Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059958.t1 | XP_013457718.1 | 97.6 | 450 | 11 | 0 | 1 | 450 | 1 | 450 | 1.30E-248 | 868.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059958.t1 | P92961 | 42.0 | 417 | 240 | 2 | 35 | 450 | 27 | 442 | 9.8e-93 | 342.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059958.t1 | A0A072UPI2 | 97.6 | 450 | 11 | 0 | 1 | 450 | 1 | 450 | 9.0e-249 | 868.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051588 | MS.gene059958 | 0.815837 | 7.53E-52 | -1.69E-46 |
| MS.gene052011 | MS.gene059958 | -0.801964 | 7.02E-49 | -1.69E-46 |
| MS.gene054183 | MS.gene059958 | 0.827732 | 1.33E-54 | -1.69E-46 |
| MS.gene05594 | MS.gene059958 | 0.815444 | 9.22E-52 | -1.69E-46 |
| MS.gene059420 | MS.gene059958 | 0.844313 | 8.17E-59 | -1.69E-46 |
| MS.gene059868 | MS.gene059958 | 0.830344 | 3.10E-55 | -1.69E-46 |
| MS.gene059958 | MS.gene061114 | -0.813644 | 2.31E-51 | -1.69E-46 |
| MS.gene059958 | MS.gene061506 | 0.806942 | 6.44E-50 | -1.69E-46 |
| MS.gene059958 | MS.gene062852 | 0.805604 | 1.23E-49 | -1.69E-46 |
| MS.gene059958 | MS.gene065168 | 0.817589 | 3.05E-52 | -1.69E-46 |
| MS.gene059958 | MS.gene065350 | -0.821411 | 4.10E-53 | -1.69E-46 |
| MS.gene059958 | MS.gene066009 | 0.839587 | 1.45E-57 | -1.69E-46 |
| MS.gene059958 | MS.gene066206 | 0.814722 | 1.33E-51 | -1.69E-46 |
| MS.gene059958 | MS.gene067310 | 0.812421 | 4.28E-51 | -1.69E-46 |
| MS.gene059958 | MS.gene067449 | 0.804039 | 2.62E-49 | -1.69E-46 |
| MS.gene059958 | MS.gene069383 | 0.800557 | 1.36E-48 | -1.69E-46 |
| MS.gene059958 | MS.gene08264 | 0.844646 | 6.65E-59 | -1.69E-46 |
| MS.gene059958 | MS.gene08906 | 0.844339 | 8.04E-59 | -1.69E-46 |
| MS.gene059958 | MS.gene08908 | 0.843681 | 1.21E-58 | -1.69E-46 |
| MS.gene059958 | MS.gene09538 | 0.807144 | 5.83E-50 | -1.69E-46 |
| MS.gene059958 | MS.gene09541 | 0.80274 | 4.86E-49 | -1.69E-46 |
| MS.gene059958 | MS.gene09617 | 0.800116 | 1.68E-48 | -1.69E-46 |
| MS.gene059958 | MS.gene20556 | 0.816753 | 4.70E-52 | -1.69E-46 |
| MS.gene059958 | MS.gene23009 | 0.80523 | 1.48E-49 | -1.69E-46 |
| MS.gene059958 | MS.gene24742 | 0.817514 | 3.17E-52 | -1.69E-46 |
| MS.gene059958 | MS.gene26487 | 0.861827 | 7.80E-64 | -1.69E-46 |
| MS.gene059958 | MS.gene28385 | 0.800633 | 1.32E-48 | -1.69E-46 |
| MS.gene059958 | MS.gene28507 | 0.821124 | 4.77E-53 | -1.69E-46 |
| MS.gene059958 | MS.gene30475 | 0.82485 | 6.45E-54 | -1.69E-46 |
| MS.gene059958 | MS.gene30733 | 0.811602 | 6.45E-51 | -1.69E-46 |
| MS.gene059958 | MS.gene33172 | 0.81827 | 2.14E-52 | -1.69E-46 |
| MS.gene059958 | MS.gene33198 | 0.816986 | 4.17E-52 | -1.69E-46 |
| MS.gene059958 | MS.gene34220 | 0.82931 | 5.53E-55 | -1.69E-46 |
| MS.gene059958 | MS.gene34874 | 0.843549 | 1.31E-58 | -1.69E-46 |
| MS.gene059958 | MS.gene36309 | 0.801348 | 9.40E-49 | -1.69E-46 |
| MS.gene059958 | MS.gene37618 | -0.823954 | 1.05E-53 | -1.69E-46 |
| MS.gene059958 | MS.gene39685 | 0.843389 | 1.44E-58 | -1.69E-46 |
| MS.gene059958 | MS.gene40678 | 0.805516 | 1.29E-49 | -1.69E-46 |
| MS.gene059958 | MS.gene41565 | 0.800595 | 1.34E-48 | -1.69E-46 |
| MS.gene059958 | MS.gene42548 | 0.807419 | 5.10E-50 | -1.69E-46 |
| MS.gene059958 | MS.gene44474 | -0.807395 | 5.16E-50 | -1.69E-46 |
| MS.gene059958 | MS.gene44996 | 0.822898 | 1.85E-53 | -1.69E-46 |
| MS.gene059958 | MS.gene48302 | 0.884152 | 2.45E-71 | -1.69E-46 |
| MS.gene059958 | MS.gene49092 | 0.807944 | 3.95E-50 | -1.69E-46 |
| MS.gene059958 | MS.gene50985 | 0.800584 | 1.35E-48 | -1.69E-46 |
| MS.gene059958 | MS.gene52353 | 0.820964 | 5.19E-53 | -1.69E-46 |
| MS.gene059958 | MS.gene52997 | 0.843888 | 1.06E-58 | -1.69E-46 |
| MS.gene059958 | MS.gene53143 | 0.800316 | 1.53E-48 | -1.69E-46 |
| MS.gene059958 | MS.gene60286 | 0.820272 | 7.49E-53 | -1.69E-46 |
| MS.gene059958 | MS.gene60828 | 0.805966 | 1.03E-49 | -1.69E-46 |
| MS.gene059958 | MS.gene60918 | 0.804672 | 1.93E-49 | -1.69E-46 |
| MS.gene059958 | MS.gene61225 | 0.832526 | 8.99E-56 | -1.69E-46 |
| MS.gene059958 | MS.gene61547 | -0.810399 | 1.18E-50 | -1.69E-46 |
| MS.gene059958 | MS.gene61653 | 0.800587 | 1.34E-48 | -1.69E-46 |
| MS.gene059958 | MS.gene64032 | 0.821196 | 4.59E-53 | -1.69E-46 |
| MS.gene059958 | MS.gene64910 | 0.83869 | 2.48E-57 | -1.69E-46 |
| MS.gene059958 | MS.gene65284 | 0.802577 | 5.25E-49 | -1.69E-46 |
| MS.gene059958 | MS.gene66208 | 0.868284 | 7.32E-66 | -1.69E-46 |
| MS.gene059958 | MS.gene66440 | 0.800679 | 1.29E-48 | -1.69E-46 |
| MS.gene059958 | MS.gene67246 | 0.822647 | 2.12E-53 | -1.69E-46 |
| MS.gene059958 | MS.gene67306 | 0.82039 | 7.04E-53 | -1.69E-46 |
| MS.gene059958 | MS.gene68108 | 0.804063 | 2.59E-49 | -1.69E-46 |
| MS.gene059958 | MS.gene68339 | 0.810864 | 9.32E-51 | -1.69E-46 |
| MS.gene059958 | MS.gene68419 | 0.808114 | 3.63E-50 | -1.69E-46 |
| MS.gene059958 | MS.gene68421 | 0.806103 | 9.68E-50 | -1.69E-46 |
| MS.gene059958 | MS.gene70072 | 0.834701 | 2.57E-56 | -1.69E-46 |
| MS.gene059958 | MS.gene70077 | 0.822177 | 2.72E-53 | -1.69E-46 |
| MS.gene059958 | MS.gene70368 | 0.818564 | 1.84E-52 | -1.69E-46 |
| MS.gene059958 | MS.gene70897 | 0.802674 | 5.02E-49 | -1.69E-46 |
| MS.gene059958 | MS.gene72054 | 0.845671 | 3.51E-59 | -1.69E-46 |
| MS.gene059958 | MS.gene72676 | 0.855084 | 8.00E-62 | -1.69E-46 |
| MS.gene059958 | MS.gene72677 | 0.811641 | 6.33E-51 | -1.69E-46 |
| MS.gene059958 | MS.gene72988 | 0.830041 | 3.67E-55 | -1.69E-46 |
| MS.gene059958 | MS.gene74803 | 0.80282 | 4.68E-49 | -1.69E-46 |
| MS.gene059958 | MS.gene74809 | 0.801711 | 7.91E-49 | -1.69E-46 |
| MS.gene059958 | MS.gene78643 | 0.80369 | 3.09E-49 | -1.69E-46 |
| MS.gene059958 | MS.gene81602 | 0.805277 | 1.44E-49 | -1.69E-46 |
| MS.gene059958 | MS.gene82521 | 0.858469 | 8.06E-63 | -1.69E-46 |
| MS.gene059958 | MS.gene86972 | 0.810195 | 1.30E-50 | -1.69E-46 |
| MS.gene059958 | MS.gene87384 | 0.80599 | 1.02E-49 | -1.69E-46 |
| MS.gene059958 | MS.gene87631 | 0.841058 | 5.98E-58 | -1.69E-46 |
| MS.gene059958 | MS.gene90950 | 0.824018 | 1.01E-53 | -1.69E-46 |
| MS.gene059958 | MS.gene91657 | 0.809894 | 1.51E-50 | -1.69E-46 |
| MS.gene059958 | MS.gene94682 | 0.828254 | 9.96E-55 | -1.69E-46 |
| MS.gene059958 | MS.gene95707 | 0.822107 | 2.83E-53 | -1.69E-46 |
| MS.gene059958 | MS.gene95885 | 0.801323 | 9.51E-49 | -1.69E-46 |
| MS.gene059958 | MS.gene96111 | 0.87472 | 5.42E-68 | -1.69E-46 |
| MS.gene059958 | MS.gene97211 | 0.840198 | 1.00E-57 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059958.t1 | MTR_4g104510 | 97.556 | 450 | 11 | 0 | 1 | 450 | 1 | 450 | 0.0 | 899 |
| MS.gene059958.t1 | MTR_4g104510 | 97.111 | 450 | 11 | 1 | 1 | 450 | 1 | 448 | 0.0 | 890 |
| MS.gene059958.t1 | MTR_5g081630 | 42.708 | 384 | 218 | 2 | 68 | 450 | 1 | 383 | 2.13e-106 | 320 |
| MS.gene059958.t1 | MTR_3g069960 | 40.930 | 430 | 247 | 3 | 27 | 450 | 8 | 436 | 2.20e-106 | 322 |
| MS.gene059958.t1 | MTR_3g069960 | 41.047 | 363 | 212 | 2 | 89 | 450 | 22 | 383 | 6.83e-94 | 288 |
| MS.gene059958.t1 | MTR_3g069960 | 41.639 | 305 | 172 | 2 | 27 | 325 | 8 | 312 | 1.87e-75 | 240 |
| MS.gene059958.t1 | MTR_1g070470 | 29.314 | 423 | 280 | 12 | 41 | 450 | 24 | 440 | 9.27e-48 | 170 |
| MS.gene059958.t1 | MTR_1g492640 | 29.930 | 431 | 273 | 12 | 39 | 449 | 59 | 480 | 5.63e-45 | 163 |
| MS.gene059958.t1 | MTR_8g099320 | 27.130 | 446 | 298 | 14 | 22 | 447 | 9 | 447 | 4.02e-40 | 149 |
| MS.gene059958.t1 | MTR_1g492640 | 29.940 | 334 | 218 | 8 | 128 | 449 | 19 | 348 | 2.91e-38 | 142 |
| MS.gene059958.t1 | MTR_4g055610 | 27.434 | 452 | 306 | 12 | 18 | 450 | 14 | 462 | 4.18e-38 | 144 |
| MS.gene059958.t1 | MTR_6g022790 | 25.918 | 463 | 307 | 14 | 12 | 448 | 3 | 455 | 6.10e-35 | 135 |
| MS.gene059958.t1 | MTR_2g101920 | 24.086 | 465 | 316 | 14 | 15 | 447 | 1 | 460 | 4.54e-30 | 122 |
| MS.gene059958.t1 | MTR_4g103890 | 25.510 | 392 | 271 | 11 | 68 | 446 | 38 | 421 | 3.75e-29 | 119 |
| MS.gene059958.t1 | MTR_1g492640 | 30.267 | 337 | 205 | 12 | 5 | 318 | 2 | 331 | 8.07e-28 | 114 |
| MS.gene059958.t1 | MTR_5g054730 | 26.531 | 392 | 269 | 10 | 68 | 447 | 54 | 438 | 9.64e-28 | 115 |
| MS.gene059958.t1 | MTR_1g492640 | 31.313 | 297 | 181 | 9 | 39 | 318 | 59 | 349 | 1.10e-27 | 114 |
| MS.gene059958.t1 | MTR_8g080120 | 24.235 | 392 | 280 | 10 | 68 | 448 | 51 | 436 | 1.50e-27 | 114 |
| MS.gene059958.t1 | MTR_6g022780 | 25.888 | 394 | 272 | 9 | 68 | 448 | 42 | 428 | 2.18e-26 | 110 |
| MS.gene059958.t1 | MTR_6g023075 | 26.835 | 395 | 267 | 12 | 68 | 448 | 42 | 428 | 3.49e-26 | 110 |
| MS.gene059958.t1 | MTR_6g023065 | 26.087 | 391 | 274 | 9 | 68 | 448 | 78 | 463 | 1.61e-25 | 108 |
| MS.gene059958.t1 | MTR_7g038910 | 26.718 | 393 | 269 | 13 | 68 | 448 | 58 | 443 | 1.10e-24 | 106 |
| MS.gene059958.t1 | MTR_1g093020 | 25.641 | 390 | 275 | 11 | 68 | 447 | 52 | 436 | 2.93e-24 | 105 |
| MS.gene059958.t1 | MTR_1g093030 | 24.872 | 390 | 278 | 9 | 68 | 447 | 52 | 436 | 1.04e-23 | 103 |
| MS.gene059958.t1 | MTR_3g005740 | 24.561 | 399 | 268 | 12 | 71 | 448 | 83 | 469 | 1.78e-23 | 102 |
| MS.gene059958.t1 | MTR_2g096830 | 26.087 | 391 | 275 | 9 | 68 | 448 | 42 | 428 | 2.20e-22 | 99.4 |
| MS.gene059958.t1 | MTR_7g038910 | 26.198 | 313 | 208 | 12 | 68 | 369 | 58 | 358 | 1.80e-20 | 93.2 |
| MS.gene059958.t1 | MTR_7g038910 | 26.786 | 280 | 191 | 10 | 68 | 336 | 58 | 334 | 2.37e-20 | 92.8 |
| MS.gene059958.t1 | MTR_4g075750 | 23.711 | 485 | 299 | 20 | 5 | 447 | 44 | 499 | 5.53e-20 | 92.8 |
| MS.gene059958.t1 | MTR_1g093020 | 26.012 | 346 | 241 | 11 | 68 | 403 | 52 | 392 | 1.13e-19 | 91.3 |
| MS.gene059958.t1 | MTR_3g115090 | 25.428 | 409 | 258 | 16 | 71 | 447 | 115 | 508 | 2.04e-18 | 87.8 |
| MS.gene059958.t1 | MTR_2g096830 | 24.555 | 281 | 202 | 6 | 68 | 339 | 42 | 321 | 2.10e-16 | 80.5 |
| MS.gene059958.t1 | MTR_5g023240 | 26.027 | 365 | 222 | 16 | 71 | 403 | 117 | 465 | 6.07e-16 | 80.5 |
| MS.gene059958.t1 | MTR_0531s0020 | 25.670 | 261 | 182 | 8 | 68 | 318 | 77 | 335 | 1.08e-15 | 78.6 |
| MS.gene059958.t1 | MTR_1g007380 | 25.217 | 460 | 285 | 20 | 18 | 433 | 7 | 451 | 1.44e-15 | 79.0 |
| MS.gene059958.t1 | MTR_3g461440 | 25.728 | 412 | 256 | 17 | 71 | 440 | 54 | 457 | 2.45e-15 | 78.2 |
| MS.gene059958.t1 | MTR_3g061390 | 24.634 | 410 | 263 | 15 | 71 | 440 | 54 | 457 | 4.13e-15 | 77.4 |
| MS.gene059958.t1 | MTR_4g055637 | 29.108 | 213 | 120 | 6 | 253 | 450 | 182 | 378 | 5.01e-15 | 76.6 |
| MS.gene059958.t1 | MTR_3g088455 | 22.653 | 490 | 326 | 19 | 1 | 450 | 2 | 478 | 5.74e-15 | 77.4 |
| MS.gene059958.t1 | MTR_3g085820 | 22.678 | 366 | 252 | 13 | 29 | 369 | 8 | 367 | 6.39e-15 | 76.6 |
| MS.gene059958.t1 | MTR_5g023260 | 23.889 | 360 | 237 | 12 | 71 | 403 | 138 | 487 | 3.93e-14 | 74.7 |
| MS.gene059958.t1 | MTR_3g110660 | 23.529 | 425 | 267 | 18 | 71 | 447 | 64 | 478 | 6.81e-14 | 73.9 |
| MS.gene059958.t1 | MTR_1g105995 | 22.965 | 479 | 290 | 22 | 33 | 447 | 3 | 466 | 3.10e-13 | 71.6 |
| MS.gene059958.t1 | MTR_3g096830 | 23.846 | 390 | 246 | 13 | 71 | 421 | 57 | 434 | 4.06e-13 | 71.6 |
| MS.gene059958.t1 | MTR_3g461430 | 24.427 | 393 | 259 | 13 | 71 | 427 | 61 | 451 | 5.42e-13 | 71.2 |
| MS.gene059958.t1 | MTR_1g007270 | 23.765 | 425 | 265 | 15 | 67 | 447 | 60 | 469 | 1.18e-12 | 70.1 |
| MS.gene059958.t1 | MTR_3g096800 | 21.882 | 425 | 273 | 12 | 71 | 449 | 64 | 475 | 1.88e-12 | 69.3 |
| MS.gene059958.t1 | MTR_1g106000 | 23.636 | 440 | 261 | 21 | 71 | 449 | 46 | 471 | 1.86e-11 | 66.2 |
| MS.gene059958.t1 | MTR_1g105990 | 23.567 | 471 | 292 | 23 | 21 | 439 | 4 | 458 | 7.32e-11 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059958.t1 | AT3G55740 | 40.000 | 440 | 259 | 3 | 15 | 450 | 1 | 439 | 2.79e-117 | 350 |
| MS.gene059958.t1 | AT2G39890 | 40.268 | 447 | 257 | 4 | 7 | 450 | 3 | 442 | 1.03e-116 | 349 |
| MS.gene059958.t1 | AT2G39890 | 40.268 | 447 | 257 | 4 | 7 | 450 | 3 | 442 | 1.03e-116 | 349 |
| MS.gene059958.t1 | AT2G36590 | 39.359 | 437 | 263 | 2 | 15 | 450 | 1 | 436 | 1.22e-105 | 320 |
| MS.gene059958.t1 | AT3G55740 | 41.406 | 384 | 223 | 2 | 68 | 450 | 1 | 383 | 6.42e-105 | 317 |
| MS.gene059958.t1 | AT3G55740 | 41.406 | 384 | 223 | 2 | 68 | 450 | 1 | 383 | 6.42e-105 | 317 |
| MS.gene059958.t1 | AT2G39890 | 41.667 | 384 | 222 | 2 | 68 | 450 | 1 | 383 | 4.04e-104 | 315 |
| MS.gene059958.t1 | AT2G36590 | 41.667 | 312 | 181 | 1 | 15 | 325 | 1 | 312 | 2.54e-83 | 259 |
| MS.gene059958.t1 | AT5G41800 | 28.070 | 399 | 260 | 11 | 71 | 449 | 57 | 448 | 1.45e-37 | 142 |
| MS.gene059958.t1 | AT5G40780 | 25.221 | 452 | 297 | 16 | 27 | 448 | 6 | 446 | 1.00e-33 | 132 |
| MS.gene059958.t1 | AT1G08230 | 26.389 | 432 | 289 | 12 | 40 | 450 | 28 | 451 | 1.75e-33 | 131 |
| MS.gene059958.t1 | AT5G40780 | 25.954 | 393 | 272 | 12 | 68 | 448 | 13 | 398 | 1.09e-32 | 128 |
| MS.gene059958.t1 | AT5G40780 | 25.954 | 393 | 272 | 12 | 68 | 448 | 13 | 398 | 1.09e-32 | 128 |
| MS.gene059958.t1 | AT1G25530 | 28.753 | 393 | 261 | 11 | 68 | 448 | 55 | 440 | 1.27e-31 | 126 |
| MS.gene059958.t1 | AT1G08230 | 27.469 | 324 | 217 | 7 | 141 | 450 | 13 | 332 | 1.10e-30 | 121 |
| MS.gene059958.t1 | AT1G08230 | 27.469 | 324 | 217 | 7 | 141 | 450 | 13 | 332 | 1.10e-30 | 121 |
| MS.gene059958.t1 | AT1G08230 | 27.469 | 324 | 217 | 7 | 141 | 450 | 13 | 332 | 1.10e-30 | 121 |
| MS.gene059958.t1 | AT1G08230 | 27.469 | 324 | 217 | 7 | 141 | 450 | 32 | 351 | 2.40e-30 | 120 |
| MS.gene059958.t1 | AT1G48640 | 25.163 | 461 | 301 | 16 | 21 | 448 | 4 | 453 | 1.70e-29 | 120 |
| MS.gene059958.t1 | AT1G67640 | 27.062 | 388 | 268 | 9 | 71 | 448 | 59 | 441 | 3.87e-27 | 113 |
| MS.gene059958.t1 | AT1G24400 | 25.515 | 388 | 274 | 9 | 71 | 448 | 59 | 441 | 3.99e-26 | 110 |
| MS.gene059958.t1 | AT1G61270 | 21.826 | 449 | 315 | 14 | 24 | 443 | 2 | 443 | 7.49e-25 | 107 |
| MS.gene059958.t1 | AT3G01760 | 22.122 | 443 | 309 | 12 | 28 | 443 | 9 | 442 | 4.50e-23 | 101 |
| MS.gene059958.t1 | AT1G71680 | 23.516 | 455 | 311 | 16 | 19 | 448 | 6 | 448 | 2.50e-18 | 87.4 |
| MS.gene059958.t1 | AT4G35180 | 23.158 | 380 | 249 | 15 | 71 | 424 | 88 | 450 | 1.16e-15 | 79.3 |
| MS.gene059958.t1 | AT1G10010 | 24.171 | 422 | 273 | 16 | 71 | 450 | 58 | 474 | 2.63e-15 | 78.2 |
| MS.gene059958.t1 | AT1G10010 | 24.171 | 422 | 273 | 16 | 71 | 450 | 59 | 475 | 2.83e-15 | 78.2 |
| MS.gene059958.t1 | AT1G71680 | 23.782 | 349 | 234 | 12 | 19 | 343 | 6 | 346 | 1.99e-14 | 75.1 |
| MS.gene059958.t1 | AT1G44100 | 22.877 | 424 | 275 | 13 | 71 | 447 | 58 | 476 | 3.01e-13 | 72.0 |
| MS.gene059958.t1 | AT5G09220 | 21.905 | 420 | 279 | 16 | 71 | 447 | 76 | 489 | 3.93e-12 | 68.6 |
| MS.gene059958.t1 | AT4G35180 | 25.106 | 235 | 160 | 8 | 71 | 293 | 88 | 318 | 2.70e-11 | 65.1 |
| MS.gene059958.t1 | AT5G49630 | 22.062 | 485 | 300 | 21 | 18 | 447 | 17 | 478 | 3.60e-11 | 65.5 |
Find 101 sgRNAs with CRISPR-Local
Find 167 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTGGCAGGAAAATCAAATT+TGG | 0.176401 | 8.1:-19993723 | MS.gene059958:intron |
| ATCATATTGCTCTTTGTTAT+TGG | 0.207153 | 8.1:-19994916 | MS.gene059958:CDS |
| GACACTAGATTTCTAGAAAT+TGG | 0.207837 | 8.1:-19992809 | MS.gene059958:CDS |
| CAATATCTGCTATGAGAAAT+TGG | 0.226402 | 8.1:-19993915 | MS.gene059958:CDS |
| ATTGGCAAGGGTATGCATTC+AGG | 0.273550 | 8.1:-19992791 | MS.gene059958:CDS |
| CATGATCTTCCTTAAGATAA+AGG | 0.274057 | 8.1:-19992624 | MS.gene059958:CDS |
| ATTGTTGGATATTGGGCTTA+TGG | 0.290460 | 8.1:-19993235 | MS.gene059958:CDS |
| CAGTTTCTCTAACCTGATAA+TGG | 0.291775 | 8.1:-19994962 | MS.gene059958:CDS |
| TCTACACAGCTTATGCTAAT+TGG | 0.293309 | 8.1:-19994891 | MS.gene059958:CDS |
| AACAAAGTGTTCAACAGTTT+TGG | 0.296566 | 8.1:-19993668 | MS.gene059958:CDS |
| TGTTACTATTGTTGGATATT+GGG | 0.301868 | 8.1:-19993242 | MS.gene059958:CDS |
| TCATTCAATTTGCAGATTCA+TGG | 0.311610 | 8.1:-19995035 | MS.gene059958:intron |
| GTGTTACTATTGTTGGATAT+TGG | 0.315360 | 8.1:-19993243 | MS.gene059958:CDS |
| TTCCTCATGTTCTTCACTGC+TGG | 0.321851 | 8.1:+19993310 | None:intergenic |
| GACCTCATGGGATTTGTTTA+CGG | 0.325636 | 8.1:-19994817 | MS.gene059958:intron |
| TTGTTGGATATTGGGCTTAT+GGG | 0.331440 | 8.1:-19993234 | MS.gene059958:CDS |
| CTAAGGATGTGTTTCTATAC+TGG | 0.332526 | 8.1:-19992743 | MS.gene059958:CDS |
| TTTACGAAGTCACCCATAAA+AGG | 0.336030 | 8.1:+19992695 | None:intergenic |
| CCTTGGAGGCAAGGCACTTA+AGG | 0.354020 | 8.1:-19994116 | MS.gene059958:intron |
| TATTATGGTGTTACTATTGT+TGG | 0.358408 | 8.1:-19993250 | MS.gene059958:CDS |
| CTCACTCTCAACCTAGAAAA+TGG | 0.360333 | 8.1:-19995263 | MS.gene059958:CDS |
| GAAAGGTCATGAGAATCATT+TGG | 0.362478 | 8.1:+19995221 | None:intergenic |
| GGTGACTTCGTAAACTTGTT+AGG | 0.368829 | 8.1:-19992686 | MS.gene059958:CDS |
| GACAAAGATTTCAACGTTAG+TGG | 0.376792 | 8.1:-19993701 | MS.gene059958:CDS |
| TATCTTCCTGAAAACTTAAG+TGG | 0.378113 | 8.1:-19993196 | MS.gene059958:CDS |
| GTGGGGTTGATGTTGGTAAC+AGG | 0.399467 | 8.1:-19995006 | MS.gene059958:CDS |
| GGTACCAATTCATGAGGCTT+TGG | 0.402518 | 8.1:-19992831 | MS.gene059958:CDS |
| CAATACTACATAGTTGTAAC+AGG | 0.406685 | 8.1:-19993973 | MS.gene059958:CDS |
| ATGATCTTCCTTAAGATAAA+GGG | 0.407990 | 8.1:-19992623 | MS.gene059958:CDS |
| GTGTCCAAAGCCTCATGAAT+TGG | 0.413129 | 8.1:+19992827 | None:intergenic |
| CAACCACAATTTCAGCTCTT+CGG | 0.420583 | 8.1:-19992529 | MS.gene059958:CDS |
| TTTCTCATAGCAGATATTGT+TGG | 0.424947 | 8.1:+19993919 | None:intergenic |
| AACCCAATGGAACCATTATC+AGG | 0.426560 | 8.1:+19994950 | None:intergenic |
| GACCCTTCTTCTTGGAAACA+TGG | 0.438318 | 8.1:-19994149 | MS.gene059958:CDS |
| ATCTTAAGGAAGATCATGCT+TGG | 0.440044 | 8.1:+19992629 | None:intergenic |
| CAGTATAGAAACACATCCTT+AGG | 0.441046 | 8.1:+19992744 | None:intergenic |
| AAAACTTAAGTGGACCTAGA+TGG | 0.441222 | 8.1:-19993186 | MS.gene059958:CDS |
| TGGTTCCATTGGGTTGGACA+TGG | 0.445661 | 8.1:-19994942 | MS.gene059958:CDS |
| AAAGGTCATGAGAATCATTT+GGG | 0.445677 | 8.1:+19995222 | None:intergenic |
| CAGAATTTAGTGATTCTCCT+TGG | 0.449658 | 8.1:-19994002 | MS.gene059958:CDS |
| TGGCATGCTTCCTGAGATAC+AGG | 0.453025 | 8.1:-19993612 | MS.gene059958:intron |
| CCTTAAGTGCCTTGCCTCCA+AGG | 0.453288 | 8.1:+19994116 | None:intergenic |
| TAACCTGATAATGGTTCCAT+TGG | 0.457404 | 8.1:-19994953 | MS.gene059958:CDS |
| CAGAGAAGAAGGTGTGGCAT+TGG | 0.459646 | 8.1:-19992586 | MS.gene059958:CDS |
| AACATGGGTTTCATCCTCCT+TGG | 0.459771 | 8.1:-19994133 | MS.gene059958:CDS |
| AAAACTGAGAAGTCCATGTT+AGG | 0.461065 | 8.1:+19994173 | None:intergenic |
| AGCTTATGCTAATTGGCTCT+TGG | 0.463736 | 8.1:-19994884 | MS.gene059958:CDS |
| CATAGCAGATATTGTTGGAA+TGG | 0.481736 | 8.1:+19993924 | None:intergenic |
| ACCCTTCTTCTTGGAAACAT+GGG | 0.482194 | 8.1:-19994148 | MS.gene059958:CDS |
| TCTTAAGGAAGATCATGCTT+GGG | 0.483001 | 8.1:+19992630 | None:intergenic |
| AACCCATGTTTCCAAGAAGA+AGG | 0.483026 | 8.1:+19994146 | None:intergenic |
| AACAGCTAGAACAGAGAAGA+AGG | 0.483759 | 8.1:-19992597 | MS.gene059958:CDS |
| GGTTCCATTGGGTTGGACAT+GGG | 0.484989 | 8.1:-19994941 | MS.gene059958:CDS |
| AGGAAGCATGCCACTGGTGT+TGG | 0.490553 | 8.1:+19993622 | None:intergenic |
| TTGGCAAGGGTATGCATTCA+GGG | 0.493661 | 8.1:-19992790 | MS.gene059958:CDS |
| ATATTGGGCTTATGGGTCAA+TGG | 0.495313 | 8.1:-19993227 | MS.gene059958:CDS |
| TGATATATGACCTGTATCTC+AGG | 0.498117 | 8.1:+19993602 | None:intergenic |
| GTTCCATTGGGTTGGACATG+GGG | 0.499204 | 8.1:-19994940 | MS.gene059958:CDS |
| TTTCATCCTCCTTGGAGGCA+AGG | 0.502431 | 8.1:-19994125 | MS.gene059958:CDS |
| TGATAATGGTTCCATTGGGT+TGG | 0.502891 | 8.1:-19994948 | MS.gene059958:CDS |
| AACCTGATAATGGTTCCATT+GGG | 0.503329 | 8.1:-19994952 | MS.gene059958:CDS |
| TGCTCTACCTTCAACCTCCA+TGG | 0.503346 | 8.1:+19995301 | None:intergenic |
| ATGGGTTTCATCCTCCTTGG+AGG | 0.506070 | 8.1:-19994130 | MS.gene059958:CDS |
| CGAAGATGTATCACCTAACA+TGG | 0.509148 | 8.1:-19994186 | MS.gene059958:CDS |
| CATTAGATATAGAGACCTCA+TGG | 0.510064 | 8.1:-19994830 | MS.gene059958:CDS |
| TGAAACGCTTATTTCTCCTA+AGG | 0.514219 | 8.1:-19992760 | MS.gene059958:CDS |
| TAACAGGCTTCAACTGCGGT+TGG | 0.515896 | 8.1:-19994990 | MS.gene059958:CDS |
| AATTTAGTGATTCTCCTTGG+AGG | 0.519184 | 8.1:-19993999 | MS.gene059958:CDS |
| GTCAGTGTTGCAGTCAAAGA+TGG | 0.524525 | 8.1:-19993847 | MS.gene059958:intron |
| CACTGCTGGCTTACGTAGAG+TGG | 0.543561 | 8.1:+19993324 | None:intergenic |
| ATATTCACCATGGAGGTTGA+AGG | 0.546483 | 8.1:-19995308 | None:intergenic |
| TGCAGATTCATGGCAACAAG+TGG | 0.552494 | 8.1:-19995025 | MS.gene059958:intron |
| TATCTCAGGAAGCATGCCAC+TGG | 0.556314 | 8.1:+19993616 | None:intergenic |
| CAATAGTATGAGCAGTAGAA+AGG | 0.557474 | 8.1:+19995204 | None:intergenic |
| TACTGTATATTGTGAGTACA+AGG | 0.558919 | 8.1:+19993285 | None:intergenic |
| CAGATTCATGGCAACAAGTG+GGG | 0.568182 | 8.1:-19995023 | MS.gene059958:CDS |
| ATGTAGTATTGAAGCCTCCA+AGG | 0.574852 | 8.1:+19993985 | None:intergenic |
| GCAGATTCATGGCAACAAGT+GGG | 0.575388 | 8.1:-19995024 | MS.gene059958:intron |
| ATGAGCACATTGATCCATCT+AGG | 0.576845 | 8.1:+19993172 | None:intergenic |
| TAGATTTCTAGAAATTGGCA+AGG | 0.581595 | 8.1:-19992804 | MS.gene059958:CDS |
| ACCCATGTTTCCAAGAAGAA+GGG | 0.593904 | 8.1:+19994147 | None:intergenic |
| GTTTGTGGTACCAATTCATG+AGG | 0.598447 | 8.1:-19992837 | MS.gene059958:CDS |
| ATACCCCATGTCCAACCCAA+TGG | 0.600753 | 8.1:+19994937 | None:intergenic |
| TTGGTAACAGGCTTCAACTG+CGG | 0.609692 | 8.1:-19994994 | MS.gene059958:CDS |
| GCAACAAGTGGGGTTGATGT+TGG | 0.615486 | 8.1:-19995013 | MS.gene059958:CDS |
| GATCATGCTTGGGAACATGA+AGG | 0.615842 | 8.1:+19992640 | None:intergenic |
| CAAAATCCACAATCATACAT+CGG | 0.629415 | 8.1:+19992469 | None:intergenic |
| TCTGCTATGAGAAATTGGCT+AGG | 0.630609 | 8.1:-19993910 | MS.gene059958:CDS |
| ATTAGATATAGAGACCTCAT+GGG | 0.632247 | 8.1:-19994829 | MS.gene059958:CDS |
| AGCCAGCAGTGAAGAACATG+AGG | 0.634502 | 8.1:-19993312 | MS.gene059958:CDS |
| AGATTTCTAGAAATTGGCAA+GGG | 0.638033 | 8.1:-19992803 | MS.gene059958:CDS |
| CTTGGGAACATGAAGGTGAG+AGG | 0.639270 | 8.1:+19992647 | None:intergenic |
| CTAGAACAGAGAAGAAGGTG+TGG | 0.642518 | 8.1:-19992592 | MS.gene059958:CDS |
| GAACCGAAGAGCTGAAATTG+TGG | 0.644045 | 8.1:+19992526 | None:intergenic |
| AAGAAATGCTATGTATGCTA+AGG | 0.646313 | 8.1:+19993870 | None:intergenic |
| TTGTACTCACAATATACAGT+AGG | 0.648585 | 8.1:-19993283 | MS.gene059958:CDS |
| ATCATTGTTACCAACACCAG+TGG | 0.656759 | 8.1:-19993632 | MS.gene059958:CDS |
| TGGCAAGGGTATGCATTCAG+GGG | 0.680488 | 8.1:-19992789 | MS.gene059958:CDS |
| ACTGCTCATACTATTGACAA+AGG | 0.700231 | 8.1:-19995197 | MS.gene059958:intron |
| GACCGTAAACAAATCCCATG+AGG | 0.724234 | 8.1:+19994815 | None:intergenic |
| TAAGTGCCTTGCCTCCAAGG+AGG | 0.727047 | 8.1:+19994119 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTTACAAATTATAAATGAT+TGG | - | chr8.1:19993695-19993714 | MS.gene059958:CDS | 10.0% |
| !! | TAAAAATTAATTACAAAAGA+TGG | + | chr8.1:19994407-19994426 | None:intergenic | 10.0% |
| !!! | AAAATATATTTTGAAATCAA+AGG | + | chr8.1:19993988-19994007 | None:intergenic | 10.0% |
| !! | AAAAACATAAAATATTATGG+TGG | - | chr8.1:19993115-19993134 | MS.gene059958:intron | 15.0% |
| !! | ATAAAAAATAGTGATCTATA+TGG | - | chr8.1:19993366-19993385 | MS.gene059958:intron | 15.0% |
| !! | GACAAAAACATAAAATATTA+TGG | - | chr8.1:19993112-19993131 | MS.gene059958:intron | 15.0% |
| !! | TTCAATATAATTATATGTGT+CGG | + | chr8.1:19994750-19994769 | None:intergenic | 15.0% |
| !!! | GTTAATTAGTTTAAAAAGAA+AGG | + | chr8.1:19993472-19993491 | None:intergenic | 15.0% |
| !! | AAACAATTTCATGTTAATCT+AGG | + | chr8.1:19993437-19993456 | None:intergenic | 20.0% |
| !!! | ATATATTTTGAAATCAAAGG+TGG | + | chr8.1:19993985-19994004 | None:intergenic | 20.0% |
| !!! | ATTTCTGCAATATAGAATTT+TGG | + | chr8.1:19993027-19993046 | None:intergenic | 20.0% |
| !!! | TGATTTTCTCAAATTATTAG+CGG | - | chr8.1:19994775-19994794 | MS.gene059958:intron | 20.0% |
| !!! | TTTTTTATGTCTCTAGATAT+CGG | + | chr8.1:19993160-19993179 | None:intergenic | 20.0% |
| ! | ACTATGAAAGAGATTCTTAA+TGG | - | chr8.1:19993543-19993562 | MS.gene059958:intron | 25.0% |
| ! | ATGATCTTCCTTAAGATAAA+GGG | - | chr8.1:19995157-19995176 | MS.gene059958:intron | 25.0% |
| ! | ATTCTATATTGCAGAAATTG+AGG | - | chr8.1:19993029-19993048 | MS.gene059958:intron | 25.0% |
| ! | ATTTAACCACTCAAAAAATG+AGG | + | chr8.1:19994834-19994853 | None:intergenic | 25.0% |
| ! | CATAAAAAATCATGATGTCA+TGG | - | chr8.1:19993171-19993190 | MS.gene059958:CDS | 25.0% |
| ! | CATAAAATATTATGGTGGTA+TGG | - | chr8.1:19993120-19993139 | MS.gene059958:intron | 25.0% |
| ! | CTTTCATAGTTTCAATTAAG+AGG | + | chr8.1:19993533-19993552 | None:intergenic | 25.0% |
| ! | TAATTAATAAATACTCCCTC+TGG | - | chr8.1:19994216-19994235 | MS.gene059958:intron | 25.0% |
| ! | TGTTACTATTGTTGGATATT+GGG | - | chr8.1:19994538-19994557 | MS.gene059958:intron | 25.0% |
| !! | ATCATATTGCTCTTTGTTAT+TGG | - | chr8.1:19992864-19992883 | MS.gene059958:intron | 25.0% |
| !! | GAGTAACTTTTTAGATAAAG+TGG | - | chr8.1:19993729-19993748 | MS.gene059958:intron | 25.0% |
| !! | TTTTATGCAGTCACATAATT+TGG | + | chr8.1:19993352-19993371 | None:intergenic | 25.0% |
| !!! | GAGGGAGTATTTATTAATTA+TGG | + | chr8.1:19994216-19994235 | None:intergenic | 25.0% |
| !!! | GTGAAGTTGAGTTATTTTTT+TGG | - | chr8.1:19994427-19994446 | MS.gene059958:intron | 25.0% |
| !!! | TATTATGGTGTTACTATTGT+TGG | - | chr8.1:19994530-19994549 | MS.gene059958:intron | 25.0% |
| AAAATTCCGATCATATGCAA+AGG | - | chr8.1:19993086-19993105 | MS.gene059958:intron | 30.0% | |
| AAAGGTCATGAGAATCATTT+GGG | + | chr8.1:19992561-19992580 | None:intergenic | 30.0% | |
| AAATAGTTCAATACTCACTC+CGG | + | chr8.1:19994369-19994388 | None:intergenic | 30.0% | |
| AAGAAATGCTATGTATGCTA+AGG | + | chr8.1:19993913-19993932 | None:intergenic | 30.0% | |
| ACATGTAAGTATATGAAGCA+CGG | - | chr8.1:19994667-19994686 | MS.gene059958:intron | 30.0% | |
| ATTAGATATAGAGACCTCAT+GGG | - | chr8.1:19992951-19992970 | MS.gene059958:intron | 30.0% | |
| CAATACTACATAGTTGTAAC+AGG | - | chr8.1:19993807-19993826 | MS.gene059958:intron | 30.0% | |
| CAATATCTGCTATGAGAAAT+TGG | - | chr8.1:19993865-19993884 | MS.gene059958:CDS | 30.0% | |
| CATACAAAATTAAGGTTTCG+AGG | - | chr8.1:19993411-19993430 | MS.gene059958:intron | 30.0% | |
| CATGATCTTCCTTAAGATAA+AGG | - | chr8.1:19995156-19995175 | MS.gene059958:intron | 30.0% | |
| CTGATGTGCATACAAAATTA+AGG | - | chr8.1:19993403-19993422 | MS.gene059958:intron | 30.0% | |
| GGTTGCTTAATTTAATGCTA+TGG | + | chr8.1:19994025-19994044 | None:intergenic | 30.0% | |
| TACTGTATATTGTGAGTACA+AGG | + | chr8.1:19994498-19994517 | None:intergenic | 30.0% | |
| TATCTTCCTGAAAACTTAAG+TGG | - | chr8.1:19994584-19994603 | MS.gene059958:intron | 30.0% | |
| TATTACTCCATGATTTCTCT+AGG | - | chr8.1:19993569-19993588 | MS.gene059958:intron | 30.0% | |
| TATTCAATGTACCTAGAAAG+TGG | + | chr8.1:19994262-19994281 | None:intergenic | 30.0% | |
| TCATTCAATTTGCAGATTCA+TGG | - | chr8.1:19992745-19992764 | MS.gene059958:CDS | 30.0% | |
| TGCTTATAATAATGACCAGA+GGG | + | chr8.1:19994234-19994253 | None:intergenic | 30.0% | |
| TTAATGCTATGGTTTGACTA+GGG | + | chr8.1:19994014-19994033 | None:intergenic | 30.0% | |
| TTGCTTATAATAATGACCAG+AGG | + | chr8.1:19994235-19994254 | None:intergenic | 30.0% | |
| TTGTACTCACAATATACAGT+AGG | - | chr8.1:19994497-19994516 | MS.gene059958:intron | 30.0% | |
| TTTAATGCTATGGTTTGACT+AGG | + | chr8.1:19994015-19994034 | None:intergenic | 30.0% | |
| TTTCTCATAGCAGATATTGT+TGG | + | chr8.1:19993864-19993883 | None:intergenic | 30.0% | |
| ! | AGATTTCTAGAAATTGGCAA+GGG | - | chr8.1:19994977-19994996 | MS.gene059958:CDS | 30.0% |
| ! | ATAATTATATGTGTCGGTGT+CGG | + | chr8.1:19994744-19994763 | None:intergenic | 30.0% |
| ! | GACACTAGATTTCTAGAAAT+TGG | - | chr8.1:19994971-19994990 | MS.gene059958:CDS | 30.0% |
| ! | GTGTTACTATTGTTGGATAT+TGG | - | chr8.1:19994537-19994556 | MS.gene059958:intron | 30.0% |
| ! | GTTTTGCTAATAATAGTGAC+CGG | - | chr8.1:19994347-19994366 | MS.gene059958:intron | 30.0% |
| ! | TAGATTTCTAGAAATTGGCA+AGG | - | chr8.1:19994976-19994995 | MS.gene059958:CDS | 30.0% |
| ! | TGTTTTCTTGACCATTTTCT+AGG | + | chr8.1:19992531-19992550 | None:intergenic | 30.0% |
| ! | TTTTGTAATGCAGTTGTTTG+TGG | - | chr8.1:19994928-19994947 | MS.gene059958:CDS | 30.0% |
| !! | AAAAAGAAAGGCGTGTTTTT+AGG | + | chr8.1:19993460-19993479 | None:intergenic | 30.0% |
| !! | AACAAAGTGTTCAACAGTTT+TGG | - | chr8.1:19994112-19994131 | MS.gene059958:intron | 30.0% |
| !! | CTGTTTTTCCCTTTATCTTA+AGG | + | chr8.1:19995168-19995187 | None:intergenic | 30.0% |
| !!! | AAGTGGTTGTTTTTTGTGAT+AGG | - | chr8.1:19993746-19993765 | MS.gene059958:intron | 30.0% |
| !!! | ACTTTTTTCAGCAACTTGAA+GGG | - | chr8.1:19994881-19994900 | MS.gene059958:CDS | 30.0% |
| !!! | GTAGGAGTCTTGTTTTATTA+TGG | - | chr8.1:19994515-19994534 | MS.gene059958:intron | 30.0% |
| AAAACTGAGAAGTCCATGTT+AGG | + | chr8.1:19993610-19993629 | None:intergenic | 35.0% | |
| AAAACTTAAGTGGACCTAGA+TGG | - | chr8.1:19994594-19994613 | MS.gene059958:intron | 35.0% | |
| AACCACTCAAAAAATGAGGA+CGG | + | chr8.1:19994830-19994849 | None:intergenic | 35.0% | |
| AATTTAGTGATTCTCCTTGG+AGG | - | chr8.1:19993781-19993800 | MS.gene059958:intron | 35.0% | |
| ACACATCAGTCACATAATCT+AGG | + | chr8.1:19993197-19993216 | None:intergenic | 35.0% | |
| ACTGCTCATACTATTGACAA+AGG | - | chr8.1:19992583-19992602 | MS.gene059958:CDS | 35.0% | |
| ATCTTAAGGAAGATCATGCT+TGG | + | chr8.1:19995154-19995173 | None:intergenic | 35.0% | |
| ATTGTTGGATATTGGGCTTA+TGG | - | chr8.1:19994545-19994564 | MS.gene059958:intron | 35.0% | |
| CAATAGTATGAGCAGTAGAA+AGG | + | chr8.1:19992579-19992598 | None:intergenic | 35.0% | |
| CAGAATTTAGTGATTCTCCT+TGG | - | chr8.1:19993778-19993797 | MS.gene059958:intron | 35.0% | |
| CAGTATAGAAACACATCCTT+AGG | + | chr8.1:19995039-19995058 | None:intergenic | 35.0% | |
| CAGTTTCTCTAACCTGATAA+TGG | - | chr8.1:19992818-19992837 | MS.gene059958:CDS | 35.0% | |
| CATAGCAGATATTGTTGGAA+TGG | + | chr8.1:19993859-19993878 | None:intergenic | 35.0% | |
| CATTAGATATAGAGACCTCA+TGG | - | chr8.1:19992950-19992969 | MS.gene059958:intron | 35.0% | |
| GAAAGGTCATGAGAATCATT+TGG | + | chr8.1:19992562-19992581 | None:intergenic | 35.0% | |
| GACAAAGATTTCAACGTTAG+TGG | - | chr8.1:19994079-19994098 | MS.gene059958:intron | 35.0% | |
| GCAACCTTATCCATTTATGT+TGG | - | chr8.1:19994039-19994058 | MS.gene059958:intron | 35.0% | |
| GTTGGCAGGAAAATCAAATT+TGG | - | chr8.1:19994057-19994076 | MS.gene059958:intron | 35.0% | |
| TAAGCAAAACTCCACTTTCT+AGG | - | chr8.1:19994248-19994267 | MS.gene059958:intron | 35.0% | |
| TCTACACAGCTTATGCTAAT+TGG | - | chr8.1:19992889-19992908 | MS.gene059958:intron | 35.0% | |
| TCTTAAGGAAGATCATGCTT+GGG | + | chr8.1:19995153-19995172 | None:intergenic | 35.0% | |
| TGATATATGACCTGTATCTC+AGG | + | chr8.1:19994181-19994200 | None:intergenic | 35.0% | |
| TGCACTTGAGTCACATAATT+TGG | + | chr8.1:19993249-19993268 | None:intergenic | 35.0% | |
| TTGTTGGATATTGGGCTTAT+GGG | - | chr8.1:19994546-19994565 | MS.gene059958:intron | 35.0% | |
| TTTACGAAGTCACCCATAAA+AGG | + | chr8.1:19995088-19995107 | None:intergenic | 35.0% | |
| ! | CTAAGGATGTGTTTCTATAC+TGG | - | chr8.1:19995037-19995056 | MS.gene059958:intron | 35.0% |
| ! | GATTTTCCTGCCAACATAAA+TGG | + | chr8.1:19994052-19994071 | None:intergenic | 35.0% |
| ! | TGAAACGCTTATTTCTCCTA+AGG | - | chr8.1:19995020-19995039 | MS.gene059958:CDS | 35.0% |
| !! | AACCTGATAATGGTTCCATT+GGG | - | chr8.1:19992828-19992847 | MS.gene059958:CDS | 35.0% |
| !! | TAACCTGATAATGGTTCCAT+TGG | - | chr8.1:19992827-19992846 | MS.gene059958:CDS | 35.0% |
| !!! | CACTTTTTTCAGCAACTTGA+AGG | - | chr8.1:19994880-19994899 | MS.gene059958:CDS | 35.0% |
| AACAGCTAGAACAGAGAAGA+AGG | - | chr8.1:19995183-19995202 | MS.gene059958:intron | 40.0% | |
| AACCCAATGGAACCATTATC+AGG | + | chr8.1:19992833-19992852 | None:intergenic | 40.0% | |
| AACCCATGTTTCCAAGAAGA+AGG | + | chr8.1:19993637-19993656 | None:intergenic | 40.0% | |
| AAGATTGTGACGTGATCATG+TGG | + | chr8.1:19993055-19993074 | None:intergenic | 40.0% | |
| ACCCATGTTTCCAAGAAGAA+GGG | + | chr8.1:19993636-19993655 | None:intergenic | 40.0% | |
| ACCCTTCTTCTTGGAAACAT+GGG | - | chr8.1:19993632-19993651 | MS.gene059958:CDS | 40.0% | |
| ACGCATAAGTTGCATGATCT+AGG | + | chr8.1:19993300-19993319 | None:intergenic | 40.0% | |
| ATATTGGGCTTATGGGTCAA+TGG | - | chr8.1:19994553-19994572 | MS.gene059958:intron | 40.0% | |
| ATCATTGTTACCAACACCAG+TGG | - | chr8.1:19994148-19994167 | MS.gene059958:CDS | 40.0% | |
| ATGAGCACATTGATCCATCT+AGG | + | chr8.1:19994611-19994630 | None:intergenic | 40.0% | |
| CAACCACAATTTCAGCTCTT+CGG | - | chr8.1:19995251-19995270 | MS.gene059958:CDS | 40.0% | |
| CCTGCCAACATAAATGGATA+AGG | + | chr8.1:19994046-19994065 | None:intergenic | 40.0% | |
| CCTTATCCATTTATGTTGGC+AGG | - | chr8.1:19994043-19994062 | MS.gene059958:intron | 40.0% | |
| CGAAGATGTATCACCTAACA+TGG | - | chr8.1:19993594-19993613 | MS.gene059958:intron | 40.0% | |
| CTCACTCTCAACCTAGAAAA+TGG | - | chr8.1:19992517-19992536 | MS.gene059958:CDS | 40.0% | |
| CTTCGTTCCTAGAGAAATCA+TGG | + | chr8.1:19993579-19993598 | None:intergenic | 40.0% | |
| GTCCATCCTTTGCATATGAT+CGG | + | chr8.1:19993095-19993114 | None:intergenic | 40.0% | |
| GTTTGTGGTACCAATTCATG+AGG | - | chr8.1:19994943-19994962 | MS.gene059958:CDS | 40.0% | |
| TCTGCTATGAGAAATTGGCT+AGG | - | chr8.1:19993870-19993889 | MS.gene059958:CDS | 40.0% | |
| TTCCGATCATATGCAAAGGA+TGG | - | chr8.1:19993090-19993109 | MS.gene059958:intron | 40.0% | |
| ! | AGCTTATGCTAATTGGCTCT+TGG | - | chr8.1:19992896-19992915 | MS.gene059958:intron | 40.0% |
| ! | ATGTAGTATTGAAGCCTCCA+AGG | + | chr8.1:19993798-19993817 | None:intergenic | 40.0% |
| ! | CAGTTTTTGACCCTTCTTCT+TGG | - | chr8.1:19993623-19993642 | MS.gene059958:CDS | 40.0% |
| ! | CTAGGTCCACTTAAGTTTTC+AGG | + | chr8.1:19994593-19994612 | None:intergenic | 40.0% |
| ! | GACCTCATGGGATTTGTTTA+CGG | - | chr8.1:19992963-19992982 | MS.gene059958:intron | 40.0% |
| ! | GCACATCAGACACATGATTT+TGG | + | chr8.1:19993392-19993411 | None:intergenic | 40.0% |
| ! | GCAGCTTTTCATTTCATCGA+TGG | - | chr8.1:19992918-19992937 | MS.gene059958:intron | 40.0% |
| ! | GCTGCAGCATTTCCTTTTAT+GGG | - | chr8.1:19995073-19995092 | MS.gene059958:intron | 40.0% |
| ! | GGTGACTTCGTAAACTTGTT+AGG | - | chr8.1:19995094-19995113 | MS.gene059958:intron | 40.0% |
| ! | TGCTGCAGCATTTCCTTTTA+TGG | - | chr8.1:19995072-19995091 | MS.gene059958:intron | 40.0% |
| !! | TGATAATGGTTCCATTGGGT+TGG | - | chr8.1:19992832-19992851 | MS.gene059958:CDS | 40.0% |
| AACATGGGTTTCATCCTCCT+TGG | - | chr8.1:19993647-19993666 | MS.gene059958:CDS | 45.0% | |
| CAGATTCATGGCAACAAGTG+GGG | - | chr8.1:19992757-19992776 | MS.gene059958:CDS | 45.0% | |
| CTAGAACAGAGAAGAAGGTG+TGG | - | chr8.1:19995188-19995207 | MS.gene059958:intron | 45.0% | |
| GAACCGAAGAGCTGAAATTG+TGG | + | chr8.1:19995257-19995276 | None:intergenic | 45.0% | |
| GACCCTTCTTCTTGGAAACA+TGG | - | chr8.1:19993631-19993650 | MS.gene059958:CDS | 45.0% | |
| GACCGTAAACAAATCCCATG+AGG | + | chr8.1:19992968-19992987 | None:intergenic | 45.0% | |
| GATCATGCTTGGGAACATGA+AGG | + | chr8.1:19995143-19995162 | None:intergenic | 45.0% | |
| GCAGATTCATGGCAACAAGT+GGG | - | chr8.1:19992756-19992775 | MS.gene059958:CDS | 45.0% | |
| GGTACCAATTCATGAGGCTT+TGG | - | chr8.1:19994949-19994968 | MS.gene059958:CDS | 45.0% | |
| GTCAGTGTTGCAGTCAAAGA+TGG | - | chr8.1:19993933-19993952 | MS.gene059958:CDS | 45.0% | |
| GTGTCCAAAGCCTCATGAAT+TGG | + | chr8.1:19994956-19994975 | None:intergenic | 45.0% | |
| TGCAGATTCATGGCAACAAG+TGG | - | chr8.1:19992755-19992774 | MS.gene059958:CDS | 45.0% | |
| TTCCTCATGTTCTTCACTGC+TGG | + | chr8.1:19994473-19994492 | None:intergenic | 45.0% | |
| ! | ATTGGCAAGGGTATGCATTC+AGG | - | chr8.1:19994989-19995008 | MS.gene059958:CDS | 45.0% |
| ! | TTGGCAAGGGTATGCATTCA+GGG | - | chr8.1:19994990-19995009 | MS.gene059958:CDS | 45.0% |
| ! | TTGGTAACAGGCTTCAACTG+CGG | - | chr8.1:19992786-19992805 | MS.gene059958:CDS | 45.0% |
| !!! | GTCCGTCCTCATTTTTTGAG+TGG | - | chr8.1:19994825-19994844 | MS.gene059958:CDS | 45.0% |
| AGCCAGCAGTGAAGAACATG+AGG | - | chr8.1:19994468-19994487 | MS.gene059958:intron | 50.0% | |
| ATACCCCATGTCCAACCCAA+TGG | + | chr8.1:19992846-19992865 | None:intergenic | 50.0% | |
| ATGGGTTTCATCCTCCTTGG+AGG | - | chr8.1:19993650-19993669 | MS.gene059958:CDS | 50.0% | |
| CTTGGGAACATGAAGGTGAG+AGG | + | chr8.1:19995136-19995155 | None:intergenic | 50.0% | |
| GGACACGACACAACACGTAT+CGG | + | chr8.1:19994723-19994742 | None:intergenic | 50.0% | |
| TAACAGGCTTCAACTGCGGT+TGG | - | chr8.1:19992790-19992809 | MS.gene059958:CDS | 50.0% | |
| TGGCATGCTTCCTGAGATAC+AGG | - | chr8.1:19994168-19994187 | MS.gene059958:CDS | 50.0% | |
| TTTCATCCTCCTTGGAGGCA+AGG | - | chr8.1:19993655-19993674 | MS.gene059958:CDS | 50.0% | |
| ! | CAGAGAAGAAGGTGTGGCAT+TGG | - | chr8.1:19995194-19995213 | MS.gene059958:intron | 50.0% |
| ! | TATCTCAGGAAGCATGCCAC+TGG | + | chr8.1:19994167-19994186 | None:intergenic | 50.0% |
| ! | TGGCAAGGGTATGCATTCAG+GGG | - | chr8.1:19994991-19995010 | MS.gene059958:CDS | 50.0% |
| !! | GCAACAAGTGGGGTTGATGT+TGG | - | chr8.1:19992767-19992786 | MS.gene059958:CDS | 50.0% |
| !! | GGTTCCATTGGGTTGGACAT+GGG | - | chr8.1:19992839-19992858 | MS.gene059958:CDS | 50.0% |
| !! | GTGGGGTTGATGTTGGTAAC+AGG | - | chr8.1:19992774-19992793 | MS.gene059958:CDS | 50.0% |
| !! | GTTCCATTGGGTTGGACATG+GGG | - | chr8.1:19992840-19992859 | MS.gene059958:CDS | 50.0% |
| !! | TGGTTCCATTGGGTTGGACA+TGG | - | chr8.1:19992838-19992857 | MS.gene059958:CDS | 50.0% |
| CCTTAAGTGCCTTGCCTCCA+AGG | + | chr8.1:19993667-19993686 | None:intergenic | 55.0% | |
| GACGGACACTAGACACGACA+CGG | + | chr8.1:19994812-19994831 | None:intergenic | 55.0% | |
| TAAGTGCCTTGCCTCCAAGG+AGG | + | chr8.1:19993664-19993683 | None:intergenic | 55.0% | |
| TAGACACGACACGGACACGT+CGG | + | chr8.1:19994803-19994822 | None:intergenic | 55.0% | |
| ! | AGGAAGCATGCCACTGGTGT+TGG | + | chr8.1:19994161-19994180 | None:intergenic | 55.0% |
| ! | CCTTGGAGGCAAGGCACTTA+AGG | - | chr8.1:19993664-19993683 | MS.gene059958:CDS | 55.0% |
| !! | CACTGCTGGCTTACGTAGAG+TGG | + | chr8.1:19994459-19994478 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 19992481 | 19995321 | 19992481 | ID=MS.gene059958 |
| chr8.1 | mRNA | 19992481 | 19995321 | 19992481 | ID=MS.gene059958.t1;Parent=MS.gene059958 |
| chr8.1 | exon | 19995198 | 19995321 | 19995198 | ID=MS.gene059958.t1.exon1;Parent=MS.gene059958.t1 |
| chr8.1 | CDS | 19995198 | 19995321 | 19995198 | ID=cds.MS.gene059958.t1;Parent=MS.gene059958.t1 |
| chr8.1 | exon | 19994818 | 19995042 | 19994818 | ID=MS.gene059958.t1.exon2;Parent=MS.gene059958.t1 |
| chr8.1 | CDS | 19994818 | 19995042 | 19994818 | ID=cds.MS.gene059958.t1;Parent=MS.gene059958.t1 |
| chr8.1 | exon | 19994117 | 19994211 | 19994117 | ID=MS.gene059958.t1.exon3;Parent=MS.gene059958.t1 |
| chr8.1 | CDS | 19994117 | 19994211 | 19994117 | ID=cds.MS.gene059958.t1;Parent=MS.gene059958.t1 |
| chr8.1 | exon | 19993848 | 19994034 | 19993848 | ID=MS.gene059958.t1.exon4;Parent=MS.gene059958.t1 |
| chr8.1 | CDS | 19993848 | 19994034 | 19993848 | ID=cds.MS.gene059958.t1;Parent=MS.gene059958.t1 |
| chr8.1 | exon | 19993613 | 19993737 | 19993613 | ID=MS.gene059958.t1.exon5;Parent=MS.gene059958.t1 |
| chr8.1 | CDS | 19993613 | 19993737 | 19993613 | ID=cds.MS.gene059958.t1;Parent=MS.gene059958.t1 |
| chr8.1 | exon | 19993132 | 19993347 | 19993132 | ID=MS.gene059958.t1.exon6;Parent=MS.gene059958.t1 |
| chr8.1 | CDS | 19993132 | 19993347 | 19993132 | ID=cds.MS.gene059958.t1;Parent=MS.gene059958.t1 |
| chr8.1 | exon | 19992481 | 19992861 | 19992481 | ID=MS.gene059958.t1.exon7;Parent=MS.gene059958.t1 |
| chr8.1 | CDS | 19992481 | 19992861 | 19992481 | ID=cds.MS.gene059958.t1;Parent=MS.gene059958.t1 |
| Gene Sequence |
| Protein sequence |
