Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06773.t1 | XP_013461513.1 | 96.2 | 312 | 11 | 1 | 1 | 312 | 1 | 311 | 1.10E-158 | 569.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06773.t1 | O22873 | 48.8 | 330 | 111 | 10 | 5 | 290 | 32 | 347 | 1.9e-58 | 227.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06773.t1 | A0A072V2G2 | 96.2 | 312 | 11 | 1 | 1 | 312 | 1 | 311 | 7.9e-159 | 569.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene06773.t1 | TF | bZIP |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049400 | MS.gene06773 | 0.960685 | 7.75E-119 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06773.t1 | MTR_3g094020 | 98.397 | 312 | 4 | 1 | 1 | 312 | 1 | 311 | 0.0 | 629 |
| MS.gene06773.t1 | MTR_5g075390 | 52.366 | 317 | 131 | 8 | 7 | 312 | 51 | 358 | 4.53e-94 | 283 |
| MS.gene06773.t1 | MTR_3g467120 | 46.705 | 349 | 134 | 11 | 7 | 312 | 38 | 377 | 2.82e-87 | 266 |
| MS.gene06773.t1 | MTR_2g099050 | 43.056 | 288 | 89 | 10 | 7 | 231 | 72 | 347 | 1.15e-50 | 173 |
| MS.gene06773.t1 | MTR_6g034945 | 48.624 | 218 | 87 | 6 | 7 | 201 | 28 | 243 | 8.20e-48 | 162 |
| MS.gene06773.t1 | MTR_4g072090 | 69.492 | 118 | 36 | 0 | 90 | 207 | 341 | 458 | 2.21e-46 | 164 |
| MS.gene06773.t1 | MTR_4g072090 | 66.981 | 106 | 35 | 0 | 90 | 195 | 341 | 446 | 2.54e-38 | 141 |
| MS.gene06773.t1 | MTR_1g023690 | 51.923 | 156 | 73 | 1 | 92 | 247 | 370 | 523 | 1.55e-29 | 118 |
| MS.gene06773.t1 | MTR_2g090900 | 46.809 | 94 | 50 | 0 | 108 | 201 | 190 | 283 | 6.09e-18 | 83.2 |
| MS.gene06773.t1 | MTR_2g090900 | 46.809 | 94 | 50 | 0 | 108 | 201 | 190 | 283 | 1.09e-17 | 82.8 |
| MS.gene06773.t1 | MTR_4g079500 | 44.681 | 94 | 52 | 0 | 108 | 201 | 193 | 286 | 4.18e-17 | 80.9 |
| MS.gene06773.t1 | MTR_1g099030 | 31.053 | 190 | 119 | 2 | 24 | 213 | 51 | 228 | 5.59e-17 | 79.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06773.t1 | AT2G40620 | 51.057 | 331 | 98 | 11 | 5 | 288 | 32 | 345 | 8.79e-84 | 257 |
| MS.gene06773.t1 | AT1G06850 | 51.082 | 231 | 86 | 4 | 78 | 301 | 116 | 326 | 1.47e-68 | 217 |
| MS.gene06773.t1 | AT2G31370 | 46.275 | 255 | 86 | 7 | 7 | 215 | 58 | 307 | 1.04e-53 | 180 |
| MS.gene06773.t1 | AT2G31370 | 46.275 | 255 | 86 | 7 | 7 | 215 | 58 | 307 | 1.26e-53 | 180 |
| MS.gene06773.t1 | AT2G31370 | 46.275 | 255 | 86 | 7 | 7 | 215 | 58 | 307 | 1.26e-53 | 180 |
| MS.gene06773.t1 | AT2G31370 | 46.275 | 255 | 86 | 7 | 7 | 215 | 58 | 307 | 1.26e-53 | 180 |
| MS.gene06773.t1 | AT2G31370 | 46.275 | 255 | 86 | 7 | 7 | 215 | 58 | 307 | 1.26e-53 | 180 |
| MS.gene06773.t1 | AT2G31370 | 46.275 | 255 | 86 | 7 | 7 | 215 | 58 | 307 | 1.26e-53 | 180 |
| MS.gene06773.t1 | AT2G31370 | 46.275 | 255 | 86 | 7 | 7 | 215 | 58 | 307 | 1.26e-53 | 180 |
| MS.gene06773.t1 | AT1G06070 | 45.200 | 250 | 94 | 6 | 7 | 217 | 73 | 318 | 1.24e-51 | 176 |
| MS.gene06773.t1 | AT4G38900 | 72.174 | 115 | 32 | 0 | 92 | 206 | 377 | 491 | 2.07e-46 | 164 |
| MS.gene06773.t1 | AT4G38900 | 72.174 | 115 | 32 | 0 | 92 | 206 | 377 | 491 | 2.07e-46 | 164 |
| MS.gene06773.t1 | AT1G43700 | 54.070 | 172 | 63 | 4 | 70 | 227 | 142 | 311 | 2.40e-46 | 160 |
| MS.gene06773.t1 | AT4G38900 | 68.595 | 121 | 32 | 1 | 92 | 206 | 377 | 497 | 5.84e-44 | 158 |
| MS.gene06773.t1 | AT2G21230 | 57.447 | 141 | 59 | 1 | 66 | 206 | 328 | 467 | 3.86e-41 | 150 |
| MS.gene06773.t1 | AT2G21230 | 57.447 | 141 | 59 | 1 | 66 | 206 | 328 | 467 | 3.86e-41 | 150 |
| MS.gene06773.t1 | AT2G21230 | 54.422 | 147 | 60 | 2 | 66 | 206 | 328 | 473 | 3.47e-38 | 142 |
| MS.gene06773.t1 | AT2G21230 | 55.645 | 124 | 54 | 1 | 66 | 189 | 328 | 450 | 5.83e-34 | 129 |
| MS.gene06773.t1 | AT1G06850 | 64.835 | 91 | 31 | 1 | 78 | 167 | 116 | 206 | 1.56e-31 | 118 |
| MS.gene06773.t1 | AT2G12900 | 41.667 | 96 | 56 | 0 | 109 | 204 | 116 | 211 | 4.24e-19 | 85.5 |
| MS.gene06773.t1 | AT3G58120 | 46.237 | 93 | 50 | 0 | 109 | 201 | 202 | 294 | 1.40e-18 | 85.1 |
| MS.gene06773.t1 | AT2G42380 | 41.026 | 117 | 62 | 1 | 108 | 217 | 185 | 301 | 1.82e-18 | 84.7 |
| MS.gene06773.t1 | AT2G12940 | 37.500 | 112 | 69 | 1 | 92 | 203 | 132 | 242 | 7.15e-17 | 79.7 |
| MS.gene06773.t1 | AT2G13150 | 40.594 | 101 | 59 | 1 | 101 | 201 | 142 | 241 | 7.22e-17 | 79.3 |
| MS.gene06773.t1 | AT2G42380 | 42.857 | 84 | 48 | 0 | 107 | 190 | 184 | 267 | 1.74e-14 | 72.8 |
| MS.gene06773.t1 | AT3G58120 | 43.750 | 80 | 45 | 0 | 109 | 188 | 202 | 281 | 1.10e-13 | 70.5 |
| MS.gene06773.t1 | AT2G21235 | 38.776 | 98 | 59 | 1 | 109 | 206 | 359 | 455 | 3.30e-13 | 70.5 |
| MS.gene06773.t1 | AT2G42380 | 37.607 | 117 | 55 | 2 | 108 | 217 | 185 | 290 | 3.54e-12 | 66.2 |
Find 97 sgRNAs with CRISPR-Local
Find 272 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGATTCTATCGGCCAATTTC+AGG | 0.184834 | 3.3:+78243208 | MS.gene06773:CDS |
| AACATGGTCCAAACGATCTT+AGG | 0.241223 | 3.3:+78243078 | MS.gene06773:CDS |
| TTTGATTTGATTCAGGATTC+TGG | 0.271099 | 3.3:+78240656 | MS.gene06773:intron |
| CAATGTCCAGCCCCTGAAAT+TGG | 0.281734 | 3.3:-78243220 | None:intergenic |
| CACAATTGAGCAAGTTTATC+AGG | 0.289271 | 3.3:-78240534 | None:intergenic |
| TTTCATTCCCTCTCATCTAA+TGG | 0.291764 | 3.3:+78243119 | MS.gene06773:CDS |
| GTTGCGGTGGTGGTGGATCT+TGG | 0.360501 | 3.3:-78240353 | None:intergenic |
| AGGGGCTGGACATTGGCAAC+AGG | 0.370603 | 3.3:+78243228 | MS.gene06773:CDS |
| TGCATGGCCCTAAGATCGTT+TGG | 0.389186 | 3.3:-78243086 | None:intergenic |
| CCATGCTGATACCTATGGTT+TGG | 0.391118 | 3.3:+78243004 | MS.gene06773:CDS |
| AAAGACCTCTTGGCGCGTTT+AGG | 0.396524 | 3.3:-78240567 | None:intergenic |
| GGTCGAAATCGTCGGGGATT+CGG | 0.403638 | 3.3:-78240287 | None:intergenic |
| GAGTTTGGATCCGGAATTAT+CGG | 0.405371 | 3.3:-78240409 | None:intergenic |
| TTTGCATCAAAAGGCGTTGT+TGG | 0.405645 | 3.3:-78243300 | None:intergenic |
| CGACGATTTCGACCTCGAAA+TGG | 0.407698 | 3.3:+78240296 | MS.gene06773:CDS |
| TACATCGATTCCGATAATTC+CGG | 0.408499 | 3.3:+78240399 | MS.gene06773:CDS |
| CATGCTGATACCTATGGTTT+GGG | 0.409516 | 3.3:+78243005 | MS.gene06773:CDS |
| TTAGTAAAATTTGCATCAAA+AGG | 0.417524 | 3.3:-78243309 | None:intergenic |
| AAACTGAGGCTGGTGGGGAC+TGG | 0.421487 | 3.3:-78243144 | None:intergenic |
| GATTCTATCGGCCAATTTCA+GGG | 0.428325 | 3.3:+78243209 | MS.gene06773:CDS |
| GTGGTGGTGGATCTTGGAAC+TGG | 0.429585 | 3.3:-78240347 | None:intergenic |
| ACCCACTTCATATGATTTGT+CGG | 0.433055 | 3.3:+78243172 | MS.gene06773:CDS |
| TATCGGCCAATTTCAGGGGC+TGG | 0.448809 | 3.3:+78243214 | MS.gene06773:CDS |
| GATAGGCTCAAGCTTGCTAC+TGG | 0.454169 | 3.3:+78242969 | MS.gene06773:CDS |
| ATTGAGATCGACGGTGGAAC+GGG | 0.455173 | 3.3:-78240251 | None:intergenic |
| CATTGAAGAACGAAGTTGAT+AGG | 0.457070 | 3.3:+78242952 | MS.gene06773:CDS |
| ATTTCGAGGTCGAAATCGTC+GGG | 0.457489 | 3.3:-78240294 | None:intergenic |
| TCTCATGTTCTGATGCCTGA+TGG | 0.464397 | 3.3:+78243254 | MS.gene06773:CDS |
| GGCGGTAGGAGAATTGAGTT+TGG | 0.473174 | 3.3:-78240424 | None:intergenic |
| TAGCTTAGCTTGTTGCTCCA+TGG | 0.487772 | 3.3:-78241929 | None:intergenic |
| CTGATAAACTTGCTCAATTG+TGG | 0.489201 | 3.3:+78240535 | MS.gene06773:CDS |
| CGTTTGGACCATGTTGTGGC+TGG | 0.489619 | 3.3:-78243070 | None:intergenic |
| ACAGAAACGGAGGGACCATC+AGG | 0.491647 | 3.3:-78243269 | None:intergenic |
| AGGAGAATTGAGTTTGGATC+CGG | 0.498325 | 3.3:-78240418 | None:intergenic |
| GGAATTGCTACGGCGGTGAC+CGG | 0.499947 | 3.3:-78240454 | None:intergenic |
| TCTTCTTCCTTGTTGTCTGA+AGG | 0.501718 | 3.3:+78240486 | MS.gene06773:CDS |
| CCAACCCATGCTGATACCTA+TGG | 0.503575 | 3.3:+78242999 | MS.gene06773:CDS |
| CAATTTCAGGGGCTGGACAT+TGG | 0.506474 | 3.3:+78243221 | MS.gene06773:CDS |
| AGATCAAACTGAGGCTGGTG+GGG | 0.510809 | 3.3:-78243149 | None:intergenic |
| GTTCCACCGTCGATCTCAAT+CGG | 0.512206 | 3.3:+78240254 | MS.gene06773:CDS |
| ATTATCGGAATCGATGTAAG+AGG | 0.514373 | 3.3:-78240394 | None:intergenic |
| ACATGGTCCAAACGATCTTA+GGG | 0.515048 | 3.3:+78243079 | MS.gene06773:CDS |
| TAGATCAAACTGAGGCTGGT+GGG | 0.518122 | 3.3:-78243150 | None:intergenic |
| TCGTCGTGTTGTTGCGGTGG+TGG | 0.518420 | 3.3:-78240363 | None:intergenic |
| TCGTGTTGTTGCGGTGGTGG+TGG | 0.524797 | 3.3:-78240360 | None:intergenic |
| TCTCCTACCGCCGCTAATGC+CGG | 0.526393 | 3.3:+78240435 | MS.gene06773:CDS |
| CATTTCGAGGTCGAAATCGT+CGG | 0.531230 | 3.3:-78240295 | None:intergenic |
| TGGGTAGATCAAACTGAGGC+TGG | 0.537417 | 3.3:-78243154 | None:intergenic |
| ACGGCGGTGACCGGCATTAG+CGG | 0.537421 | 3.3:-78240445 | None:intergenic |
| AAAATACCGAGTTGAAGCTT+CGG | 0.538764 | 3.3:+78241899 | MS.gene06773:CDS |
| GTTATGTGGTTGAGCTTGAA+AGG | 0.547036 | 3.3:+78240721 | MS.gene06773:CDS |
| CGGAGAAGCGTCGAAGTCGA+AGG | 0.552256 | 3.3:-78240322 | None:intergenic |
| ATGAAAATGTTGCATTTGCA+TGG | 0.556228 | 3.3:-78243102 | None:intergenic |
| TTCCGACAAATCATATGAAG+TGG | 0.557296 | 3.3:-78243174 | None:intergenic |
| GGGGCTGGACATTGGCAACA+GGG | 0.559117 | 3.3:+78243229 | MS.gene06773:CDS |
| CTGCGGCGAGGTCGAAAGAG+AGG | 0.561569 | 3.3:+78240691 | MS.gene06773:CDS |
| GATTGAGATCGACGGTGGAA+CGG | 0.569204 | 3.3:-78240252 | None:intergenic |
| CGGAATCGATGTAAGAGGAA+AGG | 0.570255 | 3.3:-78240389 | None:intergenic |
| AGGAGATCGTCGTGTTGTTG+CGG | 0.570948 | 3.3:-78240369 | None:intergenic |
| ATGTATCGGCGGAATTGCTA+CGG | 0.574251 | 3.3:-78240464 | None:intergenic |
| AGAGAGGAAAGCTTGTTATG+TGG | 0.577168 | 3.3:+78240707 | MS.gene06773:CDS |
| AGATCGTTTGGACCATGTTG+TGG | 0.578580 | 3.3:-78243074 | None:intergenic |
| GACTGGATCCATTAGATGAG+AGG | 0.584227 | 3.3:-78243127 | None:intergenic |
| AGTCGAAGGGATCCATTTCG+AGG | 0.586525 | 3.3:-78240308 | None:intergenic |
| TTGATGCATTCCCAAACCAT+AGG | 0.589815 | 3.3:-78243015 | None:intergenic |
| CAACAAGGAAGAAGATGTAT+CGG | 0.593104 | 3.3:-78240478 | None:intergenic |
| ACTGGATCCATTAGATGAGA+GGG | 0.595904 | 3.3:-78243126 | None:intergenic |
| GTAGATCAAACTGAGGCTGG+TGG | 0.597370 | 3.3:-78243151 | None:intergenic |
| ATTCTATCGGCCAATTTCAG+GGG | 0.601347 | 3.3:+78243210 | MS.gene06773:CDS |
| GAAGCTTCGGTTACAAACCA+TGG | 0.603767 | 3.3:+78241912 | MS.gene06773:CDS |
| CAACAAGCTAAGCTATGTGA+TGG | 0.613164 | 3.3:+78241937 | MS.gene06773:CDS |
| TTCGATTCCTTCAGACAACA+AGG | 0.616363 | 3.3:-78240493 | None:intergenic |
| GGAGAAGCGTCGAAGTCGAA+GGG | 0.620947 | 3.3:-78240321 | None:intergenic |
| TTGTAACCGAAGCTTCAACT+CGG | 0.625038 | 3.3:-78241905 | None:intergenic |
| TCCGACAAATCATATGAAGT+GGG | 0.627186 | 3.3:-78243173 | None:intergenic |
| AGATCGTCGTGTTGTTGCGG+TGG | 0.629335 | 3.3:-78240366 | None:intergenic |
| CTTGGCGCGTTTAGGATCAA+CGG | 0.630373 | 3.3:-78240559 | None:intergenic |
| ATGTTGTGGCTGGTGCATGA+AGG | 0.637404 | 3.3:-78243060 | None:intergenic |
| TTCATGCACCAGCCACAACA+TGG | 0.640783 | 3.3:+78243062 | MS.gene06773:CDS |
| CCAAACCATAGGTATCAGCA+TGG | 0.641882 | 3.3:-78243004 | None:intergenic |
| GGTGGATCTTGGAACTGGAG+CGG | 0.658797 | 3.3:-78240342 | None:intergenic |
| CCATAGGTATCAGCATGGGT+TGG | 0.661247 | 3.3:-78242999 | None:intergenic |
| CAAACCATAGGTATCAGCAT+GGG | 0.662566 | 3.3:-78243003 | None:intergenic |
| TTGATCCTAAACGCGCCAAG+AGG | 0.666281 | 3.3:+78240562 | MS.gene06773:CDS |
| GCTCAAGCTTGCTACTGGAG+AGG | 0.667501 | 3.3:+78242974 | MS.gene06773:CDS |
| CGAATCGTCAATCTGCGGCG+AGG | 0.667585 | 3.3:+78240679 | MS.gene06773:CDS |
| CCTCCGATTGAGATCGACGG+TGG | 0.668695 | 3.3:-78240257 | None:intergenic |
| CAAGGAAGAAGATGTATCGG+CGG | 0.669677 | 3.3:-78240475 | None:intergenic |
| TGACCGGCATTAGCGGCGGT+AGG | 0.676875 | 3.3:-78240438 | None:intergenic |
| ATGTTGTCAAGTGATTCTAT+CGG | 0.677885 | 3.3:+78243197 | MS.gene06773:CDS |
| TATCGGCGGAATTGCTACGG+CGG | 0.692611 | 3.3:-78240461 | None:intergenic |
| CCACCGTCGATCTCAATCGG+AGG | 0.695045 | 3.3:+78240257 | MS.gene06773:CDS |
| GCGGTGACCGGCATTAGCGG+CGG | 0.701383 | 3.3:-78240442 | None:intergenic |
| GTACCTCCGATTGAGATCGA+CGG | 0.703198 | 3.3:-78240260 | None:intergenic |
| TTTCGAGGTCGAAATCGTCG+GGG | 0.718515 | 3.3:-78240293 | None:intergenic |
| TCTGGCGAATCGTCAATCTG+CGG | 0.734478 | 3.3:+78240674 | MS.gene06773:CDS |
| GAAGTGGGTAGATCAAACTG+AGG | 0.754115 | 3.3:-78243158 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATTTTTTTTTTTTCCATT+GGG | + | chr3.3:78241683-78241702 | MS.gene06773:intron | 10.0% |
| !! | ATAAATTGAGCTAAATTAAT+AGG | - | chr3.3:78242667-78242686 | None:intergenic | 15.0% |
| !! | GAAAAAAAAAAAATAACCAA+AGG | - | chr3.3:78241679-78241698 | None:intergenic | 15.0% |
| !!! | GTTATTTTTTTTTTTTCCAT+TGG | + | chr3.3:78241682-78241701 | MS.gene06773:intron | 15.0% |
| !!! | TAATATTTTTGATTCAACTT+AGG | - | chr3.3:78240824-78240843 | None:intergenic | 15.0% |
| !! | AAAAAAAATAACCAAAGGAT+AGG | - | chr3.3:78241674-78241693 | None:intergenic | 20.0% |
| !! | AAAAAAATAACCAAAGGATA+GGG | - | chr3.3:78241673-78241692 | None:intergenic | 20.0% |
| !! | AAACAAATGAAAGATATCTT+CGG | - | chr3.3:78242189-78242208 | None:intergenic | 20.0% |
| !! | ATAGACAAAACATTAATGTT+TGG | - | chr3.3:78242289-78242308 | None:intergenic | 20.0% |
| !! | ATATAAGGAATTTAACAAAC+TGG | - | chr3.3:78241790-78241809 | None:intergenic | 20.0% |
| !! | GTTGGAAATATATAGAAAAA+TGG | - | chr3.3:78241245-78241264 | None:intergenic | 20.0% |
| !!! | ACATGATTATATATTTGTTG+TGG | + | chr3.3:78240892-78240911 | MS.gene06773:intron | 20.0% |
| !!! | TAATTTTAGTCTCTTAAGTT+TGG | + | chr3.3:78242122-78242141 | MS.gene06773:intron | 20.0% |
| ! | AAAAAATTACATGTCATACG+AGG | - | chr3.3:78242450-78242469 | None:intergenic | 25.0% |
| ! | ACAAAACATTAATGTTTGGA+CGG | - | chr3.3:78242285-78242304 | None:intergenic | 25.0% |
| ! | AGTTCAATTAAAGGAAACAA+AGG | - | chr3.3:78241761-78241780 | None:intergenic | 25.0% |
| ! | ATTTATCACTACTTCAACTA+AGG | + | chr3.3:78242723-78242742 | MS.gene06773:intron | 25.0% |
| ! | GATATTCTAACAGAAACTAT+AGG | - | chr3.3:78242167-78242186 | None:intergenic | 25.0% |
| ! | GCCTTCAAAAAAAAAAAAGA+GGG | + | chr3.3:78241619-78241638 | MS.gene06773:intron | 25.0% |
| ! | TACAGCATTTATCCTTTAAA+TGG | - | chr3.3:78242380-78242399 | None:intergenic | 25.0% |
| ! | TAGCTTACATTCTTAGTAAT+TGG | + | chr3.3:78242525-78242544 | MS.gene06773:intron | 25.0% |
| ! | TCAGTGTTAAACTAAGTTAA+TGG | - | chr3.3:78242063-78242082 | None:intergenic | 25.0% |
| ! | TGTTAAATTCCTTATATCAG+TGG | + | chr3.3:78241793-78241812 | MS.gene06773:intron | 25.0% |
| ! | TTACATTCTTAGTAATTGGA+TGG | + | chr3.3:78242529-78242548 | MS.gene06773:intron | 25.0% |
| ! | TTCCATCAGTATAATATGAA+AGG | + | chr3.3:78242037-78242056 | MS.gene06773:intron | 25.0% |
| ! | TTGTTTCCTTTAATTGAACT+TGG | + | chr3.3:78241761-78241780 | MS.gene06773:intron | 25.0% |
| !! | TCATTGAATTGAAAAGTATG+AGG | - | chr3.3:78242259-78242278 | None:intergenic | 25.0% |
| !!! | AAAACAGAAACACTACTTTT+AGG | - | chr3.3:78242830-78242849 | None:intergenic | 25.0% |
| !!! | GTTGGTTTTATTAACAGAAA+CGG | - | chr3.3:78243285-78243304 | None:intergenic | 25.0% |
| !!! | TATATTTGTTGTGAAGCTTA+AGG | + | chr3.3:78240901-78240920 | MS.gene06773:intron | 25.0% |
| !!! | TCCCTCTTTTTTTTTTTTGA+AGG | - | chr3.3:78241623-78241642 | None:intergenic | 25.0% |
| AAATTCCTTATATCAGTGGT+GGG | + | chr3.3:78241797-78241816 | MS.gene06773:intron | 30.0% | |
| AATAAAAAATCCCCCTCATT+TGG | + | chr3.3:78241042-78241061 | MS.gene06773:intron | 30.0% | |
| ATAAAAAATCCCCCTCATTT+GGG | + | chr3.3:78241043-78241062 | MS.gene06773:intron | 30.0% | |
| ATGAAAATGTTGCATTTGCA+TGG | - | chr3.3:78243105-78243124 | None:intergenic | 30.0% | |
| ATGTACAACGATTTGAAAAC+TGG | - | chr3.3:78242798-78242817 | None:intergenic | 30.0% | |
| ATGTTGTCAAGTGATTCTAT+CGG | + | chr3.3:78243197-78243216 | MS.gene06773:CDS | 30.0% | |
| CAATTACAAACTAAATGAGC+TGG | + | chr3.3:78242402-78242421 | MS.gene06773:intron | 30.0% | |
| CACTGAATTAATGTAAGCAT+CGG | + | chr3.3:78242077-78242096 | MS.gene06773:intron | 30.0% | |
| CAGCAAAACAAGAAAAAACA+AGG | - | chr3.3:78241999-78242018 | None:intergenic | 30.0% | |
| GAAGTAGTGATAAATGAACA+TGG | - | chr3.3:78242718-78242737 | None:intergenic | 30.0% | |
| GGCCTTCAAAAAAAAAAAAG+AGG | + | chr3.3:78241618-78241637 | MS.gene06773:intron | 30.0% | |
| TAAAGTGTAGCATATTTGCA+TGG | - | chr3.3:78241973-78241992 | None:intergenic | 30.0% | |
| TAAATTCCTTATATCAGTGG+TGG | + | chr3.3:78241796-78241815 | MS.gene06773:intron | 30.0% | |
| TATTAATATTTGAGCCTACG+TGG | + | chr3.3:78242310-78242329 | MS.gene06773:intron | 30.0% | |
| TGGAAACCAAGTTCAATTAA+AGG | - | chr3.3:78241770-78241789 | None:intergenic | 30.0% | |
| TGGAAGAAATAGAAGACATT+GGG | + | chr3.3:78240985-78241004 | MS.gene06773:intron | 30.0% | |
| TTGGATGGTATATTAACACT+TGG | + | chr3.3:78242544-78242563 | MS.gene06773:intron | 30.0% | |
| ! | TGCTCAATTAAATCTTTTCC+AGG | + | chr3.3:78240782-78240801 | MS.gene06773:CDS | 30.0% |
| ! | TTCATTCATTTGGAAAGTGT+GGG | + | chr3.3:78242574-78242593 | MS.gene06773:intron | 30.0% |
| !! | CAGCTCATTTAGTTTGTAAT+TGG | - | chr3.3:78242404-78242423 | None:intergenic | 30.0% |
| !! | GTTTTATTAACAGAAACGGA+GGG | - | chr3.3:78243281-78243300 | None:intergenic | 30.0% |
| !! | TGGCAGTTCATTTTTCAAAA+TGG | + | chr3.3:78241730-78241749 | MS.gene06773:intron | 30.0% |
| !! | TTTGATTTGATTCAGGATTC+TGG | + | chr3.3:78240656-78240675 | MS.gene06773:intron | 30.0% |
| !!! | CTTGTTTTTTCTTGTTTTGC+TGG | + | chr3.3:78241997-78242016 | MS.gene06773:intron | 30.0% |
| !!! | GAACTTGTTTTTATAGATCG+TGG | + | chr3.3:78240632-78240651 | MS.gene06773:intron | 30.0% |
| !!! | TTTTTTTTCCATTGGGCTAT+TGG | + | chr3.3:78241690-78241709 | MS.gene06773:intron | 30.0% |
| AAGAAATAGAAGACATTGGG+AGG | + | chr3.3:78240988-78241007 | MS.gene06773:intron | 35.0% | |
| ACTAGTCATTGAAGTAGTGA+AGG | - | chr3.3:78242775-78242794 | None:intergenic | 35.0% | |
| AGTCTCTTAAGTTTGGTAGA+TGG | + | chr3.3:78242129-78242148 | MS.gene06773:intron | 35.0% | |
| ATTAACTACACAGCCCATTT+AGG | - | chr3.3:78241314-78241333 | None:intergenic | 35.0% | |
| ATTATCGGAATCGATGTAAG+AGG | - | chr3.3:78240397-78240416 | None:intergenic | 35.0% | |
| CAACAAGGAAGAAGATGTAT+CGG | - | chr3.3:78240481-78240500 | None:intergenic | 35.0% | |
| CACAATTGAGCAAGTTTATC+AGG | - | chr3.3:78240537-78240556 | None:intergenic | 35.0% | |
| CGTATGAAGATTCTGTTCAA+GGG | + | chr3.3:78241542-78241561 | MS.gene06773:intron | 35.0% | |
| CTTCATTCATTTGGAAAGTG+TGG | + | chr3.3:78242573-78242592 | MS.gene06773:intron | 35.0% | |
| GAACTCAAAAATTGCATTGG+GGG | + | chr3.3:78241067-78241086 | MS.gene06773:intron | 35.0% | |
| GCATTAAAAGAAAGACCTCT+TGG | - | chr3.3:78240580-78240599 | None:intergenic | 35.0% | |
| GGAACTCAAAAATTGCATTG+GGG | + | chr3.3:78241066-78241085 | MS.gene06773:intron | 35.0% | |
| GGCCTTTCATATTATACTGA+TGG | - | chr3.3:78242042-78242061 | None:intergenic | 35.0% | |
| GGGAACTCAAAAATTGCATT+GGG | + | chr3.3:78241065-78241084 | MS.gene06773:intron | 35.0% | |
| GTCTCTTAAGTTTGGTAGAT+GGG | + | chr3.3:78242130-78242149 | MS.gene06773:intron | 35.0% | |
| GTGGAAGAAATAGAAGACAT+TGG | + | chr3.3:78240984-78241003 | MS.gene06773:intron | 35.0% | |
| TAAAAAATCCCCCTCATTTG+GGG | + | chr3.3:78241044-78241063 | MS.gene06773:intron | 35.0% | |
| TCCGACAAATCATATGAAGT+GGG | - | chr3.3:78243176-78243195 | None:intergenic | 35.0% | |
| TCGTATGAAGATTCTGTTCA+AGG | + | chr3.3:78241541-78241560 | MS.gene06773:intron | 35.0% | |
| TGACATGGTAGTCCATTTAA+AGG | + | chr3.3:78242365-78242384 | MS.gene06773:intron | 35.0% | |
| TGGTCTAGACTTCATTCATT+TGG | + | chr3.3:78242564-78242583 | MS.gene06773:intron | 35.0% | |
| TTAATAGGATGTCAACCGAA+AGG | - | chr3.3:78242652-78242671 | None:intergenic | 35.0% | |
| TTCCGACAAATCATATGAAG+TGG | - | chr3.3:78243177-78243196 | None:intergenic | 35.0% | |
| TTTCATTCCCTCTCATCTAA+TGG | + | chr3.3:78243119-78243138 | MS.gene06773:CDS | 35.0% | |
| ! | AAAATACCGAGTTGAAGCTT+CGG | + | chr3.3:78241899-78241918 | MS.gene06773:CDS | 35.0% |
| ! | ACCCACTTCATATGATTTGT+CGG | + | chr3.3:78243172-78243191 | MS.gene06773:CDS | 35.0% |
| ! | CATTGAAGAACGAAGTTGAT+AGG | + | chr3.3:78242952-78242971 | MS.gene06773:CDS | 35.0% |
| ! | CTGATAAACTTGCTCAATTG+TGG | + | chr3.3:78240535-78240554 | MS.gene06773:CDS | 35.0% |
| ! | TTTGTTGTGGCCATTAATGA+GGG | + | chr3.3:78241504-78241523 | MS.gene06773:intron | 35.0% |
| !! | ATTTGTTGTGGCCATTAATG+AGG | + | chr3.3:78241503-78241522 | MS.gene06773:intron | 35.0% |
| !! | TACATCGATTCCGATAATTC+CGG | + | chr3.3:78240399-78240418 | MS.gene06773:CDS | 35.0% |
| !! | TCGTGGATTTGATTTGATTC+AGG | + | chr3.3:78240649-78240668 | MS.gene06773:intron | 35.0% |
| !! | TGAAGCTTAAGGCTTTGTTT+GGG | + | chr3.3:78240912-78240931 | MS.gene06773:intron | 35.0% |
| !!! | CTTTTTCAGAGAGATACAAC+TGG | + | chr3.3:78241865-78241884 | MS.gene06773:intron | 35.0% |
| !!! | GGTTTTATTAACAGAAACGG+AGG | - | chr3.3:78243282-78243301 | None:intergenic | 35.0% |
| !!! | GGTTTTGATTCATGGTTCAT+TGG | - | chr3.3:78242754-78242773 | None:intergenic | 35.0% |
| !!! | GTAGTGAAGGTTTTGATTCA+TGG | - | chr3.3:78242762-78242781 | None:intergenic | 35.0% |
| AAAAAATCCCCCTCATTTGG+GGG | + | chr3.3:78241045-78241064 | MS.gene06773:intron | 40.0% | |
| AAAGCAAACCAATAGCCCAA+TGG | - | chr3.3:78241701-78241720 | None:intergenic | 40.0% | |
| AAAGGATAGGGTAACTGTTC+TGG | - | chr3.3:78241661-78241680 | None:intergenic | 40.0% | |
| AACATGGTCCAAACGATCTT+AGG | + | chr3.3:78243078-78243097 | MS.gene06773:CDS | 40.0% | |
| AAGTTAGGGAGAGAGCAATA+AGG | + | chr3.3:78241440-78241459 | MS.gene06773:intron | 40.0% | |
| ACATGGTCCAAACGATCTTA+GGG | + | chr3.3:78243079-78243098 | MS.gene06773:CDS | 40.0% | |
| ACTCCCAAACAAAGCCTAAA+TGG | + | chr3.3:78241297-78241316 | MS.gene06773:intron | 40.0% | |
| ACTGGATCCATTAGATGAGA+GGG | - | chr3.3:78243129-78243148 | None:intergenic | 40.0% | |
| AGAACAGTTACCCTATCCTT+TGG | + | chr3.3:78241660-78241679 | MS.gene06773:intron | 40.0% | |
| AGGAGAATTGAGTTTGGATC+CGG | - | chr3.3:78240421-78240440 | None:intergenic | 40.0% | |
| AGTGATAAATCCGATCAGAG+AGG | + | chr3.3:78241347-78241366 | MS.gene06773:intron | 40.0% | |
| AGTTAGGGAGAGAGCAATAA+GGG | + | chr3.3:78241441-78241460 | MS.gene06773:intron | 40.0% | |
| ATAAATCCGATCAGAGAGGT+AGG | + | chr3.3:78241351-78241370 | MS.gene06773:intron | 40.0% | |
| ATTCTATCGGCCAATTTCAG+GGG | + | chr3.3:78243210-78243229 | MS.gene06773:CDS | 40.0% | |
| CAAACCATAGGTATCAGCAT+GGG | - | chr3.3:78243006-78243025 | None:intergenic | 40.0% | |
| CAACAAGCTAAGCTATGTGA+TGG | + | chr3.3:78241937-78241956 | MS.gene06773:CDS | 40.0% | |
| CATGCTGATACCTATGGTTT+GGG | + | chr3.3:78243005-78243024 | MS.gene06773:CDS | 40.0% | |
| CTACAGTGATTGAAGCCTTT+CGG | + | chr3.3:78242634-78242653 | MS.gene06773:intron | 40.0% | |
| CTCCCAAACAAAGCCTAAAT+GGG | + | chr3.3:78241298-78241317 | MS.gene06773:intron | 40.0% | |
| GAGTTTGGATCCGGAATTAT+CGG | - | chr3.3:78240412-78240431 | None:intergenic | 40.0% | |
| GATTCTATCGGCCAATTTCA+GGG | + | chr3.3:78243209-78243228 | MS.gene06773:CDS | 40.0% | |
| GGCAATGATGAGTAATAACC+TGG | - | chr3.3:78240803-78240822 | None:intergenic | 40.0% | |
| GGGGAACTCAAAAATTGCAT+TGG | + | chr3.3:78241064-78241083 | MS.gene06773:intron | 40.0% | |
| GTTATGTGGTTGAGCTTGAA+AGG | + | chr3.3:78240721-78240740 | MS.gene06773:CDS | 40.0% | |
| TCAAAAATTGCATTGGGGGA+GGG | + | chr3.3:78241071-78241090 | MS.gene06773:intron | 40.0% | |
| TCACAAACCATAATCCACGT+AGG | - | chr3.3:78242327-78242346 | None:intergenic | 40.0% | |
| TGATTCTATCGGCCAATTTC+AGG | + | chr3.3:78243208-78243227 | MS.gene06773:CDS | 40.0% | |
| TTCGATTCCTTCAGACAACA+AGG | - | chr3.3:78240496-78240515 | None:intergenic | 40.0% | |
| TTGATGCATTCCCAAACCAT+AGG | - | chr3.3:78243018-78243037 | None:intergenic | 40.0% | |
| TTGTAACCGAAGCTTCAACT+CGG | - | chr3.3:78241908-78241927 | None:intergenic | 40.0% | |
| TTTCAACCTACCTCTCTGAT+CGG | - | chr3.3:78241360-78241379 | None:intergenic | 40.0% | |
| ! | ATAGGGTAACTGTTCTGGAT+TGG | - | chr3.3:78241656-78241675 | None:intergenic | 40.0% |
| ! | ATCAGAGAGGTAGGTTGAAA+TGG | + | chr3.3:78241360-78241379 | MS.gene06773:intron | 40.0% |
| ! | ATTTGAGCCTACGTGGATTA+TGG | + | chr3.3:78242317-78242336 | MS.gene06773:intron | 40.0% |
| ! | TCTTCTTCCTTGTTGTCTGA+AGG | + | chr3.3:78240486-78240505 | MS.gene06773:CDS | 40.0% |
| !! | AGAGAGGAAAGCTTGTTATG+TGG | + | chr3.3:78240707-78240726 | MS.gene06773:CDS | 40.0% |
| !! | AGCCCATTTAGGCTTTGTTT+GGG | - | chr3.3:78241303-78241322 | None:intergenic | 40.0% |
| !! | GTGAAGCTTAAGGCTTTGTT+TGG | + | chr3.3:78240911-78240930 | MS.gene06773:intron | 40.0% |
| !! | TAAGGCTTTGTTTGGGAGTT+TGG | + | chr3.3:78240919-78240938 | MS.gene06773:intron | 40.0% |
| !! | TTAGGCTTTGTTTGGGAGTT+TGG | - | chr3.3:78241296-78241315 | None:intergenic | 40.0% |
| !!! | GAGGGTTTTGGAAAAAAGGA+AGG | + | chr3.3:78240956-78240975 | MS.gene06773:intron | 40.0% |
| !!! | TGGTTTGCTTTTCACTCTTG+TGG | + | chr3.3:78241710-78241729 | MS.gene06773:intron | 40.0% |
| !!! | TTTTGAGTTCCCCCAAATGA+GGG | - | chr3.3:78241057-78241076 | None:intergenic | 40.0% |
| !!! | TTTTTGAGTTCCCCCAAATG+AGG | - | chr3.3:78241058-78241077 | None:intergenic | 40.0% |
| AACGTCCCAACCCTCATTAA+TGG | - | chr3.3:78241517-78241536 | None:intergenic | 45.0% | |
| ACCATATTCACAGGTGGAGT+GGG | + | chr3.3:78241597-78241616 | MS.gene06773:intron | 45.0% | |
| AGATCGTTTGGACCATGTTG+TGG | - | chr3.3:78243077-78243096 | None:intergenic | 45.0% | |
| AGCACTCTGACGCTTAAGTT+AGG | + | chr3.3:78241425-78241444 | MS.gene06773:intron | 45.0% | |
| ATAGAAGACATTGGGAGGAG+AGG | + | chr3.3:78240993-78241012 | MS.gene06773:intron | 45.0% | |
| ATTTCGAGGTCGAAATCGTC+GGG | - | chr3.3:78240297-78240316 | None:intergenic | 45.0% | |
| CAAAAATTGCATTGGGGGAG+GGG | + | chr3.3:78241072-78241091 | MS.gene06773:intron | 45.0% | |
| CAAGGAAGAAGATGTATCGG+CGG | - | chr3.3:78240478-78240497 | None:intergenic | 45.0% | |
| CATTTCGAGGTCGAAATCGT+CGG | - | chr3.3:78240298-78240317 | None:intergenic | 45.0% | |
| CCAAACCATAGGTATCAGCA+TGG | - | chr3.3:78243007-78243026 | None:intergenic | 45.0% | |
| CCATGCTGATACCTATGGTT+TGG | + | chr3.3:78243004-78243023 | MS.gene06773:CDS | 45.0% | |
| CGGAATCGATGTAAGAGGAA+AGG | - | chr3.3:78240392-78240411 | None:intergenic | 45.0% | |
| CGTCTGTAGCGATGACATTA+GGG | + | chr3.3:78241390-78241409 | MS.gene06773:intron | 45.0% | |
| CTCAAAAATTGCATTGGGGG+AGG | + | chr3.3:78241070-78241089 | MS.gene06773:intron | 45.0% | |
| GAAAGCCCACCACTGATATA+AGG | - | chr3.3:78241805-78241824 | None:intergenic | 45.0% | |
| GAAGCTTCGGTTACAAACCA+TGG | + | chr3.3:78241912-78241931 | MS.gene06773:CDS | 45.0% | |
| GAAGTGGGTAGATCAAACTG+AGG | - | chr3.3:78243161-78243180 | None:intergenic | 45.0% | |
| GACTGGATCCATTAGATGAG+AGG | - | chr3.3:78243130-78243149 | None:intergenic | 45.0% | |
| GCACTCTGACGCTTAAGTTA+GGG | + | chr3.3:78241426-78241445 | MS.gene06773:intron | 45.0% | |
| GGAAAAAAGGAAGGAGCAAG+TGG | + | chr3.3:78240965-78240984 | MS.gene06773:intron | 45.0% | |
| GTCAACTGTCTCAGATGACA+TGG | + | chr3.3:78242350-78242369 | MS.gene06773:intron | 45.0% | |
| GTCTGTAGCGATGACATTAG+GGG | + | chr3.3:78241391-78241410 | MS.gene06773:intron | 45.0% | |
| GTTCAAGGGAATCTGTGTGT+GGG | + | chr3.3:78241556-78241575 | MS.gene06773:intron | 45.0% | |
| TAATGAGGGTTGGGACGTTA+TGG | + | chr3.3:78241518-78241537 | MS.gene06773:intron | 45.0% | |
| TAGAAGACATTGGGAGGAGA+GGG | + | chr3.3:78240994-78241013 | MS.gene06773:intron | 45.0% | |
| TAGATCAAACTGAGGCTGGT+GGG | - | chr3.3:78243153-78243172 | None:intergenic | 45.0% | |
| TCTCATGTTCTGATGCCTGA+TGG | + | chr3.3:78243254-78243273 | MS.gene06773:CDS | 45.0% | |
| TGTGGCCATTAATGAGGGTT+GGG | + | chr3.3:78241509-78241528 | MS.gene06773:intron | 45.0% | |
| TGTTCAAGGGAATCTGTGTG+TGG | + | chr3.3:78241555-78241574 | MS.gene06773:intron | 45.0% | |
| TTGGACTCCACCATATTCAC+AGG | + | chr3.3:78241588-78241607 | MS.gene06773:intron | 45.0% | |
| TTGTGGCCATTAATGAGGGT+TGG | + | chr3.3:78241508-78241527 | MS.gene06773:intron | 45.0% | |
| ! | ATGTATCGGCGGAATTGCTA+CGG | - | chr3.3:78240467-78240486 | None:intergenic | 45.0% |
| ! | CTTTGTTTGGGAGTTTGGAG+GGG | + | chr3.3:78240924-78240943 | MS.gene06773:intron | 45.0% |
| ! | CTTTGTTTGGGAGTTTGGAG+GGG | - | chr3.3:78240943-78240924 | None:intergenic | 45.0% |
| ! | TTTGAGTTCCCCCAAATGAG+GGG | - | chr3.3:78241056-78241075 | None:intergenic | 45.0% |
| ! | TTTGGAAAGTGTGGGTGACT+TGG | + | chr3.3:78242582-78242601 | MS.gene06773:intron | 45.0% |
| !! | CAGCCCATTTAGGCTTTGTT+TGG | - | chr3.3:78241304-78241323 | None:intergenic | 45.0% |
| !! | GCTTTGTTTGGGAGTTTGGA+GGG | + | chr3.3:78240923-78240942 | MS.gene06773:intron | 45.0% |
| !! | GCTTTGTTTGGGAGTTTGGA+GGG | - | chr3.3:78240942-78240923 | None:intergenic | 45.0% |
| !! | TAGCTTAGCTTGTTGCTCCA+TGG | - | chr3.3:78241932-78241951 | None:intergenic | 45.0% |
| !!! | AGGGGAGGGTTTTGGAAAAA+AGG | + | chr3.3:78240952-78240971 | MS.gene06773:intron | 45.0% |
| !!! | ATAATTATTATTTTTAAAAC+TGG | - | chr3.3:78242906-78242925 | None:intergenic | 5.0% |
| AAAGACCTCTTGGCGCGTTT+AGG | - | chr3.3:78240570-78240589 | None:intergenic | 50.0% | |
| AGATCAAACTGAGGCTGGTG+GGG | - | chr3.3:78243152-78243171 | None:intergenic | 50.0% | |
| AGTCGAAGGGATCCATTTCG+AGG | - | chr3.3:78240311-78240330 | None:intergenic | 50.0% | |
| ATGTTGTGGCTGGTGCATGA+AGG | - | chr3.3:78243063-78243082 | None:intergenic | 50.0% | |
| ATTGAGATCGACGGTGGAAC+GGG | - | chr3.3:78240254-78240273 | None:intergenic | 50.0% | |
| CAATGTCCAGCCCCTGAAAT+TGG | - | chr3.3:78243223-78243242 | None:intergenic | 50.0% | |
| CAATTTCAGGGGCTGGACAT+TGG | + | chr3.3:78243221-78243240 | MS.gene06773:CDS | 50.0% | |
| CACCATATTCACAGGTGGAG+TGG | + | chr3.3:78241596-78241615 | MS.gene06773:intron | 50.0% | |
| CACTCCACCTGTGAATATGG+TGG | - | chr3.3:78241598-78241617 | None:intergenic | 50.0% | |
| CCAACCCATGCTGATACCTA+TGG | + | chr3.3:78242999-78243018 | MS.gene06773:CDS | 50.0% | |
| CCATAGGTATCAGCATGGGT+TGG | - | chr3.3:78243002-78243021 | None:intergenic | 50.0% | |
| CGACGATTTCGACCTCGAAA+TGG | + | chr3.3:78240296-78240315 | MS.gene06773:CDS | 50.0% | |
| GACTCCACCATATTCACAGG+TGG | + | chr3.3:78241591-78241610 | MS.gene06773:intron | 50.0% | |
| GATTGAGATCGACGGTGGAA+CGG | - | chr3.3:78240255-78240274 | None:intergenic | 50.0% | |
| GCGTCTGTAGCGATGACATT+AGG | + | chr3.3:78241389-78241408 | MS.gene06773:intron | 50.0% | |
| GGCGGTAGGAGAATTGAGTT+TGG | - | chr3.3:78240427-78240446 | None:intergenic | 50.0% | |
| GTACCTCCGATTGAGATCGA+CGG | - | chr3.3:78240263-78240282 | None:intergenic | 50.0% | |
| GTAGATCAAACTGAGGCTGG+TGG | - | chr3.3:78243154-78243173 | None:intergenic | 50.0% | |
| GTTCCACCGTCGATCTCAAT+CGG | + | chr3.3:78240254-78240273 | MS.gene06773:CDS | 50.0% | |
| TCTGGCGAATCGTCAATCTG+CGG | + | chr3.3:78240674-78240693 | MS.gene06773:CDS | 50.0% | |
| TGCAACGACTTGAGCTGACA+TGG | - | chr3.3:78242482-78242501 | None:intergenic | 50.0% | |
| TGCATGGCCCTAAGATCGTT+TGG | - | chr3.3:78243089-78243108 | None:intergenic | 50.0% | |
| TGGGTAGATCAAACTGAGGC+TGG | - | chr3.3:78243157-78243176 | None:intergenic | 50.0% | |
| TGTAGCGATGACATTAGGGG+TGG | + | chr3.3:78241394-78241413 | MS.gene06773:intron | 50.0% | |
| TGTGTGTGGGAACGTCGAAT+TGG | + | chr3.3:78241569-78241588 | MS.gene06773:intron | 50.0% | |
| TTCATGCACCAGCCACAACA+TGG | + | chr3.3:78243062-78243081 | MS.gene06773:CDS | 50.0% | |
| TTGAGTTCCCCCAAATGAGG+GGG | - | chr3.3:78241055-78241074 | None:intergenic | 50.0% | |
| TTGATCCTAAACGCGCCAAG+AGG | + | chr3.3:78240562-78240581 | MS.gene06773:CDS | 50.0% | |
| TTTCGAGGTCGAAATCGTCG+GGG | - | chr3.3:78240296-78240315 | None:intergenic | 50.0% | |
| TTTGGGAGTTTGGAGGGGAA+GGG | - | chr3.3:78241286-78241305 | None:intergenic | 50.0% | |
| ! | AGGAGATCGTCGTGTTGTTG+CGG | - | chr3.3:78240372-78240391 | None:intergenic | 50.0% |
| ! | CTTGGCGCGTTTAGGATCAA+CGG | - | chr3.3:78240562-78240581 | None:intergenic | 50.0% |
| !! | GATAGGCTCAAGCTTGCTAC+TGG | + | chr3.3:78242969-78242988 | MS.gene06773:CDS | 50.0% |
| !! | GGCTTTGTTTGGGAGTTTGG+AGG | + | chr3.3:78240922-78240941 | MS.gene06773:intron | 50.0% |
| !! | GGCTTTGTTTGGGAGTTTGG+AGG | - | chr3.3:78240941-78240922 | None:intergenic | 50.0% |
| ACAGAAACGGAGGGACCATC+AGG | - | chr3.3:78243272-78243291 | None:intergenic | 55.0% | |
| ATTGCATTGGGGGAGGGGTT+TGG | + | chr3.3:78241077-78241096 | MS.gene06773:intron | 55.0% | |
| CGACTTGAGCTGACATGGCA+TGG | - | chr3.3:78242477-78242496 | None:intergenic | 55.0% | |
| CGTTTGGACCATGTTGTGGC+TGG | - | chr3.3:78243073-78243092 | None:intergenic | 55.0% | |
| GCCCACTCCACCTGTGAATA+TGG | - | chr3.3:78241601-78241620 | None:intergenic | 55.0% | |
| GGTCGAAATCGTCGGGGATT+CGG | - | chr3.3:78240290-78240309 | None:intergenic | 55.0% | |
| GGTGGATCTTGGAACTGGAG+CGG | - | chr3.3:78240345-78240364 | None:intergenic | 55.0% | |
| GTTTGGGAGTTTGGAGGGGA+AGG | - | chr3.3:78240947-78240928 | None:intergenic | 55.0% | |
| GTTTGGGAGTTTGGAGGGGA+GGG | + | chr3.3:78240928-78240947 | MS.gene06773:intron | 55.0% | |
| TATCGGCCAATTTCAGGGGC+TGG | + | chr3.3:78243214-78243233 | MS.gene06773:CDS | 55.0% | |
| TATCGGCGGAATTGCTACGG+CGG | - | chr3.3:78240464-78240483 | None:intergenic | 55.0% | |
| TGTTTGGGAGTTTGGAGGGG+AGG | + | chr3.3:78240927-78240946 | MS.gene06773:intron | 55.0% | |
| TTGCATTGGGGGAGGGGTTT+GGG | + | chr3.3:78241078-78241097 | MS.gene06773:intron | 55.0% | |
| TTTGGGAGTTTGGAGGGGAG+GGG | + | chr3.3:78240929-78240948 | MS.gene06773:intron | 55.0% | |
| ! | AGATCGTCGTGTTGTTGCGG+TGG | - | chr3.3:78240369-78240388 | None:intergenic | 55.0% |
| !! | GCTCAAGCTTGCTACTGGAG+AGG | + | chr3.3:78242974-78242993 | MS.gene06773:CDS | 55.0% |
| !! | GGAGAAGCGTCGAAGTCGAA+GGG | - | chr3.3:78240324-78240343 | None:intergenic | 55.0% |
| !! | GTGGTGGTGGATCTTGGAAC+TGG | - | chr3.3:78240350-78240369 | None:intergenic | 55.0% |
| AAACTGAGGCTGGTGGGGAC+TGG | - | chr3.3:78243147-78243166 | None:intergenic | 60.0% | |
| AGGGGCTGGACATTGGCAAC+AGG | + | chr3.3:78243228-78243247 | MS.gene06773:CDS | 60.0% | |
| AGGGGTTTGGGGGGTTATGG+AGG | + | chr3.3:78241090-78241109 | MS.gene06773:intron | 60.0% | |
| CCACCGTCGATCTCAATCGG+AGG | + | chr3.3:78240257-78240276 | MS.gene06773:CDS | 60.0% | |
| CCTCCGATTGAGATCGACGG+TGG | - | chr3.3:78240260-78240279 | None:intergenic | 60.0% | |
| CGAATCGTCAATCTGCGGCG+AGG | + | chr3.3:78240679-78240698 | MS.gene06773:CDS | 60.0% | |
| GAGTTTGGAGGGGAAGGGAG+GGG | - | chr3.3:78241281-78241300 | None:intergenic | 60.0% | |
| GGAATTGCTACGGCGGTGAC+CGG | - | chr3.3:78240457-78240476 | None:intergenic | 60.0% | |
| GGAGTTTGGAGGGGAAGGGA+GGG | - | chr3.3:78241282-78241301 | None:intergenic | 60.0% | |
| GGGGCTGGACATTGGCAACA+GGG | + | chr3.3:78243229-78243248 | MS.gene06773:CDS | 60.0% | |
| GGGGTTTGGGGGGTTATGGA+GGG | + | chr3.3:78241091-78241110 | MS.gene06773:intron | 60.0% | |
| TCTCCTACCGCCGCTAATGC+CGG | + | chr3.3:78240435-78240454 | MS.gene06773:CDS | 60.0% | |
| TGCATTGGGGGAGGGGTTTG+GGG | + | chr3.3:78241079-78241098 | MS.gene06773:intron | 60.0% | |
| ! | TCGTCGTGTTGTTGCGGTGG+TGG | - | chr3.3:78240366-78240385 | None:intergenic | 60.0% |
| ! | TCGTGTTGTTGCGGTGGTGG+TGG | - | chr3.3:78240363-78240382 | None:intergenic | 60.0% |
| !! | CGGAGAAGCGTCGAAGTCGA+AGG | - | chr3.3:78240325-78240344 | None:intergenic | 60.0% |
| !! | GTTGCGGTGGTGGTGGATCT+TGG | - | chr3.3:78240356-78240375 | None:intergenic | 60.0% |
| ACGGCGGTGACCGGCATTAG+CGG | - | chr3.3:78240448-78240467 | None:intergenic | 65.0% | |
| CATTGGGGGAGGGGTTTGGG+GGG | + | chr3.3:78241081-78241100 | MS.gene06773:intron | 65.0% | |
| CTGCGGCGAGGTCGAAAGAG+AGG | + | chr3.3:78240691-78240710 | MS.gene06773:CDS | 65.0% | |
| GAAGGGAGGGGAGGGCTTTG+GGG | - | chr3.3:78241269-78241288 | None:intergenic | 65.0% | |
| GAGTTTGGAGGGGAGGGGAG+GGG | + | chr3.3:78240934-78240953 | MS.gene06773:intron | 65.0% | |
| GCATTGGGGGAGGGGTTTGG+GGG | + | chr3.3:78241080-78241099 | MS.gene06773:intron | 65.0% | |
| GGAAGGGAGGGGAGGGCTTT+GGG | - | chr3.3:78241270-78241289 | None:intergenic | 65.0% | |
| GGAGTTTGGAGGGGAGGGGA+GGG | + | chr3.3:78240933-78240952 | MS.gene06773:intron | 65.0% | |
| GGGAGGGGTTTGGGGGGTTA+TGG | + | chr3.3:78241087-78241106 | MS.gene06773:intron | 65.0% | |
| GGGAGTTTGGAGGGGAAGGG+AGG | - | chr3.3:78241283-78241302 | None:intergenic | 65.0% | |
| TGACCGGCATTAGCGGCGGT+AGG | - | chr3.3:78240441-78240460 | None:intergenic | 65.0% | |
| TTGGAGGGGAAGGGAGGGGA+GGG | - | chr3.3:78241277-78241296 | None:intergenic | 65.0% | |
| TTTGGAGGGGAAGGGAGGGG+AGG | - | chr3.3:78241278-78241297 | None:intergenic | 65.0% | |
| ! | AAGGGAGGGGAGGGCTTTGG+GGG | - | chr3.3:78241268-78241287 | None:intergenic | 65.0% |
| GCGGTGACCGGCATTAGCGG+CGG | - | chr3.3:78240445-78240464 | None:intergenic | 70.0% | |
| GGGAAGGGAGGGGAGGGCTT+TGG | - | chr3.3:78241271-78241290 | None:intergenic | 70.0% | |
| GGGAGTTTGGAGGGGAGGGG+AGG | + | chr3.3:78240932-78240951 | MS.gene06773:intron | 70.0% | |
| TTGGAGGGGAGGGGAGGGGA+GGG | + | chr3.3:78240938-78240957 | MS.gene06773:intron | 70.0% | |
| TTTGGAGGGGAGGGGAGGGG+AGG | + | chr3.3:78240937-78240956 | MS.gene06773:intron | 70.0% | |
| ! | GGGAGGGGAGGGGAGGGTTT+TGG | + | chr3.3:78240944-78240963 | MS.gene06773:intron | 70.0% |
| !! | AGGGAGGGGAGGGCTTTGGG+GGG | - | chr3.3:78241267-78241286 | None:intergenic | 70.0% |
| !! | AGGGGAGGGCTTTGGGGGGT+TGG | - | chr3.3:78241263-78241282 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 78240240 | 78243316 | 78240240 | ID=MS.gene06773 |
| chr3.3 | mRNA | 78240240 | 78243316 | 78240240 | ID=MS.gene06773.t1;Parent=MS.gene06773 |
| chr3.3 | exon | 78240240 | 78240583 | 78240240 | ID=MS.gene06773.t1.exon1;Parent=MS.gene06773.t1 |
| chr3.3 | CDS | 78240240 | 78240583 | 78240240 | ID=cds.MS.gene06773.t1;Parent=MS.gene06773.t1 |
| chr3.3 | exon | 78240671 | 78240803 | 78240671 | ID=MS.gene06773.t1.exon2;Parent=MS.gene06773.t1 |
| chr3.3 | CDS | 78240671 | 78240803 | 78240671 | ID=cds.MS.gene06773.t1;Parent=MS.gene06773.t1 |
| chr3.3 | exon | 78241874 | 78241958 | 78241874 | ID=MS.gene06773.t1.exon3;Parent=MS.gene06773.t1 |
| chr3.3 | CDS | 78241874 | 78241958 | 78241874 | ID=cds.MS.gene06773.t1;Parent=MS.gene06773.t1 |
| chr3.3 | exon | 78242940 | 78243316 | 78242940 | ID=MS.gene06773.t1.exon4;Parent=MS.gene06773.t1 |
| chr3.3 | CDS | 78242940 | 78243316 | 78242940 | ID=cds.MS.gene06773.t1;Parent=MS.gene06773.t1 |
| Gene Sequence |
| Protein sequence |
