Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067533.t1 | XP_013459262.1 | 94.9 | 334 | 17 | 0 | 1 | 334 | 1 | 334 | 9.20E-188 | 666 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067533.t1 | P52839 | 49.8 | 327 | 158 | 2 | 8 | 334 | 4 | 324 | 1.8e-91 | 337.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067533.t1 | A0A072UW61 | 94.9 | 334 | 17 | 0 | 1 | 334 | 1 | 334 | 6.6e-188 | 666.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene067533 | MS.gene53169 | PPI |
| MS.gene55382 | MS.gene067533 | PPI |
| MS.gene067533 | MS.gene99693 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067533.t1 | MTR_3g435130 | 94.910 | 334 | 17 | 0 | 1 | 334 | 1 | 334 | 0.0 | 660 |
| MS.gene067533.t1 | MTR_8g066220 | 71.856 | 334 | 93 | 1 | 1 | 334 | 1 | 333 | 0.0 | 511 |
| MS.gene067533.t1 | MTR_0071s0010 | 72.121 | 330 | 92 | 0 | 5 | 334 | 4 | 333 | 0.0 | 510 |
| MS.gene067533.t1 | MTR_3g046670 | 72.121 | 330 | 92 | 0 | 5 | 334 | 4 | 333 | 0.0 | 510 |
| MS.gene067533.t1 | MTR_8g066210 | 70.659 | 334 | 82 | 2 | 1 | 334 | 1 | 318 | 6.62e-174 | 485 |
| MS.gene067533.t1 | MTR_3g013500 | 51.572 | 318 | 153 | 1 | 17 | 334 | 21 | 337 | 2.50e-117 | 342 |
| MS.gene067533.t1 | MTR_7g007710 | 49.221 | 321 | 157 | 3 | 18 | 334 | 14 | 332 | 2.16e-113 | 332 |
| MS.gene067533.t1 | MTR_7g007680 | 47.812 | 320 | 158 | 4 | 18 | 334 | 20 | 333 | 3.85e-108 | 320 |
| MS.gene067533.t1 | MTR_8g040820 | 47.115 | 312 | 160 | 4 | 27 | 334 | 34 | 344 | 1.77e-104 | 310 |
| MS.gene067533.t1 | MTR_8g035720 | 45.593 | 329 | 175 | 2 | 10 | 334 | 78 | 406 | 1.64e-101 | 305 |
| MS.gene067533.t1 | MTR_8g066280 | 72.872 | 188 | 51 | 0 | 147 | 334 | 22 | 209 | 2.41e-100 | 294 |
| MS.gene067533.t1 | MTR_8g040490 | 44.373 | 311 | 169 | 3 | 27 | 334 | 34 | 343 | 2.99e-97 | 293 |
| MS.gene067533.t1 | MTR_8g040430 | 42.433 | 337 | 178 | 5 | 3 | 334 | 20 | 345 | 1.02e-95 | 288 |
| MS.gene067533.t1 | MTR_8g040520 | 46.984 | 315 | 159 | 4 | 17 | 327 | 24 | 334 | 2.15e-94 | 284 |
| MS.gene067533.t1 | MTR_3g434790 | 68.750 | 192 | 60 | 0 | 143 | 334 | 43 | 234 | 1.88e-93 | 278 |
| MS.gene067533.t1 | MTR_3g434790 | 71.930 | 57 | 15 | 1 | 1 | 56 | 1 | 57 | 6.99e-21 | 90.1 |
| MS.gene067533.t1 | MTR_8g041790 | 44.164 | 317 | 153 | 6 | 23 | 334 | 28 | 325 | 1.01e-91 | 277 |
| MS.gene067533.t1 | MTR_8g014380 | 43.003 | 293 | 126 | 5 | 16 | 306 | 22 | 275 | 5.76e-79 | 243 |
| MS.gene067533.t1 | MTR_8g040250 | 40.909 | 308 | 144 | 5 | 24 | 327 | 15 | 288 | 4.87e-78 | 241 |
| MS.gene067533.t1 | MTR_8g040820 | 47.945 | 219 | 110 | 3 | 120 | 334 | 27 | 245 | 1.85e-73 | 227 |
| MS.gene067533.t1 | MTR_8g040430 | 44.749 | 219 | 117 | 2 | 120 | 334 | 27 | 245 | 5.10e-66 | 208 |
| MS.gene067533.t1 | MTR_8g040730 | 49.724 | 181 | 82 | 5 | 78 | 253 | 39 | 215 | 1.40e-45 | 162 |
| MS.gene067533.t1 | MTR_8g040730 | 42.331 | 163 | 88 | 3 | 17 | 177 | 338 | 496 | 1.68e-37 | 140 |
| MS.gene067533.t1 | MTR_8g040710 | 46.980 | 149 | 77 | 1 | 178 | 324 | 134 | 282 | 7.73e-40 | 142 |
| MS.gene067533.t1 | MTR_8g066190 | 57.009 | 107 | 28 | 1 | 228 | 334 | 4 | 92 | 1.03e-31 | 114 |
| MS.gene067533.t1 | MTR_8g040315 | 41.221 | 131 | 76 | 1 | 204 | 334 | 3 | 132 | 5.63e-26 | 101 |
| MS.gene067533.t1 | MTR_8g066200 | 80.556 | 36 | 7 | 0 | 152 | 187 | 25 | 60 | 3.55e-15 | 69.7 |
| MS.gene067533.t1 | MTR_8g040410 | 33.708 | 89 | 41 | 1 | 218 | 306 | 75 | 145 | 2.76e-11 | 61.2 |
| MS.gene067533.t1 | MTR_8g040410 | 46.667 | 60 | 31 | 1 | 66 | 124 | 21 | 80 | 8.73e-11 | 59.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067533.t1 | AT3G45070 | 50.467 | 321 | 156 | 3 | 15 | 334 | 5 | 323 | 6.89e-112 | 328 |
| MS.gene067533.t1 | AT3G45070 | 50.467 | 321 | 156 | 3 | 15 | 334 | 10 | 328 | 7.14e-112 | 328 |
| MS.gene067533.t1 | AT3G45070 | 50.467 | 321 | 156 | 3 | 15 | 334 | 37 | 355 | 9.08e-112 | 329 |
| MS.gene067533.t1 | AT5G07010 | 48.000 | 325 | 167 | 2 | 11 | 334 | 33 | 356 | 1.01e-110 | 326 |
| MS.gene067533.t1 | AT2G03760 | 49.541 | 327 | 159 | 2 | 8 | 334 | 4 | 324 | 8.17e-110 | 323 |
| MS.gene067533.t1 | AT3G45080 | 50.000 | 322 | 157 | 4 | 15 | 334 | 10 | 329 | 1.38e-106 | 315 |
| MS.gene067533.t1 | AT5G07000 | 47.975 | 321 | 163 | 3 | 17 | 334 | 25 | 344 | 2.04e-104 | 310 |
| MS.gene067533.t1 | AT1G13420 | 50.641 | 312 | 146 | 4 | 25 | 334 | 26 | 331 | 3.97e-104 | 308 |
| MS.gene067533.t1 | AT2G03770 | 47.205 | 322 | 161 | 2 | 13 | 334 | 10 | 322 | 1.63e-102 | 304 |
| MS.gene067533.t1 | AT2G03750 | 45.062 | 324 | 175 | 3 | 11 | 334 | 30 | 350 | 5.53e-97 | 291 |
| MS.gene067533.t1 | AT4G26280 | 47.134 | 314 | 147 | 2 | 15 | 327 | 7 | 302 | 2.08e-96 | 288 |
| MS.gene067533.t1 | AT5G43690 | 45.593 | 329 | 174 | 4 | 9 | 334 | 5 | 331 | 2.40e-96 | 289 |
| MS.gene067533.t1 | AT1G28170 | 46.626 | 326 | 167 | 6 | 11 | 334 | 6 | 326 | 1.10e-93 | 282 |
| MS.gene067533.t1 | AT2G14920 | 46.032 | 315 | 162 | 4 | 25 | 334 | 22 | 333 | 4.68e-93 | 280 |
| MS.gene067533.t1 | AT1G18590 | 44.654 | 318 | 162 | 5 | 22 | 332 | 31 | 341 | 8.95e-92 | 278 |
| MS.gene067533.t1 | AT1G74100 | 43.396 | 318 | 166 | 5 | 22 | 332 | 23 | 333 | 3.86e-89 | 271 |
| MS.gene067533.t1 | AT1G13430 | 44.985 | 329 | 159 | 5 | 25 | 334 | 26 | 351 | 6.50e-86 | 263 |
| MS.gene067533.t1 | AT1G74090 | 45.031 | 322 | 158 | 7 | 22 | 331 | 35 | 349 | 1.07e-81 | 252 |
| MS.gene067533.t1 | AT2G27570 | 41.562 | 320 | 131 | 4 | 15 | 334 | 10 | 273 | 4.31e-81 | 248 |
Find 55 sgRNAs with CRISPR-Local
Find 76 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCATGTTCTTGTTCCCTTCT+TGG | 0.117710 | 3.2:-26463495 | MS.gene067533:CDS |
| TCATCTTCTCGCAAGTATTT+TGG | 0.165419 | 3.2:+26463800 | None:intergenic |
| CCCTTTAGATTCTTCATCTT+TGG | 0.199939 | 3.2:+26463064 | None:intergenic |
| CACTATCATTGAAGAGAAAT+TGG | 0.223270 | 3.2:-26462874 | MS.gene067533:CDS |
| TGACTTTGTTTGGACCCTTT+TGG | 0.231735 | 3.2:-26463220 | MS.gene067533:CDS |
| ACTAGAGGGTTGACTTTGTT+TGG | 0.232668 | 3.2:-26463230 | MS.gene067533:CDS |
| CTAAGAGGATATCTGTATTA+AGG | 0.241661 | 3.2:+26463633 | None:intergenic |
| AGCCAAGTGGTACCTGATTT+AGG | 0.261740 | 3.2:+26463602 | None:intergenic |
| TTGGAGAGGATAATGAATTT+AGG | 0.273749 | 3.2:+26463435 | None:intergenic |
| GGGAGCATGTATTAGGTTAT+TGG | 0.275725 | 3.2:-26463199 | MS.gene067533:CDS |
| ACATACTACATGGCAAAATT+AGG | 0.277167 | 3.2:-26463842 | None:intergenic |
| CAAACCTTACCATTAGAAAA+AGG | 0.343026 | 3.2:-26463749 | MS.gene067533:CDS |
| TAAGAGGATATCTGTATTAA+GGG | 0.343458 | 3.2:+26463634 | None:intergenic |
| CCAAAGATGAAGAATCTAAA+GGG | 0.366499 | 3.2:-26463064 | MS.gene067533:CDS |
| GATTCTTCATCTTTGGTGAA+TGG | 0.376756 | 3.2:+26463071 | None:intergenic |
| AGTGAAGCAAAAGTGTCTTT+AGG | 0.383696 | 3.2:+26463326 | None:intergenic |
| ACCTTGATATTGATGAAAGT+TGG | 0.415905 | 3.2:+26463715 | None:intergenic |
| CGCCGTGGCCAAGTTGGAGA+TGG | 0.430605 | 3.2:-26462936 | MS.gene067533:CDS |
| ACCTAATACATGCTCCCAAA+AGG | 0.431604 | 3.2:+26463205 | None:intergenic |
| AACTTGGAGGTTAATAAGAC+TGG | 0.431966 | 3.2:-26462996 | MS.gene067533:CDS |
| GAGGATAATGAATTTAGGTT+AGG | 0.436457 | 3.2:+26463440 | None:intergenic |
| ACCAACTTTCATCAATATCA+AGG | 0.443238 | 3.2:-26463716 | MS.gene067533:CDS |
| AGGTTATTGGAAGGAAAGCT+TGG | 0.478285 | 3.2:-26463186 | MS.gene067533:CDS |
| TTAGTTACTACTCCTAAATC+AGG | 0.484354 | 3.2:-26463614 | MS.gene067533:CDS |
| CTCCATCTCCAACTTGGCCA+CGG | 0.484719 | 3.2:+26462934 | None:intergenic |
| ACCAAAGATGAAGAATCTAA+AGG | 0.486055 | 3.2:-26463065 | MS.gene067533:CDS |
| TGAGAAGCTGAGCAACTTGG+AGG | 0.486499 | 3.2:-26463009 | MS.gene067533:CDS |
| AAGACTGGGAAAGTGTCATT+TGG | 0.496808 | 3.2:-26462981 | MS.gene067533:CDS |
| AAAAGAGTCAAGTTGTAAAG+TGG | 0.513844 | 3.2:-26463366 | MS.gene067533:CDS |
| CATAATCTTTATCATAGTAA+AGG | 0.520399 | 3.2:+26463465 | None:intergenic |
| CCTAATACATGCTCCCAAAA+GGG | 0.524183 | 3.2:+26463206 | None:intergenic |
| GAAGAGAAATTGGTTAAACA+TGG | 0.527589 | 3.2:-26462864 | MS.gene067533:CDS |
| AAGAGAAATTGGTTAAACAT+GGG | 0.528788 | 3.2:-26462863 | MS.gene067533:CDS |
| GTAAAGGTCAATCTCCAAGA+AGG | 0.540311 | 3.2:+26463481 | None:intergenic |
| CTCCTAAATCAGGTACCACT+TGG | 0.544104 | 3.2:-26463604 | MS.gene067533:CDS |
| TTTGCGGTTTATCAAAGCAA+AGG | 0.554087 | 3.2:+26463568 | None:intergenic |
| ATTTAGGAGTAGTAACTAAG+AGG | 0.562406 | 3.2:+26463618 | None:intergenic |
| ATGTGTGTTGCAAAGAGTCT+TGG | 0.574239 | 3.2:+26463416 | None:intergenic |
| TTTGACAAGATAAAACACCT+TGG | 0.581098 | 3.2:+26463669 | None:intergenic |
| TAAAGGTCAATCTCCAAGAA+GGG | 0.583924 | 3.2:+26463482 | None:intergenic |
| TGACTTAGGCAAAGAATGCA+AGG | 0.596486 | 3.2:-26463780 | MS.gene067533:CDS |
| ACTATGGCATTTCTCAAACA+AGG | 0.596868 | 3.2:-26463306 | MS.gene067533:CDS |
| GCATGTATTAGGTTATTGGA+AGG | 0.598201 | 3.2:-26463195 | MS.gene067533:CDS |
| AAGAAGGGAACAAGAACATG+AGG | 0.606385 | 3.2:+26463497 | None:intergenic |
| ACTTGGAGGTTAATAAGACT+GGG | 0.607784 | 3.2:-26462995 | MS.gene067533:CDS |
| AAGGTAAGATCACAAAGTAG+TGG | 0.608348 | 3.2:-26463287 | MS.gene067533:CDS |
| TGAGGGTTTGTAGTGAGCAA+AGG | 0.620845 | 3.2:+26463515 | None:intergenic |
| CAAAGATGAAGAATCTAAAG+GGG | 0.634971 | 3.2:-26463063 | MS.gene067533:CDS |
| AAGCTTGGAAAGATCAAACA+AGG | 0.649373 | 3.2:-26463171 | MS.gene067533:CDS |
| AGATGAAGAATCTAAAGGGG+TGG | 0.649973 | 3.2:-26463060 | MS.gene067533:CDS |
| GGTTAATGCTTTGAGCCAAG+TGG | 0.653823 | 3.2:+26463589 | None:intergenic |
| ATTGGCACAAGGATTCTCCA+AGG | 0.668598 | 3.2:-26463686 | MS.gene067533:CDS |
| AGAAGGGAACAAGAACATGA+GGG | 0.690046 | 3.2:+26463498 | None:intergenic |
| TACTTGCGAGAAGATGACTT+AGG | 0.695332 | 3.2:-26463794 | MS.gene067533:CDS |
| TGTTGCAAAGAGTCTTGGAG+AGG | 0.748134 | 3.2:+26463421 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CATAATCTTTATCATAGTAA+AGG | + | chr3.2:26463222-26463241 | None:intergenic | 20.0% |
| !!! | AGCTTTTTCAAATGAAAATA+AGG | + | chr3.2:26463574-26463593 | None:intergenic | 20.0% |
| !!! | CTTTTGAAAATTTTACTAGA+GGG | - | chr3.2:26463440-26463459 | MS.gene067533:CDS | 20.0% |
| !!! | GAATATTTTGATGTTTTTTG+CGG | + | chr3.2:26463135-26463154 | None:intergenic | 20.0% |
| !!! | TCTTTTGAAAATTTTACTAG+AGG | - | chr3.2:26463439-26463458 | MS.gene067533:CDS | 20.0% |
| ! | AAGAGAAATTGGTTAAACAT+GGG | - | chr3.2:26463821-26463840 | MS.gene067533:CDS | 25.0% |
| ! | TAAGAGGATATCTGTATTAA+GGG | + | chr3.2:26463053-26463072 | None:intergenic | 25.0% |
| !! | TTCATCAATATCAAGGTTTT+TGG | - | chr3.2:26462975-26462994 | MS.gene067533:CDS | 25.0% |
| !! | TTTTCAAAAGACTCTTCTAA+TGG | + | chr3.2:26463430-26463449 | None:intergenic | 25.0% |
| ACCAAAGATGAAGAATCTAA+AGG | - | chr3.2:26463619-26463638 | MS.gene067533:CDS | 30.0% | |
| ACCAACTTTCATCAATATCA+AGG | - | chr3.2:26462968-26462987 | MS.gene067533:CDS | 30.0% | |
| ACCTTGATATTGATGAAAGT+TGG | + | chr3.2:26462972-26462991 | None:intergenic | 30.0% | |
| ATTTAGGAGTAGTAACTAAG+AGG | + | chr3.2:26463069-26463088 | None:intergenic | 30.0% | |
| CAAACCTTACCATTAGAAAA+AGG | - | chr3.2:26462935-26462954 | MS.gene067533:CDS | 30.0% | |
| CAAAGATGAAGAATCTAAAG+GGG | - | chr3.2:26463621-26463640 | MS.gene067533:CDS | 30.0% | |
| CACTATCATTGAAGAGAAAT+TGG | - | chr3.2:26463810-26463829 | MS.gene067533:CDS | 30.0% | |
| CCAAAGATGAAGAATCTAAA+GGG | - | chr3.2:26463620-26463639 | MS.gene067533:CDS | 30.0% | |
| CTAAGAGGATATCTGTATTA+AGG | + | chr3.2:26463054-26463073 | None:intergenic | 30.0% | |
| CTTACCATTAGAAAAAGGAT+GGG | - | chr3.2:26462940-26462959 | MS.gene067533:CDS | 30.0% | |
| GAAGAGAAATTGGTTAAACA+TGG | - | chr3.2:26463820-26463839 | MS.gene067533:CDS | 30.0% | |
| TTAGTTACTACTCCTAAATC+AGG | - | chr3.2:26463070-26463089 | MS.gene067533:CDS | 30.0% | |
| TTGGAGAGGATAATGAATTT+AGG | + | chr3.2:26463252-26463271 | None:intergenic | 30.0% | |
| TTTGACAAGATAAAACACCT+TGG | + | chr3.2:26463018-26463037 | None:intergenic | 30.0% | |
| ! | AAAAGAGTCAAGTTGTAAAG+TGG | - | chr3.2:26463318-26463337 | MS.gene067533:CDS | 30.0% |
| ! | CTTGACTCTTTTACAGATTT+TGG | + | chr3.2:26463310-26463329 | None:intergenic | 30.0% |
| ! | GAGGATAATGAATTTAGGTT+AGG | + | chr3.2:26463247-26463266 | None:intergenic | 30.0% |
| !! | CAATATCAAGGTTTTTGGAT+TGG | - | chr3.2:26462980-26462999 | MS.gene067533:CDS | 30.0% |
| !! | GATTTTGGCAACAAATCATA+TGG | + | chr3.2:26463295-26463314 | None:intergenic | 30.0% |
| !!! | GAAAAAGCTTGCTGAATTTT+TGG | - | chr3.2:26463585-26463604 | MS.gene067533:CDS | 30.0% |
| AACTTGGAGGTTAATAAGAC+TGG | - | chr3.2:26463688-26463707 | MS.gene067533:CDS | 35.0% | |
| AAGCTTGGAAAGATCAAACA+AGG | - | chr3.2:26463513-26463532 | MS.gene067533:CDS | 35.0% | |
| AAGGTAAGATCACAAAGTAG+TGG | - | chr3.2:26463397-26463416 | MS.gene067533:CDS | 35.0% | |
| ACTATGGCATTTCTCAAACA+AGG | - | chr3.2:26463378-26463397 | MS.gene067533:CDS | 35.0% | |
| ACTTGGAGGTTAATAAGACT+GGG | - | chr3.2:26463689-26463708 | MS.gene067533:CDS | 35.0% | |
| CCCTTTAGATTCTTCATCTT+TGG | + | chr3.2:26463623-26463642 | None:intergenic | 35.0% | |
| CCTTACCATTAGAAAAAGGA+TGG | - | chr3.2:26462939-26462958 | MS.gene067533:CDS | 35.0% | |
| GATTCTTCATCTTTGGTGAA+TGG | + | chr3.2:26463616-26463635 | None:intergenic | 35.0% | |
| GCATGTATTAGGTTATTGGA+AGG | - | chr3.2:26463489-26463508 | MS.gene067533:CDS | 35.0% | |
| TAAAGGTCAATCTCCAAGAA+GGG | + | chr3.2:26463205-26463224 | None:intergenic | 35.0% | |
| TTTGCGGTTTATCAAAGCAA+AGG | + | chr3.2:26463119-26463138 | None:intergenic | 35.0% | |
| ! | AAGACACTTTTGCTTCACTA+TGG | - | chr3.2:26463362-26463381 | MS.gene067533:CDS | 35.0% |
| ! | CCATCCTTTTTCTAATGGTA+AGG | + | chr3.2:26462942-26462961 | None:intergenic | 35.0% |
| ! | CTAACCCATCCTTTTTCTAA+TGG | + | chr3.2:26462947-26462966 | None:intergenic | 35.0% |
| ! | TCATCTTCTCGCAAGTATTT+TGG | + | chr3.2:26462887-26462906 | None:intergenic | 35.0% |
| !! | AGTGAAGCAAAAGTGTCTTT+AGG | + | chr3.2:26463361-26463380 | None:intergenic | 35.0% |
| AAGAAGGGAACAAGAACATG+AGG | + | chr3.2:26463190-26463209 | None:intergenic | 40.0% | |
| ACCTAATACATGCTCCCAAA+AGG | + | chr3.2:26463482-26463501 | None:intergenic | 40.0% | |
| AGAAGGGAACAAGAACATGA+GGG | + | chr3.2:26463189-26463208 | None:intergenic | 40.0% | |
| AGATGAAGAATCTAAAGGGG+TGG | - | chr3.2:26463624-26463643 | MS.gene067533:CDS | 40.0% | |
| AGGTTATTGGAAGGAAAGCT+TGG | - | chr3.2:26463498-26463517 | MS.gene067533:CDS | 40.0% | |
| ATGTGTGTTGCAAAGAGTCT+TGG | + | chr3.2:26463271-26463290 | None:intergenic | 40.0% | |
| CCTAATACATGCTCCCAAAA+GGG | + | chr3.2:26463481-26463500 | None:intergenic | 40.0% | |
| GTAAAGGTCAATCTCCAAGA+AGG | + | chr3.2:26463206-26463225 | None:intergenic | 40.0% | |
| TACTTGCGAGAAGATGACTT+AGG | - | chr3.2:26462890-26462909 | MS.gene067533:CDS | 40.0% | |
| TCATGTTCTTGTTCCCTTCT+TGG | - | chr3.2:26463189-26463208 | MS.gene067533:CDS | 40.0% | |
| TGACTTAGGCAAAGAATGCA+AGG | - | chr3.2:26462904-26462923 | MS.gene067533:CDS | 40.0% | |
| ! | ACTAGAGGGTTGACTTTGTT+TGG | - | chr3.2:26463454-26463473 | MS.gene067533:CDS | 40.0% |
| ! | GGGAGCATGTATTAGGTTAT+TGG | - | chr3.2:26463485-26463504 | MS.gene067533:CDS | 40.0% |
| !! | AACAATGCTTATTTTCGCCG+TGG | - | chr3.2:26463733-26463752 | MS.gene067533:CDS | 40.0% |
| !! | AAGACTGGGAAAGTGTCATT+TGG | - | chr3.2:26463703-26463722 | MS.gene067533:CDS | 40.0% |
| !! | GACTTTGTTTGGACCCTTTT+GGG | - | chr3.2:26463465-26463484 | MS.gene067533:CDS | 40.0% |
| !! | TGACTTTGTTTGGACCCTTT+TGG | - | chr3.2:26463464-26463483 | MS.gene067533:CDS | 40.0% |
| !! | TTTTGAGAAGCTGAGCAACT+TGG | - | chr3.2:26463672-26463691 | MS.gene067533:CDS | 40.0% |
| !!! | AAGGTTTTTGGATTGGCACA+AGG | - | chr3.2:26462987-26463006 | MS.gene067533:CDS | 40.0% |
| AGCCAAGTGGTACCTGATTT+AGG | + | chr3.2:26463085-26463104 | None:intergenic | 45.0% | |
| ATTGGCACAAGGATTCTCCA+AGG | - | chr3.2:26462998-26463017 | MS.gene067533:CDS | 45.0% | |
| CTCCTAAATCAGGTACCACT+TGG | - | chr3.2:26463080-26463099 | MS.gene067533:CDS | 45.0% | |
| TGAGGGTTTGTAGTGAGCAA+AGG | + | chr3.2:26463172-26463191 | None:intergenic | 45.0% | |
| TGTTGCAAAGAGTCTTGGAG+AGG | + | chr3.2:26463266-26463285 | None:intergenic | 45.0% | |
| ! | GCTTTTCTCCATCTCCAACT+TGG | + | chr3.2:26463759-26463778 | None:intergenic | 45.0% |
| ! | GGTTAATGCTTTGAGCCAAG+TGG | + | chr3.2:26463098-26463117 | None:intergenic | 45.0% |
| !! | CCCTTTTGGGAGCATGTATT+AGG | - | chr3.2:26463478-26463497 | MS.gene067533:CDS | 45.0% |
| TGAGAAGCTGAGCAACTTGG+AGG | - | chr3.2:26463675-26463694 | MS.gene067533:CDS | 50.0% | |
| ! | TATTTTCGCCGTGGCCAAGT+TGG | - | chr3.2:26463742-26463761 | MS.gene067533:CDS | 50.0% |
| CTCCATCTCCAACTTGGCCA+CGG | + | chr3.2:26463753-26463772 | None:intergenic | 55.0% | |
| ! | CGCCGTGGCCAAGTTGGAGA+TGG | - | chr3.2:26463748-26463767 | MS.gene067533:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 26462851 | 26463855 | 26462851 | ID=MS.gene067533 |
| chr3.2 | mRNA | 26462851 | 26463855 | 26462851 | ID=MS.gene067533.t1;Parent=MS.gene067533 |
| chr3.2 | exon | 26462851 | 26463855 | 26462851 | ID=MS.gene067533.t1.exon1;Parent=MS.gene067533.t1 |
| chr3.2 | CDS | 26462851 | 26463855 | 26462851 | ID=cds.MS.gene067533.t1;Parent=MS.gene067533.t1 |
| Gene Sequence |
| Protein sequence |
