AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene067449

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene067449.t1 MTR_2g103620 77.427 412 48 6 23 430 8 378 0.0 541
MS.gene067449.t1 MTR_2g103640 76.781 379 56 7 27 400 2 353 8.30e-177 501
MS.gene067449.t1 MTR_5g038810 45.010 511 161 9 8 431 6 483 1.70e-110 343
MS.gene067449.t1 MTR_2g091090 43.725 510 170 8 24 425 39 539 5.05e-99 313
MS.gene067449.t1 MTR_2g091015 53.867 375 111 8 115 431 499 869 4.66e-96 311
MS.gene067449.t1 MTR_2g091015 35.061 328 134 9 22 284 51 364 1.92e-27 117
MS.gene067449.t1 MTR_2g091015 36.207 174 91 2 114 270 449 619 2.89e-15 79.3
MS.gene067449.t1 MTR_2g091015 40.397 151 76 3 126 262 303 453 2.84e-14 76.3
MS.gene067449.t1 MTR_2g091015 32.068 237 85 6 133 295 370 604 3.56e-14 75.9
MS.gene067449.t1 MTR_2g091105 42.011 557 167 11 21 430 37 584 1.30e-92 297
MS.gene067449.t1 MTR_2g091030 44.444 531 155 12 23 430 75 588 4.11e-92 293
MS.gene067449.t1 MTR_2g091285 40.959 542 176 11 23 430 58 589 2.76e-87 281
MS.gene067449.t1 MTR_2g091335 54.469 358 120 8 109 430 254 604 1.16e-83 271
MS.gene067449.t1 MTR_2g091335 37.049 305 123 11 23 277 57 342 3.54e-33 134
MS.gene067449.t1 MTR_6g045183 45.202 396 141 8 117 439 284 676 4.82e-79 263
MS.gene067449.t1 MTR_6g045183 33.657 309 127 9 17 270 75 360 4.91e-25 109
MS.gene067449.t1 MTR_5g078510 44.310 413 164 7 80 431 36 443 6.78e-79 257
MS.gene067449.t1 MTR_5g078510 33.516 182 76 3 136 272 1 182 4.57e-14 75.1
MS.gene067449.t1 MTR_2g091240 42.489 466 192 11 35 439 49 499 6.36e-78 256
MS.gene067449.t1 MTR_2g093010 49.041 365 159 9 82 431 468 820 7.24e-77 259
MS.gene067449.t1 MTR_2g093010 41.045 268 112 10 45 274 65 324 1.48e-28 120
MS.gene067449.t1 MTR_2g093010 30.952 252 139 5 40 270 209 446 3.74e-14 75.9
MS.gene067449.t1 MTR_2g093010 49.041 365 159 9 82 431 467 819 9.40e-77 259
MS.gene067449.t1 MTR_2g093010 41.045 268 112 10 45 274 64 323 1.87e-28 120
MS.gene067449.t1 MTR_2g093010 30.952 252 139 5 40 270 208 445 4.15e-14 75.9
MS.gene067449.t1 MTR_2g091245 49.702 336 120 6 128 431 241 559 9.28e-73 244
MS.gene067449.t1 MTR_2g091250 47.396 384 151 7 90 430 816 1191 1.47e-70 245
MS.gene067449.t1 MTR_2g091250 38.438 320 118 7 24 270 52 365 1.33e-41 160
MS.gene067449.t1 MTR_2g091250 40.110 182 88 6 103 270 258 432 4.13e-18 88.6
MS.gene067449.t1 MTR_2g091250 36.649 191 86 3 115 270 480 670 2.86e-17 85.9
MS.gene067449.t1 MTR_2g091250 37.143 210 104 5 82 270 370 572 1.20e-16 84.0
MS.gene067449.t1 MTR_2g091250 39.355 155 77 2 133 270 656 810 1.45e-16 84.0
MS.gene067449.t1 MTR_2g091250 36.879 141 86 1 133 270 586 726 4.93e-16 82.0
MS.gene067449.t1 MTR_2g091250 32.569 218 111 4 112 293 365 582 5.99e-15 78.6
MS.gene067449.t1 MTR_2g091250 34.010 197 68 4 133 270 337 530 3.81e-14 76.3
MS.gene067449.t1 MTR_2g091250 31.858 226 138 4 55 268 643 864 2.26e-12 70.5
MS.gene067449.t1 MTR_2g104190 49.835 303 116 5 136 429 332 607 1.51e-68 232
MS.gene067449.t1 MTR_2g104190 29.747 316 160 6 4 270 55 357 1.40e-17 86.3
MS.gene067449.t1 MTR_2g091025 37.120 493 201 11 22 447 82 532 1.74e-67 228
MS.gene067449.t1 MTR_2g091260 49.852 337 121 6 133 431 448 774 7.37e-66 229
MS.gene067449.t1 MTR_2g091260 36.306 314 143 8 20 286 78 381 9.91e-36 142
MS.gene067449.t1 MTR_2g091260 38.406 138 74 1 133 270 280 406 1.35e-13 74.3
MS.gene067449.t1 MTR_2g091260 37.748 151 91 1 133 280 336 486 8.65e-13 71.6
MS.gene067449.t1 MTR_2g010420 42.775 346 147 7 129 430 399 737 3.30e-65 225
MS.gene067449.t1 MTR_2g010420 31.122 196 111 4 99 270 278 473 1.16e-12 70.9
MS.gene067449.t1 MTR_2g010420 42.651 347 148 7 129 431 399 738 6.57e-65 226
MS.gene067449.t1 MTR_2g010420 31.122 196 111 4 99 270 278 473 1.28e-12 70.9
MS.gene067449.t1 MTR_2g091080 45.226 398 159 8 82 430 371 758 5.47e-63 219
MS.gene067449.t1 MTR_2g091080 38.148 270 124 12 27 271 29 280 3.11e-23 104
MS.gene067449.t1 MTR_2g091080 35.749 207 113 5 75 270 222 419 1.63e-17 86.3
MS.gene067449.t1 MTR_2g091290 39.192 421 207 9 57 434 324 738 1.65e-61 216
MS.gene067449.t1 MTR_2g091290 36.330 267 130 6 27 271 57 305 6.74e-26 112
MS.gene067449.t1 MTR_2g091290 33.898 177 64 3 133 267 276 441 8.46e-13 71.6
MS.gene067449.t1 MTR_3g110385 43.784 370 173 7 81 431 377 730 1.89e-61 216
MS.gene067449.t1 MTR_3g110385 44.853 136 71 1 135 270 211 342 1.22e-18 90.1
MS.gene067449.t1 MTR_3g110385 35.359 181 99 3 133 295 300 480 1.03e-14 77.8
MS.gene067449.t1 MTR_2g091370 38.402 388 164 7 129 447 372 753 2.34e-58 208
MS.gene067449.t1 MTR_2g091370 37.201 293 137 11 12 271 57 335 5.55e-24 106
MS.gene067449.t1 MTR_2g091370 27.341 267 146 6 49 267 205 471 1.36e-11 67.8
MS.gene067449.t1 MTR_2g091040 35.234 491 185 11 24 392 39 518 1.35e-55 195
MS.gene067449.t1 MTR_2g091110 39.427 454 166 10 82 430 749 1198 3.00e-55 201
MS.gene067449.t1 MTR_2g091110 37.915 211 103 5 81 270 650 853 5.99e-23 103
MS.gene067449.t1 MTR_2g091110 41.935 155 66 3 133 270 468 615 3.41e-18 89.0
MS.gene067449.t1 MTR_2g091110 32.166 314 146 11 2 262 476 775 4.67e-18 88.6
MS.gene067449.t1 MTR_2g091110 37.438 203 106 6 82 270 462 657 1.79e-15 80.5
MS.gene067449.t1 MTR_2g091110 38.415 164 89 3 115 270 365 524 7.02e-15 78.6
MS.gene067449.t1 MTR_2g091110 50.538 93 36 3 44 136 43 125 1.40e-13 74.3
MS.gene067449.t1 MTR_2g091110 39.189 148 65 3 130 270 556 685 5.60e-12 69.3
MS.gene067449.t1 MTR_2g090980 54.460 213 81 3 232 431 308 517 6.74e-54 191
MS.gene067449.t1 MTR_8g107320 54.315 197 73 4 222 417 24 204 1.52e-50 172
MS.gene067449.t1 MTR_8g106540 40.625 320 121 11 112 430 33 284 3.20e-44 158
MS.gene067449.t1 MTR_5g078500 38.346 266 119 5 24 251 40 298 2.60e-37 140
MS.gene067449.t1 MTR_2g091325 36.111 324 122 9 27 270 82 400 1.16e-34 137
MS.gene067449.t1 MTR_2g091325 51.087 184 62 5 115 270 364 547 4.23e-32 130
MS.gene067449.t1 MTR_2g091325 36.283 226 112 6 82 288 296 508 6.77e-21 96.7
MS.gene067449.t1 MTR_2g091325 38.514 148 74 3 133 270 288 428 2.63e-12 69.7
MS.gene067449.t1 MTR_2g091070 54.054 148 65 1 300 447 21 165 1.12e-33 127
MS.gene067449.t1 MTR_7g056313 35.220 318 131 8 22 283 35 333 2.06e-32 128
MS.gene067449.t1 MTR_7g056313 35.484 155 83 2 133 270 214 368 3.54e-13 71.6
MS.gene067449.t1 MTR_7g056313 37.500 168 76 4 115 257 206 369 5.22e-13 70.9
MS.gene067449.t1 MTR_2g091330 37.013 308 137 8 26 286 79 376 3.46e-28 119
MS.gene067449.t1 MTR_2g091330 39.877 163 74 3 135 273 431 593 4.86e-16 81.6
MS.gene067449.t1 MTR_2g091330 40.123 162 82 2 111 268 319 469 1.08e-12 70.9
MS.gene067449.t1 MTR_2g091330 40.171 117 66 1 112 224 467 583 1.34e-11 67.4
MS.gene067449.t1 MTR_8g099800 70.732 82 22 2 97 178 8 87 2.73e-27 105
MS.gene067449.t1 MTR_2g091010 36.066 305 146 12 2 272 51 340 2.01e-26 114
MS.gene067449.t1 MTR_2g091010 40.957 188 74 5 115 276 316 492 1.94e-19 92.4
MS.gene067449.t1 MTR_2g091010 37.200 250 112 5 81 292 373 615 2.94e-19 92.0
MS.gene067449.t1 MTR_8g467200 35.052 291 165 7 152 434 32 306 1.45e-24 107
MS.gene067449.t1 MTR_2g091280 41.989 181 60 2 135 270 531 711 1.18e-23 105
MS.gene067449.t1 MTR_2g091280 36.721 305 118 10 23 270 59 345 6.02e-22 100
MS.gene067449.t1 MTR_2g091280 41.722 151 81 2 127 270 307 457 1.72e-17 86.3
MS.gene067449.t1 MTR_2g091280 35.443 237 95 6 92 270 321 557 3.07e-16 82.4
MS.gene067449.t1 MTR_2g091280 33.488 215 91 5 115 277 407 621 7.89e-12 68.6
MS.gene067449.t1 MTR_4g084920 33.562 292 149 10 106 362 10 291 2.41e-20 92.4
MS.gene067449.t1 MTR_4g046660 47.518 141 65 3 296 434 447 580 4.60e-20 94.4
MS.gene067449.t1 MTR_2g104430 63.291 79 25 3 441 518 59 134 2.25e-19 91.7
MS.gene067449.t1 MTR_2g104460 55.814 86 27 3 441 518 16 98 2.47e-19 83.6
MS.gene067449.t1 MTR_2g104430 56.180 89 25 3 441 518 59 144 1.76e-18 89.0
MS.gene067449.t1 MTR_2g091315 33.333 282 132 9 27 270 49 312 4.08e-18 87.8
MS.gene067449.t1 MTR_2g091315 29.771 262 129 4 40 270 201 438 8.38e-13 71.2
MS.gene067449.t1 MTR_2g091360 52.174 92 44 0 133 224 65 156 7.16e-18 85.1
MS.gene067449.t1 MTR_2g091005 31.970 269 131 8 27 267 59 303 2.19e-17 85.9
MS.gene067449.t1 MTR_2g090640 41.259 143 73 1 133 275 197 328 3.74e-17 84.7
MS.gene067449.t1 MTR_2g090640 38.462 169 77 4 117 269 261 418 4.16e-13 72.0
MS.gene067449.t1 MTR_2g104400 55.056 89 26 3 441 518 18 103 3.94e-17 85.5
MS.gene067449.t1 MTR_7g056317 67.045 88 25 2 344 431 1 84 5.80e-16 74.3
MS.gene067449.t1 MTR_2g095920 52.809 89 28 3 441 518 18 103 6.61e-16 80.9
MS.gene067449.t1 MTR_2g104430 51.685 89 23 4 441 518 18 97 3.51e-14 75.5
MS.gene067449.t1 MTR_2g064120 56.164 73 31 1 52 123 133 205 6.13e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene067449.t1 AT5G27220 30.448 335 192 13 99 425 497 798 1.19e-13 74.7
MS.gene067449.t1 AT5G27220 30.448 335 192 13 99 425 497 798 1.19e-13 74.7
MS.gene067449.t1 AT5G27220 30.448 335 192 13 99 425 497 798 1.31e-13 74.3
MS.gene067449.t1 AT5G27220 30.448 335 192 13 99 425 497 798 1.31e-13 74.3

Find 83 sgRNAs with CRISPR-Local

Find 277 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTCTCAATATTTCTCTTTA+TGG 0.075175 2.4:-1014573 None:intergenic
CTAGTGCTGATTTGATTAAA+TGG 0.234024 2.4:+1018845 MS.gene067449:CDS
GTAGCAACTTCACTAGAATT+TGG 0.247308 2.4:-1018874 None:intergenic
CTTCGTTGAATATGAATAAA+AGG 0.247349 2.4:+1014435 MS.gene067449:CDS
AGAAAATACTGAAAATTCTT+TGG 0.251631 2.4:+1015669 MS.gene067449:CDS
AGATCCAGCAAAACTTGTTT+TGG 0.272394 2.4:+1015474 MS.gene067449:CDS
ACAGCTTTGTCTCCCTTCTT+AGG 0.285668 2.4:-1015526 None:intergenic
CTGCAAAGAGCTAGAAAATA+AGG 0.286190 2.4:+1014598 MS.gene067449:CDS
GAGTCAAAGCTGAATAATTT+TGG 0.290126 2.4:+1014968 MS.gene067449:CDS
CTTACACAAGATTTAATATC+TGG 0.303638 2.4:-1015601 None:intergenic
GATGGAACAAGTGAGGAATT+TGG 0.315869 2.4:+1015424 MS.gene067449:CDS
TAGAGGGATTGCATCATCTT+TGG 0.317901 2.4:+1018321 MS.gene067449:CDS
ACAATACTTGTGCGTGATTC+GGG 0.321400 2.4:-1017238 None:intergenic
CAGACTCAAGTTCCTTAACT+TGG 0.324284 2.4:-1014625 None:intergenic
AGATAGCTGTAAAGCTGTTT+AGG 0.328283 2.4:+1015800 MS.gene067449:CDS
TTCAATTTCGTACTAGTGAT+TGG 0.332218 2.4:+1017194 MS.gene067449:CDS
TCCTTTCAGAGTCCTGTGAT+TGG 0.368551 2.4:+1017167 MS.gene067449:intron
TCAAAAGAGGAGGAATTTAA+AGG 0.372635 2.4:+1014812 MS.gene067449:CDS
CTTGGAAAGCAACAATTCCT+TGG 0.374250 2.4:+1014346 MS.gene067449:CDS
CAATTCAGTATCACCATTGA+TGG 0.374340 2.4:+1015406 MS.gene067449:CDS
CTGTCAAATAACCTCTTAAC+TGG 0.388338 2.4:-1014314 None:intergenic
GACAATACTTGTGCGTGATT+CGG 0.388703 2.4:-1017239 None:intergenic
TTATCGATGGCGACGATGTC+AGG 0.391493 2.4:+1013862 None:intergenic
GAAAATTCTTTGGAGGTTCT+CGG 0.397484 2.4:+1015679 MS.gene067449:CDS
TTCCTCACTTGTTCCATCAA+TGG 0.405596 2.4:-1015419 None:intergenic
TTGTCTCCCTTCTTAGGCAG+TGG 0.411661 2.4:-1015520 None:intergenic
TTCTTAGGCAGTGGAATCGT+GGG 0.412112 2.4:-1015511 None:intergenic
TCTGAAAAGAATATACTTGA+TGG 0.418087 2.4:+1014644 MS.gene067449:CDS
CCTCTTGGTTGTGGTGTAGA+GGG 0.421601 2.4:+1018305 MS.gene067449:CDS
TTCGTACTAGTGATTGGAGT+TGG 0.431108 2.4:+1017200 MS.gene067449:CDS
GAAGGAAGAAGTAGATCAAA+AGG 0.433938 2.4:+1014174 MS.gene067449:CDS
TTGGATTTAACAGCACGAAC+TGG 0.436687 2.4:+1014130 MS.gene067449:intron
CTTTGAGATTGTCCTCAGCT+TGG 0.447230 2.4:-1014898 None:intergenic
AAATAAGGAGACCCAAGTTA+AGG 0.448359 2.4:+1014613 MS.gene067449:CDS
ATTTGACAGCAACAATTCCT+TGG 0.450325 2.4:+1014328 MS.gene067449:CDS
CAAGGAATTGTTGCTTTCCA+AGG 0.451728 2.4:-1014345 None:intergenic
ACATTTCGCGAGCCGACAAA+AGG 0.460184 2.4:+1014739 MS.gene067449:CDS
GGAATTTGAATCAAAAGAAA+AGG 0.461737 2.4:+1014760 MS.gene067449:CDS
CTACTGCACTGCCAGTTAAG+AGG 0.461854 2.4:+1014303 MS.gene067449:CDS
CACGATTCCACTGCCTAAGA+AGG 0.465950 2.4:+1015513 MS.gene067449:CDS
TCCTCTTGGTTGTGGTGTAG+AGG 0.467927 2.4:+1018304 MS.gene067449:CDS
TCAGATTGAAGTACAAATCA+AGG 0.469530 2.4:+1014940 MS.gene067449:CDS
CTGATTCAAAGTTCTTCACT+AGG 0.474701 2.4:-1014709 None:intergenic
AAATTATTCAGCTTTGACTC+AGG 0.479176 2.4:-1014965 None:intergenic
GTAAAGCTGTTTAGGACCCT+GGG 0.479502 2.4:+1015808 MS.gene067449:CDS
AAATACTGAAAATTCTTTGG+AGG 0.482682 2.4:+1015672 MS.gene067449:CDS
TGTAAAGCTGTTTAGGACCC+TGG 0.484740 2.4:+1015807 MS.gene067449:CDS
AATCATTTGAGGAATGCAAC+GGG 0.489095 2.4:+1014519 MS.gene067449:CDS
AGTGTTTGAAGCAAAGGAAG+AGG 0.504885 2.4:+1014844 MS.gene067449:CDS
GAATTATCAGCTGATTTGCC+TGG 0.507013 2.4:-1014458 None:intergenic
GGAATTTGAAAGAAGAGTGA+AGG 0.507055 2.4:+1014781 MS.gene067449:CDS
AGATGTCTTCCTCTTGGTTG+TGG 0.512724 2.4:+1018296 MS.gene067449:CDS
GTTTACAGCTGCAACAAGTC+AGG 0.515862 2.4:+1018373 MS.gene067449:CDS
TTGAATATGAATAAAAGGCC+AGG 0.518437 2.4:+1014440 MS.gene067449:CDS
AGACTCAAGTTCCTTAACTT+GGG 0.522775 2.4:-1014624 None:intergenic
CACGAACTGGACAGCCAAGT+GGG 0.524603 2.4:+1014143 MS.gene067449:CDS
CTTCTTAGGCAGTGGAATCG+TGG 0.525924 2.4:-1015512 None:intergenic
ACATCTTCTCTTCAAACCGC+AGG 0.530472 2.4:-1018352 None:intergenic
GCAACTTCACTAGAATTTGG+AGG 0.556939 2.4:-1018871 None:intergenic
AAATAGAAGAGTGGCGATTG+TGG 0.559419 2.4:+1014549 MS.gene067449:CDS
GAAGGAGTTCCAGTCAAAAG+AGG 0.567276 2.4:+1014799 MS.gene067449:CDS
AGTGAAAGTGTTTGAAGCAA+AGG 0.574401 2.4:+1014838 MS.gene067449:CDS
TTTCTTAACAGAAAATTCCA+AGG 0.575654 2.4:-1014363 None:intergenic
AAATCATTTGAGGAATGCAA+CGG 0.576495 2.4:+1014518 MS.gene067449:CDS
CATCTTCTCTTCAAACCGCA+GGG 0.594174 2.4:-1018351 None:intergenic
ACGATTCCACTGCCTAAGAA+GGG 0.594525 2.4:+1015514 MS.gene067449:CDS
ATATGCAGATACATCTAACA+TGG 0.600498 2.4:+1015378 MS.gene067449:intron
AAATTGAACTCTCCAATCAC+AGG 0.611839 2.4:-1017179 None:intergenic
GGAGTTCCAGTCAAAAGAGG+AGG 0.625446 2.4:+1014802 MS.gene067449:CDS
ACGAACTGGACAGCCAAGTG+GGG 0.626248 2.4:+1014144 MS.gene067449:CDS
GACTTTATGTACAAAACCCA+GGG 0.629177 2.4:-1015824 None:intergenic
GCAAAGGAAGAGGAATTCGA+AGG 0.634363 2.4:+1014854 MS.gene067449:CDS
CACCATTGATGGAACAAGTG+AGG 0.634662 2.4:+1015417 MS.gene067449:CDS
TGCAAGTTCTTTCCTCAGCG+AGG 0.638740 2.4:-1014486 None:intergenic
AGACTTTATGTACAAAACCC+AGG 0.639555 2.4:-1015825 None:intergenic
GGAATCAACAAATAGAAGAG+TGG 0.642926 2.4:+1014540 MS.gene067449:CDS
GCACGAACTGGACAGCCAAG+TGG 0.645283 2.4:+1014142 MS.gene067449:intron
ACTAGTGATTGGAGTTGGAG+AGG 0.652499 2.4:+1017205 MS.gene067449:CDS
CCCTCTACACCACAACCAAG+AGG 0.653097 2.4:-1018305 None:intergenic
GCAATTTGAAAACCAAGCTG+AGG 0.662165 2.4:+1014886 MS.gene067449:CDS
CGAACTGGACAGCCAAGTGG+GGG 0.663711 2.4:+1014145 MS.gene067449:CDS
TCTTAGGCAGTGGAATCGTG+GGG 0.670339 2.4:-1015510 None:intergenic
ATCTTTGGAAGATTGCCCTG+CGG 0.716047 2.4:+1018336 MS.gene067449:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTAAAAATTTTAAAAAAATT+AGG - chr2.4:1018796-1018815 None:intergenic 0.0%
!! AACATATATATTATGATAAA+CGG - chr2.4:1014101-1014120 None:intergenic 10.0%
!! AGAAAAATATATGTATGATA+AGG + chr2.4:1017425-1017444 MS.gene067449:intron 15.0%
!! ATACGAATATAACATTTAAA+AGG - chr2.4:1017128-1017147 None:intergenic 15.0%
!! ATTAATAAGATATTAGATCT+AGG + chr2.4:1016251-1016270 MS.gene067449:intron 15.0%
!! TATATATGTTATAGATTCTT+TGG + chr2.4:1014111-1014130 MS.gene067449:intron 15.0%
!! TTAAAAAAATTAGGATGATA+GGG - chr2.4:1018787-1018806 None:intergenic 15.0%
!! TTAACAAAAAACTAACAAAT+TGG - chr2.4:1016468-1016487 None:intergenic 15.0%
!! TTTAAAAAAATTAGGATGAT+AGG - chr2.4:1018788-1018807 None:intergenic 15.0%
!!! CTTTTGTATTTTAATTTTCA+AGG + chr2.4:1016694-1016713 MS.gene067449:intron 15.0%
!!! TTTCTTTTCTTATAAAAAAG+AGG - chr2.4:1017410-1017429 None:intergenic 15.0%
!! AAAGAAATAAGAGCTAATAT+GGG + chr2.4:1016858-1016877 MS.gene067449:intron 20.0%
!! AACATTTAAAAGGTAATTAG+TGG - chr2.4:1017118-1017137 None:intergenic 20.0%
!! AATGAAATAAGATGATTATC+AGG - chr2.4:1013970-1013989 None:intergenic 20.0%
!! AGAAAATACTGAAAATTCTT+TGG + chr2.4:1015669-1015688 MS.gene067449:CDS 20.0%
!! AGAAATTTGATTCAGTTAAT+TGG + chr2.4:1016575-1016594 MS.gene067449:intron 20.0%
!! ATTGTTGAAAAAATCATTTG+AGG + chr2.4:1014508-1014527 MS.gene067449:CDS 20.0%
!! ATTTCTTAACAAAATTTGCA+AGG - chr2.4:1016547-1016566 None:intergenic 20.0%
!! TAAATTCTGTAGTTAAATGA+TGG + chr2.4:1014250-1014269 MS.gene067449:intron 20.0%
!! TATTAATCTTAGTATCTTTG+TGG - chr2.4:1016238-1016257 None:intergenic 20.0%
!! TTAGATACAAAATTGCAATA+TGG - chr2.4:1015940-1015959 None:intergenic 20.0%
!! TTGTAATCATACTGAAATTA+GGG - chr2.4:1018489-1018508 None:intergenic 20.0%
!!! AAAAACTTGTTCATTTTTGT+CGG - chr2.4:1016601-1016620 None:intergenic 20.0%
!!! ACGAATCAATTTTCAAATTT+CGG + chr2.4:1016995-1017014 MS.gene067449:intron 20.0%
!!! ATAATAAATTGATAATCACG+AGG - chr2.4:1018417-1018436 None:intergenic 20.0%
!!! ATTTTCTGTTAAGAAATCAA+AGG + chr2.4:1014370-1014389 MS.gene067449:CDS 20.0%
!!! TAAAACTAAAGCTTACATTT+TGG - chr2.4:1017266-1017285 None:intergenic 20.0%
!!! TATCTCTTTCATTTTCTAAA+TGG + chr2.4:1016417-1016436 MS.gene067449:intron 20.0%
!!! TCTCAATTTCTTATGTTTTA+TGG + chr2.4:1017948-1017967 MS.gene067449:intron 20.0%
!!! TCTTTTATGTTGTTTTAGAT+TGG + chr2.4:1015965-1015984 MS.gene067449:intron 20.0%
!!! TGTAAGCTTTAGTTTTAATA+CGG + chr2.4:1017269-1017288 MS.gene067449:intron 20.0%
!!! TTCTTATGTTTTATGGAAAA+TGG + chr2.4:1017955-1017974 MS.gene067449:intron 20.0%
! AAATACTGAAAATTCTTTGG+AGG + chr2.4:1015672-1015691 MS.gene067449:CDS 25.0%
! AAATGAGCTTGAATCAAAAA+AGG + chr2.4:1014673-1014692 MS.gene067449:CDS 25.0%
! AACAATTGACAAAACTGTTT+GGG - chr2.4:1016324-1016343 None:intergenic 25.0%
! AAGGATAAACATTCGATAAA+TGG - chr2.4:1014027-1014046 None:intergenic 25.0%
! AATCAGGATAGCATATAATA+GGG + chr2.4:1013893-1013912 MS.gene067449:intron 25.0%
! AATGAGCTTGAATCAAAAAA+GGG + chr2.4:1014674-1014693 MS.gene067449:CDS 25.0%
! AATTTCAGTATGATTACAAC+TGG + chr2.4:1018490-1018509 MS.gene067449:intron 25.0%
! ACATAAGCAACAAAAATTGA+AGG - chr2.4:1015322-1015341 None:intergenic 25.0%
! ATAGAAACTTAGTGAATCAT+TGG - chr2.4:1015221-1015240 None:intergenic 25.0%
! ATGATAAGTAAAAACTATGC+AGG + chr2.4:1016208-1016227 MS.gene067449:intron 25.0%
! CAAAGAAATAAGAGCTAATA+TGG + chr2.4:1016857-1016876 MS.gene067449:intron 25.0%
! CTTACACAAGATTTAATATC+TGG - chr2.4:1015604-1015623 None:intergenic 25.0%
! CTTATTCAATTTAGACCTTT+AGG + chr2.4:1017763-1017782 MS.gene067449:intron 25.0%
! CTTCGTTGAATATGAATAAA+AGG + chr2.4:1014435-1014454 MS.gene067449:CDS 25.0%
! CTTCTCAATATTTCTCTTTA+TGG - chr2.4:1014576-1014595 None:intergenic 25.0%
! GGAATTTGAATCAAAAGAAA+AGG + chr2.4:1014760-1014779 MS.gene067449:CDS 25.0%
! GGTCATATTCTATTATATGA+GGG + chr2.4:1018185-1018204 MS.gene067449:intron 25.0%
! GTTGTAATCATACTGAAATT+AGG - chr2.4:1018490-1018509 None:intergenic 25.0%
! TAACAATTGACAAAACTGTT+TGG - chr2.4:1016325-1016344 None:intergenic 25.0%
! TACGATGAAGAAAAAGAATT+TGG + chr2.4:1015028-1015047 MS.gene067449:CDS 25.0%
! TATGGAAAATGGATGTTTAT+TGG + chr2.4:1017966-1017985 MS.gene067449:intron 25.0%
! TCTGAAAAGAATATACTTGA+TGG + chr2.4:1014644-1014663 MS.gene067449:CDS 25.0%
! TCTTGATATGTTATTGTCAT+TGG - chr2.4:1018215-1018234 None:intergenic 25.0%
! TGTAGAACATATTATTTGTG+TGG + chr2.4:1016121-1016140 MS.gene067449:intron 25.0%
! TTAAGATGGCAAAAAATTGA+AGG - chr2.4:1014046-1014065 None:intergenic 25.0%
! TTATAGCCAAAACTACAAAT+AGG - chr2.4:1015176-1015195 None:intergenic 25.0%
! TTATCAGGATTTAAAGAAAC+AGG - chr2.4:1013955-1013974 None:intergenic 25.0%
! TTTCTTAACAGAAAATTCCA+AGG - chr2.4:1014366-1014385 None:intergenic 25.0%
!! AATAGTCCTATTTGTAGTTT+TGG + chr2.4:1015167-1015186 MS.gene067449:intron 25.0%
!! ATATATACTATGAAAGCATG+TGG - chr2.4:1015278-1015297 None:intergenic 25.0%
!! CATTTCAACAACAACTTTTA+TGG + chr2.4:1015088-1015107 MS.gene067449:intron 25.0%
!! CATTTTCACATTCAACTTAA+AGG - chr2.4:1016786-1016805 None:intergenic 25.0%
!! CTTTATTTCTTCAGTGAATA+AGG + chr2.4:1014216-1014235 MS.gene067449:intron 25.0%
!! CTTTTATTCATATTCAACGA+AGG - chr2.4:1014437-1014456 None:intergenic 25.0%
!! TAAGAGAAAATTGACTTCTT+GGG + chr2.4:1016343-1016362 MS.gene067449:intron 25.0%
!! TTAAGAGAAAATTGACTTCT+TGG + chr2.4:1016342-1016361 MS.gene067449:intron 25.0%
!! TTGATTCAAATTCCTTTTGT+CGG - chr2.4:1014754-1014773 None:intergenic 25.0%
!! TTTTCAAATTTCGGTTAAGT+TGG + chr2.4:1017004-1017023 MS.gene067449:intron 25.0%
!!! CATCTAAAAGTATTTGACTT+TGG - chr2.4:1016191-1016210 None:intergenic 25.0%
!!! CATTTAAACTTCTAGAATGT+AGG - chr2.4:1016506-1016525 None:intergenic 25.0%
!!! GATTGGCTTTAAATTTTAGT+TGG + chr2.4:1015982-1016001 MS.gene067449:intron 25.0%
AAATCATTTGAGGAATGCAA+CGG + chr2.4:1014518-1014537 MS.gene067449:CDS 30.0%
AACATTAGCTATTAGGAGTT+AGG + chr2.4:1018690-1018709 MS.gene067449:intron 30.0%
AATTTACCAACGAATCAAGT+TGG + chr2.4:1018576-1018595 MS.gene067449:intron 30.0%
ACAATTGACAAAACTGTTTG+GGG - chr2.4:1016323-1016342 None:intergenic 30.0%
ATATGCAGATACATCTAACA+TGG + chr2.4:1015378-1015397 MS.gene067449:intron 30.0%
ATTATGATAAACGGTACAAC+AGG - chr2.4:1014092-1014111 None:intergenic 30.0%
ATTGATATGATTCCATAGAC+TGG + chr2.4:1017362-1017381 MS.gene067449:intron 30.0%
CAAAAATTGAAGGTGACAAT+AGG - chr2.4:1015312-1015331 None:intergenic 30.0%
CAAAATTGAACTCATGCAAT+TGG + chr2.4:1016284-1016303 MS.gene067449:intron 30.0%
CAATCAGGATAGCATATAAT+AGG + chr2.4:1013892-1013911 MS.gene067449:intron 30.0%
CGGTCATATTCTATTATATG+AGG + chr2.4:1018184-1018203 MS.gene067449:intron 30.0%
GATATTAGATCTAGGTAACT+TGG + chr2.4:1016259-1016278 MS.gene067449:intron 30.0%
GCTACAAAAATGAAAAACAG+TGG - chr2.4:1018261-1018280 None:intergenic 30.0%
GTCTTTCAACATTAGCTATT+AGG + chr2.4:1018683-1018702 MS.gene067449:intron 30.0%
GTTGCCAAGAAAATTTCTTA+AGG + chr2.4:1018027-1018046 MS.gene067449:intron 30.0%
TAATGCTTCTGTTTAGAAGA+TGG + chr2.4:1014277-1014296 MS.gene067449:intron 30.0%
TATGTGTGTGATATAGAAAC+TGG - chr2.4:1015148-1015167 None:intergenic 30.0%
TATTGTTGAAACCTGCTAAT+AGG + chr2.4:1016635-1016654 MS.gene067449:intron 30.0%
TCAAAAAAGGGTGAATTTGA+TGG + chr2.4:1014686-1014705 MS.gene067449:CDS 30.0%
TCAAAAGAGGAGGAATTTAA+AGG + chr2.4:1014812-1014831 MS.gene067449:CDS 30.0%
TCAGATTGAAGTACAAATCA+AGG + chr2.4:1014940-1014959 MS.gene067449:CDS 30.0%
TCTTAACAAAATTTGCAAGG+TGG - chr2.4:1016544-1016563 None:intergenic 30.0%
TGTACAAATGTTCCTGAAAT+AGG + chr2.4:1016145-1016164 MS.gene067449:intron 30.0%
TTAAAAAGATGTCTTCCTCT+TGG + chr2.4:1018290-1018309 MS.gene067449:CDS 30.0%
TTATGATAAACGGTACAACA+GGG - chr2.4:1014091-1014110 None:intergenic 30.0%
TTCAATTTCGTACTAGTGAT+TGG + chr2.4:1017194-1017213 MS.gene067449:CDS 30.0%
TTGAATATGAATAAAAGGCC+AGG + chr2.4:1014440-1014459 MS.gene067449:CDS 30.0%
! AAATTATTCAGCTTTGACTC+AGG - chr2.4:1014968-1014987 None:intergenic 30.0%
! ATATCCAAAACAAGTTTTGC+TGG - chr2.4:1015481-1015500 None:intergenic 30.0%
! CAATCTGATTCTCTTTTAAC+TGG - chr2.4:1014928-1014947 None:intergenic 30.0%
! GAAATTTTCTTGGCAACATT+AGG - chr2.4:1018024-1018043 None:intergenic 30.0%
! GAGTCAAAGCTGAATAATTT+TGG + chr2.4:1014968-1014987 MS.gene067449:CDS 30.0%
! GCAACATTTCATTAGGTTTT+CGG + chr2.4:1017384-1017403 MS.gene067449:intron 30.0%
! TAGCTCTTATTTCTTTGAGA+TGG - chr2.4:1016854-1016873 None:intergenic 30.0%
! TCAAAGCTGAATAATTTTGG+TGG + chr2.4:1014971-1014990 MS.gene067449:CDS 30.0%
! TCCATTCTACTTCCTATTTT+TGG + chr2.4:1018109-1018128 MS.gene067449:intron 30.0%
! TCCTCCTTAAGAAATTTTCT+TGG - chr2.4:1018034-1018053 None:intergenic 30.0%
! TTGATTCGTTGGTAAATTGT+TGG - chr2.4:1018574-1018593 None:intergenic 30.0%
! TTTGCCATCTTAATGCTTTT+GGG + chr2.4:1014053-1014072 MS.gene067449:intron 30.0%
! TTTTGCCATCTTAATGCTTT+TGG + chr2.4:1014052-1014071 MS.gene067449:intron 30.0%
!! CTAGTGCTGATTTGATTAAA+TGG + chr2.4:1018845-1018864 MS.gene067449:CDS 30.0%
!! TAATTTTGGTGGACAACTAA+AGG + chr2.4:1014982-1015001 MS.gene067449:CDS 30.0%
!! TATTCCCAAAAGCATTAAGA+TGG - chr2.4:1014060-1014079 None:intergenic 30.0%
!! TGTTTTTCATTTTTGTAGCG+TGG + chr2.4:1018262-1018281 MS.gene067449:intron 30.0%
!! TTAATGCTTTTGGGAATATG+CGG + chr2.4:1014062-1014081 MS.gene067449:intron 30.0%
!!! ATTCTACTTCCTATTTTTGG+CGG + chr2.4:1018112-1018131 MS.gene067449:intron 30.0%
!!! CTCTTATTTTATCCTCACTT+TGG - chr2.4:1017055-1017074 None:intergenic 30.0%
!!! CTGATGATTTTGTCGATTTA+TGG + chr2.4:1015706-1015725 MS.gene067449:CDS 30.0%
AAATAAGGAGACCCAAGTTA+AGG + chr2.4:1014613-1014632 MS.gene067449:CDS 35.0%
AAATTGAACTCTCCAATCAC+AGG - chr2.4:1017182-1017201 None:intergenic 35.0%
AACAAGAGTTGTCCTATTTC+AGG - chr2.4:1016160-1016179 None:intergenic 35.0%
AATCATTTGAGGAATGCAAC+GGG + chr2.4:1014519-1014538 MS.gene067449:CDS 35.0%
AATGAAATGTTGCCAGTCTA+TGG - chr2.4:1017377-1017396 None:intergenic 35.0%
ACTTCTTGGGTGTTAATGTT+TGG + chr2.4:1016356-1016375 MS.gene067449:intron 35.0%
AGACTCAAGTTCCTTAACTT+GGG - chr2.4:1014627-1014646 None:intergenic 35.0%
AGACTTTATGTACAAAACCC+AGG - chr2.4:1015828-1015847 None:intergenic 35.0%
AGATAGCTGTAAAGCTGTTT+AGG + chr2.4:1015800-1015819 MS.gene067449:CDS 35.0%
AGGTTAGCATTTAAAAGCCT+TGG + chr2.4:1018615-1018634 MS.gene067449:intron 35.0%
AGTAGTCAAATCCTATTAGC+AGG - chr2.4:1016649-1016668 None:intergenic 35.0%
AGTCCATAATCCACATTCTA+CGG - chr2.4:1017736-1017755 None:intergenic 35.0%
AGTGCAAAAATCAAGGTTCA+CGG - chr2.4:1013929-1013948 None:intergenic 35.0%
ATAAACACCAGTTTCATGTG+TGG + chr2.4:1017697-1017716 MS.gene067449:intron 35.0%
ATGCATACAAAGATAGCACA+TGG - chr2.4:1017824-1017843 None:intergenic 35.0%
ATTTGACAGCAACAATTCCT+TGG + chr2.4:1014328-1014347 MS.gene067449:CDS 35.0%
CAATTCAGTATCACCATTGA+TGG + chr2.4:1015406-1015425 MS.gene067449:CDS 35.0%
CAGGATAAGTGCAAAAATCA+AGG - chr2.4:1013936-1013955 None:intergenic 35.0%
CTGATTCAAAGTTCTTCACT+AGG - chr2.4:1014712-1014731 None:intergenic 35.0%
CTGCAAAGAGCTAGAAAATA+AGG + chr2.4:1014598-1014617 MS.gene067449:CDS 35.0%
CTGTCAAATAACCTCTTAAC+TGG - chr2.4:1014317-1014336 None:intergenic 35.0%
GAAGGAAGAAGTAGATCAAA+AGG + chr2.4:1014174-1014193 MS.gene067449:CDS 35.0%
GACTTCGTAGTCATTTCATA+TGG + chr2.4:1017591-1017610 MS.gene067449:intron 35.0%
GACTTTATGTACAAAACCCA+GGG - chr2.4:1015827-1015846 None:intergenic 35.0%
GATAGGGATAATGATCATGT+AGG - chr2.4:1018771-1018790 None:intergenic 35.0%
GCACATGGAAAACATAAACT+TGG - chr2.4:1017809-1017828 None:intergenic 35.0%
GCCAAAAATAGGAAGTAGAA+TGG - chr2.4:1018113-1018132 None:intergenic 35.0%
GCCAAGAAAATTTCTTAAGG+AGG + chr2.4:1018030-1018049 MS.gene067449:intron 35.0%
GGAATCAACAAATAGAAGAG+TGG + chr2.4:1014540-1014559 MS.gene067449:CDS 35.0%
GGAATTTGAAAGAAGAGTGA+AGG + chr2.4:1014781-1014800 MS.gene067449:CDS 35.0%
GTAGCAACTTCACTAGAATT+TGG - chr2.4:1018877-1018896 None:intergenic 35.0%
GTATCATATTCGAAGTCTGA+AGG - chr2.4:1017647-1017666 None:intergenic 35.0%
TAAACACCAGTTTCATGTGT+GGG + chr2.4:1017698-1017717 MS.gene067449:intron 35.0%
TAGACTGGCAACATTTCATT+AGG + chr2.4:1017377-1017396 MS.gene067449:intron 35.0%
TAGGATTTGACTACTAATGC+TGG + chr2.4:1016654-1016673 MS.gene067449:intron 35.0%
TAGTAAGTTGCTTCAAACGA+TGG + chr2.4:1018521-1018540 MS.gene067449:intron 35.0%
TCAACTGATGTTGTAATCGA+TGG - chr2.4:1016937-1016956 None:intergenic 35.0%
TCTTATCTTGCATTTGCAAG+AGG + chr2.4:1017546-1017565 MS.gene067449:intron 35.0%
TTTAGACCTTTAGGTCTTGA+AGG + chr2.4:1017772-1017791 MS.gene067449:intron 35.0%
! AAGGCTTTTAAATGCTAACC+TGG - chr2.4:1018616-1018635 None:intergenic 35.0%
! ACTCTGAAAGGAAGGTATAT+AGG - chr2.4:1017159-1017178 None:intergenic 35.0%
! ATAATTCATTTTCCTCGCTG+AGG + chr2.4:1014474-1014493 MS.gene067449:CDS 35.0%
! GAAAATTCTTTGGAGGTTCT+CGG + chr2.4:1015679-1015698 MS.gene067449:CDS 35.0%
! TAAATTCCTCCTCTTTTGAC+TGG - chr2.4:1014811-1014830 None:intergenic 35.0%
!! AGATCCAGCAAAACTTGTTT+TGG + chr2.4:1015474-1015493 MS.gene067449:CDS 35.0%
!! AGTGAAAGTGTTTGAAGCAA+AGG + chr2.4:1014838-1014857 MS.gene067449:CDS 35.0%
!! ATGTCAGGTTAGTTTCAATC+AGG + chr2.4:1013877-1013896 MS.gene067449:intron 35.0%
!! GCTAATATGGGTATTGAGAT+TGG + chr2.4:1016870-1016889 MS.gene067449:intron 35.0%
!! GGTTTTGTACATAAAGTCTC+TGG + chr2.4:1015829-1015848 MS.gene067449:CDS 35.0%
!! GTTTTTCTAGCAGATAGATG+CGG - chr2.4:1015567-1015586 None:intergenic 35.0%
!! TTTGAGATGGATTGTAAGAG+TGG - chr2.4:1016841-1016860 None:intergenic 35.0%
!!! ATGAGTTTTGAACAAGAACC+TGG + chr2.4:1017873-1017892 MS.gene067449:intron 35.0%
!!! GCAGTTTTAGCTTTTCAGTT+TGG + chr2.4:1017074-1017093 MS.gene067449:intron 35.0%
!!! GTTTTTTGCATGCTGTTTCA+GGG + chr2.4:1017896-1017915 MS.gene067449:intron 35.0%
!!! TGAGTTTTGAACAAGAACCT+GGG + chr2.4:1017874-1017893 MS.gene067449:intron 35.0%
!!! TTCTACTTCCTATTTTTGGC+GGG + chr2.4:1018113-1018132 MS.gene067449:intron 35.0%
AAACAGCATGCAAAAAACCC+AGG - chr2.4:1017894-1017913 None:intergenic 40.0%
AAATAGAAGAGTGGCGATTG+TGG + chr2.4:1014549-1014568 MS.gene067449:CDS 40.0%
AACTGAGAGTCAGATACTCT+CGG - chr2.4:1018656-1018675 None:intergenic 40.0%
AAGAACTCGCTAAAGTCATC+TGG - chr2.4:1018155-1018174 None:intergenic 40.0%
ACAATACTTGTGCGTGATTC+GGG - chr2.4:1017241-1017260 None:intergenic 40.0%
AGCATTTAAAAGCCTTGGCA+TGG + chr2.4:1018620-1018639 MS.gene067449:intron 40.0%
ATGAAATGACTACGAAGTCG+AGG - chr2.4:1017590-1017609 None:intergenic 40.0%
CAGACTCAAGTTCCTTAACT+TGG - chr2.4:1014628-1014647 None:intergenic 40.0%
CTTGGAAAGCAACAATTCCT+TGG + chr2.4:1014346-1014365 MS.gene067449:CDS 40.0%
GACAATACTTGTGCGTGATT+CGG - chr2.4:1017242-1017261 None:intergenic 40.0%
GATGGAACAAGTGAGGAATT+TGG + chr2.4:1015424-1015443 MS.gene067449:CDS 40.0%
GCAACTTCACTAGAATTTGG+AGG - chr2.4:1018874-1018893 None:intergenic 40.0%
GCAATTTGAAAACCAAGCTG+AGG + chr2.4:1014886-1014905 MS.gene067449:CDS 40.0%
GTCCATAATCCACATTCTAC+GGG - chr2.4:1017735-1017754 None:intergenic 40.0%
GTGAGTCTTGACACAACAAA+TGG - chr2.4:1017625-1017644 None:intergenic 40.0%
GTGCTATCTTTGTATGCATG+AGG + chr2.4:1017825-1017844 MS.gene067449:intron 40.0%
GTTATCTGTACTAACGCACA+TGG + chr2.4:1018438-1018457 MS.gene067449:intron 40.0%
TAAATGCTAACCTGGATCAG+AGG - chr2.4:1018608-1018627 None:intergenic 40.0%
TAGAGGGATTGCATCATCTT+TGG + chr2.4:1018321-1018340 MS.gene067449:CDS 40.0%
TCATTATCCCCGCCAAAAAT+AGG - chr2.4:1018124-1018143 None:intergenic 40.0%
TCCATAATCCACATTCTACG+GGG - chr2.4:1017734-1017753 None:intergenic 40.0%
TGTATGATAAGGCTCATGCA+CGG + chr2.4:1017436-1017455 MS.gene067449:intron 40.0%
TTCCTCACTTGTTCCATCAA+TGG - chr2.4:1015422-1015441 None:intergenic 40.0%
TTCGTACTAGTGATTGGAGT+TGG + chr2.4:1017200-1017219 MS.gene067449:CDS 40.0%
TTGGATTTAACAGCACGAAC+TGG + chr2.4:1014130-1014149 MS.gene067449:intron 40.0%
TTGGTAAATTGTTGGCCACA+GGG - chr2.4:1018566-1018585 None:intergenic 40.0%
! AGTGTTTGAAGCAAAGGAAG+AGG + chr2.4:1014844-1014863 MS.gene067449:CDS 40.0%
! GGAATACTTTTACCATGCCA+AGG - chr2.4:1018635-1018654 None:intergenic 40.0%
! TAGCTTTTCTCTCCAAAGTG+AGG + chr2.4:1017040-1017059 MS.gene067449:intron 40.0%
!! CAAGGAATTGTTGCTTTCCA+AGG - chr2.4:1014348-1014367 None:intergenic 40.0%
!! GAATTATCAGCTGATTTGCC+TGG - chr2.4:1014461-1014480 None:intergenic 40.0%
!!! ACTGGACTAGCTTTTCAACT+TGG - chr2.4:1015130-1015149 None:intergenic 40.0%
!!! GGTTTTTTGCATGCTGTTTC+AGG + chr2.4:1017895-1017914 MS.gene067449:intron 40.0%
!!! TCTACTTCCTATTTTTGGCG+GGG + chr2.4:1018114-1018133 MS.gene067449:intron 40.0%
ACAATGCCCACACATGAAAC+TGG - chr2.4:1017707-1017726 None:intergenic 45.0%
ACATCTTCTCTTCAAACCGC+AGG - chr2.4:1018355-1018374 None:intergenic 45.0%
ACGATTCCACTGCCTAAGAA+GGG + chr2.4:1015514-1015533 MS.gene067449:CDS 45.0%
ACTAGTGATTGGAGTTGGAG+AGG + chr2.4:1017205-1017224 MS.gene067449:CDS 45.0%
AGACCTTTAGGTCTTGAAGG+AGG + chr2.4:1017775-1017794 MS.gene067449:intron 45.0%
AGATGTCTTCCTCTTGGTTG+TGG + chr2.4:1018296-1018315 MS.gene067449:CDS 45.0%
AGCGAGTTCTTCTTGCATGT+CGG + chr2.4:1018164-1018183 MS.gene067449:intron 45.0%
AGTAGAATGGACGTCAGACA+TGG - chr2.4:1018100-1018119 None:intergenic 45.0%
CACCATTGATGGAACAAGTG+AGG + chr2.4:1015417-1015436 MS.gene067449:CDS 45.0%
CATCTTCTCTTCAAACCGCA+GGG - chr2.4:1018354-1018373 None:intergenic 45.0%
CGAAGTCGAGGTTTGATTAG+TGG - chr2.4:1017578-1017597 None:intergenic 45.0%
GAAGGAGTTCCAGTCAAAAG+AGG + chr2.4:1014799-1014818 MS.gene067449:CDS 45.0%
GCAAAGGAAGAGGAATTCGA+AGG + chr2.4:1014854-1014873 MS.gene067449:CDS 45.0%
GTACTATAAAGCTCCCCTCA+TGG + chr2.4:1017485-1017504 MS.gene067449:intron 45.0%
GTTTACAGCTGCAACAAGTC+AGG + chr2.4:1018373-1018392 MS.gene067449:CDS 45.0%
TAGATTCACAACAGAGCTCC+CGG - chr2.4:1017517-1017536 None:intergenic 45.0%
TCCAATCACAGGACTCTGAA+AGG - chr2.4:1017171-1017190 None:intergenic 45.0%
TCCTTTCAGAGTCCTGTGAT+TGG + chr2.4:1017167-1017186 MS.gene067449:intron 45.0%
TCTCCTCCTTCAAGACCTAA+AGG - chr2.4:1017781-1017800 None:intergenic 45.0%
TTCAAACGATGGCTAGACAC+CGG + chr2.4:1018532-1018551 MS.gene067449:intron 45.0%
TTCTTAGGCAGTGGAATCGT+GGG - chr2.4:1015514-1015533 None:intergenic 45.0%
TTGTATGCATGAGGCGTGTT+TGG + chr2.4:1017834-1017853 MS.gene067449:intron 45.0%
! ACAGCTTTGTCTCCCTTCTT+AGG - chr2.4:1015529-1015548 None:intergenic 45.0%
! ATCACAGGACTCTGAAAGGA+AGG - chr2.4:1017167-1017186 None:intergenic 45.0%
! ATCTTTGGAAGATTGCCCTG+CGG + chr2.4:1018336-1018355 MS.gene067449:CDS 45.0%
! CTGTTTCAGGGTTGTGGTTT+TGG + chr2.4:1017908-1017927 MS.gene067449:intron 45.0%
! GTAAAGCTGTTTAGGACCCT+GGG + chr2.4:1015808-1015827 MS.gene067449:CDS 45.0%
! GTTGGTAAATTGTTGGCCAC+AGG - chr2.4:1018567-1018586 None:intergenic 45.0%
! TCCCCGTAGAATGTGGATTA+TGG + chr2.4:1017730-1017749 MS.gene067449:intron 45.0%
! TGTAAAGCTGTTTAGGACCC+TGG + chr2.4:1015807-1015826 MS.gene067449:CDS 45.0%
!! CTTTGAGATTGTCCTCAGCT+TGG - chr2.4:1014901-1014920 None:intergenic 45.0%
ACATTTCGCGAGCCGACAAA+AGG + chr2.4:1014739-1014758 MS.gene067449:CDS 50.0%
ATGCATGAGGCGTGTTTGGT+TGG + chr2.4:1017838-1017857 MS.gene067449:intron 50.0%
CACGATTCCACTGCCTAAGA+AGG + chr2.4:1015513-1015532 MS.gene067449:CDS 50.0%
CCTCTTGGTTGTGGTGTAGA+GGG + chr2.4:1018305-1018324 MS.gene067449:CDS 50.0%
CTAACCTGGATCAGAGGCTA+GGG - chr2.4:1018602-1018621 None:intergenic 50.0%
CTACTGCACTGCCAGTTAAG+AGG + chr2.4:1014303-1014322 MS.gene067449:CDS 50.0%
CTTCTTAGGCAGTGGAATCG+TGG - chr2.4:1015515-1015534 None:intergenic 50.0%
GGAGTTCCAGTCAAAAGAGG+AGG + chr2.4:1014802-1014821 MS.gene067449:CDS 50.0%
TCAAACGATGGCTAGACACC+GGG + chr2.4:1018533-1018552 MS.gene067449:intron 50.0%
TCCTCTTGGTTGTGGTGTAG+AGG + chr2.4:1018304-1018323 MS.gene067449:CDS 50.0%
TCTTAGGCAGTGGAATCGTG+GGG - chr2.4:1015513-1015532 None:intergenic 50.0%
TGCAAGTTCTTTCCTCAGCG+AGG - chr2.4:1014489-1014508 None:intergenic 50.0%
TTGTCTCCCTTCTTAGGCAG+TGG - chr2.4:1015523-1015542 None:intergenic 50.0%
TTGTGTGTCCCCGTAGAATG+TGG + chr2.4:1017723-1017742 MS.gene067449:intron 50.0%
! CTAGGGCCAACTTGATTCGT+TGG - chr2.4:1018585-1018604 None:intergenic 50.0%
!! TGCATGCTGTTTCAGGGTTG+TGG + chr2.4:1017902-1017921 MS.gene067449:intron 50.0%
AATTGTTGGCCACAGGGTCC+TGG - chr2.4:1018560-1018579 None:intergenic 55.0%
ACGAACTGGACAGCCAAGTG+GGG + chr2.4:1014144-1014163 MS.gene067449:CDS 55.0%
CACGAACTGGACAGCCAAGT+GGG + chr2.4:1014143-1014162 MS.gene067449:CDS 55.0%
CCCTCTACACCACAACCAAG+AGG - chr2.4:1018308-1018327 None:intergenic 55.0%
GCTAACCTGGATCAGAGGCT+AGG - chr2.4:1018603-1018622 None:intergenic 55.0%
TCCTTCCAATCACCCCCACT+TGG - chr2.4:1014160-1014179 None:intergenic 55.0%
AGCTCCCGGTACTTGCCATG+AGG - chr2.4:1017503-1017522 None:intergenic 60.0%
CGAACTGGACAGCCAAGTGG+GGG + chr2.4:1014145-1014164 MS.gene067449:CDS 60.0%
CTCCCCTCATGGCAAGTACC+GGG + chr2.4:1017496-1017515 MS.gene067449:intron 60.0%
CTCCCGGTACTTGCCATGAG+GGG - chr2.4:1017501-1017520 None:intergenic 60.0%
GACAGCCAAGTGGGGGTGAT+TGG + chr2.4:1014152-1014171 MS.gene067449:CDS 60.0%
GCACGAACTGGACAGCCAAG+TGG + chr2.4:1014142-1014161 MS.gene067449:intron 60.0%
GCCAAGTGGGGGTGATTGGA+AGG + chr2.4:1014156-1014175 MS.gene067449:CDS 60.0%
GCTCCCCTCATGGCAAGTAC+CGG + chr2.4:1017495-1017514 MS.gene067449:intron 60.0%
GCTCCCGGTACTTGCCATGA+GGG - chr2.4:1017502-1017521 None:intergenic 60.0%
TTGGCCCTAGCCTCTGATCC+AGG + chr2.4:1018595-1018614 MS.gene067449:intron 60.0%
GATGGCTAGACACCGGGTCC+AGG + chr2.4:1018539-1018558 MS.gene067449:intron 65.0%
ACACCGGGTCCAGGACCCTG+TGG + chr2.4:1018548-1018567 MS.gene067449:intron 70.0%
TGGCCACAGGGTCCTGGACC+CGG - chr2.4:1018554-1018573 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr2.4 gene 1013868 1018906 1013868 ID=MS.gene067449
chr2.4 mRNA 1013868 1018906 1013868 ID=MS.gene067449.t1;Parent=MS.gene067449
chr2.4 exon 1013868 1013883 1013868 ID=MS.gene067449.t1.exon1;Parent=MS.gene067449.t1
chr2.4 CDS 1013868 1013883 1013868 ID=cds.MS.gene067449.t1;Parent=MS.gene067449.t1
chr2.4 exon 1014143 1014195 1014143 ID=MS.gene067449.t1.exon2;Parent=MS.gene067449.t1
chr2.4 CDS 1014143 1014195 1014143 ID=cds.MS.gene067449.t1;Parent=MS.gene067449.t1
chr2.4 exon 1014293 1015049 1014293 ID=MS.gene067449.t1.exon3;Parent=MS.gene067449.t1
chr2.4 CDS 1014293 1015049 1014293 ID=cds.MS.gene067449.t1;Parent=MS.gene067449.t1
chr2.4 exon 1015386 1015850 1015386 ID=MS.gene067449.t1.exon4;Parent=MS.gene067449.t1
chr2.4 CDS 1015386 1015850 1015386 ID=cds.MS.gene067449.t1;Parent=MS.gene067449.t1
chr2.4 exon 1017176 1017269 1017176 ID=MS.gene067449.t1.exon5;Parent=MS.gene067449.t1
chr2.4 CDS 1017176 1017269 1017176 ID=cds.MS.gene067449.t1;Parent=MS.gene067449.t1
chr2.4 exon 1018280 1018394 1018280 ID=MS.gene067449.t1.exon6;Parent=MS.gene067449.t1
chr2.4 CDS 1018280 1018394 1018280 ID=cds.MS.gene067449.t1;Parent=MS.gene067449.t1
chr2.4 exon 1018826 1018906 1018826 ID=MS.gene067449.t1.exon7;Parent=MS.gene067449.t1
chr2.4 CDS 1018826 1018906 1018826 ID=cds.MS.gene067449.t1;Parent=MS.gene067449.t1
Gene Sequence

>MS.gene067449

ATGGCGACGATGTCAGGTTAGTTTCAATCAGGATAGCATATAATAGGGTTTTGATAAACCGTGAACCTTGATTTTTGCACTTATCCTGTTTCTTTAAATCCTGATAATCATCTTATTTCATTTAAAGAAAAATTGAGACTGTTGTCTTTATCGTTTCCATTTATCGAATGTTTATCCTTCAATTTTTTGCCATCTTAATGCTTTTGGGAATATGCGGTATCCCTGTTGTACCGTTTATCATAATATATATGTTATAGATTCTTTGGATTTAACAGCACGAACTGGACAGCCAAGTGGGGGTGATTGGAAGGAAGAAGTAGATCAAAAGGTAATATGCTATTTTCTCATCTTTATTTCTTCAGTGAATAAGGTTGAAAAACAATAAATTCTGTAGTTAAATGATGGATTTTAATGCTTCTGTTTAGAAGATGGATACTACTGCACTGCCAGTTAAGAGGTTATTTGACAGCAACAATTCCTTGGAAAGCAACAATTCCTTGGAATTTTCTGTTAAGAAATCAAAGGTGTCACTATACGATGATCGTGACAAAGATGAAGACGATATTCCTTCGTTGAATATGAATAAAAGGCCAGGCAAATCAGCTGATAATTCATTTTCCTCGCTGAGGAAAGAACTTGCATTGTTGAAAAAATCATTTGAGGAATGCAACGGGAATCAACAAATAGAAGAGTGGCGATTGTGGTCCATAAAGAGAAATATTGAGAAGTGCTGCAAAGAGCTAGAAAATAAGGAGACCCAAGTTAAGGAACTTGAGTCTGAAAAGAATATACTTGATGGTCGAGTAAATGAGCTTGAATCAAAAAAGGGTGAATTTGATGGCCTAGTGAAGAACTTTGAATCAGAAAAGACACATTTCGCGAGCCGACAAAAGGAATTTGAATCAAAAGAAAAGGAATTTGAAAGAAGAGTGAAGGAGTTCCAGTCAAAAGAGGAGGAATTTAAAGGTCGAGTGAAAGTGTTTGAAGCAAAGGAAGAGGAATTCGAAGGAAAAATGCAGCAATTTGAAAACCAAGCTGAGGACAATCTCAAAGCACTCCAGTTAAAAGAGAATCAGATTGAAGTACAAATCAAGGATCCTGAGTCAAAGCTGAATAATTTTGGTGGACAACTAAAGGAGCTTGAGTTGACAGAGAAACAATACGATGAAGAAAAAGAATTTGGTAAATTTTGCTATTCATCTATTTTATTGAAAGAATTTCATTTCAACAACAACTTTTATGGATGCAGTACATCTTAACCAAGTTGAAAAGCTAGTCCAGTTTCTATATCACACACATAATAGTCCTATTTGTAGTTTTGGCTATAATATTAATCAATTAAACACTACTCCAATGATTCACTAAGTTTCTATATTGACATTGAAACTGTTAGTATAATGTTTTTCTCCACATGCTTTCATAGTATATATCTTTTTTAATTCCTATTGTCACCTTCAATTTTTGTTGCTTATGTAAATATGATCAGAGAGCTTGACTATCTGCTATCTAAATATGCAGATACATCTAACATGGATGATCAATTCAGTATCACCATTGATGGAACAAGTGAGGAATTTGGCATTCTAGATAATTTGCGAAAATCATCAGATCCAGCAAAACTTGTTTTGGATATAATACTAAACCCCACGATTCCACTGCCTAAGAAGGGAGACAAAGCTGTGATTATTGATGAAAGCCGCATCTATCTGCTAGAAAAACTGATGATAATCTCACCAGATATTAAATCTTGTGTAAGAGATGAAGCTTTGAAGCTAGCACGTGAATTGAAAGCTAACATGAAAGAAAATACTGAAAATTCTTTGGAGGTTCTCGGATTTCTGATGATTTTGTCGATTTATGGATTGCTTACTTACTTTGATGAAGATGAAGTCTTCAAGCTTTTTGCTTCTGTTGCGTCTGTTGCTGAATACAAGATAGCTGTAAAGCTGTTTAGGACCCTGGGTTTTGTACATAAAGTCTCTGGTATGTTGATTTAGAAATTCTTTCGTCAGTCATCAGAATCTCTCTTATTGTGTCTATGCTTATGTTACATCATATAATTATCAAATCCATATTGCAATTTTGTATCTAATCATGTCTTTTATGTTGTTTTAGATTGGCTTTAAATTTTAGTTGGAAATCAGTGCATACTGTGAACTTAAGAAGTTGATAGAATGTTGATTACATTTGTAGCTCATTTACATTTTTGCATGTTTGATAAAAAATGTATGATAGATTTTTGAGAAAAACTTATGTAGAACATATTATTTGTGTGGTTGTACAAATGTTCCTGAAATAGGACAACTCTTGTTTAAATTTGCCAAAGTCAAATACTTTTAGATGATAAGTAAAAACTATGCAGGATATCCACAAAGATACTAAGATTAATAAGATATTAGATCTAGGTAACTTGGTACAAAATTGAACTCATGCAATTGGCTTCATTTTGTTTCCCCAAACAGTTTTGTCAATTGTTAAGAGAAAATTGACTTCTTGGGTGTTAATGTTTGGAAACTGAAATAGACTTGAAATCTATCTATCTTTTTATGTATCTCTTTCATTTTCTAAATGGTTTGATTAATTTTGAATTATTCAAACCAATTTGTTAGTTTTTTGTTAAGTAGAACTTATTTAGCCTACATTCTAGAAGTTTAAATGATGTGAATTTTTCTTCCACCTTGCAAATTTTGTTAAGAAATCAAGATGAAGAAATTTGATTCAGTTAATTGGCCGACAAAAATGAACAAGTTTTTGCACTAGAAAAATTTATTGTTGAAACCTGCTAATAGGATTTGACTACTAATGCTGGAATCTTAGATTTTTTTTCTTTTGTATTTTAATTTTCAAGGCTTAGTTTTGTTATGTAGAAACATTTTCATGCGTAATTTGTGCAATCATTTTTTTTTGTAAAGAAACCTTTAAGTTGAATGTGAAAATGACAATCAATTTTAATTTGAATTATCTTGTTATCCACTCTTACAATCCATCTCAAAGAAATAAGAGCTAATATGGGTATTGAGATTGGTTTATGTAGCTCAAAACTTATTTTTTGTTGAATTAAATTAACCATCGATTACAACATCAGTTGAGTTCAACGAAAATAGTTAGAGTTCTGTTATATTATGTGACGAATCAATTTTCAAATTTCGGTTAAGTTGGTTTGAAGCAATTTTAGCTTTTCTCTCCAAAGTGAGGATAAAATAAGAGCAGTTTTAGCTTTTCAGTTTGGCTCACTGAAAAATCAGTACCACTAATTACCTTTTAAATGTTATATTCGTATATATTCATCCTATATACCTTCCTTTCAGAGTCCTGTGATTGGAGAGTTCAATTTCGTACTAGTGATTGGAGTTGGAGAGGTCAATTGTCACCCGAATCACGCACAAGTATTGTCTCCAAAATGTAAGCTTTAGTTTTAATACGGTATCACTGATTTGATATGTAGTTTTTTACTATTAATGTATATCAAAATAACAATTAAATATAGATTGTTGATTGATATGATTCCATAGACTGGCAACATTTCATTAGGTTTTCGGCCTCTTTTTTATAAGAAAAGAAAAATATATGTATGATAAGGCTCATGCACGGACTTCTAATATGAAAAACGATACATAGTACTATAAAGCTCCCCTCATGGCAAGTACCGGGAGCTCTGTTGTGAATCTATTGCAACAGTCTTATCTTGCATTTGCAAGAGGTTGATTCCACTAATCAAACCTCGACTTCGTAGTCATTTCATATGGAAGAAACTCCATTTGTTGTGTCAAGACTCACCTTCAGACTTCGAATATGATACTGAAGAAACTTATATATAGCACAGATTCAAATAAACACCAGTTTCATGTGTGGGCATTGTGTGTCCCCGTAGAATGTGGATTATGGACTTCTCTTGCTTATTCAATTTAGACCTTTAGGTCTTGAAGGAGGAGAAAGAACCAAGTTTATGTTTTCCATGTGCTATCTTTGTATGCATGAGGCGTGTTTGGTTGGAGATTGCTTTCAATGAGTTTTGAACAAGAACCTGGGTTTTTTGCATGCTGTTTCAGGGTTGTGGTTTTGGCTCTTACGTCACATTCTTCTCAATTTCTTATGTTTTATGGAAAATGGATGTTTATTGGAAAACTAAAGTAATGTTTATAGTATTTATTTTCCTAATGTTGCCAAGAAAATTTCTTAAGGAGGAGAATATCTAAGATGTTATTGAGTAAATTTCGAGTACTCTTAAGCCATGTCTGACGTCCATTCTACTTCCTATTTTTGGCGGGGATAATGAAAACATGTCCAGATGACTTTAGCGAGTTCTTCTTGCATGTCGGTCATATTCTATTATATGAGGGTCGTCCAATGACAATAACATATCAAGAACTCATTTTATTTAATAATTGAGCCACTGTTTTTCATTTTTGTAGCGTGGAGATATTAAAAAGATGTCTTCCTCTTGGTTGTGGTGTAGAGGGATTGCATCATCTTTGGAAGATTGCCCTGCGGTTTGAAGAGAAGATGTTTACAGCTGCAACAAGTCAGGTACATCTCTAATTAGAAGCCTCGTGATTATCAATTTATTATAGTTATCTGTACTAACGCACATGGAAGATTGACACTTTACTGTTGCATTCCCTAATTTCAGTATGATTACAACTGGAAAATAGCTAGTAAGTTGCTTCAAACGATGGCTAGACACCGGGTCCAGGACCCTGTGGCCAACAATTTACCAACGAATCAAGTTGGCCCTAGCCTCTGATCCAGGTTAGCATTTAAAAGCCTTGGCATGGTAAAAGTATTCCGAGAGTATCTGACTCTCAGTTGTTTCATGTCTTTCAACATTAGCTATTAGGAGTTAGGACTATACTATGAAATATTGTTTTGAAATATAATTAAAACTTCAAGTTCTTCTCGTCCTACATGATCATTATCCCTATCATCCTAATTTTTTTAAAATTTTTAATATTTTGCAGAACACTCGTGAAACAACTTCTAGTGCTGATTTGATTAAATGGATTCCTCCAAATTCTAGTGAAGTTGCTACTTGCTCTTAA
Protein sequence

>MS.gene067449.t1

MATMSARTGQPSGGDWKEEVDQKKMDTTALPVKRLFDSNNSLESNNSLEFSVKKSKVSLYDDRDKDEDDIPSLNMNKRPGKSADNSFSSLRKELALLKKSFEECNGNQQIEEWRLWSIKRNIEKCCKELENKETQVKELESEKNILDGRVNELESKKGEFDGLVKNFESEKTHFASRQKEFESKEKEFERRVKEFQSKEEEFKGRVKVFEAKEEEFEGKMQQFENQAEDNLKALQLKENQIEVQIKDPESKLNNFGGQLKELELTEKQYDEEKEFDTSNMDDQFSITIDGTSEEFGILDNLRKSSDPAKLVLDIILNPTIPLPKKGDKAVIIDESRIYLLEKLMIISPDIKSCVRDEALKLARELKANMKENTENSLEVLGFLMILSIYGLLTYFDEDEVFKLFASVASVAEYKIAVKLFRTLGFVHKVSESCDWRVQFRTSDWSWRGQLSPESRTSIVSKIVEILKRCLPLGCGVEGLHHLWKIALRFEEKMFTAATSQNTRETTSSADLIKWIPPNSSEVATCS