Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067728.t1 | PNX73002.1 | 38.2 | 843 | 173 | 8 | 109 | 692 | 1 | 754 | 1.70E-130 | 476.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067728.t1 | Q9SZL8 | 32.8 | 186 | 114 | 6 | 109 | 287 | 77 | 258 | 3.9e-14 | 81.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067728.t1 | A0A2K3L384 | 38.2 | 843 | 173 | 8 | 109 | 692 | 1 | 754 | 1.3e-130 | 476.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene067728.t1 | TF | FAR1 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene060268 | MS.gene067728 | 0.900453 | 7.21E-78 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067728.t1 | MTR_3g080590 | 87.742 | 155 | 19 | 0 | 1 | 155 | 1 | 155 | 1.71e-79 | 251 |
| MS.gene067728.t1 | MTR_7g446520 | 46.114 | 193 | 89 | 2 | 98 | 290 | 81 | 258 | 6.64e-45 | 164 |
| MS.gene067728.t1 | MTR_0645s0010 | 67.593 | 108 | 29 | 3 | 288 | 395 | 24 | 125 | 1.01e-35 | 131 |
| MS.gene067728.t1 | MTR_7g446480 | 52.679 | 112 | 53 | 0 | 179 | 290 | 140 | 251 | 1.08e-31 | 126 |
| MS.gene067728.t1 | MTR_7g028855 | 45.395 | 152 | 78 | 2 | 98 | 245 | 113 | 263 | 2.58e-30 | 125 |
| MS.gene067728.t1 | MTR_7g446510 | 51.786 | 112 | 54 | 0 | 179 | 290 | 155 | 266 | 7.24e-29 | 118 |
| MS.gene067728.t1 | MTR_1g070355 | 31.818 | 176 | 117 | 2 | 105 | 277 | 74 | 249 | 6.52e-21 | 97.8 |
| MS.gene067728.t1 | MTR_5g076070 | 28.415 | 183 | 116 | 3 | 85 | 264 | 45 | 215 | 1.81e-20 | 92.8 |
| MS.gene067728.t1 | MTR_6g022080 | 27.439 | 164 | 116 | 1 | 104 | 264 | 84 | 247 | 4.05e-18 | 85.1 |
| MS.gene067728.t1 | MTR_8g035530 | 46.753 | 77 | 39 | 1 | 92 | 168 | 1 | 75 | 1.19e-16 | 75.5 |
| MS.gene067728.t1 | MTR_8g468460 | 40.000 | 100 | 57 | 2 | 309 | 408 | 9 | 105 | 2.00e-13 | 67.4 |
| MS.gene067728.t1 | MTR_0402s0040 | 29.885 | 174 | 117 | 5 | 108 | 278 | 29 | 200 | 3.58e-13 | 73.2 |
| MS.gene067728.t1 | MTR_3g450850 | 29.651 | 172 | 109 | 4 | 111 | 270 | 53 | 224 | 6.20e-13 | 71.2 |
| MS.gene067728.t1 | MTR_4g035820 | 29.121 | 182 | 120 | 4 | 111 | 285 | 81 | 260 | 2.27e-12 | 70.9 |
| MS.gene067728.t1 | MTR_6g051425 | 28.261 | 184 | 121 | 5 | 112 | 287 | 24 | 204 | 5.80e-12 | 68.2 |
| MS.gene067728.t1 | MTR_1g008290 | 31.034 | 116 | 75 | 2 | 173 | 288 | 21 | 131 | 7.12e-11 | 61.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067728.t1 | AT5G28530 | 33.898 | 177 | 111 | 4 | 111 | 282 | 61 | 236 | 5.77e-19 | 92.0 |
| MS.gene067728.t1 | AT5G28530 | 33.898 | 177 | 111 | 4 | 111 | 282 | 61 | 236 | 5.88e-19 | 92.0 |
| MS.gene067728.t1 | AT5G28530 | 33.898 | 177 | 111 | 4 | 111 | 282 | 61 | 236 | 7.19e-19 | 91.7 |
| MS.gene067728.t1 | AT5G28530 | 33.898 | 177 | 111 | 4 | 111 | 282 | 61 | 236 | 7.26e-19 | 91.7 |
| MS.gene067728.t1 | AT5G28530 | 33.898 | 177 | 111 | 4 | 111 | 282 | 61 | 236 | 7.26e-19 | 91.7 |
| MS.gene067728.t1 | AT4G38180 | 30.337 | 267 | 170 | 9 | 33 | 290 | 3 | 262 | 1.20e-15 | 81.6 |
| MS.gene067728.t1 | AT1G10240 | 31.928 | 166 | 98 | 6 | 111 | 265 | 54 | 215 | 2.43e-12 | 70.9 |
| MS.gene067728.t1 | AT1G10240 | 31.928 | 166 | 98 | 6 | 111 | 265 | 54 | 215 | 2.43e-12 | 70.9 |
Find 132 sgRNAs with CRISPR-Local
Find 217 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAACTGATCCACCATTATT+TGG | 0.155571 | 4.2:+49114931 | None:intergenic |
| TCAATGTTGATTGTGATATT+TGG | 0.171428 | 4.2:+49115168 | None:intergenic |
| TCACTCAATTTACGGTAATT+AGG | 0.235603 | 4.2:+49117242 | None:intergenic |
| CCCATAGTTTCTCAATGTTT+TGG | 0.242135 | 4.2:+49114656 | None:intergenic |
| TATCAACTTCACTCAATTTA+CGG | 0.276736 | 4.2:+49117234 | None:intergenic |
| ATCACTCGCAACAAATTTAC+TGG | 0.280329 | 4.2:+49115704 | None:intergenic |
| TAACACCATACCCAACATTA+TGG | 0.313783 | 4.2:+49114980 | None:intergenic |
| AGGACTTGGGTTTATCAAAA+AGG | 0.326599 | 4.2:-49117126 | MS.gene067728:CDS |
| CAGTGTTAGAATGTGATGAT+AGG | 0.338987 | 4.2:+49114884 | None:intergenic |
| TGATAAACCCAAGTCCTTCA+TGG | 0.346028 | 4.2:+49117132 | None:intergenic |
| AGATGATGATATAAGGGATA+TGG | 0.347376 | 4.2:-49117579 | MS.gene067728:CDS |
| ACGACTTTGTTCGTACGATT+TGG | 0.356788 | 4.2:-49117331 | MS.gene067728:CDS |
| ACACCAATTCCAGCAAGTTC+TGG | 0.360337 | 4.2:+49115549 | None:intergenic |
| ATGTGACAGATGATGATATA+AGG | 0.367162 | 4.2:-49117586 | MS.gene067728:CDS |
| CTCGGAACATTGTGTGTTCC+AGG | 0.370631 | 4.2:+49114835 | None:intergenic |
| TAAGAGCGCAAGTGATTATA+AGG | 0.371814 | 4.2:-49115805 | MS.gene067728:CDS |
| TGTAAGAACATGTCATATCT+TGG | 0.387474 | 4.2:-49117180 | MS.gene067728:CDS |
| TGTTCTAATTGTAGAAATCC+TGG | 0.392101 | 4.2:-49115591 | MS.gene067728:CDS |
| CACTATGGGGTGCCAAATAA+TGG | 0.393131 | 4.2:-49114943 | MS.gene067728:CDS |
| ACTGGAACACACAATGTTCC+TGG | 0.398163 | 4.2:-49114853 | MS.gene067728:CDS |
| ATCATTCGCAACAAATTTGT+TGG | 0.403036 | 4.2:+49115677 | None:intergenic |
| TCTAACACTGCTCTGCATAC+TGG | 0.407068 | 4.2:-49114871 | MS.gene067728:CDS |
| ATATAATTTCACGGATCATC+AGG | 0.409639 | 4.2:-49117099 | MS.gene067728:CDS |
| GATTATAAGGAGGCTCTAGA+AGG | 0.413898 | 4.2:-49115792 | MS.gene067728:CDS |
| GATTCATTATCAGACTCAAT+AGG | 0.414121 | 4.2:+49115495 | None:intergenic |
| GCACTGGTATTACACGTAAG+AGG | 0.418801 | 4.2:-49115287 | MS.gene067728:CDS |
| AACAAATACAAGCACTAGAA+AGG | 0.422563 | 4.2:-49115208 | MS.gene067728:CDS |
| TGTCCAGAACTTGCTGGAAT+TGG | 0.422787 | 4.2:-49115552 | MS.gene067728:CDS |
| AAAGTTTAAAGATGTCAAAA+AGG | 0.436388 | 4.2:-49116193 | MS.gene067728:CDS |
| TACGGTAATTAGGCATCAAA+TGG | 0.442752 | 4.2:+49117252 | None:intergenic |
| CGCAGAACAATTAGTTCGAA+TGG | 0.445789 | 4.2:+49117370 | None:intergenic |
| AAGGGTGGCCATGAAGGACT+TGG | 0.449428 | 4.2:-49117140 | MS.gene067728:CDS |
| TAAATTTGTTGCGAGTGATA+AGG | 0.460501 | 4.2:-49115700 | MS.gene067728:CDS |
| AAATGGACATGACGAGGATA+AGG | 0.462491 | 4.2:-49115727 | MS.gene067728:CDS |
| GTAAGAACATGTCATATCTT+GGG | 0.464989 | 4.2:-49117179 | MS.gene067728:CDS |
| AAAGGGAAAGAGAACTTTGA+TGG | 0.466032 | 4.2:-49117626 | MS.gene067728:CDS |
| GCGTCAATTAGTATGCAATA+AGG | 0.467578 | 4.2:-49117444 | MS.gene067728:CDS |
| AACGCAAAGGAGCTAATTCA+TGG | 0.469712 | 4.2:+49117279 | None:intergenic |
| AGTGTTAGAATGTGATGATA+GGG | 0.470693 | 4.2:+49114885 | None:intergenic |
| TTCGAATGGTTAGCGTAGAT+CGG | 0.471186 | 4.2:+49117384 | None:intergenic |
| AATAGCCGTCATGAGGGAAA+TGG | 0.477370 | 4.2:-49115744 | MS.gene067728:CDS |
| CGGACGTGTCCAGAACTTGC+TGG | 0.483560 | 4.2:-49115558 | MS.gene067728:CDS |
| AAAGGACTTATATAATTTCA+CGG | 0.493961 | 4.2:-49117108 | MS.gene067728:CDS |
| GAAATCCTGGGCACACAATA+CGG | 0.497533 | 4.2:-49115578 | MS.gene067728:CDS |
| CACTCTGTAGCAGTGTCAAA+TGG | 0.499398 | 4.2:-49115330 | MS.gene067728:CDS |
| ATGTGAAGCGTGATTCTAAT+GGG | 0.504223 | 4.2:-49117478 | MS.gene067728:CDS |
| AATGGTGTGACCCGTGACTT+TGG | 0.505092 | 4.2:-49115051 | MS.gene067728:CDS |
| GCAAGGGTTAAAATACAAGA+TGG | 0.508614 | 4.2:-49117077 | MS.gene067728:CDS |
| GTATCACTATGTACATCAAA+AGG | 0.509968 | 4.2:+49117857 | None:intergenic |
| GGTCAAAAGGGTGGCCATGA+AGG | 0.510809 | 4.2:-49117146 | MS.gene067728:CDS |
| CCACGGGTTTGAAGTAAGAA+AGG | 0.512169 | 4.2:-49117504 | MS.gene067728:CDS |
| TTAGAACAACATCTTGTCCT+TGG | 0.513299 | 4.2:+49115606 | None:intergenic |
| TGTGATGATAGGGTAGTTGT+CGG | 0.517812 | 4.2:+49114895 | None:intergenic |
| ATTTAGTCTGCAACTTGTCA+AGG | 0.524883 | 4.2:+49116055 | None:intergenic |
| CAAGGGTTAAAATACAAGAT+GGG | 0.527779 | 4.2:-49117076 | MS.gene067728:CDS |
| AACAACGATGTTCGTACTGA+TGG | 0.529175 | 4.2:-49117698 | MS.gene067728:CDS |
| GATGTGAAGCGTGATTCTAA+TGG | 0.532287 | 4.2:-49117479 | MS.gene067728:CDS |
| GTTCTAATTGTAGAAATCCT+GGG | 0.533951 | 4.2:-49115590 | MS.gene067728:CDS |
| AAGTGCCCCTCGACGAAACA+TGG | 0.534361 | 4.2:+49115863 | None:intergenic |
| CACGTCCGTATTGTGTGCCC+AGG | 0.534840 | 4.2:+49115573 | None:intergenic |
| ACAAATACAAGCACTAGAAA+GGG | 0.535750 | 4.2:-49115207 | MS.gene067728:CDS |
| GTAGTTGTCGGAGGGAATTG+TGG | 0.539742 | 4.2:+49114907 | None:intergenic |
| AATAAGGAGGGTGTTAATGA+TGG | 0.543414 | 4.2:-49117428 | MS.gene067728:CDS |
| AAGACAGCCATTGTGCAAGT+TGG | 0.545484 | 4.2:-49115005 | MS.gene067728:CDS |
| AGCTAATTCATGGTTGTGAG+AGG | 0.545517 | 4.2:+49117289 | None:intergenic |
| ATGGTGTTTGCAATGAGAAA+GGG | 0.558073 | 4.2:-49117643 | MS.gene067728:CDS |
| CACTGGTATTACACGTAAGA+GGG | 0.559146 | 4.2:-49115286 | MS.gene067728:CDS |
| GGTGTCGTGTCTGAAGATCA+AGG | 0.560464 | 4.2:-49115531 | MS.gene067728:CDS |
| CGAGATGTTGAGAAAAGCAC+TGG | 0.563759 | 4.2:-49115303 | MS.gene067728:CDS |
| GTCTGAAGATCAAGGGGAGA+AGG | 0.567087 | 4.2:-49115523 | MS.gene067728:CDS |
| TATTGTTTGCAAAATACCAC+GGG | 0.573778 | 4.2:-49117520 | MS.gene067728:CDS |
| CCTTTGACATTCACCATCAG+TGG | 0.574175 | 4.2:+49115654 | None:intergenic |
| GTGGAATTTAACCATGGTAA+TGG | 0.576772 | 4.2:-49117662 | MS.gene067728:CDS |
| AATGGTGTTTGCAATGAGAA+AGG | 0.577989 | 4.2:-49117644 | MS.gene067728:CDS |
| TGTGACAGATGATGATATAA+GGG | 0.581249 | 4.2:-49117585 | MS.gene067728:CDS |
| AAATGACCATGTTTCGTCGA+GGG | 0.581274 | 4.2:-49115869 | MS.gene067728:CDS |
| GTGTCGTGTCTGAAGATCAA+GGG | 0.581492 | 4.2:-49115530 | MS.gene067728:CDS |
| GCTAATTCATGGTTGTGAGA+GGG | 0.581523 | 4.2:+49117290 | None:intergenic |
| TCAATTAGTATGCAATAAGG+AGG | 0.584633 | 4.2:-49117441 | MS.gene067728:CDS |
| AATGACCATGTTTCGTCGAG+GGG | 0.585541 | 4.2:-49115868 | MS.gene067728:CDS |
| GCAAGTTGGAACCATAATGT+TGG | 0.585606 | 4.2:-49114991 | MS.gene067728:CDS |
| TAAGATAAATAGCCGTCATG+AGG | 0.585792 | 4.2:-49115751 | MS.gene067728:CDS |
| AGGGTGGCCATGAAGGACTT+GGG | 0.586883 | 4.2:-49117139 | MS.gene067728:CDS |
| GAAGCTTCAAAGATATTCAC+CGG | 0.587720 | 4.2:-49116219 | MS.gene067728:CDS |
| AAGATAAATAGCCGTCATGA+GGG | 0.587755 | 4.2:-49115750 | MS.gene067728:CDS |
| ATACTCACCGGTGTATAACT+CGG | 0.588936 | 4.2:+49114817 | None:intergenic |
| ATGATAGGGTAGTTGTCGGA+GGG | 0.591320 | 4.2:+49114899 | None:intergenic |
| ATTTCACGGATCATCAGGCA+AGG | 0.592596 | 4.2:-49117094 | MS.gene067728:CDS |
| TGGAACCATAATGTTGGGTA+TGG | 0.594448 | 4.2:-49114985 | MS.gene067728:CDS |
| TATGAGTGCGTTGAAGAATG+TGG | 0.597255 | 4.2:-49114714 | MS.gene067728:CDS |
| GAACGAGATGAAGATGAGGA+TGG | 0.598765 | 4.2:-49116138 | MS.gene067728:CDS |
| GTATTGTTTGCAAAATACCA+CGG | 0.599210 | 4.2:-49117521 | MS.gene067728:CDS |
| CAAGTTGGAACCATAATGTT+GGG | 0.599464 | 4.2:-49114990 | MS.gene067728:CDS |
| GTCAATGCAGTTGTCAGCAT+AGG | 0.607551 | 4.2:+49116255 | None:intergenic |
| CATTGCAAACACCATTACCA+TGG | 0.607917 | 4.2:+49117651 | None:intergenic |
| AAGGGTTAAAATACAAGATG+GGG | 0.610552 | 4.2:-49117075 | MS.gene067728:CDS |
| AAACATCGCAGTGACTATTG+TGG | 0.611836 | 4.2:-49114680 | MS.gene067728:CDS |
| ATTATAAGGAGGCTCTAGAA+GGG | 0.613050 | 4.2:-49115791 | MS.gene067728:CDS |
| GACACTGATAGTGATACAGA+TGG | 0.614810 | 4.2:-49117800 | MS.gene067728:CDS |
| GCTACTTTGAGTTACTTCCA+AGG | 0.617165 | 4.2:-49117044 | MS.gene067728:intron |
| GTTGATAAACAAGTTGCTAG+TGG | 0.617676 | 4.2:-49117218 | MS.gene067728:CDS |
| TGATAGTGATACAGATGGGG+TGG | 0.618742 | 4.2:-49117795 | MS.gene067728:CDS |
| CATGTCCATTTCCCTCATGA+CGG | 0.619225 | 4.2:+49115739 | None:intergenic |
| GATGATAGGGTAGTTGTCGG+AGG | 0.619255 | 4.2:+49114898 | None:intergenic |
| CATTGAACGAGATGAAGATG+AGG | 0.623154 | 4.2:-49116142 | MS.gene067728:CDS |
| ACATAGTGATACAGATGAGG+TGG | 0.623452 | 4.2:-49117846 | MS.gene067728:CDS |
| CCACTGATGGTGAATGTCAA+AGG | 0.624002 | 4.2:-49115654 | MS.gene067728:CDS |
| TATGGTTCCAACTTGCACAA+TGG | 0.627946 | 4.2:+49114998 | None:intergenic |
| TTTCACGGATCATCAGGCAA+GGG | 0.637022 | 4.2:-49117093 | MS.gene067728:CDS |
| CCTTTCTTACTTCAAACCCG+TGG | 0.639832 | 4.2:+49117504 | None:intergenic |
| TATGGGGTGCCAAATAATGG+TGG | 0.646881 | 4.2:-49114940 | MS.gene067728:CDS |
| GCTAGTGGTCTACATTCGCA+AGG | 0.649023 | 4.2:-49117203 | MS.gene067728:CDS |
| ATCAAATGGACAAAACGCAA+AGG | 0.651947 | 4.2:+49117266 | None:intergenic |
| AAAATGACCATGTTTCGTCG+AGG | 0.652304 | 4.2:-49115870 | MS.gene067728:CDS |
| TCTGTAGCAGTGTCAAATGG+TGG | 0.657609 | 4.2:-49115327 | MS.gene067728:CDS |
| TGATGGAGATGCAGACGGTG+TGG | 0.660310 | 4.2:-49117681 | MS.gene067728:CDS |
| ACACTGATAGTGATACAGAT+GGG | 0.663559 | 4.2:-49117799 | MS.gene067728:CDS |
| TGTCGTGTCTGAAGATCAAG+GGG | 0.668190 | 4.2:-49115529 | MS.gene067728:CDS |
| TGAATGTCAAAGGTGCCCGT+AGG | 0.674674 | 4.2:-49115644 | MS.gene067728:CDS |
| CAATTAGTATGCAATAAGGA+GGG | 0.675920 | 4.2:-49117440 | MS.gene067728:CDS |
| CAATGTTCCGAGTTATACAC+CGG | 0.682160 | 4.2:-49114824 | MS.gene067728:intron |
| CATTTGACACTGCTACAGAG+TGG | 0.682675 | 4.2:+49115331 | None:intergenic |
| GAGCGCAAGTGATTATAAGG+AGG | 0.683366 | 4.2:-49115802 | MS.gene067728:CDS |
| TGTTGCGAATGATCCACTGA+TGG | 0.687875 | 4.2:-49115667 | MS.gene067728:CDS |
| GACGGTGTGGAATTTAACCA+TGG | 0.688761 | 4.2:-49117668 | MS.gene067728:CDS |
| TGAGGGAAATGGACATGACG+AGG | 0.691164 | 4.2:-49115733 | MS.gene067728:CDS |
| CGTACTGATGGAGATGCAGA+CGG | 0.711480 | 4.2:-49117686 | MS.gene067728:CDS |
| ACATAGACTATTGAACGCAG+CGG | 0.718507 | 4.2:+49115839 | None:intergenic |
| CACTGATAGTGATACAGATG+GGG | 0.724418 | 4.2:-49117798 | MS.gene067728:CDS |
| TGTACATAGTGATACAGATG+AGG | 0.739686 | 4.2:-49117849 | MS.gene067728:CDS |
| AATTATGCAAGAAATCCACA+AGG | 0.743577 | 4.2:+49116346 | None:intergenic |
| GGATATGGAATTCAACACAG+AGG | 0.763384 | 4.2:-49117564 | MS.gene067728:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTATTTTAATATGCACTA+TGG | - | chr4.2:49117593-49117612 | MS.gene067728:CDS | 15.0% |
| !!! | ATTATTTTAATATGCACTAT+GGG | - | chr4.2:49117594-49117613 | MS.gene067728:CDS | 15.0% |
| !!! | TCATAAACTGTTTTAAATAT+AGG | + | chr4.2:49117822-49117841 | None:intergenic | 15.0% |
| !!! | TGAAATTGTATATGATATTT+TGG | - | chr4.2:49117149-49117168 | MS.gene067728:CDS | 15.0% |
| !! | AAAGGACTTATATAATTTCA+CGG | - | chr4.2:49115443-49115462 | MS.gene067728:intron | 20.0% |
| !! | AAAGTTTAAAGATGTCAAAA+AGG | - | chr4.2:49116358-49116377 | MS.gene067728:CDS | 20.0% |
| !!! | ATTTTCAAGGTTAATGTATT+TGG | - | chr4.2:49116446-49116465 | MS.gene067728:intron | 20.0% |
| !!! | TTATTTTAATATGCACTATG+GGG | - | chr4.2:49117595-49117614 | MS.gene067728:CDS | 20.0% |
| ! | AATTAAAGCACAAGCAAAAA+TGG | + | chr4.2:49115739-49115758 | None:intergenic | 25.0% |
| ! | ATATCCACTAAAAATGACAA+GGG | + | chr4.2:49115697-49115716 | None:intergenic | 25.0% |
| ! | CAGCAAATATACTATAACAA+AGG | + | chr4.2:49117419-49117438 | None:intergenic | 25.0% |
| ! | GATGGAAAAAATAAGAAGAA+TGG | - | chr4.2:49115141-49115160 | MS.gene067728:intron | 25.0% |
| ! | GGTGGGTAAAAAAAATTTAT+CGG | - | chr4.2:49116063-49116082 | MS.gene067728:CDS | 25.0% |
| ! | TAAACAATCAAAATACTCAC+CGG | + | chr4.2:49117749-49117768 | None:intergenic | 25.0% |
| ! | TATATCCACTAAAAATGACA+AGG | + | chr4.2:49115698-49115717 | None:intergenic | 25.0% |
| ! | TATCAACTTCACTCAATTTA+CGG | + | chr4.2:49115320-49115339 | None:intergenic | 25.0% |
| !! | CAAAAAAGATGTAGCTTTTT+CGG | - | chr4.2:49116469-49116488 | MS.gene067728:intron | 25.0% |
| !! | GACATCTTTAAACTTTTTAC+CGG | + | chr4.2:49116354-49116373 | None:intergenic | 25.0% |
| !! | TCAATGTTGATTGTGATATT+TGG | + | chr4.2:49117386-49117405 | None:intergenic | 25.0% |
| !! | TTTTTCATCATTACCTTCTT+GGG | + | chr4.2:49116664-49116683 | None:intergenic | 25.0% |
| !!! | GGTTCTAAATTTGTTTTCAA+AGG | - | chr4.2:49115788-49115807 | MS.gene067728:CDS | 25.0% |
| !!! | TTGTTTTGATTGTTGTAGAA+TGG | - | chr4.2:49117482-49117501 | MS.gene067728:CDS | 25.0% |
| !!! | TTTTTTCATCATTACCTTCT+TGG | + | chr4.2:49116665-49116684 | None:intergenic | 25.0% |
| AAAACTGATCCACCATTATT+TGG | + | chr4.2:49117623-49117642 | None:intergenic | 30.0% | |
| AAACAATAGAGACATACAAG+TGG | - | chr4.2:49115766-49115785 | MS.gene067728:CDS | 30.0% | |
| AACAAATACAAGCACTAGAA+AGG | - | chr4.2:49117343-49117362 | MS.gene067728:CDS | 30.0% | |
| AACAATAGAGACATACAAGT+GGG | - | chr4.2:49115767-49115786 | MS.gene067728:CDS | 30.0% | |
| AAGGGTTAAAATACAAGATG+GGG | - | chr4.2:49115476-49115495 | MS.gene067728:intron | 30.0% | |
| AATTATGCAAGAAATCCACA+AGG | + | chr4.2:49116208-49116227 | None:intergenic | 30.0% | |
| ACAAATACAAGCACTAGAAA+GGG | - | chr4.2:49117344-49117363 | MS.gene067728:CDS | 30.0% | |
| ACCTATAGAAAGAACAAGTA+TGG | - | chr4.2:49115666-49115685 | MS.gene067728:CDS | 30.0% | |
| AGATGATGATATAAGGGATA+TGG | - | chr4.2:49114972-49114991 | MS.gene067728:CDS | 30.0% | |
| AGTGTTAGAATGTGATGATA+GGG | + | chr4.2:49117669-49117688 | None:intergenic | 30.0% | |
| ATACTTGTTCTTTCTATAGG+TGG | + | chr4.2:49115667-49115686 | None:intergenic | 30.0% | |
| ATATAATTTCACGGATCATC+AGG | - | chr4.2:49115452-49115471 | MS.gene067728:intron | 30.0% | |
| ATCATTCGCAACAAATTTGT+TGG | + | chr4.2:49116877-49116896 | None:intergenic | 30.0% | |
| ATGTGACAGATGATGATATA+AGG | - | chr4.2:49114965-49114984 | MS.gene067728:CDS | 30.0% | |
| CAAGGGTTAAAATACAAGAT+GGG | - | chr4.2:49115475-49115494 | MS.gene067728:intron | 30.0% | |
| CAATTAGTATGCAATAAGGA+GGG | - | chr4.2:49115111-49115130 | MS.gene067728:intron | 30.0% | |
| GAGTTTACATTTACAGATGA+TGG | - | chr4.2:49115561-49115580 | MS.gene067728:CDS | 30.0% | |
| GATTCATTATCAGACTCAAT+AGG | + | chr4.2:49117059-49117078 | None:intergenic | 30.0% | |
| GTAAGAACATGTCATATCTT+GGG | - | chr4.2:49115372-49115391 | MS.gene067728:intron | 30.0% | |
| GTATCACTATGTACATCAAA+AGG | + | chr4.2:49114697-49114716 | None:intergenic | 30.0% | |
| GTATTGTTTGCAAAATACCA+CGG | - | chr4.2:49115030-49115049 | MS.gene067728:CDS | 30.0% | |
| GTTCTAATTGTAGAAATCCT+GGG | - | chr4.2:49116961-49116980 | MS.gene067728:intron | 30.0% | |
| TATCCACTAAAAATGACAAG+GGG | + | chr4.2:49115696-49115715 | None:intergenic | 30.0% | |
| TATTGTTTGCAAAATACCAC+GGG | - | chr4.2:49115031-49115050 | MS.gene067728:CDS | 30.0% | |
| TCAATTAGTATGCAATAAGG+AGG | - | chr4.2:49115110-49115129 | MS.gene067728:intron | 30.0% | |
| TCACTCAATTTACGGTAATT+AGG | + | chr4.2:49115312-49115331 | None:intergenic | 30.0% | |
| TCCATACTTGTTCTTTCTAT+AGG | + | chr4.2:49115670-49115689 | None:intergenic | 30.0% | |
| TGTAAGAACATGTCATATCT+TGG | - | chr4.2:49115371-49115390 | MS.gene067728:intron | 30.0% | |
| TGTGACAGATGATGATATAA+GGG | - | chr4.2:49114966-49114985 | MS.gene067728:CDS | 30.0% | |
| TGTTCTAATTGTAGAAATCC+TGG | - | chr4.2:49116960-49116979 | MS.gene067728:intron | 30.0% | |
| TTCTAACACCACACAAAAAA+TGG | + | chr4.2:49116124-49116143 | None:intergenic | 30.0% | |
| ! | ATTTTTCATGTCCAAAGTCA+CGG | + | chr4.2:49117514-49117533 | None:intergenic | 30.0% |
| ! | TTTTGGATGTTTGTCATACA+TGG | + | chr4.2:49115814-49115833 | None:intergenic | 30.0% |
| !! | ATTTTGACCTATCAAACAAC+AGG | - | chr4.2:49116042-49116061 | MS.gene067728:CDS | 30.0% |
| !! | TAAATTTGTTGCGAGTGATA+AGG | - | chr4.2:49116851-49116870 | MS.gene067728:intron | 30.0% |
| !!! | ACGCCTAGAAAACATTTTTT+GGG | - | chr4.2:49115584-49115603 | MS.gene067728:CDS | 30.0% |
| !!! | CATATCTTGGGTTTTTTGAT+GGG | - | chr4.2:49115384-49115403 | MS.gene067728:intron | 30.0% |
| !!! | TCATATCTTGGGTTTTTTGA+TGG | - | chr4.2:49115383-49115402 | MS.gene067728:intron | 30.0% |
| !!! | TGGAAACATTGTCATTTTCA+AGG | - | chr4.2:49116433-49116452 | MS.gene067728:intron | 30.0% |
| AAAGGGAAAGAGAACTTTGA+TGG | - | chr4.2:49114925-49114944 | MS.gene067728:CDS | 35.0% | |
| AAGATAAATAGCCGTCATGA+GGG | - | chr4.2:49116801-49116820 | MS.gene067728:intron | 35.0% | |
| AATGGTGTTTGCAATGAGAA+AGG | - | chr4.2:49114907-49114926 | MS.gene067728:CDS | 35.0% | |
| ACTTCATGGCACAAATAATG+TGG | + | chr4.2:49116568-49116587 | None:intergenic | 35.0% | |
| AGGACTTGGGTTTATCAAAA+AGG | - | chr4.2:49115425-49115444 | MS.gene067728:intron | 35.0% | |
| ATCAAATGGACAAAACGCAA+AGG | + | chr4.2:49115288-49115307 | None:intergenic | 35.0% | |
| ATCACTCGCAACAAATTTAC+TGG | + | chr4.2:49116850-49116869 | None:intergenic | 35.0% | |
| ATGGTGTTTGCAATGAGAAA+GGG | - | chr4.2:49114908-49114927 | MS.gene067728:CDS | 35.0% | |
| ATGTGAAGCGTGATTCTAAT+GGG | - | chr4.2:49115073-49115092 | MS.gene067728:intron | 35.0% | |
| ATTTAGTCTGCAACTTGTCA+AGG | + | chr4.2:49116499-49116518 | None:intergenic | 35.0% | |
| CAGTGTTAGAATGTGATGAT+AGG | + | chr4.2:49117670-49117689 | None:intergenic | 35.0% | |
| CTGAAAAGTTTGAATCTGAG+TGG | - | chr4.2:49116003-49116022 | MS.gene067728:intron | 35.0% | |
| CTTCATGGCACAAATAATGT+GGG | + | chr4.2:49116567-49116586 | None:intergenic | 35.0% | |
| CTTCATGTTGTCATACTTCA+TGG | + | chr4.2:49116582-49116601 | None:intergenic | 35.0% | |
| GAAGCTTCAAAGATATTCAC+CGG | - | chr4.2:49116332-49116351 | MS.gene067728:CDS | 35.0% | |
| GAGTTGTGTTTCCAAATACA+AGG | - | chr4.2:49115877-49115896 | MS.gene067728:CDS | 35.0% | |
| GCAAGGGTTAAAATACAAGA+TGG | - | chr4.2:49115474-49115493 | MS.gene067728:intron | 35.0% | |
| GCGTCAATTAGTATGCAATA+AGG | - | chr4.2:49115107-49115126 | MS.gene067728:intron | 35.0% | |
| GTATGACAAACATCCAAAAG+CGG | - | chr4.2:49115815-49115834 | MS.gene067728:CDS | 35.0% | |
| GTGGAATTTAACCATGGTAA+TGG | - | chr4.2:49114889-49114908 | MS.gene067728:CDS | 35.0% | |
| TAACACCATACCCAACATTA+TGG | + | chr4.2:49117574-49117593 | None:intergenic | 35.0% | |
| TAAGATAAATAGCCGTCATG+AGG | - | chr4.2:49116800-49116819 | MS.gene067728:intron | 35.0% | |
| TACGGTAATTAGGCATCAAA+TGG | + | chr4.2:49115302-49115321 | None:intergenic | 35.0% | |
| TATCATTACTCATAGACAGC+TGG | + | chr4.2:49117187-49117206 | None:intergenic | 35.0% | |
| TGTACATAGTGATACAGATG+AGG | - | chr4.2:49114702-49114721 | MS.gene067728:CDS | 35.0% | |
| TTAGAACAACATCTTGTCCT+TGG | + | chr4.2:49116948-49116967 | None:intergenic | 35.0% | |
| ! | ACACTGATAGTGATACAGAT+GGG | - | chr4.2:49114752-49114771 | MS.gene067728:intron | 35.0% |
| ! | AGGTTTGACTATGAGTGTTT+TGG | - | chr4.2:49115621-49115640 | MS.gene067728:CDS | 35.0% |
| ! | CAAGTTGGAACCATAATGTT+GGG | - | chr4.2:49117561-49117580 | MS.gene067728:CDS | 35.0% |
| ! | CACTCAGATTCAAACTTTTC+AGG | + | chr4.2:49116005-49116024 | None:intergenic | 35.0% |
| ! | CTGCCCAAAAAATGTTTTCT+AGG | + | chr4.2:49115590-49115609 | None:intergenic | 35.0% |
| ! | GTTGATAAACAAGTTGCTAG+TGG | - | chr4.2:49115333-49115352 | MS.gene067728:CDS | 35.0% |
| ! | TAAGAGCGCAAGTGATTATA+AGG | - | chr4.2:49116746-49116765 | MS.gene067728:intron | 35.0% |
| ! | TTATCGGTTGAAGAGAATGT+GGG | - | chr4.2:49116079-49116098 | MS.gene067728:CDS | 35.0% |
| ! | TTTAGTGGATATAACCACCA+TGG | - | chr4.2:49115705-49115724 | MS.gene067728:CDS | 35.0% |
| ! | TTTATCGGTTGAAGAGAATG+TGG | - | chr4.2:49116078-49116097 | MS.gene067728:CDS | 35.0% |
| ! | TTTGAGTTACTTCCAAGGTA+AGG | - | chr4.2:49115512-49115531 | MS.gene067728:CDS | 35.0% |
| ! | TTTTTCATGTCCAAAGTCAC+GGG | + | chr4.2:49117513-49117532 | None:intergenic | 35.0% |
| !! | AATAAGGAGGGTGTTAATGA+TGG | - | chr4.2:49115123-49115142 | MS.gene067728:intron | 35.0% |
| !! | ATTATAAGGAGGCTCTAGAA+GGG | - | chr4.2:49116760-49116779 | MS.gene067728:intron | 35.0% |
| !! | CAAAAATGGTTGTTTCTCCA+TGG | + | chr4.2:49115725-49115744 | None:intergenic | 35.0% |
| !! | TGCTGAAAATTGTGTTGCTT+TGG | - | chr4.2:49117434-49117453 | MS.gene067728:CDS | 35.0% |
| !!! | AAACCCCTTGTCATTTTTAG+TGG | - | chr4.2:49115690-49115709 | MS.gene067728:CDS | 35.0% |
| !!! | GACGCCTAGAAAACATTTTT+TGG | - | chr4.2:49115583-49115602 | MS.gene067728:CDS | 35.0% |
| !!! | GGTTTTTTGATGGGTCAAAA+GGG | - | chr4.2:49115393-49115412 | MS.gene067728:intron | 35.0% |
| !!! | GTGTTGACTTTTTACTCCTA+CGG | + | chr4.2:49116926-49116945 | None:intergenic | 35.0% |
| !!! | TCAAACTTTTCAGGTGTACA+AGG | + | chr4.2:49115996-49116015 | None:intergenic | 35.0% |
| !!! | TGTTGACTTTTTACTCCTAC+GGG | + | chr4.2:49116925-49116944 | None:intergenic | 35.0% |
| AAAAGCGGTGATTACTGATG+GGG | - | chr4.2:49115830-49115849 | MS.gene067728:CDS | 40.0% | |
| AAAATGACCATGTTTCGTCG+AGG | - | chr4.2:49116681-49116700 | MS.gene067728:intron | 40.0% | |
| AAACATCGCAGTGACTATTG+TGG | - | chr4.2:49117871-49117890 | MS.gene067728:CDS | 40.0% | |
| AAATGACCATGTTTCGTCGA+GGG | - | chr4.2:49116682-49116701 | MS.gene067728:intron | 40.0% | |
| AAATGGACATGACGAGGATA+AGG | - | chr4.2:49116824-49116843 | MS.gene067728:intron | 40.0% | |
| AACAACGATGTTCGTACTGA+TGG | - | chr4.2:49114853-49114872 | MS.gene067728:CDS | 40.0% | |
| AACGCAAAGGAGCTAATTCA+TGG | + | chr4.2:49115275-49115294 | None:intergenic | 40.0% | |
| ACATAGACTATTGAACGCAG+CGG | + | chr4.2:49116715-49116734 | None:intergenic | 40.0% | |
| ACATAGTGATACAGATGAGG+TGG | - | chr4.2:49114705-49114724 | MS.gene067728:CDS | 40.0% | |
| ACGACTTTGTTCGTACGATT+TGG | - | chr4.2:49115220-49115239 | MS.gene067728:CDS | 40.0% | |
| AGAACGACATCAATCTGTGA+AGG | - | chr4.2:49116140-49116159 | MS.gene067728:CDS | 40.0% | |
| AGATGTCAAAAAGGCGATAG+AGG | - | chr4.2:49116367-49116386 | MS.gene067728:CDS | 40.0% | |
| AGCTAATTCATGGTTGTGAG+AGG | + | chr4.2:49115265-49115284 | None:intergenic | 40.0% | |
| AGTTTGAATCTGAGTGGAAG+AGG | - | chr4.2:49116009-49116028 | MS.gene067728:intron | 40.0% | |
| ATACTCACCGGTGTATAACT+CGG | + | chr4.2:49117737-49117756 | None:intergenic | 40.0% | |
| CAAAAGCGGTGATTACTGAT+GGG | - | chr4.2:49115829-49115848 | MS.gene067728:CDS | 40.0% | |
| CAATGTTCCGAGTTATACAC+CGG | - | chr4.2:49117727-49117746 | MS.gene067728:CDS | 40.0% | |
| CACTGGTATTACACGTAAGA+GGG | - | chr4.2:49117265-49117284 | MS.gene067728:CDS | 40.0% | |
| CATTGAACGAGATGAAGATG+AGG | - | chr4.2:49116409-49116428 | MS.gene067728:intron | 40.0% | |
| CATTGCAAACACCATTACCA+TGG | + | chr4.2:49114903-49114922 | None:intergenic | 40.0% | |
| CGCAGAACAATTAGTTCGAA+TGG | + | chr4.2:49115184-49115203 | None:intergenic | 40.0% | |
| GATGTGAAGCGTGATTCTAA+TGG | - | chr4.2:49115072-49115091 | MS.gene067728:intron | 40.0% | |
| GCACAAATAATGTGGGAACA+TGG | + | chr4.2:49116560-49116579 | None:intergenic | 40.0% | |
| GCTAATTCATGGTTGTGAGA+GGG | + | chr4.2:49115264-49115283 | None:intergenic | 40.0% | |
| GGAGTAAAAAGTCAACACCA+AGG | - | chr4.2:49116928-49116947 | MS.gene067728:intron | 40.0% | |
| GGATATGGAATTCAACACAG+AGG | - | chr4.2:49114987-49115006 | MS.gene067728:CDS | 40.0% | |
| GTTTGAATCTGAGTGGAAGA+GGG | - | chr4.2:49116010-49116029 | MS.gene067728:intron | 40.0% | |
| TATCAGTATCAGCCTTACCT+TGG | + | chr4.2:49115527-49115546 | None:intergenic | 40.0% | |
| TATGAGTGCGTTGAAGAATG+TGG | - | chr4.2:49117837-49117856 | MS.gene067728:CDS | 40.0% | |
| TATGGTTCCAACTTGCACAA+TGG | + | chr4.2:49117556-49117575 | None:intergenic | 40.0% | |
| TGACCTATCAAACAACAGGT+GGG | - | chr4.2:49116046-49116065 | MS.gene067728:CDS | 40.0% | |
| TGATAAACCCAAGTCCTTCA+TGG | + | chr4.2:49115422-49115441 | None:intergenic | 40.0% | |
| TGGAACCATAATGTTGGGTA+TGG | - | chr4.2:49117566-49117585 | MS.gene067728:CDS | 40.0% | |
| TGTGATGATAGGGTAGTTGT+CGG | + | chr4.2:49117659-49117678 | None:intergenic | 40.0% | |
| TTCATCATTACCTTCTTGGG+AGG | + | chr4.2:49116661-49116680 | None:intergenic | 40.0% | |
| TTCGAATGGTTAGCGTAGAT+CGG | + | chr4.2:49115170-49115189 | None:intergenic | 40.0% | |
| TTGACCTATCAAACAACAGG+TGG | - | chr4.2:49116045-49116064 | MS.gene067728:CDS | 40.0% | |
| TTTGGGCAGATTCTACTAGT+AGG | - | chr4.2:49115601-49115620 | MS.gene067728:CDS | 40.0% | |
| ! | CACTGATAGTGATACAGATG+GGG | - | chr4.2:49114753-49114772 | MS.gene067728:intron | 40.0% |
| ! | GACACTGATAGTGATACAGA+TGG | - | chr4.2:49114751-49114770 | MS.gene067728:intron | 40.0% |
| ! | GCAAGTTGGAACCATAATGT+TGG | - | chr4.2:49117560-49117579 | MS.gene067728:CDS | 40.0% |
| ! | GCTACTTTGAGTTACTTCCA+AGG | - | chr4.2:49115507-49115526 | MS.gene067728:CDS | 40.0% |
| ! | TTACCCACCTGTTGTTTGAT+AGG | + | chr4.2:49116052-49116071 | None:intergenic | 40.0% |
| !! | AAATGGTTGTTTCTCCATGG+TGG | + | chr4.2:49115722-49115741 | None:intergenic | 40.0% |
| !! | GATTATAAGGAGGCTCTAGA+AGG | - | chr4.2:49116759-49116778 | MS.gene067728:intron | 40.0% |
| !! | TTTTTGATGGGTCAAAAGGG+TGG | - | chr4.2:49115396-49115415 | MS.gene067728:intron | 40.0% |
| !!! | ATGCGAGACCATTTTTTGTG+TGG | - | chr4.2:49116113-49116132 | MS.gene067728:CDS | 40.0% |
| !!! | GGGTTTTTTGATGGGTCAAA+AGG | - | chr4.2:49115392-49115411 | MS.gene067728:intron | 40.0% |
| AAGACAGCCATTGTGCAAGT+TGG | - | chr4.2:49117546-49117565 | MS.gene067728:CDS | 45.0% | |
| AATAGCCGTCATGAGGGAAA+TGG | - | chr4.2:49116807-49116826 | MS.gene067728:intron | 45.0% | |
| AATGACCATGTTTCGTCGAG+GGG | - | chr4.2:49116683-49116702 | MS.gene067728:intron | 45.0% | |
| ACACCAATTCCAGCAAGTTC+TGG | + | chr4.2:49117005-49117024 | None:intergenic | 45.0% | |
| ACTGGAACACACAATGTTCC+TGG | - | chr4.2:49117698-49117717 | MS.gene067728:CDS | 45.0% | |
| AGCATTTCGATGCAAATGCC+AGG | + | chr4.2:49115916-49115935 | None:intergenic | 45.0% | |
| ATGATAGGGTAGTTGTCGGA+GGG | + | chr4.2:49117655-49117674 | None:intergenic | 45.0% | |
| ATTTCACGGATCATCAGGCA+AGG | - | chr4.2:49115457-49115476 | MS.gene067728:intron | 45.0% | |
| CAAAGGCGATGCCTTGTATT+TGG | + | chr4.2:49115891-49115910 | None:intergenic | 45.0% | |
| CACTCTGTAGCAGTGTCAAA+TGG | - | chr4.2:49117221-49117240 | MS.gene067728:CDS | 45.0% | |
| CATGTCCATTTCCCTCATGA+CGG | + | chr4.2:49116815-49116834 | None:intergenic | 45.0% | |
| CATTTGACACTGCTACAGAG+TGG | + | chr4.2:49117223-49117242 | None:intergenic | 45.0% | |
| CCAAAAGCGGTGATTACTGA+TGG | - | chr4.2:49115828-49115847 | MS.gene067728:CDS | 45.0% | |
| CCTTTCTTACTTCAAACCCG+TGG | + | chr4.2:49115050-49115069 | None:intergenic | 45.0% | |
| CCTTTGACATTCACCATCAG+TGG | + | chr4.2:49116900-49116919 | None:intergenic | 45.0% | |
| GAAATCCTGGGCACACAATA+CGG | - | chr4.2:49116973-49116992 | MS.gene067728:intron | 45.0% | |
| GAACGAGATGAAGATGAGGA+TGG | - | chr4.2:49116413-49116432 | MS.gene067728:intron | 45.0% | |
| GACGGTGTGGAATTTAACCA+TGG | - | chr4.2:49114883-49114902 | MS.gene067728:CDS | 45.0% | |
| GAGCGCAAGTGATTATAAGG+AGG | - | chr4.2:49116749-49116768 | MS.gene067728:intron | 45.0% | |
| GTCAATGCAGTTGTCAGCAT+AGG | + | chr4.2:49116299-49116318 | None:intergenic | 45.0% | |
| GTGTCGTGTCTGAAGATCAA+GGG | - | chr4.2:49117021-49117040 | MS.gene067728:intron | 45.0% | |
| TCTAACACTGCTCTGCATAC+TGG | - | chr4.2:49117680-49117699 | MS.gene067728:CDS | 45.0% | |
| TCTGTAGCAGTGTCAAATGG+TGG | - | chr4.2:49117224-49117243 | MS.gene067728:CDS | 45.0% | |
| TGTCGTGTCTGAAGATCAAG+GGG | - | chr4.2:49117022-49117041 | MS.gene067728:intron | 45.0% | |
| TGTTGCGAATGATCCACTGA+TGG | - | chr4.2:49116884-49116903 | MS.gene067728:intron | 45.0% | |
| TTTCACGGATCATCAGGCAA+GGG | - | chr4.2:49115458-49115477 | MS.gene067728:intron | 45.0% | |
| ! | CACTATGGGGTGCCAAATAA+TGG | - | chr4.2:49117608-49117627 | MS.gene067728:CDS | 45.0% |
| ! | CCACGGGTTTGAAGTAAGAA+AGG | - | chr4.2:49115047-49115066 | MS.gene067728:CDS | 45.0% |
| ! | CCACTGATGGTGAATGTCAA+AGG | - | chr4.2:49116897-49116916 | MS.gene067728:intron | 45.0% |
| ! | CCATCAGTAATCACCGCTTT+TGG | + | chr4.2:49115831-49115850 | None:intergenic | 45.0% |
| ! | CGAGATGTTGAGAAAAGCAC+TGG | - | chr4.2:49117248-49117267 | MS.gene067728:CDS | 45.0% |
| ! | GAAGTCTGACTTGCAAGAGA+TGG | - | chr4.2:49116598-49116617 | MS.gene067728:intron | 45.0% |
| ! | GCACTGGTATTACACGTAAG+AGG | - | chr4.2:49117264-49117283 | MS.gene067728:CDS | 45.0% |
| ! | TATGGGGTGCCAAATAATGG+TGG | - | chr4.2:49117611-49117630 | MS.gene067728:CDS | 45.0% |
| ! | TGATAGTGATACAGATGGGG+TGG | - | chr4.2:49114756-49114775 | MS.gene067728:intron | 45.0% |
| ! | TGTAGACGCTTTGAACGTAG+AGG | - | chr4.2:49116530-49116549 | MS.gene067728:intron | 45.0% |
| !! | TGTCCAGAACTTGCTGGAAT+TGG | - | chr4.2:49116999-49117018 | MS.gene067728:intron | 45.0% |
| !!! | CCACAAGGCTGTTTTTGTGT+CGG | + | chr4.2:49116193-49116212 | None:intergenic | 45.0% |
| AATGGTGTGACCCGTGACTT+TGG | - | chr4.2:49117500-49117519 | MS.gene067728:CDS | 50.0% | |
| CCGACACAAAAACAGCCTTG+TGG | - | chr4.2:49116190-49116209 | MS.gene067728:CDS | 50.0% | |
| CTCGGAACATTGTGTGTTCC+AGG | + | chr4.2:49117719-49117738 | None:intergenic | 50.0% | |
| GATGATAGGGTAGTTGTCGG+AGG | + | chr4.2:49117656-49117675 | None:intergenic | 50.0% | |
| GCTAGTGGTCTACATTCGCA+AGG | - | chr4.2:49115348-49115367 | MS.gene067728:CDS | 50.0% | |
| GTAGTTGTCGGAGGGAATTG+TGG | + | chr4.2:49117647-49117666 | None:intergenic | 50.0% | |
| GTCTGAAGATCAAGGGGAGA+AGG | - | chr4.2:49117028-49117047 | MS.gene067728:intron | 50.0% | |
| TCGTCATTTGCCTCCCAAGA+AGG | - | chr4.2:49116648-49116667 | MS.gene067728:intron | 50.0% | |
| TGAGGGAAATGGACATGACG+AGG | - | chr4.2:49116818-49116837 | MS.gene067728:intron | 50.0% | |
| ! | CGTACTGATGGAGATGCAGA+CGG | - | chr4.2:49114865-49114884 | MS.gene067728:CDS | 50.0% |
| ! | GGTGTCGTGTCTGAAGATCA+AGG | - | chr4.2:49117020-49117039 | MS.gene067728:intron | 50.0% |
| !! | TGAATGTCAAAGGTGCCCGT+AGG | - | chr4.2:49116907-49116926 | MS.gene067728:intron | 50.0% |
| AAGGGTGGCCATGAAGGACT+TGG | - | chr4.2:49115411-49115430 | MS.gene067728:intron | 55.0% | |
| AAGTGCCCCTCGACGAAACA+TGG | + | chr4.2:49116691-49116710 | None:intergenic | 55.0% | |
| AGGGTGGCCATGAAGGACTT+GGG | - | chr4.2:49115412-49115431 | MS.gene067728:intron | 55.0% | |
| GATGCAAATGCCAGGCGCAA+AGG | + | chr4.2:49115908-49115927 | None:intergenic | 55.0% | |
| GGTCAAAAGGGTGGCCATGA+AGG | - | chr4.2:49115405-49115424 | MS.gene067728:intron | 55.0% | |
| TGATGGAGATGCAGACGGTG+TGG | - | chr4.2:49114870-49114889 | MS.gene067728:CDS | 55.0% | |
| CACGTCCGTATTGTGTGCCC+AGG | + | chr4.2:49116981-49117000 | None:intergenic | 60.0% | |
| CGGACGTGTCCAGAACTTGC+TGG | - | chr4.2:49116993-49117012 | MS.gene067728:intron | 60.0% | |
| !! | CAAGGCATCGCCTTTGCGCC+TGG | - | chr4.2:49115895-49115914 | MS.gene067728:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 49114667 | 49117906 | 49114667 | ID=MS.gene067728 |
| chr4.2 | mRNA | 49114667 | 49117906 | 49114667 | ID=MS.gene067728.t1;Parent=MS.gene067728 |
| chr4.2 | exon | 49117045 | 49117906 | 49117045 | ID=MS.gene067728.t1.exon1;Parent=MS.gene067728.t1 |
| chr4.2 | CDS | 49117045 | 49117906 | 49117045 | ID=cds.MS.gene067728.t1;Parent=MS.gene067728.t1 |
| chr4.2 | exon | 49116028 | 49116408 | 49116028 | ID=MS.gene067728.t1.exon2;Parent=MS.gene067728.t1 |
| chr4.2 | CDS | 49116028 | 49116408 | 49116028 | ID=cds.MS.gene067728.t1;Parent=MS.gene067728.t1 |
| chr4.2 | exon | 49115482 | 49115906 | 49115482 | ID=MS.gene067728.t1.exon3;Parent=MS.gene067728.t1 |
| chr4.2 | CDS | 49115482 | 49115906 | 49115482 | ID=cds.MS.gene067728.t1;Parent=MS.gene067728.t1 |
| chr4.2 | exon | 49115164 | 49115385 | 49115164 | ID=MS.gene067728.t1.exon4;Parent=MS.gene067728.t1 |
| chr4.2 | CDS | 49115164 | 49115385 | 49115164 | ID=cds.MS.gene067728.t1;Parent=MS.gene067728.t1 |
| chr4.2 | exon | 49114825 | 49115073 | 49114825 | ID=MS.gene067728.t1.exon5;Parent=MS.gene067728.t1 |
| chr4.2 | CDS | 49114825 | 49115073 | 49114825 | ID=cds.MS.gene067728.t1;Parent=MS.gene067728.t1 |
| chr4.2 | exon | 49114667 | 49114738 | 49114667 | ID=MS.gene067728.t1.exon6;Parent=MS.gene067728.t1 |
| chr4.2 | CDS | 49114667 | 49114738 | 49114667 | ID=cds.MS.gene067728.t1;Parent=MS.gene067728.t1 |
| Gene Sequence |
| Protein sequence |
