Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067323.t1 | RXI07638.1 | 61.9 | 1121 | 314 | 7 | 13 | 1068 | 18 | 1090 | 0.00E+00 | 1408.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067323.t1 | O81032 | 65.7 | 554 | 188 | 2 | 520 | 1072 | 39 | 591 | 4.4e-224 | 779.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067323.t1 | A0A498KIW4 | 61.9 | 1121 | 314 | 7 | 13 | 1068 | 18 | 1090 | 0.0e+00 | 1408.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene060494 | MS.gene067323 | 0.800287 | 1.55E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067323.t1 | MTR_8g024560 | 96.751 | 554 | 18 | 0 | 520 | 1073 | 29 | 582 | 0.0 | 1119 |
| MS.gene067323.t1 | MTR_8g024560 | 76.672 | 583 | 97 | 3 | 1 | 554 | 1 | 573 | 0.0 | 894 |
| MS.gene067323.t1 | MTR_5g005540 | 67.514 | 551 | 175 | 4 | 521 | 1070 | 27 | 574 | 0.0 | 771 |
| MS.gene067323.t1 | MTR_5g005540 | 59.162 | 573 | 193 | 8 | 12 | 549 | 9 | 575 | 0.0 | 661 |
| MS.gene067323.t1 | MTR_1g026710 | 50.893 | 448 | 215 | 3 | 623 | 1070 | 56 | 498 | 1.25e-154 | 469 |
| MS.gene067323.t1 | MTR_1g026710 | 43.975 | 473 | 224 | 8 | 119 | 558 | 45 | 509 | 4.82e-119 | 376 |
| MS.gene067323.t1 | MTR_7g118100 | 75.556 | 135 | 33 | 0 | 938 | 1072 | 18 | 152 | 4.25e-64 | 214 |
| MS.gene067323.t1 | MTR_7g118100 | 64.964 | 137 | 40 | 2 | 418 | 549 | 18 | 151 | 1.79e-46 | 164 |
| MS.gene067323.t1 | MTR_1g026680 | 41.636 | 269 | 125 | 2 | 720 | 988 | 58 | 294 | 4.83e-60 | 208 |
| MS.gene067323.t1 | MTR_1g026680 | 35.811 | 296 | 131 | 4 | 200 | 468 | 31 | 294 | 2.58e-43 | 160 |
| MS.gene067323.t1 | MTR_7g118095 | 60.544 | 147 | 53 | 3 | 1 | 143 | 1 | 146 | 3.75e-50 | 174 |
| MS.gene067323.t1 | MTR_7g118095 | 65.812 | 117 | 37 | 2 | 520 | 634 | 31 | 146 | 6.44e-45 | 159 |
| MS.gene067323.t1 | MTR_8g024550 | 95.833 | 48 | 2 | 0 | 421 | 468 | 3 | 50 | 9.16e-28 | 107 |
| MS.gene067323.t1 | MTR_8g024550 | 75.926 | 54 | 13 | 0 | 941 | 994 | 3 | 56 | 7.36e-26 | 101 |
| MS.gene067323.t1 | MTR_6g033475 | 53.465 | 101 | 31 | 2 | 367 | 451 | 86 | 186 | 2.01e-25 | 105 |
| MS.gene067323.t1 | MTR_6g033475 | 70.423 | 71 | 20 | 1 | 902 | 971 | 116 | 186 | 3.99e-24 | 101 |
| MS.gene067323.t1 | MTR_1g051520 | 46.341 | 82 | 43 | 1 | 380 | 461 | 17 | 97 | 2.24e-17 | 79.0 |
| MS.gene067323.t1 | MTR_1g051520 | 42.222 | 90 | 51 | 1 | 892 | 981 | 9 | 97 | 8.59e-17 | 77.4 |
| MS.gene067323.t1 | MTR_1g050360 | 25.862 | 174 | 106 | 5 | 556 | 723 | 122 | 278 | 7.88e-11 | 66.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067323.t1 | AT2G46760 | 65.704 | 554 | 188 | 2 | 520 | 1072 | 39 | 591 | 0.0 | 800 |
| MS.gene067323.t1 | AT2G46760 | 57.343 | 572 | 200 | 7 | 13 | 554 | 26 | 583 | 0.0 | 665 |
| MS.gene067323.t1 | AT2G46750 | 63.604 | 555 | 200 | 2 | 520 | 1073 | 31 | 584 | 0.0 | 775 |
| MS.gene067323.t1 | AT2G46750 | 54.577 | 579 | 222 | 5 | 6 | 554 | 8 | 575 | 0.0 | 646 |
| MS.gene067323.t1 | AT5G56490 | 63.849 | 556 | 198 | 3 | 520 | 1073 | 21 | 575 | 0.0 | 763 |
| MS.gene067323.t1 | AT5G56490 | 55.382 | 576 | 213 | 8 | 10 | 554 | 4 | 566 | 0.0 | 633 |
| MS.gene067323.t1 | AT1G32300 | 62.590 | 556 | 205 | 3 | 520 | 1073 | 22 | 576 | 0.0 | 759 |
| MS.gene067323.t1 | AT1G32300 | 54.561 | 592 | 223 | 8 | 10 | 570 | 4 | 580 | 0.0 | 627 |
| MS.gene067323.t1 | AT2G46740 | 61.622 | 555 | 211 | 2 | 520 | 1073 | 35 | 588 | 0.0 | 756 |
| MS.gene067323.t1 | AT2G46740 | 54.073 | 577 | 224 | 6 | 8 | 554 | 14 | 579 | 0.0 | 637 |
| MS.gene067323.t1 | AT5G11540 | 45.390 | 564 | 301 | 4 | 509 | 1070 | 17 | 575 | 7.22e-166 | 501 |
| MS.gene067323.t1 | AT5G11540 | 41.509 | 583 | 294 | 9 | 5 | 551 | 7 | 578 | 6.44e-133 | 415 |
| MS.gene067323.t1 | AT5G56470 | 61.789 | 246 | 93 | 1 | 829 | 1073 | 5 | 250 | 9.46e-107 | 334 |
| MS.gene067323.t1 | AT5G56470 | 48.400 | 250 | 86 | 5 | 349 | 568 | 16 | 252 | 1.23e-65 | 222 |
| MS.gene067323.t1 | AT3G47930 | 25.862 | 174 | 106 | 5 | 556 | 723 | 129 | 285 | 1.83e-11 | 68.6 |
| MS.gene067323.t1 | AT3G47930 | 25.862 | 174 | 106 | 5 | 556 | 723 | 129 | 285 | 2.07e-11 | 68.6 |
Find 208 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTTCTGGACATACCAATTT+TGG | 0.164055 | 8.4:+70527100 | None:intergenic |
| TCTTCGGGACATACCAATTT+TGG | 0.168977 | 8.4:+70530956 | None:intergenic |
| CATAATCGTCTTCAATCTTC+TGG | 0.188911 | 8.4:-70515822 | MS.gene067323:CDS |
| ACCATTGCCAGATGTGTTTA+TGG | 0.199281 | 8.4:+70518886 | None:intergenic |
| TTTGTAGGTTACTCTAAATT+TGG | 0.208620 | 8.4:-70530209 | MS.gene067323:intron |
| AATATCCCATTTGAATCTTC+TGG | 0.225555 | 8.4:+70527085 | None:intergenic |
| GAACACTTGATTGGATCTTC+TGG | 0.229468 | 8.4:+70531160 | None:intergenic |
| ATTAATGAAGCCTCAAAATA+TGG | 0.248241 | 8.4:-70526971 | MS.gene067323:CDS |
| TTCACCGGATACCCTATAAT+TGG | 0.248554 | 8.4:-70515849 | MS.gene067323:CDS |
| CTTGAAGAGATTGAACAAAT+TGG | 0.251791 | 8.4:-70515486 | MS.gene067323:CDS |
| GGAGATCAAGTGGTGAGTTT+TGG | 0.264261 | 8.4:-70518986 | MS.gene067323:CDS |
| CCATACCAATATGGTGTATA+TGG | 0.268864 | 8.4:+70526938 | None:intergenic |
| CCATACCAATATGGTGTATA+TGG | 0.268864 | 8.4:+70530794 | None:intergenic |
| TTCACACAGCGTACCAAAAT+TGG | 0.274218 | 8.4:-70527113 | MS.gene067323:CDS |
| TTCACACAGCGTACCAAAAT+TGG | 0.274218 | 8.4:-70530969 | MS.gene067323:CDS |
| GCTTACGGACTTACGAATAA+TGG | 0.286879 | 8.4:-70529753 | MS.gene067323:intron |
| TTTGAAGAGATTGAGCAAAT+AGG | 0.288555 | 8.4:-70529259 | MS.gene067323:CDS |
| GCTCTACATATAGTTCTATC+AGG | 0.293948 | 8.4:+70527232 | None:intergenic |
| CGATTATGAAATCCAATTAT+AGG | 0.307683 | 8.4:+70515837 | None:intergenic |
| TAATATCCCATTTGAATCTT+CGG | 0.310817 | 8.4:+70530940 | None:intergenic |
| GCTTGGGACTCAAGAATAAA+AGG | 0.312743 | 8.4:-70515756 | MS.gene067323:CDS |
| TCCACTTCCTTCATTTGCTT+TGG | 0.313940 | 8.4:-70529987 | MS.gene067323:CDS |
| TGTGGAATTGACCAATATAT+TGG | 0.317450 | 8.4:-70529406 | MS.gene067323:CDS |
| AATATCCCATTTGAATCTTC+GGG | 0.320158 | 8.4:+70530941 | None:intergenic |
| GGAGATCAGGCAGTTGCATT+TGG | 0.320401 | 8.4:-70530133 | MS.gene067323:CDS |
| CAAAGTCGTCTTCAGTCATC+TGG | 0.321275 | 8.4:-70529594 | MS.gene067323:CDS |
| CTGGCTGCCATAAGAGTTAC+AGG | 0.328354 | 8.4:-70518821 | MS.gene067323:intron |
| GCATTAGAATTCCAATATAT+TGG | 0.328803 | 8.4:+70529395 | None:intergenic |
| CTTTACCATATACACCATAT+TGG | 0.340310 | 8.4:-70526943 | MS.gene067323:CDS |
| CTTTACCATATACACCATAT+TGG | 0.340310 | 8.4:-70530799 | MS.gene067323:CDS |
| TCAGTCATCTGGGTCATGTT+TGG | 0.341426 | 8.4:-70529583 | MS.gene067323:CDS |
| ATTCTCTTCAAATCTGCATA+TGG | 0.343203 | 8.4:-70516002 | MS.gene067323:CDS |
| TATTGGTATGGTTTAACAAT+AGG | 0.351486 | 8.4:-70526926 | MS.gene067323:CDS |
| TATTGGTATGGTTTAACAAT+AGG | 0.351486 | 8.4:-70530782 | MS.gene067323:CDS |
| TTCACCGGATACCCGGTTAT+CGG | 0.354217 | 8.4:-70529621 | MS.gene067323:CDS |
| AATATAGAGGGTTGCCTCAT+TGG | 0.358005 | 8.4:-70529228 | MS.gene067323:CDS |
| ATGACTATGTTGTGGAGATT+AGG | 0.358886 | 8.4:-70530700 | MS.gene067323:CDS |
| TCAATTCCACATAGACCTTC+TGG | 0.359712 | 8.4:+70529418 | None:intergenic |
| TTGAAGAGATTGAGCAAATA+GGG | 0.360805 | 8.4:-70529258 | MS.gene067323:CDS |
| GCTCTACATATTGTTCTATC+AGG | 0.365801 | 8.4:+70531088 | None:intergenic |
| ATATAGAGGGTTGCCTCATT+GGG | 0.369629 | 8.4:-70529227 | MS.gene067323:CDS |
| TGTGAATTAGAACACTTGAT+TGG | 0.372350 | 8.4:+70531151 | None:intergenic |
| TGTGAATTAGAACATTTGAT+TGG | 0.379341 | 8.4:+70527295 | None:intergenic |
| AATAGGAATTTGGCATTTGA+AGG | 0.379762 | 8.4:-70529199 | MS.gene067323:CDS |
| TCCTTCATTTGCTTTGGCAT+TGG | 0.386263 | 8.4:-70529981 | MS.gene067323:CDS |
| AAGCTCACCTGTAACTCTTA+TGG | 0.386717 | 8.4:+70518814 | None:intergenic |
| AGAACAAGAACTTGTTTCAA+TGG | 0.388631 | 8.4:-70531041 | MS.gene067323:CDS |
| TGAAGCCTCAAAATATGGTT+TGG | 0.389002 | 8.4:-70526966 | MS.gene067323:CDS |
| AACACTTGATTGGATCTTCT+GGG | 0.395625 | 8.4:+70531161 | None:intergenic |
| ACAAGTTCTTGTTCTGAAGT+TGG | 0.397511 | 8.4:+70531049 | None:intergenic |
| AGTATGGAGGGTTACCTCAT+TGG | 0.400674 | 8.4:-70515455 | MS.gene067323:CDS |
| CCATTGCCAGATGTGTTTAT+GGG | 0.400920 | 8.4:+70518887 | None:intergenic |
| TTAACAATAGGTGGAATGAT+TGG | 0.403173 | 8.4:-70530770 | MS.gene067323:CDS |
| GATTATGAAATCCAATTATA+GGG | 0.406384 | 8.4:+70515838 | None:intergenic |
| ACTAGTTCTTGTTCAGAAGT+TGG | 0.406569 | 8.4:+70527193 | None:intergenic |
| TGAACAAGAACTAGTTTCAA+TGG | 0.409083 | 8.4:-70527185 | MS.gene067323:CDS |
| CTACAAAAGTACCCTTTCCT+TGG | 0.411059 | 8.4:+70515219 | None:intergenic |
| GAGATCAGGCAGTTGCATTT+GGG | 0.412330 | 8.4:-70530132 | MS.gene067323:CDS |
| AATAGAAATGTGGCATTTGA+AGG | 0.414793 | 8.4:-70515426 | MS.gene067323:CDS |
| GTATGGAGGGTTACCTCATT+GGG | 0.419078 | 8.4:-70515454 | MS.gene067323:CDS |
| AAATCCGATAACCGGGTATC+CGG | 0.419142 | 8.4:+70529617 | None:intergenic |
| ACGTGTAGCAACTTTGACTT+TGG | 0.419589 | 8.4:+70527138 | None:intergenic |
| ACGTGTAGCAACTTTGACTT+TGG | 0.419589 | 8.4:+70530994 | None:intergenic |
| TTGGCATTGGAAAGAACTAT+AGG | 0.423296 | 8.4:-70529968 | MS.gene067323:intron |
| CGACTTTGAAATCCGATAAC+CGG | 0.424341 | 8.4:+70529609 | None:intergenic |
| TGCACAATCACCAACTCATA+TGG | 0.427200 | 8.4:-70527262 | MS.gene067323:CDS |
| TCCCACTCCTTCCATTGCAC+TGG | 0.433347 | 8.4:-70518840 | MS.gene067323:CDS |
| AAAATCTTCAACCATGTTGA+AGG | 0.436225 | 8.4:-70531254 | None:intergenic |
| ATGGAAGGAGTGGGACGAAA+GGG | 0.441145 | 8.4:+70518848 | None:intergenic |
| TGCTCATGGAAGCACATTGT+GGG | 0.441637 | 8.4:-70530741 | MS.gene067323:CDS |
| ACGGCTTCAAGTGCTTACTT+AGG | 0.453313 | 8.4:-70529364 | MS.gene067323:CDS |
| TCAATTCCACATAACCCCTT+TGG | 0.454598 | 8.4:+70515645 | None:intergenic |
| AGACCTTCAGATTATGAAGA+TGG | 0.459176 | 8.4:-70530671 | MS.gene067323:CDS |
| TTCTCTTCAAATCTGCATAT+GGG | 0.459362 | 8.4:-70516001 | MS.gene067323:CDS |
| CGGCTTCAAGTGCTTACTTA+GGG | 0.459582 | 8.4:-70529363 | MS.gene067323:CDS |
| CTTTCCATCAGCATAACTAC+TGG | 0.459687 | 8.4:+70529818 | None:intergenic |
| ATTGTTAAACCATACCAATA+TGG | 0.460970 | 8.4:+70526929 | None:intergenic |
| ATTGTTAAACCATACCAATA+TGG | 0.460970 | 8.4:+70530785 | None:intergenic |
| TGATTCGGATTTGGGAGATC+AGG | 0.462451 | 8.4:-70530146 | MS.gene067323:CDS |
| GCAAAGATCCAATGGCTCCT+AGG | 0.463378 | 8.4:-70515524 | MS.gene067323:CDS |
| AAATCCAATTATAGGGTATC+CGG | 0.463379 | 8.4:+70515845 | None:intergenic |
| AGACCTTCGGATTCTGAAGA+TGG | 0.464622 | 8.4:-70526815 | MS.gene067323:CDS |
| CGTGTTCCCATAAACACATC+TGG | 0.467324 | 8.4:-70518893 | MS.gene067323:CDS |
| GATAAGGATCGTTAGACCTT+CGG | 0.471053 | 8.4:-70526828 | MS.gene067323:CDS |
| CCATATACACCATATTGGTA+TGG | 0.475468 | 8.4:-70526938 | MS.gene067323:CDS |
| CCATATACACCATATTGGTA+TGG | 0.475468 | 8.4:-70530794 | MS.gene067323:CDS |
| GAATTCACTGGTAATGTTGA+TGG | 0.478089 | 8.4:-70516056 | MS.gene067323:CDS |
| GGAAGCACATTGTGGGGAAA+AGG | 0.479799 | 8.4:-70526878 | MS.gene067323:CDS |
| TAGATAGCTTTGTGTTGACT+TGG | 0.483878 | 8.4:+70518929 | None:intergenic |
| GTGATGGATCGTTTAAACAT+AGG | 0.484043 | 8.4:+70530184 | None:intergenic |
| TGCACAATCACCAACTCCTA+TGG | 0.484201 | 8.4:-70531118 | MS.gene067323:CDS |
| GTAAAGATCCGATGACTCCT+AGG | 0.487812 | 8.4:-70529297 | MS.gene067323:CDS |
| ACTCTCATAAAATTTGCTTA+CGG | 0.489562 | 8.4:-70529768 | MS.gene067323:CDS |
| AAAGTATCACTTGGTGTGCT+TGG | 0.490568 | 8.4:-70526737 | MS.gene067323:CDS |
| AAAGTATCACTTGGTGTGCT+TGG | 0.490568 | 8.4:-70530593 | MS.gene067323:CDS |
| ACTTGGACGGATCAAATGCT+TGG | 0.496457 | 8.4:-70529097 | MS.gene067323:CDS |
| ATAGGTGGAATGATCGGAAC+TGG | 0.496487 | 8.4:-70526908 | MS.gene067323:CDS |
| CAAAGATAACAACATGTGCT+TGG | 0.497231 | 8.4:-70515773 | MS.gene067323:CDS |
| CTAGTTCAACTAGTGCCAAA+GGG | 0.498588 | 8.4:-70515660 | MS.gene067323:CDS |
| TGCTCATGGAAGCACATTGT+GGG | 0.500964 | 8.4:-70526885 | MS.gene067323:CDS |
| ATGACTATGTTGTGGAGATA+AGG | 0.501245 | 8.4:-70526844 | MS.gene067323:CDS |
| CAAAGATCCAATGGCTCCTA+GGG | 0.502388 | 8.4:-70515523 | MS.gene067323:CDS |
| GTATGTCCCGAAGATTCAAA+TGG | 0.503670 | 8.4:-70530947 | MS.gene067323:CDS |
| GTATGTCCAGAAGATTCAAA+TGG | 0.506120 | 8.4:-70527091 | MS.gene067323:CDS |
| GCATATGGGCTTACGAATAA+CGG | 0.507659 | 8.4:-70515987 | MS.gene067323:intron |
| TTCATTGCAATCCAAGGAAA+GGG | 0.513321 | 8.4:-70515230 | MS.gene067323:CDS |
| TCATAAACCCTAGGAGCCAT+TGG | 0.514872 | 8.4:+70515516 | None:intergenic |
| TGTGCTTGGTGTTATTTCAC+AGG | 0.517194 | 8.4:-70526723 | MS.gene067323:intron |
| TGTGCTTGGTGTTATTTCAC+AGG | 0.517194 | 8.4:-70530579 | MS.gene067323:intron |
| ACGGCTTCAAGTGCTTACTT+AGG | 0.518485 | 8.4:-70515591 | MS.gene067323:CDS |
| CTAGTGCCAAAGGGGTTATG+TGG | 0.518507 | 8.4:-70515651 | MS.gene067323:CDS |
| AATGAAGGAAGTGGACGAAA+AGG | 0.518736 | 8.4:+70529995 | None:intergenic |
| TGGTATGGTTTAACAATAGG+TGG | 0.522598 | 8.4:-70526923 | MS.gene067323:CDS |
| TGGTATGGTTTAACAATAGG+TGG | 0.522598 | 8.4:-70530779 | MS.gene067323:CDS |
| GTAATGGATCGCTTGAACAT+GGG | 0.523068 | 8.4:+70519037 | None:intergenic |
| AAAGATAACAACATGTGCTT+GGG | 0.530045 | 8.4:-70515772 | MS.gene067323:CDS |
| AAATCTTCAACCATGTTGAA+GGG | 0.532978 | 8.4:-70531253 | None:intergenic |
| CAAAGTCTAATGCATCCTCT+TGG | 0.533319 | 8.4:+70515565 | None:intergenic |
| CAAGTGCTTGGAATAAAAGA+AGG | 0.533447 | 8.4:-70515312 | MS.gene067323:CDS |
| CAAATGCTTGGATTAAAAGA+AGG | 0.533447 | 8.4:-70529085 | MS.gene067323:CDS |
| ACATGGACGGATCAAGTGCT+TGG | 0.535057 | 8.4:-70515324 | MS.gene067323:CDS |
| TCCAATGCCAAAGCAAATGA+AGG | 0.535087 | 8.4:+70529980 | None:intergenic |
| TGTAATGGATCGCTTGAACA+TGG | 0.535640 | 8.4:+70519036 | None:intergenic |
| GCCAAAGCAAATGAAGGAAG+TGG | 0.536020 | 8.4:+70529986 | None:intergenic |
| TATATAGCTTTGTGTTGACT+CGG | 0.538098 | 8.4:+70530076 | None:intergenic |
| GTGCTCATGGAAGCACATTG+TGG | 0.539693 | 8.4:-70530742 | MS.gene067323:CDS |
| AGCCAGTGCAATGGAAGGAG+TGG | 0.541636 | 8.4:+70518838 | None:intergenic |
| AAGATATTCATTGCAATCCA+AGG | 0.541954 | 8.4:-70515236 | MS.gene067323:CDS |
| ATGATTGGAACTGGTGCTCA+TGG | 0.542136 | 8.4:-70530755 | MS.gene067323:CDS |
| CAAGCGATCCATTACATATG+TGG | 0.543977 | 8.4:-70519029 | MS.gene067323:CDS |
| AATGGAAGGAGTGGGACGAA+AGG | 0.544229 | 8.4:+70518847 | None:intergenic |
| GTGGAATTGAGCAATACAAT+GGG | 0.544599 | 8.4:-70515632 | MS.gene067323:CDS |
| ATTCATTGCAATCCAAGGAA+AGG | 0.547480 | 8.4:-70515231 | MS.gene067323:CDS |
| ATAGGTGGAATGATTGGAAC+TGG | 0.547534 | 8.4:-70530764 | MS.gene067323:CDS |
| AGATAGCTTTGTGTTGACTT+GGG | 0.549387 | 8.4:+70518930 | None:intergenic |
| GGAAGAGAAAACAATAACAT+TGG | 0.549525 | 8.4:-70530876 | MS.gene067323:CDS |
| AATTCTAATGCGTTATGTCA+CGG | 0.551733 | 8.4:-70529383 | MS.gene067323:CDS |
| AGGAAACATTCCATAGGAGT+TGG | 0.556199 | 8.4:+70531108 | None:intergenic |
| ATGATCGGAACTGGTGCTCA+TGG | 0.556298 | 8.4:-70526899 | MS.gene067323:CDS |
| TAGACCGGGCAAAATTTACA+AGG | 0.556346 | 8.4:-70515199 | MS.gene067323:CDS |
| GCTAGTTCAACTAGTGCCAA+AGG | 0.560896 | 8.4:-70515661 | MS.gene067323:CDS |
| CTTGTAGGTATAATCTTCAC+CGG | 0.563511 | 8.4:-70515864 | MS.gene067323:intron |
| GAATCCAGTAGTTATGCTGA+TGG | 0.563591 | 8.4:-70529822 | MS.gene067323:CDS |
| AGAATATCTTCATAAACCCT+AGG | 0.565816 | 8.4:+70515507 | None:intergenic |
| GAGGATCTTGATGAATTCAC+TGG | 0.566382 | 8.4:-70516068 | MS.gene067323:CDS |
| GATTCTAATGCGTTATGTCA+CGG | 0.567564 | 8.4:-70515610 | MS.gene067323:CDS |
| TATGTCCCGAAGATTCAAAT+GGG | 0.569596 | 8.4:-70530946 | MS.gene067323:CDS |
| GCCAGTGCAATGGAAGGAGT+GGG | 0.572301 | 8.4:+70518839 | None:intergenic |
| TATGTCCAGAAGATTCAAAT+GGG | 0.573247 | 8.4:-70527090 | MS.gene067323:CDS |
| AGGGAACATTCCATATGAGT+TGG | 0.574379 | 8.4:+70527252 | None:intergenic |
| TCATAAAGCCTAGGAGTCAT+CGG | 0.576297 | 8.4:+70529289 | None:intergenic |
| ATATAGCTTTGTGTTGACTC+GGG | 0.576413 | 8.4:+70530077 | None:intergenic |
| CCCATAAACACATCTGGCAA+TGG | 0.577105 | 8.4:-70518887 | MS.gene067323:CDS |
| AAAACGTCTTCATAAAGCCT+AGG | 0.577155 | 8.4:+70529280 | None:intergenic |
| TTCTGTTCATGACTATGTTG+TGG | 0.577795 | 8.4:-70530708 | MS.gene067323:CDS |
| AATGCAGCTAAAGTATCACT+TGG | 0.578730 | 8.4:-70526746 | MS.gene067323:CDS |
| AATGCAGCTAAAGTATCACT+TGG | 0.578730 | 8.4:-70530602 | MS.gene067323:CDS |
| TTCAGATTTGGGAGATCAAG+TGG | 0.578792 | 8.4:-70518996 | MS.gene067323:CDS |
| TATAATCTTCACCGGATACC+CGG | 0.581512 | 8.4:-70529628 | MS.gene067323:CDS |
| GAGCCATTGGATCTTTGCTA+CGG | 0.582368 | 8.4:+70515529 | None:intergenic |
| TGTGTAGGTATAATCTTCAC+CGG | 0.583295 | 8.4:-70529636 | MS.gene067323:intron |
| CGTGTCCACGAAAATACACC+AGG | 0.585940 | 8.4:-70530040 | MS.gene067323:CDS |
| AAATCGTATAGACCATCGCC+TGG | 0.586529 | 8.4:+70530022 | None:intergenic |
| CACTTGATTGGATCTTCTGG+GGG | 0.588121 | 8.4:+70531163 | None:intergenic |
| TTTCTATTCTTACCCCAATG+AGG | 0.589593 | 8.4:+70515441 | None:intergenic |
| TATCCATCTTCATAATCTGA+AGG | 0.592184 | 8.4:+70530668 | None:intergenic |
| TGGAAGGAGTGGGACGAAAG+GGG | 0.592595 | 8.4:+70518849 | None:intergenic |
| TTAACAATAGGTGGAATGAT+CGG | 0.595792 | 8.4:-70526914 | MS.gene067323:CDS |
| TGCTGTTCATGACTATGTTG+TGG | 0.597583 | 8.4:-70526852 | MS.gene067323:CDS |
| ACACTTGATTGGATCTTCTG+GGG | 0.598425 | 8.4:+70531162 | None:intergenic |
| AAAGTCGTCTTCAGTCATCT+GGG | 0.602499 | 8.4:-70529593 | MS.gene067323:CDS |
| TCTTATGGCAGCCAGTGCAA+TGG | 0.603219 | 8.4:+70518829 | None:intergenic |
| TTGTGAGAAACCCTTCAACA+TGG | 0.604503 | 8.4:+70531243 | None:intergenic |
| AGATAAACTAACTCTAAATG+TGG | 0.605438 | 8.4:+70515716 | None:intergenic |
| GTGCTCATGGAAGCACATTG+TGG | 0.605590 | 8.4:-70526886 | MS.gene067323:CDS |
| CTCTACATATAGTTCTATCA+GGG | 0.611082 | 8.4:+70527233 | None:intergenic |
| TGTGGAATTGAGCAATACAA+TGG | 0.611294 | 8.4:-70515633 | MS.gene067323:CDS |
| ATAGAGCCAGAAGGTCTATG+TGG | 0.614817 | 8.4:-70529424 | MS.gene067323:CDS |
| TATAGAGGGTTGCCTCATTG+GGG | 0.616951 | 8.4:-70529226 | MS.gene067323:CDS |
| TTACCGTAGCAAAGATCCAA+TGG | 0.619712 | 8.4:-70515532 | MS.gene067323:CDS |
| GAGTCATCGGATCTTTACTA+CGG | 0.623579 | 8.4:+70529302 | None:intergenic |
| TCTATCAGGAAACATTCCAT+AGG | 0.624377 | 8.4:+70531102 | None:intergenic |
| ATGGCAGCCAGTGCAATGGA+AGG | 0.624939 | 8.4:+70518833 | None:intergenic |
| GACTTTGAAATCCGATAACC+GGG | 0.628203 | 8.4:+70529610 | None:intergenic |
| CACGAAAATACACCAGGCGA+TGG | 0.631463 | 8.4:-70530034 | MS.gene067323:CDS |
| AAAACAATAGCATTGGAGAG+TGG | 0.640669 | 8.4:-70527013 | MS.gene067323:CDS |
| TTAGTTCAAATAGAGCCAGA+AGG | 0.643461 | 8.4:-70529433 | MS.gene067323:CDS |
| GCTCATGGAAGCACATTGTG+GGG | 0.650279 | 8.4:-70530740 | MS.gene067323:CDS |
| AAAACAATAACATTGGAGAG+TGG | 0.652668 | 8.4:-70530869 | MS.gene067323:CDS |
| TTGGGGTAAGAATAGAAATG+TGG | 0.660182 | 8.4:-70515436 | MS.gene067323:CDS |
| AAAGAGAAATATGATTCACA+AGG | 0.660324 | 8.4:-70529133 | MS.gene067323:CDS |
| ATGAGTTTGCAGACATAACG+TGG | 0.663531 | 8.4:-70530102 | MS.gene067323:CDS |
| CTCATGGAAGCACATTGTGG+GGG | 0.664423 | 8.4:-70530739 | MS.gene067323:CDS |
| TGTAGATAGTACAATAACAG+AGG | 0.668513 | 8.4:+70531186 | None:intergenic |
| GATGTTATATGTAAATCTTG+AGG | 0.669322 | 8.4:+70529555 | None:intergenic |
| AAGAGAAATATGATTCACAA+GGG | 0.671054 | 8.4:-70529132 | MS.gene067323:CDS |
| TATGCTGATGGAAAGTGCAT+AGG | 0.671267 | 8.4:-70529810 | MS.gene067323:CDS |
| ATAGAGGGTTGCCTCATTGG+GGG | 0.672617 | 8.4:-70529225 | MS.gene067323:CDS |
| ATGAGTTTGCAGATATATCG+TGG | 0.673607 | 8.4:-70518955 | MS.gene067323:CDS |
| TATCCATCTTCAGAATCCGA+AGG | 0.677169 | 8.4:+70526812 | None:intergenic |
| TAGTTCAACTAGTGCCAAAG+GGG | 0.680746 | 8.4:-70515659 | MS.gene067323:CDS |
| TATGGAGGGTTACCTCATTG+GGG | 0.706301 | 8.4:-70515453 | MS.gene067323:CDS |
| TGCTTACTTAGGAAACCAAG+AGG | 0.708136 | 8.4:-70515580 | MS.gene067323:CDS |
| AAAGAGAAATATGATTCACA+AGG | 0.709239 | 8.4:-70515360 | MS.gene067323:CDS |
| ACCGGGCAAAATTTACAAGG+AGG | 0.716664 | 8.4:-70515196 | MS.gene067323:CDS |
| AAGCACGAAATATCTCAACA+AGG | 0.722713 | 8.4:-70527059 | MS.gene067323:CDS |
| AAGCACAAAATATCTCAACA+AGG | 0.725245 | 8.4:-70530915 | MS.gene067323:CDS |
| GCTCATGGAAGCACATTGTG+GGG | 0.736799 | 8.4:-70526884 | MS.gene067323:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 70515173 | 70531263 | 70515173 | ID=MS.gene067323 |
| chr8.4 | mRNA | 70515173 | 70531263 | 70515173 | ID=MS.gene067323.t1;Parent=MS.gene067323 |
| chr8.4 | exon | 70530580 | 70531263 | 70530580 | ID=MS.gene067323.t1.exon1;Parent=MS.gene067323.t1 |
| chr8.4 | CDS | 70530580 | 70531263 | 70530580 | ID=cds.MS.gene067323.t1;Parent=MS.gene067323.t1 |
| chr8.4 | exon | 70529969 | 70530224 | 70529969 | ID=MS.gene067323.t1.exon2;Parent=MS.gene067323.t1 |
| chr8.4 | CDS | 70529969 | 70530224 | 70529969 | ID=cds.MS.gene067323.t1;Parent=MS.gene067323.t1 |
| chr8.4 | exon | 70529754 | 70529855 | 70529754 | ID=MS.gene067323.t1.exon3;Parent=MS.gene067323.t1 |
| chr8.4 | CDS | 70529754 | 70529855 | 70529754 | ID=cds.MS.gene067323.t1;Parent=MS.gene067323.t1 |
| chr8.4 | exon | 70529553 | 70529651 | 70529553 | ID=MS.gene067323.t1.exon4;Parent=MS.gene067323.t1 |
| chr8.4 | CDS | 70529553 | 70529651 | 70529553 | ID=cds.MS.gene067323.t1;Parent=MS.gene067323.t1 |
| chr8.4 | exon | 70529050 | 70529466 | 70529050 | ID=MS.gene067323.t1.exon5;Parent=MS.gene067323.t1 |
| chr8.4 | CDS | 70529050 | 70529466 | 70529050 | ID=cds.MS.gene067323.t1;Parent=MS.gene067323.t1 |
| chr8.4 | exon | 70526724 | 70527322 | 70526724 | ID=MS.gene067323.t1.exon6;Parent=MS.gene067323.t1 |
| chr8.4 | CDS | 70526724 | 70527322 | 70526724 | ID=cds.MS.gene067323.t1;Parent=MS.gene067323.t1 |
| chr8.4 | exon | 70518822 | 70519077 | 70518822 | ID=MS.gene067323.t1.exon7;Parent=MS.gene067323.t1 |
| chr8.4 | CDS | 70518822 | 70519077 | 70518822 | ID=cds.MS.gene067323.t1;Parent=MS.gene067323.t1 |
| chr8.4 | exon | 70515988 | 70516089 | 70515988 | ID=MS.gene067323.t1.exon8;Parent=MS.gene067323.t1 |
| chr8.4 | CDS | 70515988 | 70516089 | 70515988 | ID=cds.MS.gene067323.t1;Parent=MS.gene067323.t1 |
| chr8.4 | exon | 70515173 | 70515879 | 70515173 | ID=MS.gene067323.t1.exon9;Parent=MS.gene067323.t1 |
| chr8.4 | CDS | 70515173 | 70515879 | 70515173 | ID=cds.MS.gene067323.t1;Parent=MS.gene067323.t1 |
| Gene Sequence |
| Protein sequence |