 | 281 | 12 | 5 | 452 | 30 | 467 | 1.28e-42 | 159 |
| MS.gene067006.t1 | MTR_7g052600 | 26.562 | 448 | 285 | 10 | 10 | 453 | 53 | 460 | 4.70e-40 | 151 |
| MS.gene067006.t1 | MTR_7g051830 | 27.232 | 448 | 282 | 11 | 10 | 453 | 53 | 460 | 5.74e-40 | 151 |
| MS.gene067006.t1 | MTR_7g051880 | 26.292 | 445 | 290 | 9 | 10 | 453 | 53 | 460 | 1.48e-39 | 150 |
| MS.gene067006.t1 | MTR_4g123537 | 27.711 | 415 | 267 | 13 | 41 | 445 | 100 | 491 | 1.30e-37 | 145 |
| MS.gene067006.t1 | MTR_7g098210 | 26.840 | 462 | 237 | 17 | 1 | 451 | 1 | 372 | 5.09e-34 | 133 |
| MS.gene067006.t1 | MTR_4g024930 | 25.690 | 471 | 294 | 17 | 1 | 453 | 55 | 487 | 4.13e-29 | 120 |
| MS.gene067006.t1 | MTR_4g033310 | 31.048 | 248 | 151 | 6 | 208 | 452 | 188 | 418 | 6.23e-29 | 119 |
| MS.gene067006.t1 | MTR_4g033310 | 35.333 | 150 | 86 | 2 | 4 | 151 | 53 | 193 | 8.96e-17 | 83.2 |
| MS.gene067006.t1 | MTR_8g091265 | 37.762 | 143 | 75 | 7 | 247 | 378 | 3 | 142 | 1.82e-17 | 79.3 |
| MS.gene067006.t1 | MTR_3g065350 | 27.879 | 165 | 110 | 4 | 289 | 452 | 1 | 157 | 4.21e-11 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067006.t1 | AT1G52190 | 48.817 | 465 | 227 | 6 | 1 | 455 | 40 | 503 | 1.61e-152 | 447 |
| MS.gene067006.t1 | AT3G16180 | 47.300 | 463 | 235 | 5 | 1 | 455 | 42 | 503 | 3.15e-148 | 436 |
| MS.gene067006.t1 | AT1G69870 | 37.100 | 469 | 271 | 10 | 1 | 455 | 70 | 528 | 3.82e-101 | 316 |
| MS.gene067006.t1 | AT1G27080 | 34.698 | 464 | 274 | 11 | 1 | 452 | 33 | 479 | 5.65e-92 | 291 |
| MS.gene067006.t1 | AT1G27080 | 34.802 | 454 | 267 | 11 | 11 | 452 | 1 | 437 | 5.33e-90 | 284 |
| MS.gene067006.t1 | AT5G62680 | 33.983 | 462 | 287 | 9 | 5 | 452 | 66 | 523 | 2.29e-88 | 282 |
| MS.gene067006.t1 | AT1G18880 | 34.141 | 454 | 287 | 6 | 9 | 452 | 46 | 497 | 5.27e-88 | 281 |
| MS.gene067006.t1 | AT3G54140 | 34.490 | 461 | 286 | 8 | 1 | 453 | 43 | 495 | 1.23e-86 | 276 |
| MS.gene067006.t1 | AT3G54140 | 34.490 | 461 | 286 | 8 | 1 | 453 | 43 | 495 | 1.23e-86 | 276 |
| MS.gene067006.t1 | AT3G47960 | 34.565 | 460 | 285 | 9 | 5 | 452 | 84 | 539 | 3.11e-85 | 275 |
| MS.gene067006.t1 | AT2G02040 | 35.699 | 465 | 276 | 11 | 1 | 453 | 60 | 513 | 1.51e-82 | 266 |
| MS.gene067006.t1 | AT1G69860 | 35.776 | 464 | 267 | 9 | 1 | 452 | 37 | 481 | 2.16e-82 | 265 |
| MS.gene067006.t1 | AT1G68570 | 33.693 | 463 | 290 | 7 | 1 | 452 | 12 | 468 | 9.60e-82 | 264 |
| MS.gene067006.t1 | AT5G11570 | 38.293 | 457 | 209 | 11 | 1 | 455 | 32 | 417 | 1.65e-81 | 261 |
| MS.gene067006.t1 | AT1G68570 | 33.693 | 463 | 290 | 7 | 1 | 452 | 42 | 498 | 1.66e-81 | 264 |
| MS.gene067006.t1 | AT5G01180 | 33.836 | 464 | 284 | 10 | 1 | 453 | 44 | 495 | 1.76e-81 | 263 |
| MS.gene067006.t1 | AT5G01180 | 33.836 | 464 | 284 | 10 | 1 | 453 | 44 | 495 | 1.76e-81 | 263 |
| MS.gene067006.t1 | AT5G01180 | 33.836 | 464 | 284 | 10 | 1 | 453 | 44 | 495 | 1.76e-81 | 263 |
| MS.gene067006.t1 | AT1G62200 | 34.839 | 465 | 275 | 8 | 1 | 453 | 71 | 519 | 5.47e-81 | 262 |
| MS.gene067006.t1 | AT5G28470 | 32.473 | 465 | 286 | 12 | 1 | 452 | 36 | 485 | 2.98e-80 | 259 |
| MS.gene067006.t1 | AT5G28470 | 32.548 | 467 | 285 | 13 | 1 | 452 | 36 | 487 | 3.37e-80 | 259 |
| MS.gene067006.t1 | AT3G45660 | 33.478 | 460 | 286 | 9 | 1 | 456 | 40 | 483 | 1.58e-77 | 253 |
| MS.gene067006.t1 | AT3G45660 | 33.478 | 460 | 286 | 9 | 1 | 456 | 40 | 483 | 1.58e-77 | 253 |
| MS.gene067006.t1 | AT3G45660 | 33.478 | 460 | 286 | 9 | 1 | 456 | 61 | 504 | 2.78e-77 | 252 |
| MS.gene067006.t1 | AT1G62200 | 32.996 | 494 | 274 | 8 | 1 | 453 | 71 | 548 | 5.21e-76 | 250 |
| MS.gene067006.t1 | AT1G62200 | 32.996 | 494 | 274 | 8 | 1 | 453 | 85 | 562 | 5.46e-76 | 250 |
| MS.gene067006.t1 | AT3G45650 | 32.026 | 459 | 294 | 8 | 1 | 456 | 41 | 484 | 7.92e-73 | 240 |
| MS.gene067006.t1 | AT3G45720 | 31.102 | 463 | 291 | 10 | 1 | 455 | 38 | 480 | 5.42e-72 | 238 |
| MS.gene067006.t1 | AT2G40460 | 32.684 | 462 | 283 | 9 | 1 | 452 | 43 | 486 | 1.67e-71 | 237 |
| MS.gene067006.t1 | AT2G02020 | 31.567 | 453 | 268 | 5 | 1 | 450 | 61 | 474 | 9.13e-71 | 234 |
| MS.gene067006.t1 | AT3G45680 | 30.952 | 462 | 296 | 10 | 1 | 456 | 39 | 483 | 3.62e-68 | 228 |
| MS.gene067006.t1 | AT3G45710 | 31.602 | 462 | 294 | 10 | 1 | 456 | 40 | 485 | 1.84e-67 | 226 |
| MS.gene067006.t1 | AT3G45650 | 30.309 | 485 | 294 | 9 | 1 | 456 | 41 | 510 | 3.96e-67 | 226 |
| MS.gene067006.t1 | AT2G37900 | 30.549 | 455 | 293 | 9 | 1 | 449 | 57 | 494 | 4.36e-67 | 225 |
| MS.gene067006.t1 | AT1G22570 | 31.102 | 463 | 291 | 6 | 2 | 453 | 13 | 458 | 1.97e-66 | 223 |
| MS.gene067006.t1 | AT5G46050 | 28.970 | 466 | 304 | 7 | 1 | 453 | 46 | 497 | 3.07e-66 | 223 |
| MS.gene067006.t1 | AT1G22570 | 31.102 | 463 | 291 | 6 | 2 | 453 | 50 | 495 | 3.95e-66 | 223 |
| MS.gene067006.t1 | AT5G46040 | 28.788 | 462 | 310 | 6 | 1 | 453 | 46 | 497 | 1.57e-65 | 221 |
| MS.gene067006.t1 | AT3G54450 | 29.399 | 466 | 291 | 8 | 2 | 452 | 32 | 474 | 8.89e-65 | 219 |
| MS.gene067006.t1 | AT2G37900 | 31.132 | 424 | 269 | 9 | 32 | 449 | 9 | 415 | 1.11e-63 | 214 |
| MS.gene067006.t1 | AT3G45690 | 31.504 | 419 | 261 | 9 | 1 | 415 | 37 | 433 | 1.45e-63 | 214 |
| MS.gene067006.t1 | AT1G72125 | 30.044 | 456 | 291 | 9 | 2 | 449 | 49 | 484 | 2.16e-63 | 215 |
| MS.gene067006.t1 | AT3G45700 | 29.501 | 461 | 292 | 10 | 4 | 456 | 38 | 473 | 5.72e-62 | 211 |
| MS.gene067006.t1 | AT3G53960 | 28.634 | 454 | 311 | 7 | 1 | 449 | 56 | 501 | 1.85e-61 | 211 |
| MS.gene067006.t1 | AT1G72140 | 29.677 | 465 | 278 | 8 | 2 | 452 | 54 | 483 | 4.56e-61 | 209 |
| MS.gene067006.t1 | AT1G33440 | 30.501 | 459 | 296 | 10 | 1 | 453 | 57 | 498 | 6.16e-60 | 207 |
| MS.gene067006.t1 | AT1G72120 | 30.283 | 459 | 288 | 9 | 2 | 452 | 49 | 483 | 2.10e-59 | 204 |
| MS.gene067006.t1 | AT1G72130 | 30.519 | 462 | 270 | 10 | 2 | 453 | 45 | 465 | 8.32e-59 | 202 |
| MS.gene067006.t1 | AT2G02020 | 29.867 | 452 | 256 | 6 | 1 | 450 | 61 | 453 | 6.56e-58 | 200 |
| MS.gene067006.t1 | AT1G22540 | 29.978 | 457 | 291 | 8 | 2 | 452 | 50 | 483 | 2.47e-57 | 199 |
| MS.gene067006.t1 | AT1G59740 | 28.348 | 448 | 298 | 8 | 9 | 447 | 68 | 501 | 3.29e-57 | 199 |
| MS.gene067006.t1 | AT1G32450 | 28.358 | 469 | 310 | 10 | 1 | 452 | 56 | 515 | 1.26e-56 | 198 |
| MS.gene067006.t1 | AT1G22550 | 29.221 | 462 | 297 | 8 | 2 | 453 | 50 | 491 | 1.78e-56 | 197 |
| MS.gene067006.t1 | AT5G13400 | 30.867 | 473 | 299 | 12 | 1 | 455 | 83 | 545 | 2.44e-55 | 195 |
| MS.gene067006.t1 | AT1G12110 | 30.323 | 465 | 303 | 10 | 1 | 452 | 46 | 502 | 2.76e-55 | 194 |
| MS.gene067006.t1 | AT3G21670 | 29.412 | 459 | 296 | 9 | 5 | 452 | 52 | 493 | 1.01e-54 | 192 |
| MS.gene067006.t1 | AT5G19640 | 28.821 | 458 | 299 | 11 | 1 | 452 | 78 | 514 | 1.29e-53 | 190 |
| MS.gene067006.t1 | AT5G46050 | 28.822 | 399 | 257 | 7 | 68 | 453 | 1 | 385 | 2.55e-53 | 186 |
| MS.gene067006.t1 | AT2G26690 | 29.565 | 460 | 303 | 10 | 1 | 452 | 10 | 456 | 4.57e-53 | 187 |
| MS.gene067006.t1 | AT2G26690 | 29.565 | 460 | 303 | 10 | 1 | 452 | 43 | 489 | 7.13e-53 | 187 |
| MS.gene067006.t1 | AT2G26690 | 29.736 | 454 | 302 | 9 | 5 | 452 | 2 | 444 | 1.04e-52 | 186 |
| MS.gene067006.t1 | AT5G14940 | 28.632 | 468 | 288 | 10 | 5 | 452 | 30 | 471 | 9.74e-52 | 184 |
| MS.gene067006.t1 | AT4G21680 | 28.051 | 467 | 312 | 11 | 1 | 452 | 47 | 504 | 1.21e-51 | 184 |
| MS.gene067006.t1 | AT3G01350 | 29.175 | 473 | 289 | 14 | 5 | 452 | 30 | 481 | 1.67e-49 | 178 |
| MS.gene067006.t1 | AT1G27040 | 27.609 | 460 | 298 | 10 | 9 | 453 | 22 | 461 | 2.03e-49 | 177 |
| MS.gene067006.t1 | AT1G27040 | 27.609 | 460 | 298 | 10 | 9 | 453 | 54 | 493 | 3.48e-49 | 177 |
| MS.gene067006.t1 | AT1G27040 | 27.609 | 460 | 298 | 10 | 9 | 453 | 50 | 489 | 4.26e-49 | 177 |
| MS.gene067006.t1 | AT1G69850 | 27.586 | 464 | 312 | 10 | 9 | 453 | 52 | 510 | 2.28e-47 | 172 |
| MS.gene067006.t1 | AT3G25260 | 27.640 | 445 | 284 | 9 | 9 | 452 | 48 | 455 | 2.63e-42 | 157 |
| MS.gene067006.t1 | AT1G72130 | 28.496 | 379 | 227 | 10 | 85 | 453 | 3 | 347 | 1.28e-41 | 154 |
| MS.gene067006.t1 | AT1G72130 | 28.496 | 379 | 227 | 10 | 85 | 453 | 3 | 347 | 1.28e-41 | 154 |
| MS.gene067006.t1 | AT5G62730 | 25.270 | 463 | 299 | 11 | 9 | 453 | 24 | 457 | 1.53e-38 | 147 |
| MS.gene067006.t1 | AT5G62730 | 25.270 | 463 | 299 | 11 | 9 | 453 | 83 | 516 | 3.25e-38 | 147 |
| MS.gene067006.t1 | AT3G25280 | 25.169 | 445 | 295 | 8 | 9 | 452 | 48 | 455 | 3.93e-36 | 140 |
| MS.gene067006.t1 | AT2G38100 | 23.326 | 463 | 281 | 16 | 10 | 446 | 2 | 416 | 6.89e-20 | 92.8 |
| MS.gene067006.t1 | AT2G38100 | 23.026 | 456 | 291 | 14 | 10 | 446 | 24 | 438 | 9.21e-20 | 92.4 |
| MS.gene067006.t1 | AT2G38100 | 23.026 | 456 | 291 | 14 | 10 | 446 | 18 | 432 | 1.03e-19 | 92.4 |
Find 93 sgRNAs with CRISPR-Local
Find 154 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCATTCCTGTTATCCAAAT+TGG | 0.119037 | 1.3:+12727760 | None:intergenic |
| ACTAATTTCACACCAATTAT+TGG | 0.181650 | 1.3:-12729140 | MS.gene067006:CDS |
| GCATACATTCAAGAAAATTT+TGG | 0.188650 | 1.3:-12728297 | MS.gene067006:CDS |
| CCTAATTGGAATGACCATTT+TGG | 0.191021 | 1.3:-12728319 | MS.gene067006:CDS |
| AGTGTAGCATCAACACTTTC+TGG | 0.199568 | 1.3:-12727292 | MS.gene067006:CDS |
| CTGTATTTAACAAAACATTA+TGG | 0.208445 | 1.3:-12729212 | MS.gene067006:CDS |
| TCATAGAGGGCTACTTTAAT+TGG | 0.229962 | 1.3:-12728368 | MS.gene067006:CDS |
| ACAGCGGCTGCAGTCCTAAT+TGG | 0.247406 | 1.3:-12728333 | MS.gene067006:CDS |
| TGTCTTCATGTTCATATCTA+TGG | 0.260433 | 1.3:-12728247 | MS.gene067006:CDS |
| TTTGAGAAAATGGCAAGTTT+TGG | 0.270329 | 1.3:-12729254 | None:intergenic |
| GCAAGAAATGCACCAATAAT+TGG | 0.290808 | 1.3:+12729128 | None:intergenic |
| TGATCAAAATCATCCCAATT+TGG | 0.299189 | 1.3:-12727774 | MS.gene067006:CDS |
| CCAAAATGGTCATTCCAATT+AGG | 0.307226 | 1.3:+12728319 | None:intergenic |
| ATCATCCCAATTTGGATAAC+AGG | 0.307569 | 1.3:-12727766 | MS.gene067006:CDS |
| TTCTTGAATGTATGCCAAAA+TGG | 0.308116 | 1.3:+12728305 | None:intergenic |
| AGGTCAAGTGGAAGGAAATT+AGG | 0.313084 | 1.3:-12727050 | MS.gene067006:CDS |
| GCATCAACACTTTCTGGATT+AGG | 0.321032 | 1.3:-12727286 | MS.gene067006:intron |
| TGGTTCTCTTTACAGTACTA+TGG | 0.325395 | 1.3:-12727627 | MS.gene067006:CDS |
| AGAGCTTCCTCTTTAGCCTT+TGG | 0.337506 | 1.3:-12728426 | MS.gene067006:CDS |
| TGTATTTAACAAAACATTAT+GGG | 0.339474 | 1.3:-12729211 | MS.gene067006:CDS |
| CTGCCAAGGCAAATTCTTGA+TGG | 0.341231 | 1.3:-12727385 | MS.gene067006:CDS |
| CGCTACCCTACCATCGCATT+TGG | 0.343220 | 1.3:-12729089 | MS.gene067006:CDS |
| TCACTAATCACATTGCCTTT+TGG | 0.343575 | 1.3:+12728183 | None:intergenic |
| AGCTTCTTCATTCTATGTTA+AGG | 0.351587 | 1.3:-12728211 | MS.gene067006:CDS |
| AGCTTCAGTGGCAACATTCA+TGG | 0.356754 | 1.3:-12727647 | MS.gene067006:CDS |
| GTTAAATACAGAATCATGTT+TGG | 0.370654 | 1.3:+12729224 | None:intergenic |
| TTTGGTTGGATTGTTGGATT+TGG | 0.371906 | 1.3:-12728279 | MS.gene067006:CDS |
| GCTTCATTAGCAATTGTAGA+AGG | 0.376883 | 1.3:-12727487 | MS.gene067006:CDS |
| CGAAGTAATGTGGCGGTTCA+TGG | 0.385849 | 1.3:+12727687 | None:intergenic |
| TAAGGCTTATGGTCCTTGTA+AGG | 0.386085 | 1.3:-12727086 | MS.gene067006:CDS |
| ATGCCATCATTAATGACATT+TGG | 0.386226 | 1.3:+12728105 | None:intergenic |
| GGTTATGAAGTTCTTCATCT+TGG | 0.387993 | 1.3:+12727842 | None:intergenic |
| TCATTCCTGTTATCCAAATT+GGG | 0.388133 | 1.3:+12727761 | None:intergenic |
| TTTCTTGCTGATTCCTACTT+TGG | 0.405227 | 1.3:-12729113 | MS.gene067006:CDS |
| TCTCTATGCTTAATCTCCAT+TGG | 0.408644 | 1.3:-12728462 | MS.gene067006:CDS |
| TTATTCCAAGTGATAAATTC+AGG | 0.412719 | 1.3:-12728053 | MS.gene067006:intron |
| GGATCACAAGGACTAAGGTT+TGG | 0.448228 | 1.3:+12728540 | None:intergenic |
| CAATTGTGCAAAGGCTCCAT+TGG | 0.461820 | 1.3:+12727821 | None:intergenic |
| GATATGAACATGAAGACAAC+AGG | 0.477668 | 1.3:+12728252 | None:intergenic |
| GAGTTGCAGCTCATAGTGAT+AGG | 0.483801 | 1.3:+12728519 | None:intergenic |
| TGCTTAATCTCCATTGGAGC+TGG | 0.484185 | 1.3:-12728456 | MS.gene067006:CDS |
| AGTGGAAGGAAATTAGGAAT+AGG | 0.487384 | 1.3:-12727044 | MS.gene067006:CDS |
| AGAAAATTAGCAATTGATGA+AGG | 0.490657 | 1.3:-12727457 | MS.gene067006:CDS |
| CTACTAATGTGATCCTCCTC+TGG | 0.500289 | 1.3:-12729172 | MS.gene067006:CDS |
| TCACCAAATGTCATTAATGA+TGG | 0.503748 | 1.3:-12728108 | MS.gene067006:CDS |
| GTCAATGCCAAAGGCTAAAG+AGG | 0.515058 | 1.3:+12728419 | None:intergenic |
| GGTAGGGTAGCGACCAAAGT+AGG | 0.530979 | 1.3:+12729100 | None:intergenic |
| CGAAATCCCCGCAGCTTCAG+TGG | 0.532220 | 1.3:-12727659 | MS.gene067006:CDS |
| TATGTTAAGGTGGAACCAAA+AGG | 0.532360 | 1.3:-12728198 | MS.gene067006:CDS |
| TGATAGGATCACAAGGACTA+AGG | 0.535208 | 1.3:+12728535 | None:intergenic |
| GAAAATGAAGGTCAAGTGGA+AGG | 0.535212 | 1.3:-12727058 | MS.gene067006:CDS |
| AGAAGAAAATGAAGGTCAAG+TGG | 0.536273 | 1.3:-12727062 | MS.gene067006:CDS |
| ATGAAGAACTTCATAACCAA+TGG | 0.538189 | 1.3:-12727837 | MS.gene067006:CDS |
| CATTTGGTGATGGTAATTTG+AGG | 0.552102 | 1.3:+12728121 | None:intergenic |
| GCAAGCCAAATGCGATGGTA+GGG | 0.555871 | 1.3:+12729084 | None:intergenic |
| AAACCATCAAGAATTTGCCT+TGG | 0.555924 | 1.3:+12727382 | None:intergenic |
| GAAAGCTAGCTGTGATGTTG+TGG | 0.559222 | 1.3:+12728494 | None:intergenic |
| TTTAACAAAACATTATGGGA+TGG | 0.560181 | 1.3:-12729207 | MS.gene067006:CDS |
| GTTTAGTTGGTCAATGCCAA+AGG | 0.560458 | 1.3:+12728410 | None:intergenic |
| GACATGTTCACAACACCTTG+TGG | 0.562079 | 1.3:+12727421 | None:intergenic |
| AAGGCTTATGGTCCTTGTAA+GGG | 0.563025 | 1.3:-12727085 | MS.gene067006:CDS |
| AATGTTGCCACTGAAGCTGC+GGG | 0.563608 | 1.3:+12727652 | None:intergenic |
| CAGTTATGTGGCTACTGCCA+AGG | 0.564910 | 1.3:-12727399 | MS.gene067006:CDS |
| CTACTTGATCAATTGTGCAA+AGG | 0.568418 | 1.3:+12727812 | None:intergenic |
| AAAAGATGCAGGAATCATAG+AGG | 0.570243 | 1.3:-12728382 | MS.gene067006:CDS |
| TGATACCTGAATTTATCACT+TGG | 0.575875 | 1.3:+12728048 | None:intergenic |
| TCATTAATGACATTTGGTGA+TGG | 0.576041 | 1.3:+12728111 | None:intergenic |
| TCTTACACCACCAGCTCCAA+TGG | 0.583072 | 1.3:+12728446 | None:intergenic |
| TTCTTCATTCTATGTTAAGG+TGG | 0.584289 | 1.3:-12728208 | MS.gene067006:CDS |
| TTAATCTCCATTGGAGCTGG+TGG | 0.589006 | 1.3:-12728453 | MS.gene067006:CDS |
| TCTTGGTTGAGATCTTGTTG+TGG | 0.591932 | 1.3:+12727859 | None:intergenic |
| AAAGCTAGCTGTGATGTTGT+GGG | 0.592459 | 1.3:+12728495 | None:intergenic |
| GGATTATAACACAGTCATAG+AGG | 0.593902 | 1.3:+12727599 | None:intergenic |
| AGCAAGCCAAATGCGATGGT+AGG | 0.594714 | 1.3:+12729083 | None:intergenic |
| TGTAAGGGAGAAGAAAATGA+AGG | 0.596482 | 1.3:-12727070 | MS.gene067006:CDS |
| ATGTATATTAATATGAGTCA+AGG | 0.598246 | 1.3:-12727736 | MS.gene067006:CDS |
| CTCATAGTGATAGGATCACA+AGG | 0.599488 | 1.3:+12728528 | None:intergenic |
| TGGCATTGACCAACTAAACA+AGG | 0.601476 | 1.3:-12728406 | MS.gene067006:CDS |
| TAGTAGCTGCTGACCAGAGG+AGG | 0.603482 | 1.3:+12729159 | None:intergenic |
| GAATGTTGCCACTGAAGCTG+CGG | 0.610682 | 1.3:+12727651 | None:intergenic |
| TTGTGAACATGTCAGTTATG+TGG | 0.615976 | 1.3:-12727411 | MS.gene067006:CDS |
| TGCAGCCGCTGTTAAAGCAT+AGG | 0.618615 | 1.3:+12728344 | None:intergenic |
| GAGAAGCAAGCCAAATGCGA+TGG | 0.624013 | 1.3:+12729079 | None:intergenic |
| TTTCGAAGTTCGAAGTAATG+TGG | 0.624089 | 1.3:+12727677 | None:intergenic |
| TTGGACCTATGCTTTAACAG+CGG | 0.624152 | 1.3:-12728349 | MS.gene067006:CDS |
| GCTACACTAGACATAGATTG+AGG | 0.625082 | 1.3:+12727307 | None:intergenic |
| AAAGATGCAGGAATCATAGA+GGG | 0.626153 | 1.3:-12728381 | MS.gene067006:CDS |
| AATTAGTAGCTGCTGACCAG+AGG | 0.640208 | 1.3:+12729156 | None:intergenic |
| GGCTTTATAGAATTTCCACA+AGG | 0.665207 | 1.3:-12727436 | MS.gene067006:CDS |
| CGAAGTTCGAAGTAATGTGG+CGG | 0.688719 | 1.3:+12727680 | None:intergenic |
| AGTAATGTGGCGGTTCATGG+AGG | 0.708221 | 1.3:+12727690 | None:intergenic |
| TGGCATGTACTTCTGTGACA+AGG | 0.738759 | 1.3:-12728088 | MS.gene067006:CDS |
| ATGTTGCCACTGAAGCTGCG+GGG | 0.808752 | 1.3:+12727653 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTATTTATTCATTTGTTTA+TGG | - | chr1.3:12727420-12727439 | MS.gene067006:CDS | 10.0% |
| !! | AAAGAATACTAGAAAAATTA+AGG | + | chr1.3:12727399-12727418 | None:intergenic | 15.0% |
| !! | ATTAAGAGTAAAACAAAAAA+TGG | - | chr1.3:12728744-12728763 | MS.gene067006:intron | 15.0% |
| !! | TGTATTTAACAAAACATTAT+GGG | - | chr1.3:12727075-12727094 | MS.gene067006:CDS | 15.0% |
| !! | TTAAGAGTAAAACAAAAAAT+GGG | - | chr1.3:12728745-12728764 | MS.gene067006:intron | 15.0% |
| !! | TTTATGTTAAGAATTAGATA+CGG | - | chr1.3:12727250-12727269 | MS.gene067006:intron | 15.0% |
| !!! | GTTGTATTGTATATTTATTT+TGG | - | chr1.3:12727645-12727664 | MS.gene067006:CDS | 15.0% |
| !! | ACATGAAAATGTTATTATAG+CGG | + | chr1.3:12727627-12727646 | None:intergenic | 20.0% |
| !! | ATGTATATTAATATGAGTCA+AGG | - | chr1.3:12728550-12728569 | MS.gene067006:CDS | 20.0% |
| !! | CTGTATTTAACAAAACATTA+TGG | - | chr1.3:12727074-12727093 | MS.gene067006:CDS | 20.0% |
| !! | GACATTATGATTACTATTAT+TGG | - | chr1.3:12729127-12729146 | MS.gene067006:CDS | 20.0% |
| !! | TAAGATAAATCTACGAATTT+GGG | + | chr1.3:12727349-12727368 | None:intergenic | 20.0% |
| !! | TATTCATTTGTTTATGGATA+TGG | - | chr1.3:12727426-12727445 | MS.gene067006:CDS | 20.0% |
| !!! | GTTTCTAGTAACATAAATAA+GGG | - | chr1.3:12729105-12729124 | MS.gene067006:CDS | 20.0% |
| ! | AAGATAAATCTACGAATTTG+GGG | + | chr1.3:12727348-12727367 | None:intergenic | 25.0% |
| ! | ACAAAGAAAACCCAAAAAAT+TGG | + | chr1.3:12729175-12729194 | None:intergenic | 25.0% |
| ! | ACTAATTTCACACCAATTAT+TGG | - | chr1.3:12727146-12727165 | MS.gene067006:intron | 25.0% |
| ! | AGAAAATTAGCAATTGATGA+AGG | - | chr1.3:12728829-12728848 | MS.gene067006:intron | 25.0% |
| ! | AGTAACACATTTATTGATCT+TGG | + | chr1.3:12727587-12727606 | None:intergenic | 25.0% |
| ! | ATTATTATGTGTCACACTAT+AGG | - | chr1.3:12727691-12727710 | MS.gene067006:CDS | 25.0% |
| ! | CTAAGATAAATCTACGAATT+TGG | + | chr1.3:12727350-12727369 | None:intergenic | 25.0% |
| ! | GTAAAACAAAAAATGGGAAT+CGG | - | chr1.3:12728751-12728770 | MS.gene067006:intron | 25.0% |
| ! | GTTAAATACAGAATCATGTT+TGG | + | chr1.3:12727065-12727084 | None:intergenic | 25.0% |
| ! | TCTTATGTGATTTGATTGAA+AGG | - | chr1.3:12728374-12728393 | MS.gene067006:CDS | 25.0% |
| ! | TTATTATGTGTCACACTATA+GGG | - | chr1.3:12727692-12727711 | MS.gene067006:CDS | 25.0% |
| ! | TTATTCCAAGTGATAAATTC+AGG | - | chr1.3:12728233-12728252 | MS.gene067006:CDS | 25.0% |
| ! | TTTAACAAAACATTATGGGA+TGG | - | chr1.3:12727079-12727098 | MS.gene067006:CDS | 25.0% |
| !! | GCATACATTCAAGAAAATTT+TGG | - | chr1.3:12727989-12728008 | MS.gene067006:intron | 25.0% |
| !! | TATAAGTAACCAAGAAGTAT+TGG | + | chr1.3:12727672-12727691 | None:intergenic | 25.0% |
| !! | TATGTCAATTGGAAATGTTT+TGG | - | chr1.3:12729023-12729042 | MS.gene067006:intron | 25.0% |
| !! | TATTTTTCTATTCTGTAGGT+AGG | + | chr1.3:12727456-12727475 | None:intergenic | 25.0% |
| !! | TGCATATTTTTCTATTCTGT+AGG | + | chr1.3:12727460-12727479 | None:intergenic | 25.0% |
| !!! | AAATGTTATTATAGCGGATT+TGG | + | chr1.3:12727621-12727640 | None:intergenic | 25.0% |
| !!! | ACATTCAAGAAAATTTTGGT+TGG | - | chr1.3:12727993-12728012 | MS.gene067006:intron | 25.0% |
| !!! | CTTGTTGTGGATTTTTTATA+AGG | + | chr1.3:12728417-12728436 | None:intergenic | 25.0% |
| !!! | GGTTTCTAGTAACATAAATA+AGG | - | chr1.3:12729104-12729123 | MS.gene067006:CDS | 25.0% |
| !!! | TACTATTATTGGCTTCTTTT+TGG | - | chr1.3:12729138-12729157 | MS.gene067006:CDS | 25.0% |
| AGCTTCTTCATTCTATGTTA+AGG | - | chr1.3:12728075-12728094 | MS.gene067006:CDS | 30.0% | |
| ATCAAATCACATAAGAAAGC+CGG | + | chr1.3:12728370-12728389 | None:intergenic | 30.0% | |
| ATCATTCCTGTTATCCAAAT+TGG | + | chr1.3:12728529-12728548 | None:intergenic | 30.0% | |
| ATGAAGAACTTCATAACCAA+TGG | - | chr1.3:12728449-12728468 | MS.gene067006:CDS | 30.0% | |
| ATGCCATCATTAATGACATT+TGG | + | chr1.3:12728184-12728203 | None:intergenic | 30.0% | |
| ATTCGATTTCAAATCAACTG+TGG | + | chr1.3:12727562-12727581 | None:intergenic | 30.0% | |
| GTTGTTGACAATGTTACTAA+GGG | - | chr1.3:12729063-12729082 | MS.gene067006:intron | 30.0% | |
| TCACCAAATGTCATTAATGA+TGG | - | chr1.3:12728178-12728197 | MS.gene067006:CDS | 30.0% | |
| TCATTCCTGTTATCCAAATT+GGG | + | chr1.3:12728528-12728547 | None:intergenic | 30.0% | |
| TGATACCTGAATTTATCACT+TGG | + | chr1.3:12728241-12728260 | None:intergenic | 30.0% | |
| TGATCAAAATCATCCCAATT+TGG | - | chr1.3:12728512-12728531 | MS.gene067006:CDS | 30.0% | |
| TGTCTTCATGTTCATATCTA+TGG | - | chr1.3:12728039-12728058 | MS.gene067006:intron | 30.0% | |
| TGTTGTTGACAATGTTACTA+AGG | - | chr1.3:12729062-12729081 | MS.gene067006:intron | 30.0% | |
| TTCTTCATTCTATGTTAAGG+TGG | - | chr1.3:12728078-12728097 | MS.gene067006:CDS | 30.0% | |
| TTCTTGAATGTATGCCAAAA+TGG | + | chr1.3:12727984-12728003 | None:intergenic | 30.0% | |
| ! | TCATTAATGACATTTGGTGA+TGG | + | chr1.3:12728178-12728197 | None:intergenic | 30.0% |
| ! | TGTTTTACTCTTAATCGAGT+CGG | + | chr1.3:12728739-12728758 | None:intergenic | 30.0% |
| ! | TTGCAAAGCACTCTAAAAAT+AGG | + | chr1.3:12728340-12728359 | None:intergenic | 30.0% |
| !! | CATCTTTTTCCTTGTTTAGT+TGG | + | chr1.3:12727892-12727911 | None:intergenic | 30.0% |
| !! | TATTTTGGACCAATACTTCT+TGG | - | chr1.3:12727660-12727679 | MS.gene067006:CDS | 30.0% |
| !!! | ATTGATGTTGGCCAATTTTT+TGG | - | chr1.3:12729161-12729180 | MS.gene067006:CDS | 30.0% |
| !!! | CTTTGTTTTAGTAAGGCTTA+TGG | - | chr1.3:12729189-12729208 | MS.gene067006:CDS | 30.0% |
| !!! | GAAAATTTTGGTTGGATTGT+TGG | - | chr1.3:12728001-12728020 | MS.gene067006:intron | 30.0% |
| !!! | GGGTTTTCTTTGTTTTAGTA+AGG | - | chr1.3:12729182-12729201 | MS.gene067006:CDS | 30.0% |
| !!! | TATAGGGAATGCTACTTTTT+TGG | - | chr1.3:12727708-12727727 | MS.gene067006:CDS | 30.0% |
| !!! | TTGATGTTGGCCAATTTTTT+GGG | - | chr1.3:12729162-12729181 | MS.gene067006:CDS | 30.0% |
| AAAAGATGCAGGAATCATAG+AGG | - | chr1.3:12727904-12727923 | MS.gene067006:intron | 35.0% | |
| AAACCATCAAGAATTTGCCT+TGG | + | chr1.3:12728907-12728926 | None:intergenic | 35.0% | |
| AAAGATGCAGGAATCATAGA+GGG | - | chr1.3:12727905-12727924 | MS.gene067006:intron | 35.0% | |
| AGAAGAAAATGAAGGTCAAG+TGG | - | chr1.3:12729224-12729243 | MS.gene067006:CDS | 35.0% | |
| AGTGGAAGGAAATTAGGAAT+AGG | - | chr1.3:12729242-12729261 | MS.gene067006:CDS | 35.0% | |
| ATCATCCCAATTTGGATAAC+AGG | - | chr1.3:12728520-12728539 | MS.gene067006:CDS | 35.0% | |
| ATCCTCACCTTACAAATCAA+CGG | - | chr1.3:12727302-12727321 | MS.gene067006:CDS | 35.0% | |
| CCAAAATGGTCATTCCAATT+AGG | + | chr1.3:12727970-12727989 | None:intergenic | 35.0% | |
| CTAAACAAGGAAAAAGATGC+AGG | - | chr1.3:12727893-12727912 | MS.gene067006:CDS | 35.0% | |
| CTACTTGATCAATTGTGCAA+AGG | + | chr1.3:12728477-12728496 | None:intergenic | 35.0% | |
| GATATGAACATGAAGACAAC+AGG | + | chr1.3:12728037-12728056 | None:intergenic | 35.0% | |
| GCAAGAAATGCACCAATAAT+TGG | + | chr1.3:12727161-12727180 | None:intergenic | 35.0% | |
| GCTTCATTAGCAATTGTAGA+AGG | - | chr1.3:12728799-12728818 | MS.gene067006:intron | 35.0% | |
| GGATTATAACACAGTCATAG+AGG | + | chr1.3:12728690-12728709 | None:intergenic | 35.0% | |
| GGTTATGAAGTTCTTCATCT+TGG | + | chr1.3:12728447-12728466 | None:intergenic | 35.0% | |
| TACAACAATGTGCACTTGAA+TGG | + | chr1.3:12728274-12728293 | None:intergenic | 35.0% | |
| TATGTTAAGGTGGAACCAAA+AGG | - | chr1.3:12728088-12728107 | MS.gene067006:CDS | 35.0% | |
| TCTCTATGCTTAATCTCCAT+TGG | - | chr1.3:12727824-12727843 | MS.gene067006:CDS | 35.0% | |
| TGGTTCTCTTTACAGTACTA+TGG | - | chr1.3:12728659-12728678 | MS.gene067006:intron | 35.0% | |
| TGTAAGGGAGAAGAAAATGA+AGG | - | chr1.3:12729216-12729235 | MS.gene067006:CDS | 35.0% | |
| TTGTGAACATGTCAGTTATG+TGG | - | chr1.3:12728875-12728894 | MS.gene067006:intron | 35.0% | |
| TTTCGAAGTTCGAAGTAATG+TGG | + | chr1.3:12728612-12728631 | None:intergenic | 35.0% | |
| TTTGACAATGTGTGTGTAAC+TGG | - | chr1.3:12727273-12727292 | MS.gene067006:intron | 35.0% | |
| TTTGGTTGGATTGTTGGATT+TGG | - | chr1.3:12728007-12728026 | MS.gene067006:intron | 35.0% | |
| ! | CCTAATTGGAATGACCATTT+TGG | - | chr1.3:12727967-12727986 | MS.gene067006:intron | 35.0% |
| ! | GCTTCTTTTTGGATTGATGT+TGG | - | chr1.3:12729149-12729168 | MS.gene067006:CDS | 35.0% |
| ! | GGCTTTATAGAATTTCCACA+AGG | - | chr1.3:12728850-12728869 | MS.gene067006:intron | 35.0% |
| ! | GGTTTTGCTGAAGCTTTTAA+TGG | - | chr1.3:12728922-12728941 | MS.gene067006:intron | 35.0% |
| ! | TCACTAATCACATTGCCTTT+TGG | + | chr1.3:12728106-12728125 | None:intergenic | 35.0% |
| ! | TCATAGAGGGCTACTTTAAT+TGG | - | chr1.3:12727918-12727937 | MS.gene067006:intron | 35.0% |
| ! | TCATTTTCTTCTCCCTTACA+AGG | + | chr1.3:12729216-12729235 | None:intergenic | 35.0% |
| ! | TCTGGATTAGGTATGTCAAT+TGG | - | chr1.3:12729012-12729031 | MS.gene067006:intron | 35.0% |
| !! | AGCAAAACCGTTGATTTGTA+AGG | + | chr1.3:12727312-12727331 | None:intergenic | 35.0% |
| !! | CATTTGGTGATGGTAATTTG+AGG | + | chr1.3:12728168-12728187 | None:intergenic | 35.0% |
| !! | TTTCTTGCTGATTCCTACTT+TGG | - | chr1.3:12727173-12727192 | MS.gene067006:intron | 35.0% |
| !!! | GTCTTAGTTTTGATGCTGAT+GGG | + | chr1.3:12728711-12728730 | None:intergenic | 35.0% |
| AAAGCTAGCTGTGATGTTGT+GGG | + | chr1.3:12727794-12727813 | None:intergenic | 40.0% | |
| AAGGCTTATGGTCCTTGTAA+GGG | - | chr1.3:12729201-12729220 | MS.gene067006:CDS | 40.0% | |
| AGGTCAAGTGGAAGGAAATT+AGG | - | chr1.3:12729236-12729255 | MS.gene067006:CDS | 40.0% | |
| AGTGCTTTGCAATCACTAAC+CGG | - | chr1.3:12728348-12728367 | MS.gene067006:CDS | 40.0% | |
| AGTGTAGCATCAACACTTTC+TGG | - | chr1.3:12728994-12729013 | MS.gene067006:intron | 40.0% | |
| CTCATAGTGATAGGATCACA+AGG | + | chr1.3:12727761-12727780 | None:intergenic | 40.0% | |
| GAAAATGAAGGTCAAGTGGA+AGG | - | chr1.3:12729228-12729247 | MS.gene067006:CDS | 40.0% | |
| GACAATGTTACTAAGGGAGA+GGG | - | chr1.3:12729069-12729088 | MS.gene067006:intron | 40.0% | |
| GCATCAACACTTTCTGGATT+AGG | - | chr1.3:12729000-12729019 | MS.gene067006:intron | 40.0% | |
| GCTACACTAGACATAGATTG+AGG | + | chr1.3:12728982-12729001 | None:intergenic | 40.0% | |
| GTTTAGTTGGTCAATGCCAA+AGG | + | chr1.3:12727879-12727898 | None:intergenic | 40.0% | |
| TAAGGCTTATGGTCCTTGTA+AGG | - | chr1.3:12729200-12729219 | MS.gene067006:CDS | 40.0% | |
| TCTTGGTTGAGATCTTGTTG+TGG | + | chr1.3:12728430-12728449 | None:intergenic | 40.0% | |
| TGACAATGTTACTAAGGGAG+AGG | - | chr1.3:12729068-12729087 | MS.gene067006:intron | 40.0% | |
| TGATAGGATCACAAGGACTA+AGG | + | chr1.3:12727754-12727773 | None:intergenic | 40.0% | |
| TTGGACCTATGCTTTAACAG+CGG | - | chr1.3:12727937-12727956 | MS.gene067006:intron | 40.0% | |
| ! | GCTGAAGCTTTTAATGGTGT+TGG | - | chr1.3:12728928-12728947 | MS.gene067006:intron | 40.0% |
| !! | AACCGTTGATTTGTAAGGTG+AGG | + | chr1.3:12727307-12727326 | None:intergenic | 40.0% |
| !! | TGGCATTGACCAACTAAACA+AGG | - | chr1.3:12727880-12727899 | MS.gene067006:CDS | 40.0% |
| !!! | CGTCTTAGTTTTGATGCTGA+TGG | + | chr1.3:12728712-12728731 | None:intergenic | 40.0% |
| AATTAGTAGCTGCTGACCAG+AGG | + | chr1.3:12727133-12727152 | None:intergenic | 45.0% | |
| AGCTTCAGTGGCAACATTCA+TGG | - | chr1.3:12728639-12728658 | MS.gene067006:intron | 45.0% | |
| CAATTGTGCAAAGGCTCCAT+TGG | + | chr1.3:12728468-12728487 | None:intergenic | 45.0% | |
| CGAAGTTCGAAGTAATGTGG+CGG | + | chr1.3:12728609-12728628 | None:intergenic | 45.0% | |
| CTACTAATGTGATCCTCCTC+TGG | - | chr1.3:12727114-12727133 | MS.gene067006:intron | 45.0% | |
| CTGCCAAGGCAAATTCTTGA+TGG | - | chr1.3:12728901-12728920 | MS.gene067006:intron | 45.0% | |
| GAAAGCTAGCTGTGATGTTG+TGG | + | chr1.3:12727795-12727814 | None:intergenic | 45.0% | |
| GACAATGTGTGTGTAACTGG+TGG | - | chr1.3:12727276-12727295 | MS.gene067006:intron | 45.0% | |
| GACATGTTCACAACACCTTG+TGG | + | chr1.3:12728868-12728887 | None:intergenic | 45.0% | |
| GAGTTGCAGCTCATAGTGAT+AGG | + | chr1.3:12727770-12727789 | None:intergenic | 45.0% | |
| GGATCACAAGGACTAAGGTT+TGG | + | chr1.3:12727749-12727768 | None:intergenic | 45.0% | |
| GTCAATGCCAAAGGCTAAAG+AGG | + | chr1.3:12727870-12727889 | None:intergenic | 45.0% | |
| TGCTTAATCTCCATTGGAGC+TGG | - | chr1.3:12727830-12727849 | MS.gene067006:CDS | 45.0% | |
| TGGCATGTACTTCTGTGACA+AGG | - | chr1.3:12728198-12728217 | MS.gene067006:CDS | 45.0% | |
| TGTTACTAAGGGAGAGGGAA+AGG | - | chr1.3:12729074-12729093 | MS.gene067006:CDS | 45.0% | |
| TTAATCTCCATTGGAGCTGG+TGG | - | chr1.3:12727833-12727852 | MS.gene067006:CDS | 45.0% | |
| ! | AGAGCTTCCTCTTTAGCCTT+TGG | - | chr1.3:12727860-12727879 | MS.gene067006:CDS | 45.0% |
| AATGTTGCCACTGAAGCTGC+GGG | + | chr1.3:12728637-12728656 | None:intergenic | 50.0% | |
| AGCAAGCCAAATGCGATGGT+AGG | + | chr1.3:12727206-12727225 | None:intergenic | 50.0% | |
| AGGGAGAGGGAAAGGAAAGT+TGG | - | chr1.3:12729082-12729101 | MS.gene067006:CDS | 50.0% | |
| AGTAATGTGGCGGTTCATGG+AGG | + | chr1.3:12728599-12728618 | None:intergenic | 50.0% | |
| CAGTTATGTGGCTACTGCCA+AGG | - | chr1.3:12728887-12728906 | MS.gene067006:intron | 50.0% | |
| CGAAGTAATGTGGCGGTTCA+TGG | + | chr1.3:12728602-12728621 | None:intergenic | 50.0% | |
| GAATGTTGCCACTGAAGCTG+CGG | + | chr1.3:12728638-12728657 | None:intergenic | 50.0% | |
| GAGAAGCAAGCCAAATGCGA+TGG | + | chr1.3:12727210-12727229 | None:intergenic | 50.0% | |
| GCAAGCCAAATGCGATGGTA+GGG | + | chr1.3:12727205-12727224 | None:intergenic | 50.0% | |
| GGGAGAGGGAAAGGAAAGTT+GGG | - | chr1.3:12729083-12729102 | MS.gene067006:CDS | 50.0% | |
| TCTTACACCACCAGCTCCAA+TGG | + | chr1.3:12727843-12727862 | None:intergenic | 50.0% | |
| TGCAGCCGCTGTTAAAGCAT+AGG | + | chr1.3:12727945-12727964 | None:intergenic | 50.0% | |
| ACAGCGGCTGCAGTCCTAAT+TGG | - | chr1.3:12727953-12727972 | MS.gene067006:intron | 55.0% | |
| ATGTTGCCACTGAAGCTGCG+GGG | + | chr1.3:12728636-12728655 | None:intergenic | 55.0% | |
| CGCTACCCTACCATCGCATT+TGG | - | chr1.3:12727197-12727216 | MS.gene067006:intron | 55.0% | |
| GGTAGGGTAGCGACCAAAGT+AGG | + | chr1.3:12727189-12727208 | None:intergenic | 55.0% | |
| TAGTAGCTGCTGACCAGAGG+AGG | + | chr1.3:12727130-12727149 | None:intergenic | 55.0% | |
| CGAAATCCCCGCAGCTTCAG+TGG | - | chr1.3:12728627-12728646 | MS.gene067006:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 12727041 | 12729267 | 12727041 | ID=MS.gene067006 |
| chr1.3 | mRNA | 12727041 | 12729267 | 12727041 | ID=MS.gene067006.t1;Parent=MS.gene067006 |
| chr1.3 | exon | 12729070 | 12729267 | 12729070 | ID=MS.gene067006.t1.exon1;Parent=MS.gene067006.t1 |
| chr1.3 | CDS | 12729070 | 12729267 | 12729070 | ID=cds.MS.gene067006.t1;Parent=MS.gene067006.t1 |
| chr1.3 | exon | 12728054 | 12728595 | 12728054 | ID=MS.gene067006.t1.exon2;Parent=MS.gene067006.t1 |
| chr1.3 | CDS | 12728054 | 12728595 | 12728054 | ID=cds.MS.gene067006.t1;Parent=MS.gene067006.t1 |
| chr1.3 | exon | 12727287 | 12727912 | 12727287 | ID=MS.gene067006.t1.exon3;Parent=MS.gene067006.t1 |
| chr1.3 | CDS | 12727287 | 12727912 | 12727287 | ID=cds.MS.gene067006.t1;Parent=MS.gene067006.t1 |
| chr1.3 | exon | 12727041 | 12727108 | 12727041 | ID=MS.gene067006.t1.exon4;Parent=MS.gene067006.t1 |
| chr1.3 | CDS | 12727041 | 12727108 | 12727041 | ID=cds.MS.gene067006.t1;Parent=MS.gene067006.t1 |
| Gene Sequence |
| Protein sequence |
