AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene061100


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene061100.t1 MTR_1g035040 90.364 1318 78 11 1 1297 1 1290 0.0 2164
MS.gene061100.t1 MTR_4g132200 27.290 513 311 14 689 1183 42 510 2.49e-26 116
MS.gene061100.t1 MTR_2g085330 25.166 453 271 12 718 1153 82 483 1.51e-22 104
MS.gene061100.t1 MTR_2g085330 25.166 453 271 12 718 1153 147 548 5.45e-22 103
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene061100.t1 AT1G20970 43.028 667 293 19 678 1284 713 1352 3.35e-111 381
MS.gene061100.t1 AT4G27500 27.484 473 283 14 719 1173 79 509 1.18e-17 88.6
MS.gene061100.t1 AT4G27500 27.484 473 283 14 719 1173 79 509 3.32e-17 87.4

Find 267 sgRNAs with CRISPR-Local

Find 355 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTACTTGTCTGGCTTATTTC+AGG 0.180645 1.4:-19292628 None:intergenic
CTCTTAGCTGTTTCCTTTGA+AGG 0.226660 1.4:-19289830 None:intergenic
GAAATTCCAGTTGATGTTAA+TGG 0.242869 1.4:+19289362 MS.gene061100:CDS
TTCAGCTTCAATTGAAATTT+CGG 0.262228 1.4:-19290152 None:intergenic
TCACGAAAGCGAAAATCTTT+TGG 0.273606 1.4:+19288923 MS.gene061100:CDS
TAGTTATTGCTTCTGCCTTC+AGG 0.274660 1.4:-19291238 None:intergenic
TTTGTTCTCACAGGTTCATT+AGG 0.278894 1.4:-19292742 None:intergenic
TCACCTTCATCAGCAGGTTC+TGG 0.286536 1.4:-19289662 None:intergenic
TCCTTTGTATTAACAGTAAC+AGG 0.287802 1.4:-19292574 None:intergenic
AGCTGAAAGCCTGGCTAAAA+AGG 0.291793 1.4:+19290501 MS.gene061100:CDS
TACAATTGTTGAAAATGATT+TGG 0.305290 1.4:+19289481 MS.gene061100:CDS
GTGGGTTCTAATTGCAGTTC+TGG 0.310673 1.4:+19293470 MS.gene061100:CDS
TCCGATTCGCCGACATCAAC+AGG 0.311275 1.4:-19289623 None:intergenic
CGCCATTTCAGTTGAAGGTT+CGG 0.311872 1.4:-19289858 None:intergenic
CGCCATTTCAGTTGAAGGTT+CGG 0.311872 1.4:-19289894 None:intergenic
CATCAGTGGCAGATGCTTCT+TGG 0.313490 1.4:-19290297 None:intergenic
TGAAGTTTCAATTGATGTTT+CGG 0.313983 1.4:-19290122 None:intergenic
CGAAATTCGTGATGTTGAAT+TGG 0.315573 1.4:+19288956 MS.gene061100:CDS
GGAAGAGGAGCAGATCTTAA+AGG 0.315964 1.4:+19292768 MS.gene061100:CDS
CCCTCAGCTAGTTCCGTTGA+AGG 0.318173 1.4:-19289935 None:intergenic
CCAACAAAGGGCTCTCTATA+AGG 0.325558 1.4:+19292906 MS.gene061100:CDS
TGAAAATCTTGATGTTGAAT+TGG 0.335231 1.4:+19289025 MS.gene061100:CDS
TTTGCTTCAATAGTTTGATT+TGG 0.337754 1.4:-19290973 None:intergenic
TGCATTGTTTAATCTATTCA+TGG 0.338109 1.4:-19290755 None:intergenic
AGATCTTCATTTCAAAGCTT+TGG 0.338307 1.4:+19293534 MS.gene061100:CDS
TTCAGCTTCAACTGAAGTTT+CGG 0.341890 1.4:-19290086 None:intergenic
GGCCATTCTATTGGTTGGTC+CGG 0.347271 1.4:+19290383 MS.gene061100:CDS
CCTTATAGAGAGCCCTTTGT+TGG 0.350120 1.4:-19292906 None:intergenic
AGCTAGTTCCGTTGAAGGTT+CGG 0.350167 1.4:-19289930 None:intergenic
GTCTAATATTATTGCAAAAC+AGG 0.352653 1.4:+19291009 MS.gene061100:CDS
TGAATCCATCTCTTGTCGTT+TGG 0.352770 1.4:-19290722 None:intergenic
TGCCTCTTGACGAGTGTTAT+CGG 0.370866 1.4:-19291330 None:intergenic
CAAACTCCATTAACATCAAC+TGG 0.376525 1.4:-19289368 None:intergenic
GGTAAGGAAATTTCTGTTAA+CGG 0.377145 1.4:+19288372 MS.gene061100:CDS
TGAGGTGAGAGACATTAAAA+AGG 0.378776 1.4:+19289709 MS.gene061100:CDS
TCCACCGCCATTTCAGTTGA+AGG 0.384276 1.4:-19289899 None:intergenic
TAATCAAGTGGATGAGGTTA+TGG 0.384901 1.4:+19291292 MS.gene061100:CDS
GCCGACGTCGTCGGTGTTAT+CGG 0.390676 1.4:-19288280 None:intergenic
GTTGAGTCTGTCTCTGATAA+TGG 0.391317 1.4:+19289515 MS.gene061100:CDS
TGTTGAAAATGATTTGGATA+AGG 0.392492 1.4:+19289487 MS.gene061100:CDS
TTGGAAAGTGTAGCTGTTCC+TGG 0.396775 1.4:+19289044 MS.gene061100:CDS
TGAAAATCGTGATGTTCAAT+TGG 0.402656 1.4:+19289229 MS.gene061100:CDS
GGAGAAAAGAGCAAAGAAGA+AGG 0.403456 1.4:+19293209 MS.gene061100:CDS
TTCAATTGAAGCTGAACCTT+CGG 0.405082 1.4:+19290159 MS.gene061100:CDS
ATCAGTGGCAGATGCTTCTT+GGG 0.406247 1.4:-19290296 None:intergenic
TCCTGTTGATGTCGGCGAAT+CGG 0.406322 1.4:+19289622 MS.gene061100:CDS
TCCACCGCCATTTCAGTTGA+AGG 0.410508 1.4:-19289863 None:intergenic
TCTTCCTCCTTTGTTCTCAC+AGG 0.410719 1.4:-19292751 None:intergenic
AAGGTTTGTGAAAACGGTTC+GGG 0.410816 1.4:+19288561 MS.gene061100:CDS
AGCAGATCGAGTTTCTCGTT+GGG 0.417105 1.4:+19292693 MS.gene061100:CDS
TGGTGAGGAGGCCATTCTAT+TGG 0.417655 1.4:+19290374 MS.gene061100:CDS
TTCAGTGAAGGCAGGAATCA+TGG 0.421582 1.4:-19292479 None:intergenic
GTCTGTCTCTGATAATGGTT+TGG 0.425968 1.4:+19289520 MS.gene061100:CDS
CAGTCTCCTCACTGTACTCC+TGG 0.426440 1.4:-19292413 None:intergenic
CTTATAGAGAGCCCTTTGTT+GGG 0.427096 1.4:-19292905 None:intergenic
CTTGTCAGAGTTTCAGAGCT+AGG 0.427351 1.4:-19293297 None:intergenic
GTCTGTCTCTGATAATGGTT+TGG 0.429116 1.4:+19289559 MS.gene061100:CDS
GCAGATCTTAAAGGCTGAAC+AGG 0.431822 1.4:+19292777 MS.gene061100:CDS
GTCGAGTCTGTCTCTGATAA+TGG 0.436999 1.4:+19289554 MS.gene061100:CDS
GATAATGCTGTCAAAGTTGA+AGG 0.440799 1.4:+19289752 MS.gene061100:CDS
TTCAGTTGAAGCTGAAACTT+CGG 0.441108 1.4:+19290093 MS.gene061100:CDS
CTTCACCAGGATTAAGCGTT+CGG 0.443035 1.4:-19292450 None:intergenic
TTCAGCTTCAATAGAGGTCT+CGG 0.449069 1.4:-19290206 None:intergenic
AGGAGACTGCAAACTTTAGA+TGG 0.449667 1.4:+19292427 MS.gene061100:CDS
TAAACAATGCAATTTCTGTC+GGG 0.451272 1.4:+19290767 MS.gene061100:CDS
GAAGGTTTGTGAAAACGGTT+CGG 0.455475 1.4:+19288560 MS.gene061100:CDS
GGACAAGAGTGATCGTGAAT+TGG 0.455985 1.4:+19288773 MS.gene061100:CDS
AGTTCAGAAAGGACTATTAC+CGG 0.459259 1.4:+19292383 MS.gene061100:CDS
TTCGGTTGAAGCTGAAACTT+CGG 0.459559 1.4:+19290177 MS.gene061100:CDS
AGATTAAAAGCGATGCAGTT+GGG 0.461269 1.4:+19289795 MS.gene061100:CDS
TGAAAACGGTGGAGAATTGA+AGG 0.465384 1.4:+19288626 MS.gene061100:CDS
TGTACCACAGCCTTGGAAGC+AGG 0.465437 1.4:-19292601 None:intergenic
AAGCGCAATGACAGCGGAGG+AGG 0.466090 1.4:+19288230 None:intergenic
GCCATTCTATTGGTTGGTCC+GGG 0.466811 1.4:+19290384 MS.gene061100:CDS
AGCCGAACCTTCAACTGAAA+TGG 0.466877 1.4:+19289856 MS.gene061100:CDS
AGCCGAACCTTCAACTGAAA+TGG 0.466877 1.4:+19289892 MS.gene061100:CDS
ATTAGGTTCCTTCTCTTCAT+CGG 0.467184 1.4:-19292725 None:intergenic
TCACTTTCACCTTCATCAGC+AGG 0.469730 1.4:-19289668 None:intergenic
TGTCGTGGATGCACAGGACA+TGG 0.474717 1.4:+19290342 MS.gene061100:CDS
AGAAGAAGAAGAAGTGAAGG+TGG 0.475188 1.4:+19288692 MS.gene061100:CDS
GAGAAAAGAGCAAAGAAGAA+GGG 0.479788 1.4:+19293210 MS.gene061100:CDS
GTATCTACATTAACATCAAC+CGG 0.484110 1.4:-19289416 None:intergenic
GAAGAGAAGGTTTGTGAAAA+CGG 0.489020 1.4:+19288555 MS.gene061100:CDS
AAGAAGAAATATGAGGAAGA+AGG 0.489813 1.4:+19291269 MS.gene061100:CDS
TCAAGTTACAGACTTTGAAA+AGG 0.489986 1.4:+19291357 MS.gene061100:CDS
CACAGAGCATTGTAATGGTA+AGG 0.495770 1.4:+19288356 MS.gene061100:CDS
CGATGTTGTTGTTGCTGACG+TGG 0.495959 1.4:+19288752 MS.gene061100:CDS
CAAAGCTGAAGGAAATGAAA+AGG 0.496256 1.4:+19292821 MS.gene061100:CDS
AAATGATTTGGATAAGGTAC+CGG 0.496598 1.4:+19289493 MS.gene061100:CDS
GGAGCGCTTATGTATTGATC+AGG 0.496628 1.4:+19292223 MS.gene061100:CDS
AGAAGAAGAAGTGAAGGTGG+AGG 0.497120 1.4:+19288695 MS.gene061100:CDS
GATGGCCGAACGCTTAATCC+TGG 0.497200 1.4:+19292445 MS.gene061100:CDS
TTAAACAATGCAATTTCTGT+CGG 0.499085 1.4:+19290766 MS.gene061100:CDS
GAAGTTTGAGCTTCAACTGA+AGG 0.499445 1.4:-19290229 None:intergenic
GCTTTCGTGATCTTTAGATT+CGG 0.500492 1.4:-19288910 None:intergenic
CGAAATTCGAGCTGAAAGCC+TGG 0.501002 1.4:+19290492 MS.gene061100:CDS
ACAAGAAGAGAGAGCTGCTA+GGG 0.501119 1.4:+19290687 MS.gene061100:CDS
CTCTGATAATGGTTTGGCAG+AGG 0.502587 1.4:+19289565 MS.gene061100:CDS
AGTTGAACCAGCTGAGAAGA+AGG 0.506135 1.4:+19288998 MS.gene061100:CDS
AGAAGGTAATCAAGTGGATG+AGG 0.511050 1.4:+19291286 MS.gene061100:CDS
CACCGATGTCGTGGATGCAC+AGG 0.512779 1.4:+19290336 MS.gene061100:CDS
AACAGTTGATGTCGTTGAGC+GGG 0.518462 1.4:+19288533 MS.gene061100:CDS
TTCACCTTCACCGCCTTCGA+CGG 0.520919 1.4:-19288304 None:intergenic
TACTCCACCTTTACCGTTAG+CGG 0.521641 1.4:-19288448 None:intergenic
TCAATGAGACTGCAAGAACT+AGG 0.522673 1.4:+19292176 MS.gene061100:CDS
ACTATTACCGGTGCAATACC+AGG 0.523046 1.4:+19292395 MS.gene061100:CDS
CAAATCCAAACGACAAGAGA+TGG 0.523125 1.4:+19290717 MS.gene061100:CDS
AAAGGATGAACCTGCTTCCA+AGG 0.524649 1.4:+19292591 MS.gene061100:CDS
TGCCGAAAAGGCCCAACAAA+GGG 0.525398 1.4:+19292894 MS.gene061100:CDS
TAAGCTCTTTCAGTGAAGGC+AGG 0.525750 1.4:-19292487 None:intergenic
TAATGGTTTGGCAGAGGTTG+AGG 0.525866 1.4:+19289571 MS.gene061100:CDS
ACCACGGTTGCGAATAGCCA+TGG 0.526287 1.4:-19293421 None:intergenic
TGTGAGAACAAAGGAGGAAG+AGG 0.526843 1.4:+19292753 MS.gene061100:CDS
GAGGAGGCCATTCTATTGGT+TGG 0.527307 1.4:+19290378 MS.gene061100:CDS
GAATTTGTGATTGTTGAAAA+CGG 0.528063 1.4:+19288612 MS.gene061100:CDS
GGCGCCGTCGAAGGCGGTGA+AGG 0.530333 1.4:+19288300 MS.gene061100:CDS
GTTGAATTCGTCTCTTACCA+CGG 0.532422 1.4:-19293437 None:intergenic
GAGATTAAAAGCGATGCAGT+TGG 0.532447 1.4:+19289794 MS.gene061100:CDS
TTAGAGGCAGAGTTTCATGC+TGG 0.534107 1.4:-19290928 None:intergenic
AGCAGCAAAGAAGAAATATG+AGG 0.534680 1.4:+19291262 MS.gene061100:CDS
GGCTGAACAGGCGAGGAAGA+AGG 0.534987 1.4:+19292789 MS.gene061100:CDS
GACGACGTCGGCGCCGTCGA+AGG 0.536151 1.4:+19288291 MS.gene061100:CDS
TCTGCTGACTTCTTCTCTGA+AGG 0.536447 1.4:-19292676 None:intergenic
TAAAGGTGGAGTAGCGGTAG+AGG 0.536539 1.4:+19288458 MS.gene061100:CDS
GGATGAAGTTGAACCTTCAA+AGG 0.536650 1.4:+19289817 MS.gene061100:CDS
AGGAGCACAGGGGAAGAAAG+AGG 0.538909 1.4:+19292196 MS.gene061100:CDS
GACGAATTCAACCATGGATG+TGG 0.539438 1.4:+19293448 MS.gene061100:CDS
TTCTACGGATGCGGTGGAGG+TGG 0.540207 1.4:+19288863 MS.gene061100:CDS
ATCATGGGAGGCTCTTCACC+AGG 0.540568 1.4:-19292463 None:intergenic
TTGTGATAATGCAGATGAGA+AGG 0.542927 1.4:+19289388 MS.gene061100:CDS
CAGCAGATCGAGTTTCTCGT+TGG 0.543874 1.4:+19292692 MS.gene061100:CDS
GAATTGGAAAGTAAAGTTGA+TGG 0.544173 1.4:+19288972 MS.gene061100:CDS
TGATTCTACGGATGCGGTGG+AGG 0.544593 1.4:+19288860 MS.gene061100:CDS
ACCTTCAACTGAAATGGCGG+TGG 0.546923 1.4:+19289862 MS.gene061100:CDS
ACCTTCAACTGAAATGGCGG+TGG 0.546923 1.4:+19289898 MS.gene061100:CDS
ACCTTCAACGGAACTAGCTG+AGG 0.550567 1.4:+19289934 MS.gene061100:CDS
TGATAATCGCGATGTTGAAG+TGG 0.550723 1.4:+19289097 MS.gene061100:CDS
ATTTCTGTTAACGGCAATGT+CGG 0.552571 1.4:+19288381 MS.gene061100:CDS
TGAAACTCTGACAAGAACTC+TGG 0.552572 1.4:+19293305 MS.gene061100:CDS
ACCCGGACCAACCAATAGAA+TGG 0.552856 1.4:-19290385 None:intergenic
ACTGCAAGAACTAGGAGCAC+AGG 0.554158 1.4:+19292184 MS.gene061100:CDS
AAGCATTGAAGAGCAAACTA+AGG 0.554579 1.4:+19291060 MS.gene061100:CDS
GAAAAGGCAATTGCATGAGA+AGG 0.554771 1.4:+19291373 MS.gene061100:CDS
TGTCGTTGAGCGGGAAGAGA+AGG 0.555711 1.4:+19288542 MS.gene061100:CDS
CTCTGATAATGGTTTGGAGA+AGG 0.557027 1.4:+19289526 MS.gene061100:CDS
TTATCAGAGACAGACTCAAC+CGG 0.558273 1.4:-19289512 None:intergenic
TCAGTGAAGGCAGGAATCAT+GGG 0.559798 1.4:-19292478 None:intergenic
TTCGACGGCGCCGACGTCGT+CGG 0.560203 1.4:-19288289 None:intergenic
GAGTGAAGCCGAACCTTCAA+CGG 0.561675 1.4:+19289922 MS.gene061100:CDS
GATTAAAAGCGATGCAGTTG+GGG 0.561913 1.4:+19289796 MS.gene061100:CDS
GCAGATCGAGTTTCTCGTTG+GGG 0.561989 1.4:+19292694 MS.gene061100:CDS
AAGATCACAGAGCATTGTAA+TGG 0.562627 1.4:+19288351 MS.gene061100:CDS
TTTGTAAGCTCTTTCAGTGA+AGG 0.562971 1.4:-19292491 None:intergenic
AGCATCTGCCACTGATGCTG+TGG 0.563886 1.4:+19290303 MS.gene061100:CDS
TGCTGATTCTACGGATGCGG+TGG 0.564790 1.4:+19288857 MS.gene061100:CDS
GAAGTTTCAGCTTCAACCGA+AGG 0.565080 1.4:-19290175 None:intergenic
ACATGGGCTCTGAGGTGGTG+AGG 0.566686 1.4:+19290359 MS.gene061100:CDS
AAACAATGCAATTTCTGTCG+GGG 0.569837 1.4:+19290768 MS.gene061100:CDS
GAAGCTGATTCACTCACTCC+AGG 0.570410 1.4:-19289062 None:intergenic
GAATTCAACCATGGATGTGG+TGG 0.570422 1.4:+19293451 MS.gene061100:CDS
TTGATTATACTCTTTACGAA+GGG 0.572597 1.4:-19290647 None:intergenic
GTTGACGCCGCTAACGGTAA+AGG 0.572603 1.4:+19288441 MS.gene061100:CDS
GGAAGAAGAAGCAAAGCTGA+AGG 0.572743 1.4:+19292810 MS.gene061100:CDS
TGAAGAAGTTGCTGATTCTA+CGG 0.573748 1.4:+19288848 MS.gene061100:CDS
TGAACCTGCTTCCAAGGCTG+TGG 0.577224 1.4:+19292597 MS.gene061100:CDS
TTAACAGTAACAGGTTCTGT+TGG 0.578014 1.4:-19292565 None:intergenic
TGGGCTCTGAGGTGGTGAGG+AGG 0.578182 1.4:+19290362 MS.gene061100:CDS
TAATGGTTTGGAGAAGGTAC+CGG 0.578454 1.4:+19289532 MS.gene061100:CDS
TTCAGTTGAAACTGAGACTG+CGG 0.578726 1.4:+19290057 MS.gene061100:CDS
GGACGAGTCCGATGAAGAGA+AGG 0.579016 1.4:+19292717 MS.gene061100:CDS
TGCCGATAACACTCGTCAAG+AGG 0.579319 1.4:+19291328 MS.gene061100:CDS
GCAGTCTCAGTTTCAACTGA+AGG 0.579813 1.4:-19290055 None:intergenic
CTGCAAGAACTAGGAGCACA+GGG 0.581459 1.4:+19292185 MS.gene061100:CDS
TCAATTCACAAAACAAAGCA+AGG 0.582239 1.4:+19293386 MS.gene061100:CDS
TTGTCATCATCATCGTATCT+CGG 0.583706 1.4:-19290409 None:intergenic
ACTTTGACAGCATTATCTGA+AGG 0.585040 1.4:-19289746 None:intergenic
GGAAATTGAGAAAGCTAAGG+AGG 0.585444 1.4:+19292849 MS.gene061100:CDS
CATCATCGTATCTCGGAACC+CGG 0.585579 1.4:-19290402 None:intergenic
TGCAGATGAGAAGGAAACTC+CGG 0.585869 1.4:+19289397 MS.gene061100:CDS
GTTGATTATACTCTTTACGA+AGG 0.588474 1.4:-19290648 None:intergenic
GAAGAATGACGAGTTCAGAA+AGG 0.589656 1.4:+19292372 MS.gene061100:CDS
GACGTCGGCGCCGTCGAAGG+CGG 0.589960 1.4:+19288294 MS.gene061100:CDS
TGCATCTGCCACCGATGTCG+TGG 0.590159 1.4:+19290327 MS.gene061100:CDS
TGAAGGTTCAGCTTCAATAG+AGG 0.590769 1.4:-19290212 None:intergenic
CAACAGTTGATGTCGTTGAG+CGG 0.591760 1.4:+19288532 MS.gene061100:CDS
AACTTCTCTATCGACAACAT+TGG 0.592698 1.4:-19290029 None:intergenic
ACCTCAGACGTAACAACAGA+AGG 0.593177 1.4:-19289692 None:intergenic
ACAGGGGAAGAAAGAGGACG+TGG 0.593488 1.4:+19292202 MS.gene061100:CDS
CTGTACTCCTGGTATTGCAC+CGG 0.594714 1.4:-19292402 None:intergenic
GTTACCGTTGACGCCGCTAA+CGG 0.594903 1.4:+19288435 MS.gene061100:CDS
GCTTTGAAATGAAGATCTCA+AGG 0.595326 1.4:-19293529 None:intergenic
ATCAGCAACTTCTTCAACAG+CGG 0.597246 1.4:-19288841 None:intergenic
CCACGGTTGCGAATAGCCAT+GGG 0.597835 1.4:-19293420 None:intergenic
ATTAGAACCCACCACATCCA+TGG 0.597877 1.4:-19293459 None:intergenic
GTCGTGGATGCACAGGACAT+GGG 0.598942 1.4:+19290343 MS.gene061100:CDS
GAAGCTCAAACTTCAGCTGA+AGG 0.599070 1.4:+19290238 MS.gene061100:CDS
TACAAGAAGAGAGAGCTGCT+AGG 0.599500 1.4:+19290686 MS.gene061100:CDS
GGATCAAAACGGTGTCGTTG+AGG 0.599562 1.4:+19288716 MS.gene061100:CDS
CTGTGCATCCACGACATCGG+TGG 0.599757 1.4:-19290335 None:intergenic
TGATGCTGAAGTGAGTGAAT+CGG 0.600354 1.4:+19289328 MS.gene061100:CDS
TTCAGGAAGCGCAATGACAG+CGG 0.600797 1.4:+19288224 None:intergenic
AGTTGCTGATTCTACGGATG+CGG 0.604860 1.4:+19288854 MS.gene061100:CDS
TGAGGAAGAAGGTAATCAAG+TGG 0.607579 1.4:+19291280 MS.gene061100:CDS
TGAGGTGAGTGAATGCATCA+AGG 0.610932 1.4:+19289589 MS.gene061100:CDS
TACTCAAAATGATTTAGAGA+AGG 0.612379 1.4:+19289436 MS.gene061100:CDS
GAATTGGAAGGTGTTGAGAA+CGG 0.614129 1.4:+19288789 MS.gene061100:CDS
ATGCCGAAAAGGCCCAACAA+AGG 0.614179 1.4:+19292893 MS.gene061100:CDS
ACATGCTCTTCAACAAGTAG+AGG 0.615781 1.4:+19290450 MS.gene061100:CDS
TGCACAGGACATGGGCTCTG+AGG 0.616154 1.4:+19290351 MS.gene061100:CDS
AGTTACTACTGAAGATGCTG+TGG 0.616914 1.4:+19293245 MS.gene061100:CDS
ACCTGTTACTGTTAATACAA+AGG 0.617247 1.4:+19292573 MS.gene061100:CDS
CAGATCGAGTTTCTCGTTGG+GGG 0.617393 1.4:+19292695 MS.gene061100:CDS
GTTATTTCCCATATAAAACA+AGG 0.618146 1.4:-19293502 None:intergenic
TGTCGGGGATATAGATAGCA+AGG 0.619863 1.4:+19290783 MS.gene061100:CDS
GTCCTGTGCATCCACGACAT+CGG 0.620547 1.4:-19290338 None:intergenic
AGATGCATCCACAGCATCAG+TGG 0.621066 1.4:-19290311 None:intergenic
ACCTTCTGTTGTTACGTCTG+AGG 0.621309 1.4:+19289691 MS.gene061100:CDS
ACACCAGAACCTGCTGATGA+AGG 0.621455 1.4:+19289659 MS.gene061100:CDS
TAGCAACGAATCTGAAGTGA+CGG 0.622394 1.4:+19288485 MS.gene061100:CDS
AAGAGTGATCGTGAATTGGA+AGG 0.623827 1.4:+19288777 MS.gene061100:CDS
AAATCTGCAACATCAACAGA+AGG 0.624188 1.4:-19290001 None:intergenic
AAGCTAAGGAGGCACTGCAA+AGG 0.626684 1.4:+19292860 MS.gene061100:CDS
AGAGGAAATTGAGAAAGCTA+AGG 0.627172 1.4:+19292846 MS.gene061100:CDS
AACGATCGGATCTGAAAGAA+CGG 0.627370 1.4:-19288415 None:intergenic
GTGACGGTTATGAATTCTAA+CGG 0.628599 1.4:+19288501 MS.gene061100:CDS
GTGAAGGTGGAGGATCAAAA+CGG 0.629161 1.4:+19288705 MS.gene061100:CDS
TTTACCGTTAGCGGCGTCAA+CGG 0.629253 1.4:-19288439 None:intergenic
CCCATGGCTATTCGCAACCG+TGG 0.629628 1.4:+19293420 MS.gene061100:CDS
GCGGCGTCAACGGTAACGAT+CGG 0.631102 1.4:-19288429 None:intergenic
GCTTAGAAGTAATCTCCTGA+AGG 0.634976 1.4:+19291223 MS.gene061100:CDS
AGATCGAGTTTCTCGTTGGG+GGG 0.635906 1.4:+19292696 MS.gene061100:CDS
AGGAAGCGCAATGACAGCGG+AGG 0.636017 1.4:+19288227 None:intergenic
TTTGTGATTGTTGAAAACGG+TGG 0.637026 1.4:+19288615 MS.gene061100:CDS
GGTGGTTGATTCTGATGCGG+TGG 0.639793 1.4:+19288881 MS.gene061100:CDS
TCTTAAAGGCTGAACAGGCG+AGG 0.640573 1.4:+19292782 MS.gene061100:CDS
GAACGGAGTTAAAGAGATCG+AGG 0.641304 1.4:+19288806 MS.gene061100:CDS
AGAATTGAAGGAATGTGCGG+TGG 0.642858 1.4:+19288638 MS.gene061100:CDS
GGATGTTGAATTAGAAACCG+TGG 0.645557 1.4:+19289304 MS.gene061100:CDS
AATGTGATTCCTGTTGATGT+CGG 0.646932 1.4:+19289614 MS.gene061100:CDS
ATTGTTTAATCTATTCATGG+TGG 0.647633 1.4:-19290752 None:intergenic
GAAGGAAATGAAAAGGCTAG+AGG 0.651290 1.4:+19292828 MS.gene061100:CDS
CAAGGTAAAAGCTTTACCCA+TGG 0.652268 1.4:+19293404 MS.gene061100:CDS
AAACTATTGAAGCAAAATCG+TGG 0.653029 1.4:+19290980 MS.gene061100:CDS
AAGTGGATGAGGTTATGGCT+CGG 0.657227 1.4:+19291297 MS.gene061100:CDS
AATTCAACCATGGATGTGGT+GGG 0.658178 1.4:+19293452 MS.gene061100:CDS
TTATCAGAGACAGACTCGAC+CGG 0.663571 1.4:-19289551 None:intergenic
TGAACCTGTGAGAACAAAGG+AGG 0.664380 1.4:+19292747 MS.gene061100:CDS
GACGCCGCTAACGGTAAAGG+TGG 0.666548 1.4:+19288444 MS.gene061100:CDS
TAATGAACCTGTGAGAACAA+AGG 0.667584 1.4:+19292744 MS.gene061100:CDS
TCCGATAACACCGACGACGT+CGG 0.667668 1.4:+19288279 MS.gene061100:CDS
CGAACCTTCAACTGAAATGG+CGG 0.668470 1.4:+19289859 MS.gene061100:CDS
CGAACCTTCAACTGAAATGG+CGG 0.668470 1.4:+19289895 MS.gene061100:CDS
GGAGGTGGTTGATTCTGATG+CGG 0.669215 1.4:+19288878 MS.gene061100:CDS
CCTTCAACGGAACTAGCTGA+GGG 0.669399 1.4:+19289935 MS.gene061100:CDS
TTGATGTCGGCGAATCGGAG+AGG 0.675225 1.4:+19289627 MS.gene061100:CDS
CGGAGTTAAAGAGATCGAGG+AGG 0.677412 1.4:+19288809 MS.gene061100:CDS
ACTCACTTCAGCATCAACCA+CGG 0.682834 1.4:-19289321 None:intergenic
GTGAAGGCAGGAATCATGGG+AGG 0.683078 1.4:-19292475 None:intergenic
GAACAATGTAGTGCAGAGTG+AGG 0.684611 1.4:+19289973 MS.gene061100:CDS
TCAGCTTGAGAAACCAGTTG+AGG 0.692737 1.4:+19293338 MS.gene061100:CDS
TAACGGTAAAGGTGGAGTAG+CGG 0.700879 1.4:+19288452 MS.gene061100:CDS
ACAGGACATGGGCTCTGAGG+TGG 0.700930 1.4:+19290354 MS.gene061100:CDS
GTAAGAGACGAATTCAACCA+TGG 0.703137 1.4:+19293442 MS.gene061100:CDS
TTTCAGCTCGAATTTCGTCG+CGG 0.729931 1.4:-19290486 None:intergenic
GCAATACCAGGAGTACAGTG+AGG 0.739249 1.4:+19292407 MS.gene061100:CDS
TGGAGAATTGAAGGAATGTG+CGG 0.744091 1.4:+19288635 MS.gene061100:CDS
TGCAAGAACTAGGAGCACAG+GGG 0.777871 1.4:+19292186 MS.gene061100:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAAAAAAAAAAGTTG+AGG - chr1.4:19291918-19291937 None:intergenic 10.0%
!! TTAAACTAAAATTCATTTAA+CGG + chr1.4:19293135-19293154 MS.gene061100:intron 10.0%
!! AAAAAAGGAATGAAATAGAT+AGG - chr1.4:19291413-19291432 None:intergenic 20.0%
!! CAGTATAAAAATAGTTATCA+TGG - chr1.4:19293095-19293114 None:intergenic 20.0%
!! GATTAAAGAATTTAATGCTT+AGG + chr1.4:19291791-19291810 MS.gene061100:intron 20.0%
!! GTTAGTTAATACAAAAGATA+CGG - chr1.4:19291140-19291159 None:intergenic 20.0%
!! TACAATTGTTGAAAATGATT+TGG + chr1.4:19289481-19289500 MS.gene061100:CDS 20.0%
!! TTAAATTCTTTAATCCACAA+AGG - chr1.4:19291786-19291805 None:intergenic 20.0%
!! TTAGTTAATACAAAAGATAC+GGG - chr1.4:19291139-19291158 None:intergenic 20.0%
!!! AATCTATTCTTTGATTGTTT+TGG + chr1.4:19291500-19291519 MS.gene061100:intron 20.0%
!!! TAGAATGTTATTAGTTTGAT+TGG + chr1.4:19290545-19290564 MS.gene061100:intron 20.0%
!!! TTTGAATGATTAATTTGTTC+AGG + chr1.4:19290624-19290643 MS.gene061100:intron 20.0%
! AAAATATTATCTGCTGAACT+AGG + chr1.4:19291968-19291987 MS.gene061100:intron 25.0%
! ATTGTTTAATCTATTCATGG+TGG - chr1.4:19290755-19290774 None:intergenic 25.0%
! CAAATTGTGATAAATATCTC+TGG - chr1.4:19290829-19290848 None:intergenic 25.0%
! CATTATATTTCCCGAATTAA+TGG + chr1.4:19291104-19291123 MS.gene061100:intron 25.0%
! GAATTTGTGATTGTTGAAAA+CGG + chr1.4:19288612-19288631 MS.gene061100:CDS 25.0%
! GGTAGTTAATTCCATTAATT+CGG - chr1.4:19291118-19291137 None:intergenic 25.0%
! GGTCAATTATCACATTTAAT+GGG - chr1.4:19293074-19293093 None:intergenic 25.0%
! GTAGTTAATTCCATTAATTC+GGG - chr1.4:19291117-19291136 None:intergenic 25.0%
! GTCTAATATTATTGCAAAAC+AGG + chr1.4:19291009-19291028 MS.gene061100:CDS 25.0%
! TACTCAAAATGATTTAGAGA+AGG + chr1.4:19289436-19289455 MS.gene061100:CDS 25.0%
! TGAAAATCTTGATGTTGAAT+TGG + chr1.4:19289025-19289044 MS.gene061100:CDS 25.0%
! TGAAGTTTCAATTGATGTTT+CGG - chr1.4:19290125-19290144 None:intergenic 25.0%
! TGCATTGTTTAATCTATTCA+TGG - chr1.4:19290758-19290777 None:intergenic 25.0%
! TGGTCAATTATCACATTTAA+TGG - chr1.4:19293075-19293094 None:intergenic 25.0%
! TTAAACAATGCAATTTCTGT+CGG + chr1.4:19290766-19290785 MS.gene061100:CDS 25.0%
! TTCAGCTTCAATTGAAATTT+CGG - chr1.4:19290155-19290174 None:intergenic 25.0%
! TTGATTATACTCTTTACGAA+GGG - chr1.4:19290650-19290669 None:intergenic 25.0%
! TTTGCTTCAATAGTTTGATT+TGG - chr1.4:19290976-19290995 None:intergenic 25.0%
!! GTTATTTCCCATATAAAACA+AGG - chr1.4:19293505-19293524 None:intergenic 25.0%
!! TACTCGTTTCAAGTATAAAA+AGG - chr1.4:19292253-19292272 None:intergenic 25.0%
!! TGTACAGAGCAAATATTTTT+GGG + chr1.4:19292139-19292158 MS.gene061100:intron 25.0%
!! TGTTGAAAATGATTTGGATA+AGG + chr1.4:19289487-19289506 MS.gene061100:CDS 25.0%
!! TTATTTTCAGATTCGAAACA+TGG + chr1.4:19290895-19290914 MS.gene061100:intron 25.0%
!!! AATTGCTTTTCTTCTTTTAG+AGG - chr1.4:19290947-19290966 None:intergenic 25.0%
!!! TACATGGTTTTAATTTCCTT+AGG - chr1.4:19291664-19291683 None:intergenic 25.0%
AAACTATTGAAGCAAAATCG+TGG + chr1.4:19290980-19290999 MS.gene061100:CDS 30.0%
AAGAAGAAATATGAGGAAGA+AGG + chr1.4:19291269-19291288 MS.gene061100:CDS 30.0%
AATATTTGCTCTGTACAGTA+TGG - chr1.4:19292136-19292155 None:intergenic 30.0%
ACCTGTTACTGTTAATACAA+AGG + chr1.4:19292573-19292592 MS.gene061100:CDS 30.0%
AGATCTTCATTTCAAAGCTT+TGG + chr1.4:19293534-19293553 MS.gene061100:CDS 30.0%
AGCTGAGAAAAATGAAATTC+GGG + chr1.4:19289283-19289302 MS.gene061100:CDS 30.0%
AGTATTACTTCATGAGTACA+TGG - chr1.4:19291680-19291699 None:intergenic 30.0%
CAGCTGAGAAAAATGAAATT+CGG + chr1.4:19289282-19289301 MS.gene061100:CDS 30.0%
CTGAAAATGAGATATCCATT+GGG - chr1.4:19291826-19291845 None:intergenic 30.0%
GAATTGGAAAGTAAAGTTGA+TGG + chr1.4:19288972-19288991 MS.gene061100:CDS 30.0%
GAGATGTTGATACAACAAAA+AGG - chr1.4:19290863-19290882 None:intergenic 30.0%
GGTAAGGAAATTTCTGTTAA+CGG + chr1.4:19288372-19288391 MS.gene061100:CDS 30.0%
GTATCTACATTAACATCAAC+CGG - chr1.4:19289419-19289438 None:intergenic 30.0%
GTTGATTATACTCTTTACGA+AGG - chr1.4:19290651-19290670 None:intergenic 30.0%
GTTGCTTGTAGAAATTTAGA+TGG + chr1.4:19291638-19291657 MS.gene061100:intron 30.0%
TAAACAATGCAATTTCTGTC+GGG + chr1.4:19290767-19290786 MS.gene061100:CDS 30.0%
TCAATTCACAAAACAAAGCA+AGG + chr1.4:19293386-19293405 MS.gene061100:CDS 30.0%
TCCTTTGTATTAACAGTAAC+AGG - chr1.4:19292577-19292596 None:intergenic 30.0%
TGAAAATCGTGATGTTCAAT+TGG + chr1.4:19289229-19289248 MS.gene061100:CDS 30.0%
TGATACTAATGCCAAATCTA+GGG + chr1.4:19291582-19291601 MS.gene061100:intron 30.0%
TTGATACTAATGCCAAATCT+AGG + chr1.4:19291581-19291600 MS.gene061100:intron 30.0%
! AAATGATTTGGATAAGGTAC+CGG + chr1.4:19289493-19289512 MS.gene061100:CDS 30.0%
! CTGTACAGAGCAAATATTTT+TGG + chr1.4:19292138-19292157 MS.gene061100:intron 30.0%
! GAAATTCCAGTTGATGTTAA+TGG + chr1.4:19289362-19289381 MS.gene061100:CDS 30.0%
! TCAAGTTACAGACTTTGAAA+AGG + chr1.4:19291357-19291376 MS.gene061100:CDS 30.0%
!!! ATCGATTTCTTTTGTTGTTC+AGG - chr1.4:19292544-19292563 None:intergenic 30.0%
!!! ATTGCTGCCTTGTTTTATAT+GGG + chr1.4:19293495-19293514 MS.gene061100:CDS 30.0%
!!! CTTTGTTTTGTGAATTGAGA+TGG - chr1.4:19293384-19293403 None:intergenic 30.0%
!!! TATTGCTGCCTTGTTTTATA+TGG + chr1.4:19293494-19293513 MS.gene061100:CDS 30.0%
!!! TCGATTTCTTTTGTTGTTCA+GGG - chr1.4:19292543-19292562 None:intergenic 30.0%
AAACAATGCAATTTCTGTCG+GGG + chr1.4:19290768-19290787 MS.gene061100:CDS 35.0%
AAATCTGCAACATCAACAGA+AGG - chr1.4:19290004-19290023 None:intergenic 35.0%
AACTTCTCTATCGACAACAT+TGG - chr1.4:19290032-19290051 None:intergenic 35.0%
AATGTGATTCCTGTTGATGT+CGG + chr1.4:19289614-19289633 MS.gene061100:CDS 35.0%
ACAGTATGGTGAACAAAACT+AGG - chr1.4:19292122-19292141 None:intergenic 35.0%
ACTCGATTATTGAGTAGCTA+GGG + chr1.4:19291697-19291716 MS.gene061100:intron 35.0%
ACTTTGACAGCATTATCTGA+AGG - chr1.4:19289749-19289768 None:intergenic 35.0%
AGAAGAAGAAGAAGAAGTGA+AGG + chr1.4:19288689-19288708 MS.gene061100:CDS 35.0%
AGACATTAAAAAGGAGAGTG+AGG + chr1.4:19289718-19289737 MS.gene061100:CDS 35.0%
AGACCAGTATAAGCTAGTAT+TGG - chr1.4:19291617-19291636 None:intergenic 35.0%
AGAGGAAATTGAGAAAGCTA+AGG + chr1.4:19292846-19292865 MS.gene061100:CDS 35.0%
AGATTAAAAGCGATGCAGTT+GGG + chr1.4:19289795-19289814 MS.gene061100:CDS 35.0%
AGCAGCAAAGAAGAAATATG+AGG + chr1.4:19291262-19291281 MS.gene061100:CDS 35.0%
AGTATTTCCCTCAAGGAAAA+AGG - chr1.4:19291442-19291461 None:intergenic 35.0%
AGTTCAGAAAGGACTATTAC+CGG + chr1.4:19292383-19292402 MS.gene061100:CDS 35.0%
ATTAGGTTCCTTCTCTTCAT+CGG - chr1.4:19292728-19292747 None:intergenic 35.0%
ATTTCTGTTAACGGCAATGT+CGG + chr1.4:19288381-19288400 MS.gene061100:CDS 35.0%
CAAACTCCATTAACATCAAC+TGG - chr1.4:19289371-19289390 None:intergenic 35.0%
CAAAGCTGAAGGAAATGAAA+AGG + chr1.4:19292821-19292840 MS.gene061100:CDS 35.0%
CCTGAAAATGAGATATCCAT+TGG - chr1.4:19291827-19291846 None:intergenic 35.0%
CGAAATTCGTGATGTTGAAT+TGG + chr1.4:19288956-19288975 MS.gene061100:CDS 35.0%
GAAGAGAAGGTTTGTGAAAA+CGG + chr1.4:19288555-19288574 MS.gene061100:CDS 35.0%
GAGAAAAGAGCAAAGAAGAA+GGG + chr1.4:19293210-19293229 MS.gene061100:CDS 35.0%
GATAATGCTGTCAAAGTTGA+AGG + chr1.4:19289752-19289771 MS.gene061100:CDS 35.0%
GATACTAATGCCAAATCTAG+GGG + chr1.4:19291583-19291602 MS.gene061100:intron 35.0%
GCTTTCGTGATCTTTAGATT+CGG - chr1.4:19288913-19288932 None:intergenic 35.0%
GTAGAAATTTAGATGGCCTA+AGG + chr1.4:19291645-19291664 MS.gene061100:intron 35.0%
GTATTTCCCTCAAGGAAAAA+GGG - chr1.4:19291441-19291460 None:intergenic 35.0%
GTGACGGTTATGAATTCTAA+CGG + chr1.4:19288501-19288520 MS.gene061100:CDS 35.0%
TAATCAAGTGGATGAGGTTA+TGG + chr1.4:19291292-19291311 MS.gene061100:CDS 35.0%
TAATGAACCTGTGAGAACAA+AGG + chr1.4:19292744-19292763 MS.gene061100:CDS 35.0%
TACTCGATTATTGAGTAGCT+AGG + chr1.4:19291696-19291715 MS.gene061100:intron 35.0%
TAGGCGAATAAACTTGAATG+TGG + chr1.4:19292305-19292324 MS.gene061100:intron 35.0%
TCAGGATTACTGTATCATCT+AGG + chr1.4:19291842-19291861 MS.gene061100:intron 35.0%
TCTTACTGCGCTGTATTATT+AGG + chr1.4:19292286-19292305 MS.gene061100:intron 35.0%
TGAGGTGAGAGACATTAAAA+AGG + chr1.4:19289709-19289728 MS.gene061100:CDS 35.0%
TTAACAGTAACAGGTTCTGT+TGG - chr1.4:19292568-19292587 None:intergenic 35.0%
TTCAATTGAAGCTGAACCTT+CGG + chr1.4:19290159-19290178 MS.gene061100:CDS 35.0%
TTCAGCTTCAACTGAAGTTT+CGG - chr1.4:19290089-19290108 None:intergenic 35.0%
TTCAGTTGAAGCTGAAACTT+CGG + chr1.4:19290093-19290112 MS.gene061100:CDS 35.0%
TTGAGGGAAATACTGTAGAA+AGG + chr1.4:19291448-19291467 MS.gene061100:intron 35.0%
TTGTCATCATCATCGTATCT+CGG - chr1.4:19290412-19290431 None:intergenic 35.0%
TTTCTACAGTATTTCCCTCA+AGG - chr1.4:19291449-19291468 None:intergenic 35.0%
TTTGTAAGCTCTTTCAGTGA+AGG - chr1.4:19292494-19292513 None:intergenic 35.0%
TTTGTGATTGTTGAAAACGG+TGG + chr1.4:19288615-19288634 MS.gene061100:CDS 35.0%
TTTGTTCTCACAGGTTCATT+AGG - chr1.4:19292745-19292764 None:intergenic 35.0%
! CCAATGGATATCTCATTTTC+AGG + chr1.4:19291824-19291843 MS.gene061100:intron 35.0%
! GAAAGCGAAAATCTTTTGGA+TGG + chr1.4:19288927-19288946 MS.gene061100:CDS 35.0%
! GTTCCAATACTAGCTTATAC+TGG + chr1.4:19291611-19291630 MS.gene061100:intron 35.0%
! TCACGAAAGCGAAAATCTTT+TGG + chr1.4:19288923-19288942 MS.gene061100:CDS 35.0%
! TTACTTGTCTGGCTTATTTC+AGG - chr1.4:19292631-19292650 None:intergenic 35.0%
! TTGTGATAATGCAGATGAGA+AGG + chr1.4:19289388-19289407 MS.gene061100:CDS 35.0%
!! AAAAGGAATATGCTGCTTTG+TGG + chr1.4:19291721-19291740 MS.gene061100:intron 35.0%
!! AAGATCACAGAGCATTGTAA+TGG + chr1.4:19288351-19288370 MS.gene061100:CDS 35.0%
!! AAGCATTGAAGAGCAAACTA+AGG + chr1.4:19291060-19291079 MS.gene061100:CDS 35.0%
!! GCTTTGAAATGAAGATCTCA+AGG - chr1.4:19293532-19293551 None:intergenic 35.0%
!! TGAAGAAGTTGCTGATTCTA+CGG + chr1.4:19288848-19288867 MS.gene061100:CDS 35.0%
!!! CGATTTCTTTTGTTGTTCAG+GGG - chr1.4:19292542-19292561 None:intergenic 35.0%
!!! GCTTTTTAGGTTTACTTGTC+TGG - chr1.4:19292642-19292661 None:intergenic 35.0%
AACGATCGGATCTGAAAGAA+CGG - chr1.4:19288418-19288437 None:intergenic 40.0%
AAGAGTGATCGTGAATTGGA+AGG + chr1.4:19288777-19288796 MS.gene061100:CDS 40.0%
AAGGTTTGTGAAAACGGTTC+GGG + chr1.4:19288561-19288580 MS.gene061100:CDS 40.0%
AATTCAACCATGGATGTGGT+GGG + chr1.4:19293452-19293471 MS.gene061100:CDS 40.0%
ACATGCTCTTCAACAAGTAG+AGG + chr1.4:19290450-19290469 MS.gene061100:CDS 40.0%
AGAAGAAGAAGAAGTGAAGG+TGG + chr1.4:19288692-19288711 MS.gene061100:CDS 40.0%
AGAAGCTGAGCAAAAAGAGA+AGG + chr1.4:19292936-19292955 MS.gene061100:CDS 40.0%
AGAAGGTAATCAAGTGGATG+AGG + chr1.4:19291286-19291305 MS.gene061100:CDS 40.0%
AGGAGACTGCAAACTTTAGA+TGG + chr1.4:19292427-19292446 MS.gene061100:CDS 40.0%
AGGCTTACATGAATAGTGTC+TGG + chr1.4:19291862-19291881 MS.gene061100:intron 40.0%
AGTTACTACTGAAGATGCTG+TGG + chr1.4:19293245-19293264 MS.gene061100:CDS 40.0%
ATCAGCAACTTCTTCAACAG+CGG - chr1.4:19288844-19288863 None:intergenic 40.0%
ATGCCTATTTGTGCAGGAAA+GGG + chr1.4:19293188-19293207 MS.gene061100:intron 40.0%
CAAATCCAAACGACAAGAGA+TGG + chr1.4:19290717-19290736 MS.gene061100:CDS 40.0%
CAAGGTAAAAGCTTTACCCA+TGG + chr1.4:19293404-19293423 MS.gene061100:CDS 40.0%
CTTATAGAGAGCCCTTTGTT+GGG - chr1.4:19292908-19292927 None:intergenic 40.0%
GAAAAGGCAATTGCATGAGA+AGG + chr1.4:19291373-19291392 MS.gene061100:CDS 40.0%
GAAGAATGACGAGTTCAGAA+AGG + chr1.4:19292372-19292391 MS.gene061100:CDS 40.0%
GAAGGAAATGAAAAGGCTAG+AGG + chr1.4:19292828-19292847 MS.gene061100:CDS 40.0%
GAAGGTTTGTGAAAACGGTT+CGG + chr1.4:19288560-19288579 MS.gene061100:CDS 40.0%
GAAGTTTGAGCTTCAACTGA+AGG - chr1.4:19290232-19290251 None:intergenic 40.0%
GAGATTAAAAGCGATGCAGT+TGG + chr1.4:19289794-19289813 MS.gene061100:CDS 40.0%
GATTAAAAGCGATGCAGTTG+GGG + chr1.4:19289796-19289815 MS.gene061100:CDS 40.0%
GCTTAGAAGTAATCTCCTGA+AGG + chr1.4:19291223-19291242 MS.gene061100:CDS 40.0%
GGAAAAAGGGCGGAAAAAAA+AGG - chr1.4:19291428-19291447 None:intergenic 40.0%
GGAAATTGAGAAAGCTAAGG+AGG + chr1.4:19292849-19292868 MS.gene061100:CDS 40.0%
GGAGAAAAGAGCAAAGAAGA+AGG + chr1.4:19293209-19293228 MS.gene061100:CDS 40.0%
GGATGAAGTTGAACCTTCAA+AGG + chr1.4:19289817-19289836 MS.gene061100:CDS 40.0%
GGATGTTGAATTAGAAACCG+TGG + chr1.4:19289304-19289323 MS.gene061100:CDS 40.0%
GTAAGAGACGAATTCAACCA+TGG + chr1.4:19293442-19293461 MS.gene061100:CDS 40.0%
GTTGAATTCGTCTCTTACCA+CGG - chr1.4:19293440-19293459 None:intergenic 40.0%
GTTGAGTCTGTCTCTGATAA+TGG + chr1.4:19289515-19289534 MS.gene061100:CDS 40.0%
TAGTTATTGCTTCTGCCTTC+AGG - chr1.4:19291241-19291260 None:intergenic 40.0%
TATTGAGTAGCTAGGGCAAA+AGG + chr1.4:19291704-19291723 MS.gene061100:intron 40.0%
TCAATGAGACTGCAAGAACT+AGG + chr1.4:19292176-19292195 MS.gene061100:CDS 40.0%
TGAAAACGGTGGAGAATTGA+AGG + chr1.4:19288626-19288645 MS.gene061100:CDS 40.0%
TGAAACTCTGACAAGAACTC+TGG + chr1.4:19293305-19293324 MS.gene061100:CDS 40.0%
TGAAGGTTCAGCTTCAATAG+AGG - chr1.4:19290215-19290234 None:intergenic 40.0%
TGAATCCATCTCTTGTCGTT+TGG - chr1.4:19290725-19290744 None:intergenic 40.0%
TGAGGAAGAAGGTAATCAAG+TGG + chr1.4:19291280-19291299 MS.gene061100:CDS 40.0%
TGATAATCGCGATGTTGAAG+TGG + chr1.4:19289097-19289116 MS.gene061100:CDS 40.0%
TGATGCTGAAGTGAGTGAAT+CGG + chr1.4:19289328-19289347 MS.gene061100:CDS 40.0%
TGGAGAATTGAAGGAATGTG+CGG + chr1.4:19288635-19288654 MS.gene061100:CDS 40.0%
TTATCAGAGACAGACTCAAC+CGG - chr1.4:19289515-19289534 None:intergenic 40.0%
TTCAGCTTCAATAGAGGTCT+CGG - chr1.4:19290209-19290228 None:intergenic 40.0%
TTCAGTTGAAACTGAGACTG+CGG + chr1.4:19290057-19290076 MS.gene061100:CDS 40.0%
TTCGGTTGAAGCTGAAACTT+CGG + chr1.4:19290177-19290196 MS.gene061100:CDS 40.0%
TTGAGTGCTTATTCACAACG+AGG + chr1.4:19291540-19291559 MS.gene061100:intron 40.0%
! CTCTTAGCTGTTTCCTTTGA+AGG - chr1.4:19289833-19289852 None:intergenic 40.0%
! GAAAAAGCGTAATGCCGAAA+AGG + chr1.4:19292882-19292901 MS.gene061100:CDS 40.0%
! GCAAGTTTTGCAGGCTTTTT+AGG - chr1.4:19292655-19292674 None:intergenic 40.0%
! GCATTTGCTGCGTACTTTAA+TGG - chr1.4:19291757-19291776 None:intergenic 40.0%
! TAATGGTTTGGAGAAGGTAC+CGG + chr1.4:19289532-19289551 MS.gene061100:CDS 40.0%
! TAGCAACGAATCTGAAGTGA+CGG + chr1.4:19288485-19288504 MS.gene061100:CDS 40.0%
! TCATTTTCCTTCTTCTCAGC+TGG - chr1.4:19289008-19289027 None:intergenic 40.0%
! TTCAGCGATTACAGCTTTTG+AGG + chr1.4:19291186-19291205 MS.gene061100:intron 40.0%
!! AACTGCTTACCTTTTTAGCC+AGG - chr1.4:19290513-19290532 None:intergenic 40.0%
!! ACAGCTTTTGAGGAAGGAAT+TGG + chr1.4:19291196-19291215 MS.gene061100:CDS 40.0%
!! CACAGAGCATTGTAATGGTA+AGG + chr1.4:19288356-19288375 MS.gene061100:CDS 40.0%
!! CTCTGATAATGGTTTGGAGA+AGG + chr1.4:19289526-19289545 MS.gene061100:CDS 40.0%
!! GAATTGGAAGGTGTTGAGAA+CGG + chr1.4:19288789-19288808 MS.gene061100:CDS 40.0%
!! GCACTTACCAATTAGCTTTC+AGG + chr1.4:19292327-19292346 MS.gene061100:intron 40.0%
!! GTCTGTCTCTGATAATGGTT+TGG + chr1.4:19289520-19289539 MS.gene061100:CDS 40.0%
!!! CTGGAGGATGATGTGTTTTT+TGG + chr1.4:19291996-19292015 MS.gene061100:intron 40.0%
AAAGGATGAACCTGCTTCCA+AGG + chr1.4:19292591-19292610 MS.gene061100:CDS 45.0%
AAGTGGATGAGGTTATGGCT+CGG + chr1.4:19291297-19291316 MS.gene061100:CDS 45.0%
ACAAGAAGAGAGAGCTGCTA+GGG + chr1.4:19290687-19290706 MS.gene061100:CDS 45.0%
ACCTCAGACGTAACAACAGA+AGG - chr1.4:19289695-19289714 None:intergenic 45.0%
ACCTTCTGTTGTTACGTCTG+AGG + chr1.4:19289691-19289710 MS.gene061100:CDS 45.0%
ACTATTACCGGTGCAATACC+AGG + chr1.4:19292395-19292414 MS.gene061100:CDS 45.0%
ACTCACTTCAGCATCAACCA+CGG - chr1.4:19289324-19289343 None:intergenic 45.0%
AGAAGAAGAAGTGAAGGTGG+AGG + chr1.4:19288695-19288714 MS.gene061100:CDS 45.0%
AGAATTGAAGGAATGTGCGG+TGG + chr1.4:19288638-19288657 MS.gene061100:CDS 45.0%
AGCAGATCGAGTTTCTCGTT+GGG + chr1.4:19292693-19292712 MS.gene061100:CDS 45.0%
AGCCGAACCTTCAACTGAAA+TGG + chr1.4:19289856-19289875 MS.gene061100:CDS 45.0%
AGCTAGTTCCGTTGAAGGTT+CGG - chr1.4:19289933-19289952 None:intergenic 45.0%
AGCTGAAAGCCTGGCTAAAA+AGG + chr1.4:19290501-19290520 MS.gene061100:CDS 45.0%
AGTTGAACCAGCTGAGAAGA+AGG + chr1.4:19288998-19289017 MS.gene061100:CDS 45.0%
ATCAGTGGCAGATGCTTCTT+GGG - chr1.4:19290299-19290318 None:intergenic 45.0%
ATTAGAACCCACCACATCCA+TGG - chr1.4:19293462-19293481 None:intergenic 45.0%
CATGCCTATTTGTGCAGGAA+AGG + chr1.4:19293187-19293206 MS.gene061100:intron 45.0%
CCAACAAAGGGCTCTCTATA+AGG + chr1.4:19292906-19292925 MS.gene061100:CDS 45.0%
CCTTATAGAGAGCCCTTTGT+TGG - chr1.4:19292909-19292928 None:intergenic 45.0%
CGAACCTTCAACTGAAATGG+CGG + chr1.4:19289859-19289878 MS.gene061100:CDS 45.0%
CGCCATTTCAGTTGAAGGTT+CGG - chr1.4:19289861-19289880 None:intergenic 45.0%
CTCTCAGCCTGAAAGCTAAT+TGG - chr1.4:19292337-19292356 None:intergenic 45.0%
CTGCGTACTTTAATGGCACA+AGG - chr1.4:19291750-19291769 None:intergenic 45.0%
CTTCACCAGGATTAAGCGTT+CGG - chr1.4:19292453-19292472 None:intergenic 45.0%
CTTGTCAGAGTTTCAGAGCT+AGG - chr1.4:19293300-19293319 None:intergenic 45.0%
GAACAATGTAGTGCAGAGTG+AGG + chr1.4:19289973-19289992 MS.gene061100:CDS 45.0%
GAACGGAGTTAAAGAGATCG+AGG + chr1.4:19288806-19288825 MS.gene061100:CDS 45.0%
GAAGCTCAAACTTCAGCTGA+AGG + chr1.4:19290238-19290257 MS.gene061100:CDS 45.0%
GAAGTTTCAGCTTCAACCGA+AGG - chr1.4:19290178-19290197 None:intergenic 45.0%
GAATTCAACCATGGATGTGG+TGG + chr1.4:19293451-19293470 MS.gene061100:CDS 45.0%
GACGAATTCAACCATGGATG+TGG + chr1.4:19293448-19293467 MS.gene061100:CDS 45.0%
GCAGATCTTAAAGGCTGAAC+AGG + chr1.4:19292777-19292796 MS.gene061100:CDS 45.0%
GCAGTCTCAGTTTCAACTGA+AGG - chr1.4:19290058-19290077 None:intergenic 45.0%
GGAACTCATACCCCTAGATT+TGG - chr1.4:19291596-19291615 None:intergenic 45.0%
GGAAGAAGAAGCAAAGCTGA+AGG + chr1.4:19292810-19292829 MS.gene061100:CDS 45.0%
GGAAGAGGAGCAGATCTTAA+AGG + chr1.4:19292768-19292787 MS.gene061100:CDS 45.0%
GGACAAGAGTGATCGTGAAT+TGG + chr1.4:19288773-19288792 MS.gene061100:CDS 45.0%
GGCAATTGCATGAGAAGGTT+TGG + chr1.4:19291378-19291397 MS.gene061100:intron 45.0%
GTCGAGTCTGTCTCTGATAA+TGG + chr1.4:19289554-19289573 MS.gene061100:CDS 45.0%
GTCTGGAGACTAGTGTTAGT+AGG + chr1.4:19291879-19291898 MS.gene061100:intron 45.0%
GTGAAGGTGGAGGATCAAAA+CGG + chr1.4:19288705-19288724 MS.gene061100:CDS 45.0%
GTGCTTATTCACAACGAGGA+AGG + chr1.4:19291544-19291563 MS.gene061100:intron 45.0%
TAACGGTAAAGGTGGAGTAG+CGG + chr1.4:19288452-19288471 MS.gene061100:CDS 45.0%
TAAGCTCTTTCAGTGAAGGC+AGG - chr1.4:19292490-19292509 None:intergenic 45.0%
TACAAGAAGAGAGAGCTGCT+AGG + chr1.4:19290686-19290705 MS.gene061100:CDS 45.0%
TACTCCACCTTTACCGTTAG+CGG - chr1.4:19288451-19288470 None:intergenic 45.0%
TCACTTTCACCTTCATCAGC+AGG - chr1.4:19289671-19289690 None:intergenic 45.0%
TCAGCTTGAGAAACCAGTTG+AGG + chr1.4:19293338-19293357 MS.gene061100:CDS 45.0%
TCAGTGAAGGCAGGAATCAT+GGG - chr1.4:19292481-19292500 None:intergenic 45.0%
TCTCCCTTTCCTGCACAAAT+AGG - chr1.4:19293194-19293213 None:intergenic 45.0%
TCTGCTGAACTAGGTTGTTC+TGG + chr1.4:19291977-19291996 MS.gene061100:intron 45.0%
TCTTCCTCCTTTGTTCTCAC+AGG - chr1.4:19292754-19292773 None:intergenic 45.0%
TGAACCTGTGAGAACAAAGG+AGG + chr1.4:19292747-19292766 MS.gene061100:CDS 45.0%
TGAGGTGAGTGAATGCATCA+AGG + chr1.4:19289589-19289608 MS.gene061100:CDS 45.0%
TGCAGATGAGAAGGAAACTC+CGG + chr1.4:19289397-19289416 MS.gene061100:CDS 45.0%
TGCCTCTTGACGAGTGTTAT+CGG - chr1.4:19291333-19291352 None:intergenic 45.0%
TGTCGGGGATATAGATAGCA+AGG + chr1.4:19290783-19290802 MS.gene061100:CDS 45.0%
TGTGAGAACAAAGGAGGAAG+AGG + chr1.4:19292753-19292772 MS.gene061100:CDS 45.0%
TTAGAGGCAGAGTTTCATGC+TGG - chr1.4:19290931-19290950 None:intergenic 45.0%
TTATCAGAGACAGACTCGAC+CGG - chr1.4:19289554-19289573 None:intergenic 45.0%
TTCAGTGAAGGCAGGAATCA+TGG - chr1.4:19292482-19292501 None:intergenic 45.0%
TTTCAGCTCGAATTTCGTCG+CGG - chr1.4:19290489-19290508 None:intergenic 45.0%
TTTCCCTCAAGGAAAAAGGG+CGG - chr1.4:19291438-19291457 None:intergenic 45.0%
! AACAGTTGATGTCGTTGAGC+GGG + chr1.4:19288533-19288552 MS.gene061100:CDS 45.0%
! AGGTTTTTGTACCACAGCCT+TGG - chr1.4:19292611-19292630 None:intergenic 45.0%
! CAACAGTTGATGTCGTTGAG+CGG + chr1.4:19288532-19288551 MS.gene061100:CDS 45.0%
! GGAGCGCTTATGTATTGATC+AGG + chr1.4:19292223-19292242 MS.gene061100:CDS 45.0%
! GTGGGTTCTAATTGCAGTTC+TGG + chr1.4:19293470-19293489 MS.gene061100:CDS 45.0%
! TAATGGTTTGGCAGAGGTTG+AGG + chr1.4:19289571-19289590 MS.gene061100:CDS 45.0%
! TCTGAAGGAGCAAGTTTTGC+AGG - chr1.4:19292664-19292683 None:intergenic 45.0%
! TTGGAAAGTGTAGCTGTTCC+TGG + chr1.4:19289044-19289063 MS.gene061100:CDS 45.0%
! TTTCCGCCCTTTTTCCTTGA+GGG + chr1.4:19291432-19291451 MS.gene061100:intron 45.0%
! TTTTCCGCCCTTTTTCCTTG+AGG + chr1.4:19291431-19291450 MS.gene061100:intron 45.0%
!! AGTTGCTGATTCTACGGATG+CGG + chr1.4:19288854-19288873 MS.gene061100:CDS 45.0%
!! CTCTGATAATGGTTTGGCAG+AGG + chr1.4:19289565-19289584 MS.gene061100:CDS 45.0%
!! GCGATTACAGCTTTTGAGGA+AGG + chr1.4:19291190-19291209 MS.gene061100:intron 45.0%
!! GCTCGTTTTGTTACCTCAAC+TGG - chr1.4:19293354-19293373 None:intergenic 45.0%
!! TCTGCTGACTTCTTCTCTGA+AGG - chr1.4:19292679-19292698 None:intergenic 45.0%
ACACCAGAACCTGCTGATGA+AGG + chr1.4:19289659-19289678 MS.gene061100:CDS 50.0%
ACCCGGACCAACCAATAGAA+TGG - chr1.4:19290388-19290407 None:intergenic 50.0%
ACCTTCAACGGAACTAGCTG+AGG + chr1.4:19289934-19289953 MS.gene061100:CDS 50.0%
ACCTTCAACTGAAATGGCGG+TGG + chr1.4:19289862-19289881 MS.gene061100:CDS 50.0%
AGATCGAGTTTCTCGTTGGG+GGG + chr1.4:19292696-19292715 MS.gene061100:CDS 50.0%
AGATGCATCCACAGCATCAG+TGG - chr1.4:19290314-19290333 None:intergenic 50.0%
ATGCCGAAAAGGCCCAACAA+AGG + chr1.4:19292893-19292912 MS.gene061100:CDS 50.0%
CAGATCGAGTTTCTCGTTGG+GGG + chr1.4:19292695-19292714 MS.gene061100:CDS 50.0%
CAGCAGATCGAGTTTCTCGT+TGG + chr1.4:19292692-19292711 MS.gene061100:CDS 50.0%
CATCAGTGGCAGATGCTTCT+TGG - chr1.4:19290300-19290319 None:intergenic 50.0%
CATCATCGTATCTCGGAACC+CGG - chr1.4:19290405-19290424 None:intergenic 50.0%
CCATGCATGCCTATTTGTGC+AGG + chr1.4:19293182-19293201 MS.gene061100:intron 50.0%
CCTGCACAAATAGGCATGCA+TGG - chr1.4:19293185-19293204 None:intergenic 50.0%
CCTTCAACGGAACTAGCTGA+GGG + chr1.4:19289935-19289954 MS.gene061100:CDS 50.0%
CGAAATTCGAGCTGAAAGCC+TGG + chr1.4:19290492-19290511 MS.gene061100:CDS 50.0%
CGGAGTTAAAGAGATCGAGG+AGG + chr1.4:19288809-19288828 MS.gene061100:CDS 50.0%
CTGTACTCCTGGTATTGCAC+CGG - chr1.4:19292405-19292424 None:intergenic 50.0%
GAGGAGGCCATTCTATTGGT+TGG + chr1.4:19290378-19290397 MS.gene061100:CDS 50.0%
GAGTGAAGCCGAACCTTCAA+CGG + chr1.4:19289850-19289869 MS.gene061100:CDS 50.0%
GCAAATGCGACACACCTTTG+TGG + chr1.4:19291769-19291788 MS.gene061100:intron 50.0%
GCAGATCGAGTTTCTCGTTG+GGG + chr1.4:19292694-19292713 MS.gene061100:CDS 50.0%
GCTGAACTAGGTTGTTCTGG+AGG + chr1.4:19291980-19291999 MS.gene061100:intron 50.0%
TAAAGGTGGAGTAGCGGTAG+AGG + chr1.4:19288458-19288477 MS.gene061100:CDS 50.0%
TCACCTTCATCAGCAGGTTC+TGG - chr1.4:19289665-19289684 None:intergenic 50.0%
TCCACCGCCATTTCAGTTGA+AGG - chr1.4:19289866-19289885 None:intergenic 50.0%
TCCTGTTGATGTCGGCGAAT+CGG + chr1.4:19289622-19289641 MS.gene061100:CDS 50.0%
TCTTAAAGGCTGAACAGGCG+AGG + chr1.4:19292782-19292801 MS.gene061100:CDS 50.0%
TGCCGAAAAGGCCCAACAAA+GGG + chr1.4:19292894-19292913 MS.gene061100:CDS 50.0%
TGCCGATAACACTCGTCAAG+AGG + chr1.4:19291328-19291347 MS.gene061100:CDS 50.0%
TGGTGAGGAGGCCATTCTAT+TGG + chr1.4:19290374-19290393 MS.gene061100:CDS 50.0%
TTTACCGTTAGCGGCGTCAA+CGG - chr1.4:19288442-19288461 None:intergenic 50.0%
! ACTGCAAGAACTAGGAGCAC+AGG + chr1.4:19292184-19292203 MS.gene061100:CDS 50.0%
! AGCCCTTTGTTGGGCCTTTT+CGG - chr1.4:19292899-19292918 None:intergenic 50.0%
! CGATGTTGTTGTTGCTGACG+TGG + chr1.4:19288752-19288771 MS.gene061100:CDS 50.0%
! CTGCAAGAACTAGGAGCACA+GGG + chr1.4:19292185-19292204 MS.gene061100:CDS 50.0%
! CTTAGGCTGTGTTGACCCAA+TGG + chr1.4:19291808-19291827 MS.gene061100:intron 50.0%
! GAAGCTGATTCACTCACTCC+AGG - chr1.4:19289065-19289084 None:intergenic 50.0%
! GCAATACCAGGAGTACAGTG+AGG + chr1.4:19292407-19292426 MS.gene061100:CDS 50.0%
! GCCATTCTATTGGTTGGTCC+GGG + chr1.4:19290384-19290403 MS.gene061100:CDS 50.0%
! GGAGGTGGTTGATTCTGATG+CGG + chr1.4:19288878-19288897 MS.gene061100:CDS 50.0%
! GGCCATTCTATTGGTTGGTC+CGG + chr1.4:19290383-19290402 MS.gene061100:CDS 50.0%
! TGCAAGAACTAGGAGCACAG+GGG + chr1.4:19292186-19292205 MS.gene061100:CDS 50.0%
!! AAGCTAAGGAGGCACTGCAA+AGG + chr1.4:19292860-19292879 MS.gene061100:CDS 50.0%
!! GGATCAAAACGGTGTCGTTG+AGG + chr1.4:19288716-19288735 MS.gene061100:CDS 50.0%
ACAGGGGAAGAAAGAGGACG+TGG + chr1.4:19292202-19292221 MS.gene061100:CDS 55.0%
ACCACGGTTGCGAATAGCCA+TGG - chr1.4:19293424-19293443 None:intergenic 55.0%
AGCATCTGCCACTGATGCTG+TGG + chr1.4:19290303-19290322 MS.gene061100:CDS 55.0%
ATCATGGGAGGCTCTTCACC+AGG - chr1.4:19292466-19292485 None:intergenic 55.0%
CAGTCTCCTCACTGTACTCC+TGG - chr1.4:19292416-19292435 None:intergenic 55.0%
CCACGGTTGCGAATAGCCAT+GGG - chr1.4:19293423-19293442 None:intergenic 55.0%
CCCTCAGCTAGTTCCGTTGA+AGG - chr1.4:19289938-19289957 None:intergenic 55.0%
GATGGCCGAACGCTTAATCC+TGG + chr1.4:19292445-19292464 MS.gene061100:CDS 55.0%
GGACGAGTCCGATGAAGAGA+AGG + chr1.4:19292717-19292736 MS.gene061100:CDS 55.0%
GTCCTGTGCATCCACGACAT+CGG - chr1.4:19290341-19290360 None:intergenic 55.0%
GTCGTGGATGCACAGGACAT+GGG + chr1.4:19290343-19290362 MS.gene061100:CDS 55.0%
GTGAAGGCAGGAATCATGGG+AGG - chr1.4:19292478-19292497 None:intergenic 55.0%
GTTACCGTTGACGCCGCTAA+CGG + chr1.4:19288435-19288454 MS.gene061100:CDS 55.0%
GTTGACGCCGCTAACGGTAA+AGG + chr1.4:19288441-19288460 MS.gene061100:CDS 55.0%
TCCGATAACACCGACGACGT+CGG + chr1.4:19288279-19288298 MS.gene061100:CDS 55.0%
TGAACCTGCTTCCAAGGCTG+TGG + chr1.4:19292597-19292616 MS.gene061100:CDS 55.0%
TGATTCTACGGATGCGGTGG+AGG + chr1.4:19288860-19288879 MS.gene061100:CDS 55.0%
TGTACCACAGCCTTGGAAGC+AGG - chr1.4:19292604-19292623 None:intergenic 55.0%
TGTCGTGGATGCACAGGACA+TGG + chr1.4:19290342-19290361 MS.gene061100:CDS 55.0%
TGTCGTTGAGCGGGAAGAGA+AGG + chr1.4:19288542-19288561 MS.gene061100:CDS 55.0%
TTCACCTTCACCGCCTTCGA+CGG - chr1.4:19288307-19288326 None:intergenic 55.0%
TTGATGTCGGCGAATCGGAG+AGG + chr1.4:19289627-19289646 MS.gene061100:CDS 55.0%
! AGGAGCACAGGGGAAGAAAG+AGG + chr1.4:19292196-19292215 MS.gene061100:CDS 55.0%
! GGTGGTTGATTCTGATGCGG+TGG + chr1.4:19288881-19288900 MS.gene061100:CDS 55.0%
! TCCGATTCGCCGACATCAAC+AGG - chr1.4:19289626-19289645 None:intergenic 55.0%
!! TGCTGATTCTACGGATGCGG+TGG + chr1.4:19288857-19288876 MS.gene061100:CDS 55.0%
CACCGATGTCGTGGATGCAC+AGG + chr1.4:19290336-19290355 MS.gene061100:CDS 60.0%
CCCATGGCTATTCGCAACCG+TGG + chr1.4:19293420-19293439 MS.gene061100:CDS 60.0%
CTGTGCATCCACGACATCGG+TGG - chr1.4:19290338-19290357 None:intergenic 60.0%
GACGCCGCTAACGGTAAAGG+TGG + chr1.4:19288444-19288463 MS.gene061100:CDS 60.0%
GCGGCGTCAACGGTAACGAT+CGG - chr1.4:19288432-19288451 None:intergenic 60.0%
GGCTGAACAGGCGAGGAAGA+AGG + chr1.4:19292789-19292808 MS.gene061100:CDS 60.0%
TGCACAGGACATGGGCTCTG+AGG + chr1.4:19290351-19290370 MS.gene061100:CDS 60.0%
TGCATCTGCCACCGATGTCG+TGG + chr1.4:19290327-19290346 MS.gene061100:CDS 60.0%
TTCTACGGATGCGGTGGAGG+TGG + chr1.4:19288863-19288882 MS.gene061100:CDS 60.0%
!! ACAGGACATGGGCTCTGAGG+TGG + chr1.4:19290354-19290373 MS.gene061100:CDS 60.0%
!! ACATGGGCTCTGAGGTGGTG+AGG + chr1.4:19290359-19290378 MS.gene061100:CDS 60.0%
!! GCCGACGTCGTCGGTGTTAT+CGG - chr1.4:19288283-19288302 None:intergenic 60.0%
!! TGGGCTCTGAGGTGGTGAGG+AGG + chr1.4:19290362-19290381 MS.gene061100:CDS 65.0%
!! TTCGACGGCGCCGACGTCGT+CGG - chr1.4:19288292-19288311 None:intergenic 70.0%
GACGACGTCGGCGCCGTCGA+AGG + chr1.4:19288291-19288310 MS.gene061100:CDS 75.0%
GACGTCGGCGCCGTCGAAGG+CGG + chr1.4:19288294-19288313 MS.gene061100:CDS 75.0%
GGCGCCGTCGAAGGCGGTGA+AGG + chr1.4:19288300-19288319 MS.gene061100:CDS 75.0%


Chromosome Type Strat End Strand Name
chr1.4 gene 19288237 19293563 19288237 ID=MS.gene061100
chr1.4 mRNA 19288237 19293563 19288237 ID=MS.gene061100.t1;Parent=MS.gene061100
chr1.4 exon 19288237 19290522 19288237 ID=MS.gene061100.t1.exon1;Parent=MS.gene061100.t1
chr1.4 CDS 19288237 19290522 19288237 ID=cds.MS.gene061100.t1;Parent=MS.gene061100.t1
chr1.4 exon 19290646 19290804 19290646 ID=MS.gene061100.t1.exon2;Parent=MS.gene061100.t1
chr1.4 CDS 19290646 19290804 19290646 ID=cds.MS.gene061100.t1;Parent=MS.gene061100.t1
chr1.4 exon 19290905 19291081 19290905 ID=MS.gene061100.t1.exon3;Parent=MS.gene061100.t1
chr1.4 CDS 19290905 19291081 19290905 ID=cds.MS.gene061100.t1;Parent=MS.gene061100.t1
chr1.4 exon 19291191 19291394 19291191 ID=MS.gene061100.t1.exon4;Parent=MS.gene061100.t1
chr1.4 CDS 19291191 19291394 19291191 ID=cds.MS.gene061100.t1;Parent=MS.gene061100.t1
chr1.4 exon 19292146 19292244 19292146 ID=MS.gene061100.t1.exon5;Parent=MS.gene061100.t1
chr1.4 CDS 19292146 19292244 19292146 ID=cds.MS.gene061100.t1;Parent=MS.gene061100.t1
chr1.4 exon 19292349 19292957 19292349 ID=MS.gene061100.t1.exon6;Parent=MS.gene061100.t1
chr1.4 CDS 19292349 19292957 19292349 ID=cds.MS.gene061100.t1;Parent=MS.gene061100.t1
chr1.4 exon 19293204 19293563 19293204 ID=MS.gene061100.t1.exon7;Parent=MS.gene061100.t1
chr1.4 CDS 19293204 19293563 19293204 ID=cds.MS.gene061100.t1;Parent=MS.gene061100.t1
Gene Sequence

>MS.gene061100

ATGACAGCGGAGGAGGTGTTAAACGTACACAGCAAACAAATTTCCGATAACACCGACGACGTCGGCGCCGTCGAAGGCGGTGAAGGTGAAAGTGAAGATCGTAATCACAACAACAAGATCACAGAGCATTGTAATGGTAAGGAAATTTCTGTTAACGGCAATGTCGGTGTTTCTGATTCCGTTCTTTCAGATCCGATCGTTACCGTTGACGCCGCTAACGGTAAAGGTGGAGTAGCGGTAGAGGATCATAGCAACGAATCTGAAGTGACGGTTATGAATTCTAACGGTGAAACGACAACAGTTGATGTCGTTGAGCGGGAAGAGAAGGTTTGTGAAAACGGTTCGGGATCTGATGAGAATAACGTTAATGATGATGAATTTGTGATTGTTGAAAACGGTGGAGAATTGAAGGAATGTGCGGTGGAGAATCTTGTTGAGAATGAGATTCGTAAAGAAGAAGAAGAAGAAGTGAAGGTGGAGGATCAAAACGGTGTCGTTGAGGAGAATGAGATTTGCGATGTTGTTGTTGCTGACGTGGACAAGAGTGATCGTGAATTGGAAGGTGTTGAGAACGGAGTTAAAGAGATCGAGGAGGTTTCTGTTGCCGCTGTTGAAGAAGTTGCTGATTCTACGGATGCGGTGGAGGTGGTTGATTCTGATGCGGTGGAAAGAACCGAATCTAAAGATCACGAAAGCGAAAATCTTTTGGATGGAAAGAACGAAATTCGTGATGTTGAATTGGAAAGTAAAGTTGATGGTGAAGTTGAACCAGCTGAGAAGAAGGAAAATGAAAATCTTGATGTTGAATTGGAAAGTGTAGCTGTTCCTGGAGTGAGTGAATCAGCTTCAGCTGAGAAGAATGATAATCGCGATGTTGAAGTGGAAACTGTAGTTGATTCTGAAGTGAGTGAATCAACTACGAAGAATGAAAATCGTGATGTTGAGTTGAAAACTGTAGTTGATTCTGTAGTGAGTGAATCAGCTGAGAAGAATGAAAATCGTGATGTTCAATTGGAAAGTGTAGTTGATTCTGCAGTGAGTGAATCAGCTGAGAAAAATGAAATTCGGGATGTTGAATTAGAAACCGTGGTTGATGCTGAAGTGAGTGAATCGGTCGAGAAGAATGAAATTCCAGTTGATGTTAATGGAGTTTGTGATAATGCAGATGAGAAGGAAACTCCGGTTGATGTTAATGTAGATACTCAAAATGATTTAGAGAAGGTGTCTGATGAGTCTGTCTCTGATACAATTGTTGAAAATGATTTGGATAAGGTACCGGTTGAGTCTGTCTCTGATAATGGTTTGGAGAAGGTACCGGTCGAGTCTGTCTCTGATAATGGTTTGGCAGAGGTTGAGGTGAGTGAATGCATCAAGGAGAATGTGATTCCTGTTGATGTCGGCGAATCGGAGAGGTCTGTTGAGACACCAGAACCTGCTGATGAAGGTGAAAGTGAACCTTCTGTTGTTACGTCTGAGGTGAGAGACATTAAAAAGGAGAGTGAGGCTGAACCTTCAGATAATGCTGTCAAAGTTGAAGGTGAATCTATTGAAGTCTCTGAGATTAAAAGCGATGCAGTTGGGGATGAAGTTGAACCTTCAAAGGAAACAGCTAAGAGTGAAGCCGAACCTTCAACTGAAATGGCGGTGGAGCGTGAAGCCGAACCTTCAACTGAAATGGCGGTGGAGAGTGAAGCCGAACCTTCAACGGAACTAGCTGAGGGTGAAGCTGAAGTTTTGAACAATGTAGTGCAGAGTGAGGCTGAGCCTTCTGTTGATGTTGCAGATTTGAAAACCAATGTTGTCGATAGAGAAGTTGAACCTTCAGTTGAAACTGAGACTGCGGTTGAAGCCGAAACTTCAGTTGAAGCTGAAACTTCGGTTGAAGCCGAAACATCAATTGAAACTTCAATTGAAGCCGAAATTTCAATTGAAGCTGAACCTTCGGTTGAAGCTGAAACTTCGGTTGAAGCCGAGACCTCTATTGAAGCTGAACCTTCAGTTGAAGCTCAAACTTCAGCTGAAGGTAGCAATCAGACAACAGCTGAAGATTTGAAAACATCCCAAGAAGCATCTGCCACTGATGCTGTGGATGCATCTGCCACCGATGTCGTGGATGCACAGGACATGGGCTCTGAGGTGGTGAGGAGGCCATTCTATTGGTTGGTCCGGGTTCCGAGATACGATGATGATGACAATGTAAAAGAGCAGATTCAACATGCTCTTCAACAAGTAGAGGAGCAGACTAAAATCCGCGACGAAATTCGAGCTGAAAGCCTGGCTAAAAAGGTAAGCAGTTGACACAATATATTAGAATGTTATTAGTTTGATTGGTAAAATAGAATATATCTCTGTTAAATGAAGAACAGTATATGATTTTAGATAATTATTTTGAATGATTAATTTGTTCAGGCCCTTCGTAAAGAGTATAATCAACAATTTAGAGCTGCAGTACAAGAAGAGAGAGCTGCTAGGGAGTTGCTCAAATCCAAACGACAAGAGATGGATTCAGTTCAATCCACCATGAATAGATTAAACAATGCAATTTCTGTCGGGGATATAGATAGCAAGGTAATGCACTCATTTTGTAGTCCAGAGATATTTATCACAATTTGATTCTTATATTCCTTTTTGTTGTATCAACATCTCTAGATTTGTAATTTATTTTCAGATTCGAAACATGGAACACATGATCCAGCATGAAACTCTGCCTCTAAAAGAAGAAAAGCAATTGATTCGCCAAATCAAACTATTGAAGCAAAATCGTGGCGAGCTGTCTAATATTATTGCAAAACAGGATCAATCACAATCTCTCGACGACAAAGAAAGCATTGAAGAGCAAACTAAGGTACTAGAGTCATGTTGCTTTTCATTATATTTCCCGAATTAATGGAATTAACTACCCGTATCTTTTGTATTAACTAACTGAGCATTGTCTTTGACTTAAATATTTTCAGCGATTACAGCTTTTGAGGAAGGAATTGGATGTGCTTAGAAGTAATCTCCTGAAGGCAGAAGCAATAACTAAAGCAGCAAAGAAGAAATATGAGGAAGAAGGTAATCAAGTGGATGAGGTTATGGCTCGGTATAACGCTGCCGATAACACTCGTCAAGAGGCATTTGTCAAGTTACAGACTTTGAAAAGGCAATTGCATGAGAAGGTTTGGTTTTTCTTTCCTATCTATTTCATTCCTTTTTTTTCCGCCCTTTTTCCTTGAGGGAAATACTGTAGAAAGGTATCTGTTTTGTTTATCAGAACAGTACACAATCTATTCTTTGATTGTTTTGGCTTTAATATTCTGAAACTTGAGTGCTTATTCACAACGAGGAAGGTAGTAAGATTTATTTTGATACTAATGCCAAATCTAGGGGTATGAGTTCCAATACTAGCTTATACTGGTCTAGTTGCTTGTAGAAATTTAGATGGCCTAAGGAAATTAAAACCATGTACTCATGAAGTAATACTCGATTATTGAGTAGCTAGGGCAAAAGGAATATGCTGCTTTGTGGTTTCCTTGTGCCATTAAAGTACGCAGCAAATGCGACACACCTTTGTGGATTAAAGAATTTAATGCTTAGGCTGTGTTGACCCAATGGATATCTCATTTTCAGGATTACTGTATCATCTAGGCTTACATGAATAGTGTCTGGAGACTAGTGTTAGTAGGCATACACATATCACCTCAACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAACTTTGCATAAAATATTATCTGCTGAACTAGGTTGTTCTGGAGGATGATGTGTTTTTTGGTGATACATCTTTGATGAATTTAATAACTTTTTCTGTTCTAGAATCAAAACATTTTTAACTTACTCTATAAAAATGTACAATGCTAATAGCAAATGCTTAGCCTAGTTTTGTTCACCATACTGTACAGAGCAAATATTTTTGGGAATACAGAAGTGCTTCAATGAGACTGCAAGAACTAGGAGCACAGGGGAAGAAAGAGGACGTGGAGCGCTTATGTATTGATCAGGTGATCCTTTTTATACTTGAAACGAGTAGAGTTTATCATTCTCTTACTGCGCTGTATTATTAGGCGAATAAACTTGAATGTGGCACTTACCAATTAGCTTTCAGGCTGAGAGAATGCATGAGCTGTTGAAGAATGACGAGTTCAGAAAGGACTATTACCGGTGCAATACCAGGAGTACAGTGAGGAGACTGCAAACTTTAGATGGCCGAACGCTTAATCCTGGTGAAGAGCCTCCCATGATTCCTGCCTTCACTGAAAGAGCTTACAAAAATGATTCTTCAGTTTCGCAGTCAACCCCTGAACAACAAAAGAAATCGATACCAACAGAACCTGTTACTGTTAATACAAAGGATGAACCTGCTTCCAAGGCTGTGGTACAAAAACCTGAAATAAGCCAGACAAGTAAACCTAAAAAGCCTGCAAAACTTGCTCCTTCAGAGAAGAAGTCAGCAGATCGAGTTTCTCGTTGGGGGGACGAGTCCGATGAAGAGAAGGAACCTAATGAACCTGTGAGAACAAAGGAGGAAGAGGAGCAGATCTTAAAGGCTGAACAGGCGAGGAAGAAGGAAGAAGAAGCAAAGCTGAAGGAAATGAAAAGGCTAGAGGAAATTGAGAAAGCTAAGGAGGCACTGCAAAGGAAAAAGCGTAATGCCGAAAAGGCCCAACAAAGGGCTCTCTATAAGGCACAAAAAGAAGCTGAGCAAAAAGAGAAGGTAATGACATTATGAGTTAGACTCTAAAAATGATTAGTTTAATTACACATGTAATCACATTATATTATGATTTCTGTTTGTTGTAATGTGATTCAATATTTCTAAATATCTATCCCATTAAATGTGATAATTGACCATGATAACTATTTTTATACTGCAGAGTAATAGTCAATAAGCTTAAACTAAAATTCATTTAACGGTAGTTCTTCAGCTATATAATATAACCATGCATGCCTATTTGTGCAGGAAAGGGAGAAAAGAGCAAAGAAGAAGGGAAAAAGAAAGACAGTTACTACTGAAGATGCTGTGGAGAATACAGAACAAGATGCTGCAGCTTCTCCTAGCTCTGAAACTCTGACAAGAACTCTGGAAGAATCTGATCAGCTTGAGAAACCAGTTGAGGTAACAAAACGAGCAGTGAAACCATCTCAATTCACAAAACAAAGCAAGGTAAAAGCTTTACCCATGGCTATTCGCAACCGTGGTAAGAGACGAATTCAACCATGGATGTGGTGGGTTCTAATTGCAGTTCTGGTTATTGCTGCCTTGTTTTATATGGGAAATAACAGCTCCTTGAGATCTTCATTTCAAAGCTTTGGTTTTTGA

Protein sequence

>MS.gene061100.t1

MTAEEVLNVHSKQISDNTDDVGAVEGGEGESEDRNHNNKITEHCNGKEISVNGNVGVSDSVLSDPIVTVDAANGKGGVAVEDHSNESEVTVMNSNGETTTVDVVEREEKVCENGSGSDENNVNDDEFVIVENGGELKECAVENLVENEIRKEEEEEVKVEDQNGVVEENEICDVVVADVDKSDRELEGVENGVKEIEEVSVAAVEEVADSTDAVEVVDSDAVERTESKDHESENLLDGKNEIRDVELESKVDGEVEPAEKKENENLDVELESVAVPGVSESASAEKNDNRDVEVETVVDSEVSESTTKNENRDVELKTVVDSVVSESAEKNENRDVQLESVVDSAVSESAEKNEIRDVELETVVDAEVSESVEKNEIPVDVNGVCDNADEKETPVDVNVDTQNDLEKVSDESVSDTIVENDLDKVPVESVSDNGLEKVPVESVSDNGLAEVEVSECIKENVIPVDVGESERSVETPEPADEGESEPSVVTSEVRDIKKESEAEPSDNAVKVEGESIEVSEIKSDAVGDEVEPSKETAKSEAEPSTEMAVEREAEPSTEMAVESEAEPSTELAEGEAEVLNNVVQSEAEPSVDVADLKTNVVDREVEPSVETETAVEAETSVEAETSVEAETSIETSIEAEISIEAEPSVEAETSVEAETSIEAEPSVEAQTSAEGSNQTTAEDLKTSQEASATDAVDASATDVVDAQDMGSEVVRRPFYWLVRVPRYDDDDNVKEQIQHALQQVEEQTKIRDEIRAESLAKKALRKEYNQQFRAAVQEERAARELLKSKRQEMDSVQSTMNRLNNAISVGDIDSKIRNMEHMIQHETLPLKEEKQLIRQIKLLKQNRGELSNIIAKQDQSQSLDDKESIEEQTKRLQLLRKELDVLRSNLLKAEAITKAAKKKYEEEGNQVDEVMARYNAADNTRQEAFVKLQTLKRQLHEKSKYFWEYRSASMRLQELGAQGKKEDVERLCIDQAERMHELLKNDEFRKDYYRCNTRSTVRRLQTLDGRTLNPGEEPPMIPAFTERAYKNDSSVSQSTPEQQKKSIPTEPVTVNTKDEPASKAVVQKPEISQTSKPKKPAKLAPSEKKSADRVSRWGDESDEEKEPNEPVRTKEEEEQILKAEQARKKEEEAKLKEMKRLEEIEKAKEALQRKKRNAEKAQQRALYKAQKEAEQKEKEREKRAKKKGKRKTVTTEDAVENTEQDAAASPSSETLTRTLEESDQLEKPVEVTKRAVKPSQFTKQSKVKALPMAIRNRGKRRIQPWMWWVLIAVLVIAALFYMGNNSSLRSSFQSFGF