Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene067323.t1 | RXI07638.1 | 61.9 | 1121 | 314 | 7 | 13 | 1068 | 18 | 1090 | 0.00E+00 | 1408.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene067323.t1 | O81032 | 65.7 | 554 | 188 | 2 | 520 | 1072 | 39 | 591 | 4.4e-224 | 779.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene067323.t1 | A0A498KIW4 | 61.9 | 1121 | 314 | 7 | 13 | 1068 | 18 | 1090 | 0.0e+00 | 1408.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene060494 | MS.gene067323 | 0.800287 | 1.55E-48 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene067323.t1 | MTR_8g024560 | 96.751 | 554 | 18 | 0 | 520 | 1073 | 29 | 582 | 0.0 | 1119 |
MS.gene067323.t1 | MTR_8g024560 | 76.672 | 583 | 97 | 3 | 1 | 554 | 1 | 573 | 0.0 | 894 |
MS.gene067323.t1 | MTR_5g005540 | 67.514 | 551 | 175 | 4 | 521 | 1070 | 27 | 574 | 0.0 | 771 |
MS.gene067323.t1 | MTR_5g005540 | 59.162 | 573 | 193 | 8 | 12 | 549 | 9 | 575 | 0.0 | 661 |
MS.gene067323.t1 | MTR_1g026710 | 50.893 | 448 | 215 | 3 | 623 | 1070 | 56 | 498 | 1.25e-154 | 469 |
MS.gene067323.t1 | MTR_1g026710 | 43.975 | 473 | 224 | 8 | 119 | 558 | 45 | 509 | 4.82e-119 | 376 |
MS.gene067323.t1 | MTR_7g118100 | 75.556 | 135 | 33 | 0 | 938 | 1072 | 18 | 152 | 4.25e-64 | 214 |
MS.gene067323.t1 | MTR_7g118100 | 64.964 | 137 | 40 | 2 | 418 | 549 | 18 | 151 | 1.79e-46 | 164 |
MS.gene067323.t1 | MTR_1g026680 | 41.636 | 269 | 125 | 2 | 720 | 988 | 58 | 294 | 4.83e-60 | 208 |
MS.gene067323.t1 | MTR_1g026680 | 35.811 | 296 | 131 | 4 | 200 | 468 | 31 | 294 | 2.58e-43 | 160 |
MS.gene067323.t1 | MTR_7g118095 | 60.544 | 147 | 53 | 3 | 1 | 143 | 1 | 146 | 3.75e-50 | 174 |
MS.gene067323.t1 | MTR_7g118095 | 65.812 | 117 | 37 | 2 | 520 | 634 | 31 | 146 | 6.44e-45 | 159 |
MS.gene067323.t1 | MTR_8g024550 | 95.833 | 48 | 2 | 0 | 421 | 468 | 3 | 50 | 9.16e-28 | 107 |
MS.gene067323.t1 | MTR_8g024550 | 75.926 | 54 | 13 | 0 | 941 | 994 | 3 | 56 | 7.36e-26 | 101 |
MS.gene067323.t1 | MTR_6g033475 | 53.465 | 101 | 31 | 2 | 367 | 451 | 86 | 186 | 2.01e-25 | 105 |
MS.gene067323.t1 | MTR_6g033475 | 70.423 | 71 | 20 | 1 | 902 | 971 | 116 | 186 | 3.99e-24 | 101 |
MS.gene067323.t1 | MTR_1g051520 | 46.341 | 82 | 43 | 1 | 380 | 461 | 17 | 97 | 2.24e-17 | 79.0 |
MS.gene067323.t1 | MTR_1g051520 | 42.222 | 90 | 51 | 1 | 892 | 981 | 9 | 97 | 8.59e-17 | 77.4 |
MS.gene067323.t1 | MTR_1g050360 | 25.862 | 174 | 106 | 5 | 556 | 723 | 122 | 278 | 7.88e-11 | 66.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene067323.t1 | AT2G46760 | 65.704 | 554 | 188 | 2 | 520 | 1072 | 39 | 591 | 0.0 | 800 |
MS.gene067323.t1 | AT2G46760 | 57.343 | 572 | 200 | 7 | 13 | 554 | 26 | 583 | 0.0 | 665 |
MS.gene067323.t1 | AT2G46750 | 63.604 | 555 | 200 | 2 | 520 | 1073 | 31 | 584 | 0.0 | 775 |
MS.gene067323.t1 | AT2G46750 | 54.577 | 579 | 222 | 5 | 6 | 554 | 8 | 575 | 0.0 | 646 |
MS.gene067323.t1 | AT5G56490 | 63.849 | 556 | 198 | 3 | 520 | 1073 | 21 | 575 | 0.0 | 763 |
MS.gene067323.t1 | AT5G56490 | 55.382 | 576 | 213 | 8 | 10 | 554 | 4 | 566 | 0.0 | 633 |
MS.gene067323.t1 | AT1G32300 | 62.590 | 556 | 205 | 3 | 520 | 1073 | 22 | 576 | 0.0 | 759 |
MS.gene067323.t1 | AT1G32300 | 54.561 | 592 | 223 | 8 | 10 | 570 | 4 | 580 | 0.0 | 627 |
MS.gene067323.t1 | AT2G46740 | 61.622 | 555 | 211 | 2 | 520 | 1073 | 35 | 588 | 0.0 | 756 |
MS.gene067323.t1 | AT2G46740 | 54.073 | 577 | 224 | 6 | 8 | 554 | 14 | 579 | 0.0 | 637 |
MS.gene067323.t1 | AT5G11540 | 45.390 | 564 | 301 | 4 | 509 | 1070 | 17 | 575 | 7.22e-166 | 501 |
MS.gene067323.t1 | AT5G11540 | 41.509 | 583 | 294 | 9 | 5 | 551 | 7 | 578 | 6.44e-133 | 415 |
MS.gene067323.t1 | AT5G56470 | 61.789 | 246 | 93 | 1 | 829 | 1073 | 5 | 250 | 9.46e-107 | 334 |
MS.gene067323.t1 | AT5G56470 | 48.400 | 250 | 86 | 5 | 349 | 568 | 16 | 252 | 1.23e-65 | 222 |
MS.gene067323.t1 | AT3G47930 | 25.862 | 174 | 106 | 5 | 556 | 723 | 129 | 285 | 1.83e-11 | 68.6 |
MS.gene067323.t1 | AT3G47930 | 25.862 | 174 | 106 | 5 | 556 | 723 | 129 | 285 | 2.07e-11 | 68.6 |
Find 208 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCTTCTGGACATACCAATTT+TGG | 0.164055 | 8.4:+70527100 | None:intergenic |
TCTTCGGGACATACCAATTT+TGG | 0.168977 | 8.4:+70530956 | None:intergenic |
CATAATCGTCTTCAATCTTC+TGG | 0.188911 | 8.4:-70515822 | MS.gene067323:CDS |
ACCATTGCCAGATGTGTTTA+TGG | 0.199281 | 8.4:+70518886 | None:intergenic |
TTTGTAGGTTACTCTAAATT+TGG | 0.208620 | 8.4:-70530209 | MS.gene067323:intron |
AATATCCCATTTGAATCTTC+TGG | 0.225555 | 8.4:+70527085 | None:intergenic |
GAACACTTGATTGGATCTTC+TGG | 0.229468 | 8.4:+70531160 | None:intergenic |
ATTAATGAAGCCTCAAAATA+TGG | 0.248241 | 8.4:-70526971 | MS.gene067323:CDS |
TTCACCGGATACCCTATAAT+TGG | 0.248554 | 8.4:-70515849 | MS.gene067323:CDS |
CTTGAAGAGATTGAACAAAT+TGG | 0.251791 | 8.4:-70515486 | MS.gene067323:CDS |
GGAGATCAAGTGGTGAGTTT+TGG | 0.264261 | 8.4:-70518986 | MS.gene067323:CDS |
CCATACCAATATGGTGTATA+TGG | 0.268864 | 8.4:+70526938 | None:intergenic |
CCATACCAATATGGTGTATA+TGG | 0.268864 | 8.4:+70530794 | None:intergenic |
TTCACACAGCGTACCAAAAT+TGG | 0.274218 | 8.4:-70527113 | MS.gene067323:CDS |
TTCACACAGCGTACCAAAAT+TGG | 0.274218 | 8.4:-70530969 | MS.gene067323:CDS |
GCTTACGGACTTACGAATAA+TGG | 0.286879 | 8.4:-70529753 | MS.gene067323:intron |
TTTGAAGAGATTGAGCAAAT+AGG | 0.288555 | 8.4:-70529259 | MS.gene067323:CDS |
GCTCTACATATAGTTCTATC+AGG | 0.293948 | 8.4:+70527232 | None:intergenic |
CGATTATGAAATCCAATTAT+AGG | 0.307683 | 8.4:+70515837 | None:intergenic |
TAATATCCCATTTGAATCTT+CGG | 0.310817 | 8.4:+70530940 | None:intergenic |
GCTTGGGACTCAAGAATAAA+AGG | 0.312743 | 8.4:-70515756 | MS.gene067323:CDS |
TCCACTTCCTTCATTTGCTT+TGG | 0.313940 | 8.4:-70529987 | MS.gene067323:CDS |
TGTGGAATTGACCAATATAT+TGG | 0.317450 | 8.4:-70529406 | MS.gene067323:CDS |
AATATCCCATTTGAATCTTC+GGG | 0.320158 | 8.4:+70530941 | None:intergenic |
GGAGATCAGGCAGTTGCATT+TGG | 0.320401 | 8.4:-70530133 | MS.gene067323:CDS |
CAAAGTCGTCTTCAGTCATC+TGG | 0.321275 | 8.4:-70529594 | MS.gene067323:CDS |
CTGGCTGCCATAAGAGTTAC+AGG | 0.328354 | 8.4:-70518821 | MS.gene067323:intron |
GCATTAGAATTCCAATATAT+TGG | 0.328803 | 8.4:+70529395 | None:intergenic |
CTTTACCATATACACCATAT+TGG | 0.340310 | 8.4:-70526943 | MS.gene067323:CDS |
CTTTACCATATACACCATAT+TGG | 0.340310 | 8.4:-70530799 | MS.gene067323:CDS |
TCAGTCATCTGGGTCATGTT+TGG | 0.341426 | 8.4:-70529583 | MS.gene067323:CDS |
ATTCTCTTCAAATCTGCATA+TGG | 0.343203 | 8.4:-70516002 | MS.gene067323:CDS |
TATTGGTATGGTTTAACAAT+AGG | 0.351486 | 8.4:-70526926 | MS.gene067323:CDS |
TATTGGTATGGTTTAACAAT+AGG | 0.351486 | 8.4:-70530782 | MS.gene067323:CDS |
TTCACCGGATACCCGGTTAT+CGG | 0.354217 | 8.4:-70529621 | MS.gene067323:CDS |
AATATAGAGGGTTGCCTCAT+TGG | 0.358005 | 8.4:-70529228 | MS.gene067323:CDS |
ATGACTATGTTGTGGAGATT+AGG | 0.358886 | 8.4:-70530700 | MS.gene067323:CDS |
TCAATTCCACATAGACCTTC+TGG | 0.359712 | 8.4:+70529418 | None:intergenic |
TTGAAGAGATTGAGCAAATA+GGG | 0.360805 | 8.4:-70529258 | MS.gene067323:CDS |
GCTCTACATATTGTTCTATC+AGG | 0.365801 | 8.4:+70531088 | None:intergenic |
ATATAGAGGGTTGCCTCATT+GGG | 0.369629 | 8.4:-70529227 | MS.gene067323:CDS |
TGTGAATTAGAACACTTGAT+TGG | 0.372350 | 8.4:+70531151 | None:intergenic |
TGTGAATTAGAACATTTGAT+TGG | 0.379341 | 8.4:+70527295 | None:intergenic |
AATAGGAATTTGGCATTTGA+AGG | 0.379762 | 8.4:-70529199 | MS.gene067323:CDS |
TCCTTCATTTGCTTTGGCAT+TGG | 0.386263 | 8.4:-70529981 | MS.gene067323:CDS |
AAGCTCACCTGTAACTCTTA+TGG | 0.386717 | 8.4:+70518814 | None:intergenic |
AGAACAAGAACTTGTTTCAA+TGG | 0.388631 | 8.4:-70531041 | MS.gene067323:CDS |
TGAAGCCTCAAAATATGGTT+TGG | 0.389002 | 8.4:-70526966 | MS.gene067323:CDS |
AACACTTGATTGGATCTTCT+GGG | 0.395625 | 8.4:+70531161 | None:intergenic |
ACAAGTTCTTGTTCTGAAGT+TGG | 0.397511 | 8.4:+70531049 | None:intergenic |
AGTATGGAGGGTTACCTCAT+TGG | 0.400674 | 8.4:-70515455 | MS.gene067323:CDS |
CCATTGCCAGATGTGTTTAT+GGG | 0.400920 | 8.4:+70518887 | None:intergenic |
TTAACAATAGGTGGAATGAT+TGG | 0.403173 | 8.4:-70530770 | MS.gene067323:CDS |
GATTATGAAATCCAATTATA+GGG | 0.406384 | 8.4:+70515838 | None:intergenic |
ACTAGTTCTTGTTCAGAAGT+TGG | 0.406569 | 8.4:+70527193 | None:intergenic |
TGAACAAGAACTAGTTTCAA+TGG | 0.409083 | 8.4:-70527185 | MS.gene067323:CDS |
CTACAAAAGTACCCTTTCCT+TGG | 0.411059 | 8.4:+70515219 | None:intergenic |
GAGATCAGGCAGTTGCATTT+GGG | 0.412330 | 8.4:-70530132 | MS.gene067323:CDS |
AATAGAAATGTGGCATTTGA+AGG | 0.414793 | 8.4:-70515426 | MS.gene067323:CDS |
GTATGGAGGGTTACCTCATT+GGG | 0.419078 | 8.4:-70515454 | MS.gene067323:CDS |
AAATCCGATAACCGGGTATC+CGG | 0.419142 | 8.4:+70529617 | None:intergenic |
ACGTGTAGCAACTTTGACTT+TGG | 0.419589 | 8.4:+70527138 | None:intergenic |
ACGTGTAGCAACTTTGACTT+TGG | 0.419589 | 8.4:+70530994 | None:intergenic |
TTGGCATTGGAAAGAACTAT+AGG | 0.423296 | 8.4:-70529968 | MS.gene067323:intron |
CGACTTTGAAATCCGATAAC+CGG | 0.424341 | 8.4:+70529609 | None:intergenic |
TGCACAATCACCAACTCATA+TGG | 0.427200 | 8.4:-70527262 | MS.gene067323:CDS |
TCCCACTCCTTCCATTGCAC+TGG | 0.433347 | 8.4:-70518840 | MS.gene067323:CDS |
AAAATCTTCAACCATGTTGA+AGG | 0.436225 | 8.4:-70531254 | None:intergenic |
ATGGAAGGAGTGGGACGAAA+GGG | 0.441145 | 8.4:+70518848 | None:intergenic |
TGCTCATGGAAGCACATTGT+GGG | 0.441637 | 8.4:-70530741 | MS.gene067323:CDS |
ACGGCTTCAAGTGCTTACTT+AGG | 0.453313 | 8.4:-70529364 | MS.gene067323:CDS |
TCAATTCCACATAACCCCTT+TGG | 0.454598 | 8.4:+70515645 | None:intergenic |
AGACCTTCAGATTATGAAGA+TGG | 0.459176 | 8.4:-70530671 | MS.gene067323:CDS |
TTCTCTTCAAATCTGCATAT+GGG | 0.459362 | 8.4:-70516001 | MS.gene067323:CDS |
CGGCTTCAAGTGCTTACTTA+GGG | 0.459582 | 8.4:-70529363 | MS.gene067323:CDS |
CTTTCCATCAGCATAACTAC+TGG | 0.459687 | 8.4:+70529818 | None:intergenic |
ATTGTTAAACCATACCAATA+TGG | 0.460970 | 8.4:+70526929 | None:intergenic |
ATTGTTAAACCATACCAATA+TGG | 0.460970 | 8.4:+70530785 | None:intergenic |
TGATTCGGATTTGGGAGATC+AGG | 0.462451 | 8.4:-70530146 | MS.gene067323:CDS |
GCAAAGATCCAATGGCTCCT+AGG | 0.463378 | 8.4:-70515524 | MS.gene067323:CDS |
AAATCCAATTATAGGGTATC+CGG | 0.463379 | 8.4:+70515845 | None:intergenic |
AGACCTTCGGATTCTGAAGA+TGG | 0.464622 | 8.4:-70526815 | MS.gene067323:CDS |
CGTGTTCCCATAAACACATC+TGG | 0.467324 | 8.4:-70518893 | MS.gene067323:CDS |
GATAAGGATCGTTAGACCTT+CGG | 0.471053 | 8.4:-70526828 | MS.gene067323:CDS |
CCATATACACCATATTGGTA+TGG | 0.475468 | 8.4:-70526938 | MS.gene067323:CDS |
CCATATACACCATATTGGTA+TGG | 0.475468 | 8.4:-70530794 | MS.gene067323:CDS |
GAATTCACTGGTAATGTTGA+TGG | 0.478089 | 8.4:-70516056 | MS.gene067323:CDS |
GGAAGCACATTGTGGGGAAA+AGG | 0.479799 | 8.4:-70526878 | MS.gene067323:CDS |
TAGATAGCTTTGTGTTGACT+TGG | 0.483878 | 8.4:+70518929 | None:intergenic |
GTGATGGATCGTTTAAACAT+AGG | 0.484043 | 8.4:+70530184 | None:intergenic |
TGCACAATCACCAACTCCTA+TGG | 0.484201 | 8.4:-70531118 | MS.gene067323:CDS |
GTAAAGATCCGATGACTCCT+AGG | 0.487812 | 8.4:-70529297 | MS.gene067323:CDS |
ACTCTCATAAAATTTGCTTA+CGG | 0.489562 | 8.4:-70529768 | MS.gene067323:CDS |
AAAGTATCACTTGGTGTGCT+TGG | 0.490568 | 8.4:-70526737 | MS.gene067323:CDS |
AAAGTATCACTTGGTGTGCT+TGG | 0.490568 | 8.4:-70530593 | MS.gene067323:CDS |
ACTTGGACGGATCAAATGCT+TGG | 0.496457 | 8.4:-70529097 | MS.gene067323:CDS |
ATAGGTGGAATGATCGGAAC+TGG | 0.496487 | 8.4:-70526908 | MS.gene067323:CDS |
CAAAGATAACAACATGTGCT+TGG | 0.497231 | 8.4:-70515773 | MS.gene067323:CDS |
CTAGTTCAACTAGTGCCAAA+GGG | 0.498588 | 8.4:-70515660 | MS.gene067323:CDS |
TGCTCATGGAAGCACATTGT+GGG | 0.500964 | 8.4:-70526885 | MS.gene067323:CDS |
ATGACTATGTTGTGGAGATA+AGG | 0.501245 | 8.4:-70526844 | MS.gene067323:CDS |
CAAAGATCCAATGGCTCCTA+GGG | 0.502388 | 8.4:-70515523 | MS.gene067323:CDS |
GTATGTCCCGAAGATTCAAA+TGG | 0.503670 | 8.4:-70530947 | MS.gene067323:CDS |
GTATGTCCAGAAGATTCAAA+TGG | 0.506120 | 8.4:-70527091 | MS.gene067323:CDS |
GCATATGGGCTTACGAATAA+CGG | 0.507659 | 8.4:-70515987 | MS.gene067323:intron |
TTCATTGCAATCCAAGGAAA+GGG | 0.513321 | 8.4:-70515230 | MS.gene067323:CDS |
TCATAAACCCTAGGAGCCAT+TGG | 0.514872 | 8.4:+70515516 | None:intergenic |
TGTGCTTGGTGTTATTTCAC+AGG | 0.517194 | 8.4:-70526723 | MS.gene067323:intron |
TGTGCTTGGTGTTATTTCAC+AGG | 0.517194 | 8.4:-70530579 | MS.gene067323:intron |
ACGGCTTCAAGTGCTTACTT+AGG | 0.518485 | 8.4:-70515591 | MS.gene067323:CDS |
CTAGTGCCAAAGGGGTTATG+TGG | 0.518507 | 8.4:-70515651 | MS.gene067323:CDS |
AATGAAGGAAGTGGACGAAA+AGG | 0.518736 | 8.4:+70529995 | None:intergenic |
TGGTATGGTTTAACAATAGG+TGG | 0.522598 | 8.4:-70526923 | MS.gene067323:CDS |
TGGTATGGTTTAACAATAGG+TGG | 0.522598 | 8.4:-70530779 | MS.gene067323:CDS |
GTAATGGATCGCTTGAACAT+GGG | 0.523068 | 8.4:+70519037 | None:intergenic |
AAAGATAACAACATGTGCTT+GGG | 0.530045 | 8.4:-70515772 | MS.gene067323:CDS |
AAATCTTCAACCATGTTGAA+GGG | 0.532978 | 8.4:-70531253 | None:intergenic |
CAAAGTCTAATGCATCCTCT+TGG | 0.533319 | 8.4:+70515565 | None:intergenic |
CAAGTGCTTGGAATAAAAGA+AGG | 0.533447 | 8.4:-70515312 | MS.gene067323:CDS |
CAAATGCTTGGATTAAAAGA+AGG | 0.533447 | 8.4:-70529085 | MS.gene067323:CDS |
ACATGGACGGATCAAGTGCT+TGG | 0.535057 | 8.4:-70515324 | MS.gene067323:CDS |
TCCAATGCCAAAGCAAATGA+AGG | 0.535087 | 8.4:+70529980 | None:intergenic |
TGTAATGGATCGCTTGAACA+TGG | 0.535640 | 8.4:+70519036 | None:intergenic |
GCCAAAGCAAATGAAGGAAG+TGG | 0.536020 | 8.4:+70529986 | None:intergenic |
TATATAGCTTTGTGTTGACT+CGG | 0.538098 | 8.4:+70530076 | None:intergenic |
GTGCTCATGGAAGCACATTG+TGG | 0.539693 | 8.4:-70530742 | MS.gene067323:CDS |
AGCCAGTGCAATGGAAGGAG+TGG | 0.541636 | 8.4:+70518838 | None:intergenic |
AAGATATTCATTGCAATCCA+AGG | 0.541954 | 8.4:-70515236 | MS.gene067323:CDS |
ATGATTGGAACTGGTGCTCA+TGG | 0.542136 | 8.4:-70530755 | MS.gene067323:CDS |
CAAGCGATCCATTACATATG+TGG | 0.543977 | 8.4:-70519029 | MS.gene067323:CDS |
AATGGAAGGAGTGGGACGAA+AGG | 0.544229 | 8.4:+70518847 | None:intergenic |
GTGGAATTGAGCAATACAAT+GGG | 0.544599 | 8.4:-70515632 | MS.gene067323:CDS |
ATTCATTGCAATCCAAGGAA+AGG | 0.547480 | 8.4:-70515231 | MS.gene067323:CDS |
ATAGGTGGAATGATTGGAAC+TGG | 0.547534 | 8.4:-70530764 | MS.gene067323:CDS |
AGATAGCTTTGTGTTGACTT+GGG | 0.549387 | 8.4:+70518930 | None:intergenic |
GGAAGAGAAAACAATAACAT+TGG | 0.549525 | 8.4:-70530876 | MS.gene067323:CDS |
AATTCTAATGCGTTATGTCA+CGG | 0.551733 | 8.4:-70529383 | MS.gene067323:CDS |
AGGAAACATTCCATAGGAGT+TGG | 0.556199 | 8.4:+70531108 | None:intergenic |
ATGATCGGAACTGGTGCTCA+TGG | 0.556298 | 8.4:-70526899 | MS.gene067323:CDS |
TAGACCGGGCAAAATTTACA+AGG | 0.556346 | 8.4:-70515199 | MS.gene067323:CDS |
GCTAGTTCAACTAGTGCCAA+AGG | 0.560896 | 8.4:-70515661 | MS.gene067323:CDS |
CTTGTAGGTATAATCTTCAC+CGG | 0.563511 | 8.4:-70515864 | MS.gene067323:intron |
GAATCCAGTAGTTATGCTGA+TGG | 0.563591 | 8.4:-70529822 | MS.gene067323:CDS |
AGAATATCTTCATAAACCCT+AGG | 0.565816 | 8.4:+70515507 | None:intergenic |
GAGGATCTTGATGAATTCAC+TGG | 0.566382 | 8.4:-70516068 | MS.gene067323:CDS |
GATTCTAATGCGTTATGTCA+CGG | 0.567564 | 8.4:-70515610 | MS.gene067323:CDS |
TATGTCCCGAAGATTCAAAT+GGG | 0.569596 | 8.4:-70530946 | MS.gene067323:CDS |
GCCAGTGCAATGGAAGGAGT+GGG | 0.572301 | 8.4:+70518839 | None:intergenic |
TATGTCCAGAAGATTCAAAT+GGG | 0.573247 | 8.4:-70527090 | MS.gene067323:CDS |
AGGGAACATTCCATATGAGT+TGG | 0.574379 | 8.4:+70527252 | None:intergenic |
TCATAAAGCCTAGGAGTCAT+CGG | 0.576297 | 8.4:+70529289 | None:intergenic |
ATATAGCTTTGTGTTGACTC+GGG | 0.576413 | 8.4:+70530077 | None:intergenic |
CCCATAAACACATCTGGCAA+TGG | 0.577105 | 8.4:-70518887 | MS.gene067323:CDS |
AAAACGTCTTCATAAAGCCT+AGG | 0.577155 | 8.4:+70529280 | None:intergenic |
TTCTGTTCATGACTATGTTG+TGG | 0.577795 | 8.4:-70530708 | MS.gene067323:CDS |
AATGCAGCTAAAGTATCACT+TGG | 0.578730 | 8.4:-70526746 | MS.gene067323:CDS |
AATGCAGCTAAAGTATCACT+TGG | 0.578730 | 8.4:-70530602 | MS.gene067323:CDS |
TTCAGATTTGGGAGATCAAG+TGG | 0.578792 | 8.4:-70518996 | MS.gene067323:CDS |
TATAATCTTCACCGGATACC+CGG | 0.581512 | 8.4:-70529628 | MS.gene067323:CDS |
GAGCCATTGGATCTTTGCTA+CGG | 0.582368 | 8.4:+70515529 | None:intergenic |
TGTGTAGGTATAATCTTCAC+CGG | 0.583295 | 8.4:-70529636 | MS.gene067323:intron |
CGTGTCCACGAAAATACACC+AGG | 0.585940 | 8.4:-70530040 | MS.gene067323:CDS |
AAATCGTATAGACCATCGCC+TGG | 0.586529 | 8.4:+70530022 | None:intergenic |
CACTTGATTGGATCTTCTGG+GGG | 0.588121 | 8.4:+70531163 | None:intergenic |
TTTCTATTCTTACCCCAATG+AGG | 0.589593 | 8.4:+70515441 | None:intergenic |
TATCCATCTTCATAATCTGA+AGG | 0.592184 | 8.4:+70530668 | None:intergenic |
TGGAAGGAGTGGGACGAAAG+GGG | 0.592595 | 8.4:+70518849 | None:intergenic |
TTAACAATAGGTGGAATGAT+CGG | 0.595792 | 8.4:-70526914 | MS.gene067323:CDS |
TGCTGTTCATGACTATGTTG+TGG | 0.597583 | 8.4:-70526852 | MS.gene067323:CDS |
ACACTTGATTGGATCTTCTG+GGG | 0.598425 | 8.4:+70531162 | None:intergenic |
AAAGTCGTCTTCAGTCATCT+GGG | 0.602499 | 8.4:-70529593 | MS.gene067323:CDS |
TCTTATGGCAGCCAGTGCAA+TGG | 0.603219 | 8.4:+70518829 | None:intergenic |
TTGTGAGAAACCCTTCAACA+TGG | 0.604503 | 8.4:+70531243 | None:intergenic |
AGATAAACTAACTCTAAATG+TGG | 0.605438 | 8.4:+70515716 | None:intergenic |
GTGCTCATGGAAGCACATTG+TGG | 0.605590 | 8.4:-70526886 | MS.gene067323:CDS |
CTCTACATATAGTTCTATCA+GGG | 0.611082 | 8.4:+70527233 | None:intergenic |
TGTGGAATTGAGCAATACAA+TGG | 0.611294 | 8.4:-70515633 | MS.gene067323:CDS |
ATAGAGCCAGAAGGTCTATG+TGG | 0.614817 | 8.4:-70529424 | MS.gene067323:CDS |
TATAGAGGGTTGCCTCATTG+GGG | 0.616951 | 8.4:-70529226 | MS.gene067323:CDS |
TTACCGTAGCAAAGATCCAA+TGG | 0.619712 | 8.4:-70515532 | MS.gene067323:CDS |
GAGTCATCGGATCTTTACTA+CGG | 0.623579 | 8.4:+70529302 | None:intergenic |
TCTATCAGGAAACATTCCAT+AGG | 0.624377 | 8.4:+70531102 | None:intergenic |
ATGGCAGCCAGTGCAATGGA+AGG | 0.624939 | 8.4:+70518833 | None:intergenic |
GACTTTGAAATCCGATAACC+GGG | 0.628203 | 8.4:+70529610 | None:intergenic |
CACGAAAATACACCAGGCGA+TGG | 0.631463 | 8.4:-70530034 | MS.gene067323:CDS |
AAAACAATAGCATTGGAGAG+TGG | 0.640669 | 8.4:-70527013 | MS.gene067323:CDS |
TTAGTTCAAATAGAGCCAGA+AGG | 0.643461 | 8.4:-70529433 | MS.gene067323:CDS |
GCTCATGGAAGCACATTGTG+GGG | 0.650279 | 8.4:-70530740 | MS.gene067323:CDS |
AAAACAATAACATTGGAGAG+TGG | 0.652668 | 8.4:-70530869 | MS.gene067323:CDS |
TTGGGGTAAGAATAGAAATG+TGG | 0.660182 | 8.4:-70515436 | MS.gene067323:CDS |
AAAGAGAAATATGATTCACA+AGG | 0.660324 | 8.4:-70529133 | MS.gene067323:CDS |
ATGAGTTTGCAGACATAACG+TGG | 0.663531 | 8.4:-70530102 | MS.gene067323:CDS |
CTCATGGAAGCACATTGTGG+GGG | 0.664423 | 8.4:-70530739 | MS.gene067323:CDS |
TGTAGATAGTACAATAACAG+AGG | 0.668513 | 8.4:+70531186 | None:intergenic |
GATGTTATATGTAAATCTTG+AGG | 0.669322 | 8.4:+70529555 | None:intergenic |
AAGAGAAATATGATTCACAA+GGG | 0.671054 | 8.4:-70529132 | MS.gene067323:CDS |
TATGCTGATGGAAAGTGCAT+AGG | 0.671267 | 8.4:-70529810 | MS.gene067323:CDS |
ATAGAGGGTTGCCTCATTGG+GGG | 0.672617 | 8.4:-70529225 | MS.gene067323:CDS |
ATGAGTTTGCAGATATATCG+TGG | 0.673607 | 8.4:-70518955 | MS.gene067323:CDS |
TATCCATCTTCAGAATCCGA+AGG | 0.677169 | 8.4:+70526812 | None:intergenic |
TAGTTCAACTAGTGCCAAAG+GGG | 0.680746 | 8.4:-70515659 | MS.gene067323:CDS |
TATGGAGGGTTACCTCATTG+GGG | 0.706301 | 8.4:-70515453 | MS.gene067323:CDS |
TGCTTACTTAGGAAACCAAG+AGG | 0.708136 | 8.4:-70515580 | MS.gene067323:CDS |
AAAGAGAAATATGATTCACA+AGG | 0.709239 | 8.4:-70515360 | MS.gene067323:CDS |
ACCGGGCAAAATTTACAAGG+AGG | 0.716664 | 8.4:-70515196 | MS.gene067323:CDS |
AAGCACGAAATATCTCAACA+AGG | 0.722713 | 8.4:-70527059 | MS.gene067323:CDS |
AAGCACAAAATATCTCAACA+AGG | 0.725245 | 8.4:-70530915 | MS.gene067323:CDS |
GCTCATGGAAGCACATTGTG+GGG | 0.736799 | 8.4:-70526884 | MS.gene067323:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.4 | gene | 70515173 | 70531263 | 70515173 | ID=MS.gene067323 |
chr8.4 | mRNA | 70515173 | 70531263 | 70515173 | ID=MS.gene067323.t1;Parent=MS.gene067323 |
chr8.4 | exon | 70530580 | 70531263 | 70530580 | ID=MS.gene067323.t1.exon1;Parent=MS.gene067323.t1 |
chr8.4 | CDS | 70530580 | 70531263 | 70530580 | ID=cds.MS.gene067323.t1;Parent=MS.gene067323.t1 |
chr8.4 | exon | 70529969 | 70530224 | 70529969 | ID=MS.gene067323.t1.exon2;Parent=MS.gene067323.t1 |
chr8.4 | CDS | 70529969 | 70530224 | 70529969 | ID=cds.MS.gene067323.t1;Parent=MS.gene067323.t1 |
chr8.4 | exon | 70529754 | 70529855 | 70529754 | ID=MS.gene067323.t1.exon3;Parent=MS.gene067323.t1 |
chr8.4 | CDS | 70529754 | 70529855 | 70529754 | ID=cds.MS.gene067323.t1;Parent=MS.gene067323.t1 |
chr8.4 | exon | 70529553 | 70529651 | 70529553 | ID=MS.gene067323.t1.exon4;Parent=MS.gene067323.t1 |
chr8.4 | CDS | 70529553 | 70529651 | 70529553 | ID=cds.MS.gene067323.t1;Parent=MS.gene067323.t1 |
chr8.4 | exon | 70529050 | 70529466 | 70529050 | ID=MS.gene067323.t1.exon5;Parent=MS.gene067323.t1 |
chr8.4 | CDS | 70529050 | 70529466 | 70529050 | ID=cds.MS.gene067323.t1;Parent=MS.gene067323.t1 |
chr8.4 | exon | 70526724 | 70527322 | 70526724 | ID=MS.gene067323.t1.exon6;Parent=MS.gene067323.t1 |
chr8.4 | CDS | 70526724 | 70527322 | 70526724 | ID=cds.MS.gene067323.t1;Parent=MS.gene067323.t1 |
chr8.4 | exon | 70518822 | 70519077 | 70518822 | ID=MS.gene067323.t1.exon7;Parent=MS.gene067323.t1 |
chr8.4 | CDS | 70518822 | 70519077 | 70518822 | ID=cds.MS.gene067323.t1;Parent=MS.gene067323.t1 |
chr8.4 | exon | 70515988 | 70516089 | 70515988 | ID=MS.gene067323.t1.exon8;Parent=MS.gene067323.t1 |
chr8.4 | CDS | 70515988 | 70516089 | 70515988 | ID=cds.MS.gene067323.t1;Parent=MS.gene067323.t1 |
chr8.4 | exon | 70515173 | 70515879 | 70515173 | ID=MS.gene067323.t1.exon9;Parent=MS.gene067323.t1 |
chr8.4 | CDS | 70515173 | 70515879 | 70515173 | ID=cds.MS.gene067323.t1;Parent=MS.gene067323.t1 |
Gene Sequence |
Protein sequence |