Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene067336.t1 | XP_013444541.1 | 97.2 | 283 | 6 | 1 | 1 | 283 | 1 | 281 | 6.10E-116 | 427.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene067336.t1 | Q9FI03 | 34.0 | 153 | 99 | 1 | 107 | 257 | 34 | 186 | 5.9e-19 | 96.3 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene067336.t1 | A0A072TMX2 | 97.2 | 283 | 6 | 1 | 1 | 283 | 1 | 281 | 4.4e-116 | 427.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene007146 | MS.gene067336 | PPI |
MS.gene025640 | MS.gene067336 | PPI |
MS.gene050363 | MS.gene067336 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene067336.t1 | MTR_8g024250 | 97.173 | 283 | 6 | 1 | 1 | 283 | 1 | 281 | 0.0 | 563 |
MS.gene067336.t1 | MTR_7g118270 | 63.784 | 185 | 67 | 0 | 98 | 282 | 44 | 228 | 3.77e-89 | 265 |
MS.gene067336.t1 | MTR_7g106050 | 37.013 | 154 | 97 | 0 | 104 | 257 | 24 | 177 | 1.56e-29 | 111 |
MS.gene067336.t1 | MTR_4g051880 | 34.507 | 142 | 85 | 1 | 124 | 257 | 45 | 186 | 7.47e-22 | 91.3 |
MS.gene067336.t1 | MTR_3g092790 | 33.333 | 150 | 99 | 1 | 123 | 272 | 49 | 197 | 1.28e-21 | 90.5 |
MS.gene067336.t1 | MTR_2g086790 | 30.233 | 172 | 107 | 3 | 98 | 257 | 17 | 187 | 3.36e-20 | 87.0 |
MS.gene067336.t1 | MTR_1g057420 | 30.464 | 151 | 105 | 0 | 119 | 269 | 39 | 189 | 5.51e-20 | 86.3 |
MS.gene067336.t1 | MTR_2g011350 | 25.949 | 158 | 113 | 3 | 111 | 266 | 35 | 190 | 5.09e-15 | 72.4 |
MS.gene067336.t1 | MTR_5g087760 | 26.705 | 176 | 117 | 6 | 97 | 261 | 60 | 234 | 1.85e-12 | 66.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene067336.t1 | AT4G01410 | 49.462 | 186 | 94 | 0 | 97 | 282 | 41 | 226 | 1.11e-56 | 182 |
MS.gene067336.t1 | AT3G44220 | 29.609 | 179 | 123 | 1 | 107 | 282 | 27 | 205 | 2.01e-24 | 97.8 |
MS.gene067336.t1 | AT3G52470 | 30.857 | 175 | 115 | 4 | 98 | 269 | 17 | 188 | 2.70e-24 | 97.8 |
MS.gene067336.t1 | AT5G53730 | 33.557 | 149 | 97 | 1 | 111 | 257 | 38 | 186 | 4.41e-24 | 97.4 |
MS.gene067336.t1 | AT2G35960 | 30.968 | 155 | 107 | 0 | 115 | 269 | 36 | 190 | 2.34e-23 | 95.1 |
MS.gene067336.t1 | AT5G22200 | 32.692 | 156 | 105 | 0 | 119 | 274 | 43 | 198 | 5.26e-23 | 94.4 |
MS.gene067336.t1 | AT5G06330 | 35.220 | 159 | 93 | 7 | 119 | 271 | 39 | 193 | 7.69e-23 | 94.0 |
MS.gene067336.t1 | AT3G11660 | 33.735 | 166 | 101 | 7 | 97 | 257 | 16 | 177 | 1.73e-22 | 92.8 |
MS.gene067336.t1 | AT4G09590 | 29.814 | 161 | 113 | 0 | 101 | 261 | 23 | 183 | 2.57e-22 | 92.4 |
MS.gene067336.t1 | AT2G35970 | 30.435 | 161 | 112 | 0 | 101 | 261 | 23 | 183 | 9.57e-22 | 90.9 |
MS.gene067336.t1 | AT5G22870 | 27.933 | 179 | 122 | 2 | 86 | 258 | 9 | 186 | 1.98e-16 | 76.6 |
MS.gene067336.t1 | AT4G05220 | 24.405 | 168 | 125 | 2 | 101 | 268 | 47 | 212 | 1.45e-15 | 74.3 |
MS.gene067336.t1 | AT1G61760 | 27.374 | 179 | 127 | 2 | 101 | 278 | 45 | 221 | 4.74e-15 | 73.2 |
MS.gene067336.t1 | AT2G35980 | 27.848 | 158 | 113 | 1 | 104 | 260 | 45 | 202 | 8.66e-13 | 66.6 |
Find 73 sgRNAs with CRISPR-Local
Find 83 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGACGTGGTTGTTCCATTTC+AGG | 0.182704 | 8.4:-70804328 | None:intergenic |
GTGGGTCAGATTCCTCTTAT+TGG | 0.186108 | 8.4:+70805018 | MS.gene067336:CDS |
TGTCGTGGTTGTTCCATTTC+GGG | 0.198552 | 8.4:-70804412 | None:intergenic |
TGACGTGGTTGTTCCATTTC+GGG | 0.199740 | 8.4:-70804370 | None:intergenic |
GCATTATAATCCTCATCTTA+TGG | 0.245398 | 8.4:+70804551 | MS.gene067336:CDS |
TTGTCGTGGTTGTTCCATTT+CGG | 0.261861 | 8.4:-70804413 | None:intergenic |
TTGACGTGGTTGTTCCATTT+CGG | 0.262171 | 8.4:-70804371 | None:intergenic |
CATATGCAATGTTCACGTTT+TGG | 0.290407 | 8.4:-70804502 | None:intergenic |
TTCAAAACATCCACCGAAAC+TGG | 0.309717 | 8.4:-70804847 | None:intergenic |
TTGGTGTTGGATGAGAATTA+TGG | 0.323767 | 8.4:+70804874 | MS.gene067336:CDS |
TGGTGTTGGATGAGAATTAT+GGG | 0.333006 | 8.4:+70804875 | MS.gene067336:CDS |
TAAATGGATACACGTTTGTT+TGG | 0.340333 | 8.4:-70804694 | None:intergenic |
GGAAAGCCTGTCAAAGTAAA+TGG | 0.359178 | 8.4:-70804710 | None:intergenic |
TGTGAATGGGGTTGTTGGTT+AGG | 0.359389 | 8.4:-70804256 | None:intergenic |
TATGCTTCCATCGCTTTACT+TGG | 0.363370 | 8.4:+70804774 | MS.gene067336:CDS |
AGGCGTGCCGGTTCCAGTTT+CGG | 0.370573 | 8.4:+70804834 | MS.gene067336:CDS |
GTCACAAGTGCTGCAATCTA+TGG | 0.378150 | 8.4:+70804607 | MS.gene067336:CDS |
ACAATCTTCTTCCTCGTACT+TGG | 0.399240 | 8.4:+70804529 | MS.gene067336:CDS |
AGCATATGATGAGGCGTAAT+CGG | 0.403211 | 8.4:-70804757 | None:intergenic |
ACCGGCACGCCTCCTAAAAC+TGG | 0.405172 | 8.4:-70804823 | None:intergenic |
GCCAAGTGTGATTTATTGTT+GGG | 0.416075 | 8.4:+70804979 | MS.gene067336:CDS |
TGCAATTTACAATCTTCATA+AGG | 0.420084 | 8.4:+70804668 | MS.gene067336:CDS |
GGATGAGAATTATGGGGTGG+TGG | 0.422334 | 8.4:+70804882 | MS.gene067336:CDS |
AACCATACCTTTGTGTTCCA+TGG | 0.429303 | 8.4:-70804455 | None:intergenic |
TGCCAAGTGTGATTTATTGT+TGG | 0.432416 | 8.4:+70804978 | MS.gene067336:CDS |
ACGTCGTCAATACCCTGAAA+TGG | 0.435785 | 8.4:+70804315 | MS.gene067336:CDS |
GTGTATCCATTTACTTTGAC+AGG | 0.438624 | 8.4:+70804704 | MS.gene067336:CDS |
GGTAGGTTGAGGTGGAAAAC+TGG | 0.445600 | 8.4:+70804925 | MS.gene067336:CDS |
TTATTGTTGGGTTTGAAGAA+AGG | 0.446899 | 8.4:+70804991 | MS.gene067336:CDS |
GACGTGGTTGTTCCATTTCA+GGG | 0.447247 | 8.4:-70804327 | None:intergenic |
GATGAGAATTATGGGGTGGT+GGG | 0.453278 | 8.4:+70804883 | MS.gene067336:CDS |
TATGTATCCACATCACAAAC+TGG | 0.461285 | 8.4:-70805045 | None:intergenic |
ACGTCATCAATATCCCGAAA+TGG | 0.462255 | 8.4:+70804357 | MS.gene067336:CDS |
ACGTCATCAATATCCCGAAA+TGG | 0.462255 | 8.4:+70804399 | MS.gene067336:CDS |
GATGTTGTGAATGGGGTTGT+TGG | 0.473428 | 8.4:-70804261 | None:intergenic |
CAAACTGGAGCACCAATAAG+AGG | 0.488904 | 8.4:-70805030 | None:intergenic |
ACATCCACCGAAACTGGAAC+CGG | 0.491068 | 8.4:-70804841 | None:intergenic |
GGTGTGAAACTTATATTTCA+AGG | 0.491276 | 8.4:+70804904 | MS.gene067336:CDS |
TGCATTGAGATTGACATGTC+TGG | 0.499930 | 8.4:-70804649 | None:intergenic |
GGTTTGAAGAAAGGTCTTGT+GGG | 0.505112 | 8.4:+70805000 | MS.gene067336:CDS |
TGAAACTTATATTTCAAGGT+AGG | 0.512336 | 8.4:+70804908 | MS.gene067336:CDS |
TTATATTTCAAGGTAGGTTG+AGG | 0.513313 | 8.4:+70804914 | MS.gene067336:CDS |
AGGGAAATGATGTTGTGAAT+GGG | 0.518707 | 8.4:-70804269 | None:intergenic |
TAGGGAAATGATGTTGTGAA+TGG | 0.522309 | 8.4:-70804270 | None:intergenic |
ACCATACCTTTGTGTTCCAT+GGG | 0.526647 | 8.4:-70804454 | None:intergenic |
TATTTCAAGGTAGGTTGAGG+TGG | 0.531815 | 8.4:+70804917 | MS.gene067336:CDS |
GGGTTTGAAGAAAGGTCTTG+TGG | 0.531873 | 8.4:+70804999 | MS.gene067336:CDS |
TGACGACGTTGTTGTTGTTG+TGG | 0.538741 | 8.4:-70804301 | None:intergenic |
TCCCATGGAACACAAAGGTA+TGG | 0.547214 | 8.4:+70804453 | MS.gene067336:CDS |
GGTGTTGGATGAGAATTATG+GGG | 0.556537 | 8.4:+70804876 | MS.gene067336:CDS |
TGCTTCTCCAAGTAAAGCGA+TGG | 0.561546 | 8.4:-70804781 | None:intergenic |
TGGTGCTCCAGTTTGTGATG+TGG | 0.562878 | 8.4:+70805038 | MS.gene067336:CDS |
GGGAAATGATGTTGTGAATG+GGG | 0.563425 | 8.4:-70804268 | None:intergenic |
ACCCAACAATAAATCACACT+TGG | 0.575443 | 8.4:-70804980 | None:intergenic |
TGATGTCGTTGTTGTTGTCG+TGG | 0.587065 | 8.4:-70804427 | None:intergenic |
TATGATGAGGCGTAATCGGA+TGG | 0.604145 | 8.4:-70804753 | None:intergenic |
CGTGCCGGTTCCAGTTTCGG+TGG | 0.607622 | 8.4:+70804837 | MS.gene067336:CDS |
ACAACGACATCAATATCCCA+TGG | 0.615164 | 8.4:+70804438 | MS.gene067336:CDS |
GCACTTGTGACTGTGATGTG+AGG | 0.630907 | 8.4:-70804595 | None:intergenic |
TGATGACGTTGTTGTTGACG+TGG | 0.649666 | 8.4:-70804343 | None:intergenic |
TGATGACGTTGTTGTTGACG+TGG | 0.649666 | 8.4:-70804385 | None:intergenic |
GGTATGCAAGCCATAAGATG+AGG | 0.669740 | 8.4:-70804561 | None:intergenic |
ATGGTTTCTATATGACACAA+AGG | 0.671270 | 8.4:-70804734 | None:intergenic |
AGCGATGGAAGCATATGATG+AGG | 0.674282 | 8.4:-70804766 | None:intergenic |
GGATTATAATGCCAAGTACG+AGG | 0.674453 | 8.4:-70804540 | None:intergenic |
CAATATCCCATGGAACACAA+AGG | 0.680881 | 8.4:+70804448 | MS.gene067336:CDS |
GTTGGATGAGAATTATGGGG+TGG | 0.688698 | 8.4:+70804879 | MS.gene067336:CDS |
GGAGAAGCATGAAACCGTGT+CGG | 0.692283 | 8.4:+70804795 | MS.gene067336:CDS |
TAAAACTGGTGATACCGACA+CGG | 0.699605 | 8.4:-70804809 | None:intergenic |
ATTGAGATTGACATGTCTGG+TGG | 0.701504 | 8.4:-70804646 | None:intergenic |
GTTTCTATATGACACAAAGG+CGG | 0.718743 | 8.4:-70804731 | None:intergenic |
GCATTAGGTACTCTATAACG+AGG | 0.741839 | 8.4:-70804478 | None:intergenic |
CTGGTGGTGAAGTTGCATTG+AGG | 0.741850 | 8.4:-70804630 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
! | TGAAACTTATATTTCAAGGT+AGG | + | chr8.4:70804908-70804927 | MS.gene067336:CDS | 25.0% |
! | TGCAATTTACAATCTTCATA+AGG | + | chr8.4:70804668-70804687 | MS.gene067336:CDS | 25.0% |
ATGGTTTCTATATGACACAA+AGG | - | chr8.4:70804737-70804756 | None:intergenic | 30.0% | |
GCATTATAATCCTCATCTTA+TGG | + | chr8.4:70804551-70804570 | MS.gene067336:CDS | 30.0% | |
GGTGTGAAACTTATATTTCA+AGG | + | chr8.4:70804904-70804923 | MS.gene067336:CDS | 30.0% | |
TAAATGGATACACGTTTGTT+TGG | - | chr8.4:70804697-70804716 | None:intergenic | 30.0% | |
TTATATTTCAAGGTAGGTTG+AGG | + | chr8.4:70804914-70804933 | MS.gene067336:CDS | 30.0% | |
TTATTGTTGGGTTTGAAGAA+AGG | + | chr8.4:70804991-70805010 | MS.gene067336:CDS | 30.0% | |
ACCCAACAATAAATCACACT+TGG | - | chr8.4:70804983-70805002 | None:intergenic | 35.0% | |
AGGGAAATGATGTTGTGAAT+GGG | - | chr8.4:70804272-70804291 | None:intergenic | 35.0% | |
GCCAAGTGTGATTTATTGTT+GGG | + | chr8.4:70804979-70804998 | MS.gene067336:CDS | 35.0% | |
GTGTATCCATTTACTTTGAC+AGG | + | chr8.4:70804704-70804723 | MS.gene067336:CDS | 35.0% | |
GTTTCTATATGACACAAAGG+CGG | - | chr8.4:70804734-70804753 | None:intergenic | 35.0% | |
TAGGGAAATGATGTTGTGAA+TGG | - | chr8.4:70804273-70804292 | None:intergenic | 35.0% | |
TATGTATCCACATCACAAAC+TGG | - | chr8.4:70805048-70805067 | None:intergenic | 35.0% | |
TGCCAAGTGTGATTTATTGT+TGG | + | chr8.4:70804978-70804997 | MS.gene067336:CDS | 35.0% | |
! | CATATGCAATGTTCACGTTT+TGG | - | chr8.4:70804505-70804524 | None:intergenic | 35.0% |
! | GTTGTTGTGGCATTTTGTTA+GGG | - | chr8.4:70804291-70804310 | None:intergenic | 35.0% |
! | TGGTGTTGGATGAGAATTAT+GGG | + | chr8.4:70804875-70804894 | MS.gene067336:CDS | 35.0% |
! | TGTTGTTGTGGCATTTTGTT+AGG | - | chr8.4:70804292-70804311 | None:intergenic | 35.0% |
!! | TTGGTGTTGGATGAGAATTA+TGG | + | chr8.4:70804874-70804893 | MS.gene067336:CDS | 35.0% |
!!! | TGTTTTGAATGGTTTGGTGT+TGG | + | chr8.4:70804861-70804880 | MS.gene067336:CDS | 35.0% |
AACCATACCTTTGTGTTCCA+TGG | - | chr8.4:70804458-70804477 | None:intergenic | 40.0% | |
ACAACGACATCAATATCCCA+TGG | + | chr8.4:70804438-70804457 | MS.gene067336:CDS | 40.0% | |
ACAATCTTCTTCCTCGTACT+TGG | + | chr8.4:70804529-70804548 | MS.gene067336:CDS | 40.0% | |
ACCATACCTTTGTGTTCCAT+GGG | - | chr8.4:70804457-70804476 | None:intergenic | 40.0% | |
ACGTCATCAATATCCCGAAA+TGG | + | chr8.4:70804357-70804376 | MS.gene067336:CDS | 40.0% | |
AGCATATGATGAGGCGTAAT+CGG | - | chr8.4:70804760-70804779 | None:intergenic | 40.0% | |
ATTGAGATTGACATGTCTGG+TGG | - | chr8.4:70804649-70804668 | None:intergenic | 40.0% | |
CAATATCCCATGGAACACAA+AGG | + | chr8.4:70804448-70804467 | MS.gene067336:CDS | 40.0% | |
GCATTAGGTACTCTATAACG+AGG | - | chr8.4:70804481-70804500 | None:intergenic | 40.0% | |
GGAAAGCCTGTCAAAGTAAA+TGG | - | chr8.4:70804713-70804732 | None:intergenic | 40.0% | |
GGATTATAATGCCAAGTACG+AGG | - | chr8.4:70804543-70804562 | None:intergenic | 40.0% | |
GGGAAATGATGTTGTGAATG+GGG | - | chr8.4:70804271-70804290 | None:intergenic | 40.0% | |
TAAAACTGGTGATACCGACA+CGG | - | chr8.4:70804812-70804831 | None:intergenic | 40.0% | |
TATGCTTCCATCGCTTTACT+TGG | + | chr8.4:70804774-70804793 | MS.gene067336:CDS | 40.0% | |
TGCATTGAGATTGACATGTC+TGG | - | chr8.4:70804652-70804671 | None:intergenic | 40.0% | |
TTCAAAACATCCACCGAAAC+TGG | - | chr8.4:70804850-70804869 | None:intergenic | 40.0% | |
TTGACGTGGTTGTTCCATTT+CGG | - | chr8.4:70804332-70804351 | None:intergenic | 40.0% | |
TTGTCGTGGTTGTTCCATTT+CGG | - | chr8.4:70804416-70804435 | None:intergenic | 40.0% | |
! | GGTGTTGGATGAGAATTATG+GGG | + | chr8.4:70804876-70804895 | MS.gene067336:CDS | 40.0% |
! | GGTTTGAAGAAAGGTCTTGT+GGG | + | chr8.4:70805000-70805019 | MS.gene067336:CDS | 40.0% |
! | TATTTCAAGGTAGGTTGAGG+TGG | + | chr8.4:70804917-70804936 | MS.gene067336:CDS | 40.0% |
!! | ACTGTGATGTGAGGTTTTGA+GGG | - | chr8.4:70804589-70804608 | None:intergenic | 40.0% |
!! | GGTGGATGTTTTGAATGGTT+TGG | + | chr8.4:70804855-70804874 | MS.gene067336:CDS | 40.0% |
!! | GTTTCGGTGGATGTTTTGAA+TGG | + | chr8.4:70804850-70804869 | MS.gene067336:CDS | 40.0% |
!!! | TGTTCACGTTTTGGAGCATT+AGG | - | chr8.4:70804496-70804515 | None:intergenic | 40.0% |
ACGTCGTCAATACCCTGAAA+TGG | + | chr8.4:70804315-70804334 | MS.gene067336:CDS | 45.0% | |
GACGTGGTTGTTCCATTTCA+GGG | - | chr8.4:70804330-70804349 | None:intergenic | 45.0% | |
GATGAGAATTATGGGGTGGT+GGG | + | chr8.4:70804883-70804902 | MS.gene067336:CDS | 45.0% | |
GATGTTGTGAATGGGGTTGT+TGG | - | chr8.4:70804264-70804283 | None:intergenic | 45.0% | |
GGGTTTGAAGAAAGGTCTTG+TGG | + | chr8.4:70804999-70805018 | MS.gene067336:CDS | 45.0% | |
GGTATGCAAGCCATAAGATG+AGG | - | chr8.4:70804564-70804583 | None:intergenic | 45.0% | |
GTGGGTCAGATTCCTCTTAT+TGG | + | chr8.4:70805018-70805037 | MS.gene067336:CDS | 45.0% | |
GTTGGATGAGAATTATGGGG+TGG | + | chr8.4:70804879-70804898 | MS.gene067336:CDS | 45.0% | |
TATGATGAGGCGTAATCGGA+TGG | - | chr8.4:70804756-70804775 | None:intergenic | 45.0% | |
TCCCATGGAACACAAAGGTA+TGG | + | chr8.4:70804453-70804472 | MS.gene067336:CDS | 45.0% | |
TGACGTGGTTGTTCCATTTC+AGG | - | chr8.4:70804331-70804350 | None:intergenic | 45.0% | |
TGACGTGGTTGTTCCATTTC+GGG | - | chr8.4:70804331-70804350 | None:intergenic | 45.0% | |
TGCTTCTCCAAGTAAAGCGA+TGG | - | chr8.4:70804784-70804803 | None:intergenic | 45.0% | |
TGTCGTGGTTGTTCCATTTC+GGG | - | chr8.4:70804415-70804434 | None:intergenic | 45.0% | |
! | AGCGATGGAAGCATATGATG+AGG | - | chr8.4:70804769-70804788 | None:intergenic | 45.0% |
! | CAAACTGGAGCACCAATAAG+AGG | - | chr8.4:70805033-70805052 | None:intergenic | 45.0% |
! | GACTGTGATGTGAGGTTTTG+AGG | - | chr8.4:70804590-70804609 | None:intergenic | 45.0% |
! | GTCACAAGTGCTGCAATCTA+TGG | + | chr8.4:70804607-70804626 | MS.gene067336:CDS | 45.0% |
! | TGACGACGTTGTTGTTGTTG+TGG | - | chr8.4:70804304-70804323 | None:intergenic | 45.0% |
! | TGATGACGTTGTTGTTGACG+TGG | - | chr8.4:70804346-70804365 | None:intergenic | 45.0% |
! | TGATGTCGTTGTTGTTGTCG+TGG | - | chr8.4:70804430-70804449 | None:intergenic | 45.0% |
! | TGTGAATGGGGTTGTTGGTT+AGG | - | chr8.4:70804259-70804278 | None:intergenic | 45.0% |
!! | GTGTCGGTATCACCAGTTTT+AGG | + | chr8.4:70804811-70804830 | MS.gene067336:CDS | 45.0% |
!!! | TCGGTATCACCAGTTTTAGG+AGG | + | chr8.4:70804814-70804833 | MS.gene067336:CDS | 45.0% |
!!! | TGATGTGAGGTTTTGAGGGA+TGG | - | chr8.4:70804585-70804604 | None:intergenic | 45.0% |
ACATCCACCGAAACTGGAAC+CGG | - | chr8.4:70804844-70804863 | None:intergenic | 50.0% | |
GCACTTGTGACTGTGATGTG+AGG | - | chr8.4:70804598-70804617 | None:intergenic | 50.0% | |
GGATGAGAATTATGGGGTGG+TGG | + | chr8.4:70804882-70804901 | MS.gene067336:CDS | 50.0% | |
TGGTGCTCCAGTTTGTGATG+TGG | + | chr8.4:70805038-70805057 | MS.gene067336:CDS | 50.0% | |
! | CTGGTGGTGAAGTTGCATTG+AGG | - | chr8.4:70804633-70804652 | None:intergenic | 50.0% |
! | GGAGAAGCATGAAACCGTGT+CGG | + | chr8.4:70804795-70804814 | MS.gene067336:CDS | 50.0% |
! | GGTAGGTTGAGGTGGAAAAC+TGG | + | chr8.4:70804925-70804944 | MS.gene067336:CDS | 50.0% |
!!! | ACCAGTTTTAGGAGGCGTGC+CGG | + | chr8.4:70804822-70804841 | MS.gene067336:CDS | 55.0% |
ACCGGCACGCCTCCTAAAAC+TGG | - | chr8.4:70804826-70804845 | None:intergenic | 60.0% | |
!! | AGGCGTGCCGGTTCCAGTTT+CGG | + | chr8.4:70804834-70804853 | MS.gene067336:CDS | 60.0% |
!! | CGTGCCGGTTCCAGTTTCGG+TGG | + | chr8.4:70804837-70804856 | MS.gene067336:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.4 | gene | 70804217 | 70805068 | 70804217 | ID=MS.gene067336 |
chr8.4 | mRNA | 70804217 | 70805068 | 70804217 | ID=MS.gene067336.t1;Parent=MS.gene067336 |
chr8.4 | exon | 70804217 | 70805068 | 70804217 | ID=MS.gene067336.t1.exon1;Parent=MS.gene067336.t1 |
chr8.4 | CDS | 70804217 | 70805068 | 70804217 | ID=cds.MS.gene067336.t1;Parent=MS.gene067336.t1 |
Gene Sequence |
Protein sequence |