Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049400.t1 | XP_013461513.1 | 96.2 | 312 | 11 | 1 | 1 | 312 | 1 | 311 | 1.10E-158 | 569.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049400.t1 | O22873 | 48.8 | 330 | 111 | 10 | 5 | 290 | 32 | 347 | 1.9e-58 | 227.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049400.t1 | A0A072V2G2 | 96.2 | 312 | 11 | 1 | 1 | 312 | 1 | 311 | 7.9e-159 | 569.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene049400.t1 | TF | bZIP |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049400 | MS.gene050133 | 0.82586 | 3.72E-54 | -1.69E-46 |
| MS.gene049400 | MS.gene05556 | -0.806522 | 7.90E-50 | -1.69E-46 |
| MS.gene049400 | MS.gene06529 | 0.979777 | 1.02E-148 | -1.69E-46 |
| MS.gene049400 | MS.gene065350 | 0.866651 | 2.44E-65 | -1.69E-46 |
| MS.gene049400 | MS.gene06773 | 0.960685 | 7.75E-119 | -1.69E-46 |
| MS.gene049400 | MS.gene072659 | 0.80592 | 1.06E-49 | -1.69E-46 |
| MS.gene049400 | MS.gene074163 | -0.813469 | 2.52E-51 | -1.69E-46 |
| MS.gene049400 | MS.gene08872 | 0.82755 | 1.47E-54 | -1.69E-46 |
| MS.gene049400 | MS.gene23184 | 0.833288 | 5.81E-56 | -1.69E-46 |
| MS.gene049400 | MS.gene23185 | 0.823796 | 1.14E-53 | -1.69E-46 |
| MS.gene049400 | MS.gene23404 | 0.828307 | 9.67E-55 | -1.69E-46 |
| MS.gene049400 | MS.gene24742 | -0.808064 | 3.72E-50 | -1.69E-46 |
| MS.gene049400 | MS.gene26487 | -0.816352 | 5.78E-52 | -1.69E-46 |
| MS.gene049400 | MS.gene28853 | 0.80113 | 1.04E-48 | -1.69E-46 |
| MS.gene049400 | MS.gene30475 | -0.804339 | 2.26E-49 | -1.69E-46 |
| MS.gene049400 | MS.gene57412 | 0.818755 | 1.66E-52 | -1.69E-46 |
| MS.gene049400 | MS.gene58088 | 0.825107 | 5.61E-54 | -1.69E-46 |
| MS.gene049400 | MS.gene61544 | -0.811231 | 7.76E-51 | -1.69E-46 |
| MS.gene049400 | MS.gene66208 | -0.818807 | 1.62E-52 | -1.69E-46 |
| MS.gene049400 | MS.gene68339 | -0.80628 | 8.88E-50 | -1.69E-46 |
| MS.gene049400 | MS.gene68526 | -0.813613 | 2.34E-51 | -1.69E-46 |
| MS.gene049400 | MS.gene72054 | -0.815991 | 6.96E-52 | -1.69E-46 |
| MS.gene049400 | MS.gene77342 | 0.812137 | 4.93E-51 | -1.69E-46 |
| MS.gene049400 | MS.gene86339 | -0.819923 | 9.00E-53 | -1.69E-46 |
| MS.gene049400 | MS.gene86351 | 0.817443 | 3.29E-52 | -1.69E-46 |
| MS.gene049400 | MS.gene87631 | -0.836844 | 7.37E-57 | -1.69E-46 |
| MS.gene049400 | MS.gene89062 | 0.81391 | 2.01E-51 | -1.69E-46 |
| MS.gene049400 | MS.gene89074 | -0.823564 | 1.29E-53 | -1.69E-46 |
| MS.gene049400 | MS.gene92106 | -0.804307 | 2.30E-49 | -1.69E-46 |
| MS.gene049400 | MS.gene96111 | -0.80081 | 1.21E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049400.t1 | MTR_3g094020 | 98.397 | 312 | 4 | 1 | 1 | 312 | 1 | 311 | 0.0 | 629 |
| MS.gene049400.t1 | MTR_5g075390 | 52.366 | 317 | 131 | 8 | 7 | 312 | 51 | 358 | 4.53e-94 | 283 |
| MS.gene049400.t1 | MTR_3g467120 | 46.705 | 349 | 134 | 11 | 7 | 312 | 38 | 377 | 2.82e-87 | 266 |
| MS.gene049400.t1 | MTR_2g099050 | 43.056 | 288 | 89 | 10 | 7 | 231 | 72 | 347 | 1.15e-50 | 173 |
| MS.gene049400.t1 | MTR_6g034945 | 48.624 | 218 | 87 | 6 | 7 | 201 | 28 | 243 | 8.20e-48 | 162 |
| MS.gene049400.t1 | MTR_4g072090 | 69.492 | 118 | 36 | 0 | 90 | 207 | 341 | 458 | 2.21e-46 | 164 |
| MS.gene049400.t1 | MTR_4g072090 | 66.981 | 106 | 35 | 0 | 90 | 195 | 341 | 446 | 2.54e-38 | 141 |
| MS.gene049400.t1 | MTR_1g023690 | 51.923 | 156 | 73 | 1 | 92 | 247 | 370 | 523 | 1.55e-29 | 118 |
| MS.gene049400.t1 | MTR_2g090900 | 46.809 | 94 | 50 | 0 | 108 | 201 | 190 | 283 | 6.09e-18 | 83.2 |
| MS.gene049400.t1 | MTR_2g090900 | 46.809 | 94 | 50 | 0 | 108 | 201 | 190 | 283 | 1.09e-17 | 82.8 |
| MS.gene049400.t1 | MTR_4g079500 | 44.681 | 94 | 52 | 0 | 108 | 201 | 193 | 286 | 4.18e-17 | 80.9 |
| MS.gene049400.t1 | MTR_1g099030 | 31.053 | 190 | 119 | 2 | 24 | 213 | 51 | 228 | 5.59e-17 | 79.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049400.t1 | AT2G40620 | 51.057 | 331 | 98 | 11 | 5 | 288 | 32 | 345 | 8.79e-84 | 257 |
| MS.gene049400.t1 | AT1G06850 | 51.082 | 231 | 86 | 4 | 78 | 301 | 116 | 326 | 1.47e-68 | 217 |
| MS.gene049400.t1 | AT2G31370 | 46.275 | 255 | 86 | 7 | 7 | 215 | 58 | 307 | 1.04e-53 | 180 |
| MS.gene049400.t1 | AT2G31370 | 46.275 | 255 | 86 | 7 | 7 | 215 | 58 | 307 | 1.26e-53 | 180 |
| MS.gene049400.t1 | AT2G31370 | 46.275 | 255 | 86 | 7 | 7 | 215 | 58 | 307 | 1.26e-53 | 180 |
| MS.gene049400.t1 | AT2G31370 | 46.275 | 255 | 86 | 7 | 7 | 215 | 58 | 307 | 1.26e-53 | 180 |
| MS.gene049400.t1 | AT2G31370 | 46.275 | 255 | 86 | 7 | 7 | 215 | 58 | 307 | 1.26e-53 | 180 |
| MS.gene049400.t1 | AT2G31370 | 46.275 | 255 | 86 | 7 | 7 | 215 | 58 | 307 | 1.26e-53 | 180 |
| MS.gene049400.t1 | AT2G31370 | 46.275 | 255 | 86 | 7 | 7 | 215 | 58 | 307 | 1.26e-53 | 180 |
| MS.gene049400.t1 | AT1G06070 | 45.200 | 250 | 94 | 6 | 7 | 217 | 73 | 318 | 1.24e-51 | 176 |
| MS.gene049400.t1 | AT4G38900 | 72.174 | 115 | 32 | 0 | 92 | 206 | 377 | 491 | 2.07e-46 | 164 |
| MS.gene049400.t1 | AT4G38900 | 72.174 | 115 | 32 | 0 | 92 | 206 | 377 | 491 | 2.07e-46 | 164 |
| MS.gene049400.t1 | AT1G43700 | 54.070 | 172 | 63 | 4 | 70 | 227 | 142 | 311 | 2.40e-46 | 160 |
| MS.gene049400.t1 | AT4G38900 | 68.595 | 121 | 32 | 1 | 92 | 206 | 377 | 497 | 5.84e-44 | 158 |
| MS.gene049400.t1 | AT2G21230 | 57.447 | 141 | 59 | 1 | 66 | 206 | 328 | 467 | 3.86e-41 | 150 |
| MS.gene049400.t1 | AT2G21230 | 57.447 | 141 | 59 | 1 | 66 | 206 | 328 | 467 | 3.86e-41 | 150 |
| MS.gene049400.t1 | AT2G21230 | 54.422 | 147 | 60 | 2 | 66 | 206 | 328 | 473 | 3.47e-38 | 142 |
| MS.gene049400.t1 | AT2G21230 | 55.645 | 124 | 54 | 1 | 66 | 189 | 328 | 450 | 5.83e-34 | 129 |
| MS.gene049400.t1 | AT1G06850 | 64.835 | 91 | 31 | 1 | 78 | 167 | 116 | 206 | 1.56e-31 | 118 |
| MS.gene049400.t1 | AT2G12900 | 41.667 | 96 | 56 | 0 | 109 | 204 | 116 | 211 | 4.24e-19 | 85.5 |
| MS.gene049400.t1 | AT3G58120 | 46.237 | 93 | 50 | 0 | 109 | 201 | 202 | 294 | 1.40e-18 | 85.1 |
| MS.gene049400.t1 | AT2G42380 | 41.026 | 117 | 62 | 1 | 108 | 217 | 185 | 301 | 1.82e-18 | 84.7 |
| MS.gene049400.t1 | AT2G12940 | 37.500 | 112 | 69 | 1 | 92 | 203 | 132 | 242 | 7.15e-17 | 79.7 |
| MS.gene049400.t1 | AT2G13150 | 40.594 | 101 | 59 | 1 | 101 | 201 | 142 | 241 | 7.22e-17 | 79.3 |
| MS.gene049400.t1 | AT2G42380 | 42.857 | 84 | 48 | 0 | 107 | 190 | 184 | 267 | 1.74e-14 | 72.8 |
| MS.gene049400.t1 | AT3G58120 | 43.750 | 80 | 45 | 0 | 109 | 188 | 202 | 281 | 1.10e-13 | 70.5 |
| MS.gene049400.t1 | AT2G21235 | 38.776 | 98 | 59 | 1 | 109 | 206 | 359 | 455 | 3.30e-13 | 70.5 |
| MS.gene049400.t1 | AT2G42380 | 37.607 | 117 | 55 | 2 | 108 | 217 | 185 | 290 | 3.54e-12 | 66.2 |
Find 97 sgRNAs with CRISPR-Local
Find 203 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGATTCTATCGGCCAATTTC+AGG | 0.184834 | 3.1:+75184256 | MS.gene049400:CDS |
| AACATGGTCCAAACGATCTT+AGG | 0.241223 | 3.1:+75184126 | MS.gene049400:CDS |
| TTTGATTTGATTCAGGATTC+TGG | 0.271099 | 3.1:+75182095 | MS.gene049400:intron |
| CAATGTCCAGCCCCTGAAAT+TGG | 0.281734 | 3.1:-75184268 | None:intergenic |
| CACAATTGAGCAAGTTTATC+AGG | 0.289271 | 3.1:-75181973 | None:intergenic |
| TTTCATTCCCTCTCATCTAA+TGG | 0.291764 | 3.1:+75184167 | MS.gene049400:CDS |
| GTTGCGGTGGTGGTGGATCT+TGG | 0.360501 | 3.1:-75181792 | None:intergenic |
| AGGGGCTGGACATTGGCAAC+AGG | 0.370603 | 3.1:+75184276 | MS.gene049400:CDS |
| TGCATGGCCCTAAGATCGTT+TGG | 0.389186 | 3.1:-75184134 | None:intergenic |
| CCATGCTGATACCTATGGTT+TGG | 0.391118 | 3.1:+75184052 | MS.gene049400:CDS |
| AAAGACCTCTTGGCGCGTTT+AGG | 0.396524 | 3.1:-75182006 | None:intergenic |
| GGTCGAAATCGTCGGGGATT+CGG | 0.403638 | 3.1:-75181726 | None:intergenic |
| GAGTTTGGATCCGGAATTAT+CGG | 0.405371 | 3.1:-75181848 | None:intergenic |
| TTTGCATCAAAAGGCGTTGT+TGG | 0.405645 | 3.1:-75184348 | None:intergenic |
| CGACGATTTCGACCTCGAAA+TGG | 0.407698 | 3.1:+75181735 | MS.gene049400:CDS |
| TACATCGATTCCGATAATTC+CGG | 0.408499 | 3.1:+75181838 | MS.gene049400:CDS |
| CATGCTGATACCTATGGTTT+GGG | 0.409516 | 3.1:+75184053 | MS.gene049400:CDS |
| TTAGTAAAATTTGCATCAAA+AGG | 0.417524 | 3.1:-75184357 | None:intergenic |
| AAACTGAGGCTGGTGGGGAC+TGG | 0.421487 | 3.1:-75184192 | None:intergenic |
| GATTCTATCGGCCAATTTCA+GGG | 0.428325 | 3.1:+75184257 | MS.gene049400:CDS |
| GTGGTGGTGGATCTTGGAAC+TGG | 0.429585 | 3.1:-75181786 | None:intergenic |
| ACCCACTTCATATGATTTGT+CGG | 0.433055 | 3.1:+75184220 | MS.gene049400:CDS |
| TATCGGCCAATTTCAGGGGC+TGG | 0.448809 | 3.1:+75184262 | MS.gene049400:CDS |
| GATAGGCTCAAGCTTGCTAC+TGG | 0.454169 | 3.1:+75184017 | MS.gene049400:CDS |
| ATTGAGATCGACGGTGGAAC+GGG | 0.455173 | 3.1:-75181690 | None:intergenic |
| CATTGAAGAACGAAGTTGAT+AGG | 0.457070 | 3.1:+75184000 | MS.gene049400:CDS |
| ATTTCGAGGTCGAAATCGTC+GGG | 0.457489 | 3.1:-75181733 | None:intergenic |
| TCTCATGTTCTGATGCCTGA+TGG | 0.464397 | 3.1:+75184302 | MS.gene049400:CDS |
| GGCGGTAGGAGAATTGAGTT+TGG | 0.473174 | 3.1:-75181863 | None:intergenic |
| TAGCTTAGCTTGTTGCTCCA+TGG | 0.487772 | 3.1:-75182977 | None:intergenic |
| CTGATAAACTTGCTCAATTG+TGG | 0.489201 | 3.1:+75181974 | MS.gene049400:CDS |
| CGTTTGGACCATGTTGTGGC+TGG | 0.489619 | 3.1:-75184118 | None:intergenic |
| ACAGAAACGGAGGGACCATC+AGG | 0.491647 | 3.1:-75184317 | None:intergenic |
| AGGAGAATTGAGTTTGGATC+CGG | 0.498325 | 3.1:-75181857 | None:intergenic |
| GGAATTGCTACGGCGGTGAC+CGG | 0.499947 | 3.1:-75181893 | None:intergenic |
| TCTTCTTCCTTGTTGTCTGA+AGG | 0.501718 | 3.1:+75181925 | MS.gene049400:CDS |
| CCAACCCATGCTGATACCTA+TGG | 0.503575 | 3.1:+75184047 | MS.gene049400:CDS |
| CAATTTCAGGGGCTGGACAT+TGG | 0.506474 | 3.1:+75184269 | MS.gene049400:CDS |
| AGATCAAACTGAGGCTGGTG+GGG | 0.510809 | 3.1:-75184197 | None:intergenic |
| GTTCCACCGTCGATCTCAAT+CGG | 0.512206 | 3.1:+75181693 | MS.gene049400:CDS |
| ATTATCGGAATCGATGTAAG+AGG | 0.514373 | 3.1:-75181833 | None:intergenic |
| ACATGGTCCAAACGATCTTA+GGG | 0.515048 | 3.1:+75184127 | MS.gene049400:CDS |
| TAGATCAAACTGAGGCTGGT+GGG | 0.518122 | 3.1:-75184198 | None:intergenic |
| TCGTCGTGTTGTTGCGGTGG+TGG | 0.518420 | 3.1:-75181802 | None:intergenic |
| TCGTGTTGTTGCGGTGGTGG+TGG | 0.524797 | 3.1:-75181799 | None:intergenic |
| TCTCCTACCGCCGCTAATGC+CGG | 0.526393 | 3.1:+75181874 | MS.gene049400:CDS |
| CATTTCGAGGTCGAAATCGT+CGG | 0.531230 | 3.1:-75181734 | None:intergenic |
| TGGGTAGATCAAACTGAGGC+TGG | 0.537417 | 3.1:-75184202 | None:intergenic |
| ACGGCGGTGACCGGCATTAG+CGG | 0.537421 | 3.1:-75181884 | None:intergenic |
| AAAATACCGAGTTGAAGCTT+CGG | 0.538764 | 3.1:+75182947 | MS.gene049400:CDS |
| GTTATGTGGTTGAGCTTGAA+AGG | 0.547036 | 3.1:+75182160 | MS.gene049400:CDS |
| CGGAGAAGCGTCGAAGTCGA+AGG | 0.552256 | 3.1:-75181761 | None:intergenic |
| ATGAAAATGTTGCATTTGCA+TGG | 0.556228 | 3.1:-75184150 | None:intergenic |
| TTCCGACAAATCATATGAAG+TGG | 0.557296 | 3.1:-75184222 | None:intergenic |
| GGGGCTGGACATTGGCAACA+GGG | 0.559117 | 3.1:+75184277 | MS.gene049400:CDS |
| CTGCGGCGAGGTCGAAAGAG+AGG | 0.561569 | 3.1:+75182130 | MS.gene049400:CDS |
| GATTGAGATCGACGGTGGAA+CGG | 0.569204 | 3.1:-75181691 | None:intergenic |
| CGGAATCGATGTAAGAGGAA+AGG | 0.570255 | 3.1:-75181828 | None:intergenic |
| AGGAGATCGTCGTGTTGTTG+CGG | 0.570948 | 3.1:-75181808 | None:intergenic |
| ATGTATCGGCGGAATTGCTA+CGG | 0.574251 | 3.1:-75181903 | None:intergenic |
| AGAGAGGAAAGCTTGTTATG+TGG | 0.577168 | 3.1:+75182146 | MS.gene049400:CDS |
| AGATCGTTTGGACCATGTTG+TGG | 0.578580 | 3.1:-75184122 | None:intergenic |
| GACTGGATCCATTAGATGAG+AGG | 0.584227 | 3.1:-75184175 | None:intergenic |
| AGTCGAAGGGATCCATTTCG+AGG | 0.586525 | 3.1:-75181747 | None:intergenic |
| TTGATGCATTCCCAAACCAT+AGG | 0.589815 | 3.1:-75184063 | None:intergenic |
| CAACAAGGAAGAAGATGTAT+CGG | 0.593104 | 3.1:-75181917 | None:intergenic |
| ACTGGATCCATTAGATGAGA+GGG | 0.595904 | 3.1:-75184174 | None:intergenic |
| GTAGATCAAACTGAGGCTGG+TGG | 0.597370 | 3.1:-75184199 | None:intergenic |
| ATTCTATCGGCCAATTTCAG+GGG | 0.601347 | 3.1:+75184258 | MS.gene049400:CDS |
| GAAGCTTCGGTTACAAACCA+TGG | 0.603767 | 3.1:+75182960 | MS.gene049400:CDS |
| CAACAAGCTAAGCTATGTGA+TGG | 0.613164 | 3.1:+75182985 | MS.gene049400:CDS |
| TTCGATTCCTTCAGACAACA+AGG | 0.616363 | 3.1:-75181932 | None:intergenic |
| GGAGAAGCGTCGAAGTCGAA+GGG | 0.620947 | 3.1:-75181760 | None:intergenic |
| TTGTAACCGAAGCTTCAACT+CGG | 0.625038 | 3.1:-75182953 | None:intergenic |
| TCCGACAAATCATATGAAGT+GGG | 0.627186 | 3.1:-75184221 | None:intergenic |
| AGATCGTCGTGTTGTTGCGG+TGG | 0.629335 | 3.1:-75181805 | None:intergenic |
| CTTGGCGCGTTTAGGATCAA+CGG | 0.630373 | 3.1:-75181998 | None:intergenic |
| ATGTTGTGGCTGGTGCATGA+AGG | 0.637404 | 3.1:-75184108 | None:intergenic |
| TTCATGCACCAGCCACAACA+TGG | 0.640783 | 3.1:+75184110 | MS.gene049400:CDS |
| CCAAACCATAGGTATCAGCA+TGG | 0.641882 | 3.1:-75184052 | None:intergenic |
| GGTGGATCTTGGAACTGGAG+CGG | 0.658797 | 3.1:-75181781 | None:intergenic |
| CCATAGGTATCAGCATGGGT+TGG | 0.661247 | 3.1:-75184047 | None:intergenic |
| CAAACCATAGGTATCAGCAT+GGG | 0.662566 | 3.1:-75184051 | None:intergenic |
| TTGATCCTAAACGCGCCAAG+AGG | 0.666281 | 3.1:+75182001 | MS.gene049400:CDS |
| GCTCAAGCTTGCTACTGGAG+AGG | 0.667501 | 3.1:+75184022 | MS.gene049400:CDS |
| CGAATCGTCAATCTGCGGCG+AGG | 0.667585 | 3.1:+75182118 | MS.gene049400:CDS |
| CCTCCGATTGAGATCGACGG+TGG | 0.668695 | 3.1:-75181696 | None:intergenic |
| CAAGGAAGAAGATGTATCGG+CGG | 0.669677 | 3.1:-75181914 | None:intergenic |
| TGACCGGCATTAGCGGCGGT+AGG | 0.676875 | 3.1:-75181877 | None:intergenic |
| ATGTTGTCAAGTGATTCTAT+CGG | 0.677885 | 3.1:+75184245 | MS.gene049400:CDS |
| TATCGGCGGAATTGCTACGG+CGG | 0.692611 | 3.1:-75181900 | None:intergenic |
| CCACCGTCGATCTCAATCGG+AGG | 0.695045 | 3.1:+75181696 | MS.gene049400:CDS |
| GCGGTGACCGGCATTAGCGG+CGG | 0.701383 | 3.1:-75181881 | None:intergenic |
| GTACCTCCGATTGAGATCGA+CGG | 0.703198 | 3.1:-75181699 | None:intergenic |
| TTTCGAGGTCGAAATCGTCG+GGG | 0.718515 | 3.1:-75181732 | None:intergenic |
| TCTGGCGAATCGTCAATCTG+CGG | 0.734478 | 3.1:+75182113 | MS.gene049400:CDS |
| GAAGTGGGTAGATCAAACTG+AGG | 0.754115 | 3.1:-75184206 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAAAAATAACCAA+AGG | - | chr3.1:75182724-75182743 | None:intergenic | 10.0% |
| !!! | ATTTTTTTTTTTTTTTCCAT+TGG | + | chr3.1:75182730-75182749 | MS.gene049400:intron | 10.0% |
| !!! | TTTTTTTTTTTTTTTCCATT+GGG | + | chr3.1:75182731-75182750 | MS.gene049400:intron | 10.0% |
| !! | ATTTGTTTATATTATGTTAG+AGG | + | chr3.1:75183249-75183268 | MS.gene049400:intron | 15.0% |
| !!! | TAATATTTTTGATTCAACTT+AGG | - | chr3.1:75182263-75182282 | None:intergenic | 15.0% |
| !! | AAAAAAAATAACCAAAGGAT+AGG | - | chr3.1:75182719-75182738 | None:intergenic | 20.0% |
| !! | AAAAAAATAACCAAAGGATA+GGG | - | chr3.1:75182718-75182737 | None:intergenic | 20.0% |
| !! | ATAGACAAAACATTAATGTT+TGG | - | chr3.1:75183337-75183356 | None:intergenic | 20.0% |
| !! | ATATAAGGAATTTAACAAAC+TGG | - | chr3.1:75182838-75182857 | None:intergenic | 20.0% |
| !! | TATAAGTTATCTTGTAGTAT+CGG | + | chr3.1:75183273-75183292 | MS.gene049400:intron | 20.0% |
| !!! | ACATGATTATATATTTGTTG+TGG | + | chr3.1:75182331-75182350 | MS.gene049400:intron | 20.0% |
| ! | AAAAAATTACATGTCATACG+AGG | - | chr3.1:75183498-75183517 | None:intergenic | 25.0% |
| ! | ACAAAACATTAATGTTTGGA+CGG | - | chr3.1:75183333-75183352 | None:intergenic | 25.0% |
| ! | AGTTCAATTAAAGGAAACAA+AGG | - | chr3.1:75182809-75182828 | None:intergenic | 25.0% |
| ! | ATTTATCACTACTTCAACTA+AGG | + | chr3.1:75183771-75183790 | MS.gene049400:intron | 25.0% |
| ! | CATATTCTAACAGAAACTAT+AGG | - | chr3.1:75183215-75183234 | None:intergenic | 25.0% |
| ! | TACAGCATTTATCCTTTAAA+TGG | - | chr3.1:75183428-75183447 | None:intergenic | 25.0% |
| ! | TAGCTTACATTCTTAGTAAT+TGG | + | chr3.1:75183573-75183592 | MS.gene049400:intron | 25.0% |
| ! | TCAGTGTTAAACTAAGTTAA+TGG | - | chr3.1:75183111-75183130 | None:intergenic | 25.0% |
| ! | TGTTAAATTCCTTATATCAG+TGG | + | chr3.1:75182841-75182860 | MS.gene049400:intron | 25.0% |
| ! | TTACATTCTTAGTAATTGGA+TGG | + | chr3.1:75183577-75183596 | MS.gene049400:intron | 25.0% |
| ! | TTCCATCAGTATAATATGAA+AGG | + | chr3.1:75183085-75183104 | MS.gene049400:intron | 25.0% |
| ! | TTGTTTCCTTTAATTGAACT+TGG | + | chr3.1:75182809-75182828 | MS.gene049400:intron | 25.0% |
| !! | TCATTGAATTGAAAAGTATG+AGG | - | chr3.1:75183307-75183326 | None:intergenic | 25.0% |
| !!! | AAAACAGAAACACTACTTTT+AGG | - | chr3.1:75183878-75183897 | None:intergenic | 25.0% |
| !!! | ATTTGTTGTGAAGCTTAAAT+GGG | + | chr3.1:75182343-75182362 | MS.gene049400:intron | 25.0% |
| !!! | GTTGGTTTTATTAACAGAAA+CGG | - | chr3.1:75184333-75184352 | None:intergenic | 25.0% |
| !!! | TATTTGTTGTGAAGCTTAAA+TGG | + | chr3.1:75182342-75182361 | MS.gene049400:intron | 25.0% |
| AAATTCCTTATATCAGTGGT+GGG | + | chr3.1:75182845-75182864 | MS.gene049400:intron | 30.0% | |
| AGTCTCTTAAGTTTGATAGA+TGG | + | chr3.1:75183177-75183196 | MS.gene049400:intron | 30.0% | |
| ATGAAAATGTTGCATTTGCA+TGG | - | chr3.1:75184153-75184172 | None:intergenic | 30.0% | |
| ATGTACAACGATTTGAAAAC+TGG | - | chr3.1:75183846-75183865 | None:intergenic | 30.0% | |
| ATGTTGTCAAGTGATTCTAT+CGG | + | chr3.1:75184245-75184264 | MS.gene049400:CDS | 30.0% | |
| CAATTACAAACTAAATGAGC+TGG | + | chr3.1:75183450-75183469 | MS.gene049400:intron | 30.0% | |
| CACTGAATTAATGTAAGCAT+CGG | + | chr3.1:75183125-75183144 | MS.gene049400:intron | 30.0% | |
| CATATGAAGATTCTGTTCAA+GGG | + | chr3.1:75182588-75182607 | MS.gene049400:intron | 30.0% | |
| GAAGTAGTGATAAATGAACA+TGG | - | chr3.1:75183766-75183785 | None:intergenic | 30.0% | |
| GGCCTTCAAAAAAAAAAAGA+GGG | + | chr3.1:75182664-75182683 | MS.gene049400:intron | 30.0% | |
| GTCTCTTAAGTTTGATAGAT+GGG | + | chr3.1:75183178-75183197 | MS.gene049400:intron | 30.0% | |
| TAAAGTGTAGCATATTTGCA+TGG | - | chr3.1:75183021-75183040 | None:intergenic | 30.0% | |
| TAAATTCCTTATATCAGTGG+TGG | + | chr3.1:75182844-75182863 | MS.gene049400:intron | 30.0% | |
| TATTAATATTTGAGCCTACG+TGG | + | chr3.1:75183358-75183377 | MS.gene049400:intron | 30.0% | |
| TCATATGAAGATTCTGTTCA+AGG | + | chr3.1:75182587-75182606 | MS.gene049400:intron | 30.0% | |
| TGGAAACCAAGTTCAATTAA+AGG | - | chr3.1:75182818-75182837 | None:intergenic | 30.0% | |
| TTAATAAGATGTCAACCGAA+AGG | - | chr3.1:75183700-75183719 | None:intergenic | 30.0% | |
| TTGGATGGTATATTAACACT+TGG | + | chr3.1:75183592-75183611 | MS.gene049400:intron | 30.0% | |
| ! | TGCTCAATTAAATCTTTTCC+AGG | + | chr3.1:75182221-75182240 | MS.gene049400:CDS | 30.0% |
| ! | TTCATTCATTTGGAAAGTGT+GGG | + | chr3.1:75183622-75183641 | MS.gene049400:intron | 30.0% |
| !! | CAGCTCATTTAGTTTGTAAT+TGG | - | chr3.1:75183452-75183471 | None:intergenic | 30.0% |
| !! | GTTTTATTAACAGAAACGGA+GGG | - | chr3.1:75184329-75184348 | None:intergenic | 30.0% |
| !! | TGGCAGTTCATTTTTCAAAA+TGG | + | chr3.1:75182778-75182797 | MS.gene049400:intron | 30.0% |
| !! | TTTGATTTGATTCAGGATTC+TGG | + | chr3.1:75182095-75182114 | MS.gene049400:intron | 30.0% |
| !!! | CTCCCTCTTTTTTTTTTTGA+AGG | - | chr3.1:75182669-75182688 | None:intergenic | 30.0% |
| !!! | GAACTTGTTTTTATAGATCG+TGG | + | chr3.1:75182071-75182090 | MS.gene049400:intron | 30.0% |
| !!! | TTTTTTTTCCATTGGGCTAT+TGG | + | chr3.1:75182738-75182757 | MS.gene049400:intron | 30.0% |
| ACTAGTCATTGAAGTAGTGA+AGG | - | chr3.1:75183823-75183842 | None:intergenic | 35.0% | |
| ATTATCGGAATCGATGTAAG+AGG | - | chr3.1:75181836-75181855 | None:intergenic | 35.0% | |
| CAACAAGGAAGAAGATGTAT+CGG | - | chr3.1:75181920-75181939 | None:intergenic | 35.0% | |
| CACAATTGAGCAAGTTTATC+AGG | - | chr3.1:75181976-75181995 | None:intergenic | 35.0% | |
| CAGCAAAACAAGAAAGAACA+AGG | - | chr3.1:75183047-75183066 | None:intergenic | 35.0% | |
| CTTCATTCATTTGGAAAGTG+TGG | + | chr3.1:75183621-75183640 | MS.gene049400:intron | 35.0% | |
| GCATTAAAAGAAAGACCTCT+TGG | - | chr3.1:75182019-75182038 | None:intergenic | 35.0% | |
| GGCCTTTCATATTATACTGA+TGG | - | chr3.1:75183090-75183109 | None:intergenic | 35.0% | |
| GGGCCTTCAAAAAAAAAAAG+AGG | + | chr3.1:75182663-75182682 | MS.gene049400:intron | 35.0% | |
| TCCGACAAATCATATGAAGT+GGG | - | chr3.1:75184224-75184243 | None:intergenic | 35.0% | |
| TGACATGGTAGTCCATTTAA+AGG | + | chr3.1:75183413-75183432 | MS.gene049400:intron | 35.0% | |
| TGGTCTAGACTTCATTCATT+TGG | + | chr3.1:75183612-75183631 | MS.gene049400:intron | 35.0% | |
| TTCCGACAAATCATATGAAG+TGG | - | chr3.1:75184225-75184244 | None:intergenic | 35.0% | |
| TTTCATTCCCTCTCATCTAA+TGG | + | chr3.1:75184167-75184186 | MS.gene049400:CDS | 35.0% | |
| ! | AAAATACCGAGTTGAAGCTT+CGG | + | chr3.1:75182947-75182966 | MS.gene049400:CDS | 35.0% |
| ! | ACCCACTTCATATGATTTGT+CGG | + | chr3.1:75184220-75184239 | MS.gene049400:CDS | 35.0% |
| ! | CATTGAAGAACGAAGTTGAT+AGG | + | chr3.1:75184000-75184019 | MS.gene049400:CDS | 35.0% |
| ! | CTGATAAACTTGCTCAATTG+TGG | + | chr3.1:75181974-75181993 | MS.gene049400:CDS | 35.0% |
| ! | TTTGTTGTGGCCATTAATGA+GGG | + | chr3.1:75182550-75182569 | MS.gene049400:intron | 35.0% |
| !! | ATTTGTTGTGGCCATTAATG+AGG | + | chr3.1:75182549-75182568 | MS.gene049400:intron | 35.0% |
| !! | TACATCGATTCCGATAATTC+CGG | + | chr3.1:75181838-75181857 | MS.gene049400:CDS | 35.0% |
| !! | TCGTGGATTTGATTTGATTC+AGG | + | chr3.1:75182088-75182107 | MS.gene049400:intron | 35.0% |
| !!! | CTTGTTCTTTCTTGTTTTGC+TGG | + | chr3.1:75183045-75183064 | MS.gene049400:intron | 35.0% |
| !!! | CTTTTTCAGAGAGATACAAC+TGG | + | chr3.1:75182913-75182932 | MS.gene049400:intron | 35.0% |
| !!! | GGTTTTATTAACAGAAACGG+AGG | - | chr3.1:75184330-75184349 | None:intergenic | 35.0% |
| !!! | GGTTTTGATTCATGGTTCAT+TGG | - | chr3.1:75183802-75183821 | None:intergenic | 35.0% |
| !!! | GTAGTGAAGGTTTTGATTCA+TGG | - | chr3.1:75183810-75183829 | None:intergenic | 35.0% |
| AAAGCAAACCAATAGCCCAA+TGG | - | chr3.1:75182749-75182768 | None:intergenic | 40.0% | |
| AAAGGATAGGGTAACTGTTC+TGG | - | chr3.1:75182706-75182725 | None:intergenic | 40.0% | |
| AACATGGTCCAAACGATCTT+AGG | + | chr3.1:75184126-75184145 | MS.gene049400:CDS | 40.0% | |
| ACATGGTCCAAACGATCTTA+GGG | + | chr3.1:75184127-75184146 | MS.gene049400:CDS | 40.0% | |
| ACTGGATCCATTAGATGAGA+GGG | - | chr3.1:75184177-75184196 | None:intergenic | 40.0% | |
| AGAACAGTTACCCTATCCTT+TGG | + | chr3.1:75182705-75182724 | MS.gene049400:intron | 40.0% | |
| AGGAGAATTGAGTTTGGATC+CGG | - | chr3.1:75181860-75181879 | None:intergenic | 40.0% | |
| AGTGATAAATCCGATCAGAG+AGG | + | chr3.1:75182392-75182411 | MS.gene049400:intron | 40.0% | |
| ATAAATCCGATCAGAGAGGT+AGG | + | chr3.1:75182396-75182415 | MS.gene049400:intron | 40.0% | |
| ATTCTATCGGCCAATTTCAG+GGG | + | chr3.1:75184258-75184277 | MS.gene049400:CDS | 40.0% | |
| CAAACCATAGGTATCAGCAT+GGG | - | chr3.1:75184054-75184073 | None:intergenic | 40.0% | |
| CAACAAGCTAAGCTATGTGA+TGG | + | chr3.1:75182985-75183004 | MS.gene049400:CDS | 40.0% | |
| CATGCTGATACCTATGGTTT+GGG | + | chr3.1:75184053-75184072 | MS.gene049400:CDS | 40.0% | |
| CTACAGTGATTGAAGCCTTT+CGG | + | chr3.1:75183682-75183701 | MS.gene049400:intron | 40.0% | |
| GAGTTTGGATCCGGAATTAT+CGG | - | chr3.1:75181851-75181870 | None:intergenic | 40.0% | |
| GATTCTATCGGCCAATTTCA+GGG | + | chr3.1:75184257-75184276 | MS.gene049400:CDS | 40.0% | |
| GGCAATGATGAGTAATAACC+TGG | - | chr3.1:75182242-75182261 | None:intergenic | 40.0% | |
| GTTATGTGGTTGAGCTTGAA+AGG | + | chr3.1:75182160-75182179 | MS.gene049400:CDS | 40.0% | |
| TCACAAACCATAATCCACGT+AGG | - | chr3.1:75183375-75183394 | None:intergenic | 40.0% | |
| TGATTCTATCGGCCAATTTC+AGG | + | chr3.1:75184256-75184275 | MS.gene049400:CDS | 40.0% | |
| TTCGATTCCTTCAGACAACA+AGG | - | chr3.1:75181935-75181954 | None:intergenic | 40.0% | |
| TTGATGCATTCCCAAACCAT+AGG | - | chr3.1:75184066-75184085 | None:intergenic | 40.0% | |
| TTGTAACCGAAGCTTCAACT+CGG | - | chr3.1:75182956-75182975 | None:intergenic | 40.0% | |
| TTTCAACCTACCTCTCTGAT+CGG | - | chr3.1:75182405-75182424 | None:intergenic | 40.0% | |
| ! | ATAGGGTAACTGTTCTGGAT+TGG | - | chr3.1:75182701-75182720 | None:intergenic | 40.0% |
| ! | ATCAGAGAGGTAGGTTGAAA+TGG | + | chr3.1:75182405-75182424 | MS.gene049400:intron | 40.0% |
| ! | ATTTGAGCCTACGTGGATTA+TGG | + | chr3.1:75183365-75183384 | MS.gene049400:intron | 40.0% |
| ! | TCTTCTTCCTTGTTGTCTGA+AGG | + | chr3.1:75181925-75181944 | MS.gene049400:CDS | 40.0% |
| !! | AGAGAGGAAAGCTTGTTATG+TGG | + | chr3.1:75182146-75182165 | MS.gene049400:CDS | 40.0% |
| !!! | TGGTTTGCTTTTCACTCTTG+TGG | + | chr3.1:75182758-75182777 | MS.gene049400:intron | 40.0% |
| AACGTCCCAACCCTCATTAA+TGG | - | chr3.1:75182563-75182582 | None:intergenic | 45.0% | |
| ACCATATTCACAGGTGGAGT+GGG | + | chr3.1:75182643-75182662 | MS.gene049400:intron | 45.0% | |
| AGATCGTTTGGACCATGTTG+TGG | - | chr3.1:75184125-75184144 | None:intergenic | 45.0% | |
| AGCACTCTGACGCTTAAGTT+AGG | + | chr3.1:75182470-75182489 | MS.gene049400:intron | 45.0% | |
| AGTTAGGGAGAGAGCAAGTA+AGG | + | chr3.1:75182486-75182505 | MS.gene049400:intron | 45.0% | |
| ATTTCGAGGTCGAAATCGTC+GGG | - | chr3.1:75181736-75181755 | None:intergenic | 45.0% | |
| CAAGGAAGAAGATGTATCGG+CGG | - | chr3.1:75181917-75181936 | None:intergenic | 45.0% | |
| CATTTCGAGGTCGAAATCGT+CGG | - | chr3.1:75181737-75181756 | None:intergenic | 45.0% | |
| CCAAACCATAGGTATCAGCA+TGG | - | chr3.1:75184055-75184074 | None:intergenic | 45.0% | |
| CCATGCTGATACCTATGGTT+TGG | + | chr3.1:75184052-75184071 | MS.gene049400:CDS | 45.0% | |
| CGGAATCGATGTAAGAGGAA+AGG | - | chr3.1:75181831-75181850 | None:intergenic | 45.0% | |
| CGTCTGTAGCGATGAGATTA+GGG | + | chr3.1:75182435-75182454 | MS.gene049400:intron | 45.0% | |
| GAAAGCCCACCACTGATATA+AGG | - | chr3.1:75182853-75182872 | None:intergenic | 45.0% | |
| GAAGCTTCGGTTACAAACCA+TGG | + | chr3.1:75182960-75182979 | MS.gene049400:CDS | 45.0% | |
| GAAGTGGGTAGATCAAACTG+AGG | - | chr3.1:75184209-75184228 | None:intergenic | 45.0% | |
| GACTGGATCCATTAGATGAG+AGG | - | chr3.1:75184178-75184197 | None:intergenic | 45.0% | |
| GCACTCTGACGCTTAAGTTA+GGG | + | chr3.1:75182471-75182490 | MS.gene049400:intron | 45.0% | |
| GTCAACTGTCTCAGATGACA+TGG | + | chr3.1:75183398-75183417 | MS.gene049400:intron | 45.0% | |
| GTCTGTAGCGATGAGATTAG+GGG | + | chr3.1:75182436-75182455 | MS.gene049400:intron | 45.0% | |
| GTTAGGGAGAGAGCAAGTAA+GGG | + | chr3.1:75182487-75182506 | MS.gene049400:intron | 45.0% | |
| GTTCAAGGGAATCTGTGTGT+GGG | + | chr3.1:75182602-75182621 | MS.gene049400:intron | 45.0% | |
| TAATGAGGGTTGGGACGTTA+TGG | + | chr3.1:75182564-75182583 | MS.gene049400:intron | 45.0% | |
| TAGATCAAACTGAGGCTGGT+GGG | - | chr3.1:75184201-75184220 | None:intergenic | 45.0% | |
| TCTCATGTTCTGATGCCTGA+TGG | + | chr3.1:75184302-75184321 | MS.gene049400:CDS | 45.0% | |
| TGTGGCCATTAATGAGGGTT+GGG | + | chr3.1:75182555-75182574 | MS.gene049400:intron | 45.0% | |
| TGTTCAAGGGAATCTGTGTG+TGG | + | chr3.1:75182601-75182620 | MS.gene049400:intron | 45.0% | |
| TTGGACTCCACCATATTCAC+AGG | + | chr3.1:75182634-75182653 | MS.gene049400:intron | 45.0% | |
| TTGTGGCCATTAATGAGGGT+TGG | + | chr3.1:75182554-75182573 | MS.gene049400:intron | 45.0% | |
| ! | ATGTATCGGCGGAATTGCTA+CGG | - | chr3.1:75181906-75181925 | None:intergenic | 45.0% |
| ! | TTTGGAAAGTGTGGGTGACT+TGG | + | chr3.1:75183630-75183649 | MS.gene049400:intron | 45.0% |
| !! | TAGCTTAGCTTGTTGCTCCA+TGG | - | chr3.1:75182980-75182999 | None:intergenic | 45.0% |
| !!! | ATAATTATTATTTTTAAAAC+TGG | - | chr3.1:75183954-75183973 | None:intergenic | 5.0% |
| AAAGACCTCTTGGCGCGTTT+AGG | - | chr3.1:75182009-75182028 | None:intergenic | 50.0% | |
| AGATCAAACTGAGGCTGGTG+GGG | - | chr3.1:75184200-75184219 | None:intergenic | 50.0% | |
| AGTCGAAGGGATCCATTTCG+AGG | - | chr3.1:75181750-75181769 | None:intergenic | 50.0% | |
| ATGTTGTGGCTGGTGCATGA+AGG | - | chr3.1:75184111-75184130 | None:intergenic | 50.0% | |
| ATTGAGATCGACGGTGGAAC+GGG | - | chr3.1:75181693-75181712 | None:intergenic | 50.0% | |
| CAATGTCCAGCCCCTGAAAT+TGG | - | chr3.1:75184271-75184290 | None:intergenic | 50.0% | |
| CAATTTCAGGGGCTGGACAT+TGG | + | chr3.1:75184269-75184288 | MS.gene049400:CDS | 50.0% | |
| CACCATATTCACAGGTGGAG+TGG | + | chr3.1:75182642-75182661 | MS.gene049400:intron | 50.0% | |
| CACTCCACCTGTGAATATGG+TGG | - | chr3.1:75182644-75182663 | None:intergenic | 50.0% | |
| CCAACCCATGCTGATACCTA+TGG | + | chr3.1:75184047-75184066 | MS.gene049400:CDS | 50.0% | |
| CCATAGGTATCAGCATGGGT+TGG | - | chr3.1:75184050-75184069 | None:intergenic | 50.0% | |
| CGACGATTTCGACCTCGAAA+TGG | + | chr3.1:75181735-75181754 | MS.gene049400:CDS | 50.0% | |
| GACTCCACCATATTCACAGG+TGG | + | chr3.1:75182637-75182656 | MS.gene049400:intron | 50.0% | |
| GATTGAGATCGACGGTGGAA+CGG | - | chr3.1:75181694-75181713 | None:intergenic | 50.0% | |
| GCGTCTGTAGCGATGAGATT+AGG | + | chr3.1:75182434-75182453 | MS.gene049400:intron | 50.0% | |
| GGCGGTAGGAGAATTGAGTT+TGG | - | chr3.1:75181866-75181885 | None:intergenic | 50.0% | |
| GTACCTCCGATTGAGATCGA+CGG | - | chr3.1:75181702-75181721 | None:intergenic | 50.0% | |
| GTAGATCAAACTGAGGCTGG+TGG | - | chr3.1:75184202-75184221 | None:intergenic | 50.0% | |
| GTTCCACCGTCGATCTCAAT+CGG | + | chr3.1:75181693-75181712 | MS.gene049400:CDS | 50.0% | |
| TCTGGCGAATCGTCAATCTG+CGG | + | chr3.1:75182113-75182132 | MS.gene049400:CDS | 50.0% | |
| TGCAACGACTTGAGCTGACA+TGG | - | chr3.1:75183530-75183549 | None:intergenic | 50.0% | |
| TGCATGGCCCTAAGATCGTT+TGG | - | chr3.1:75184137-75184156 | None:intergenic | 50.0% | |
| TGGGTAGATCAAACTGAGGC+TGG | - | chr3.1:75184205-75184224 | None:intergenic | 50.0% | |
| TGTAGCGATGAGATTAGGGG+TGG | + | chr3.1:75182439-75182458 | MS.gene049400:intron | 50.0% | |
| TGTGTGTGGGAACGTCGAAT+TGG | + | chr3.1:75182615-75182634 | MS.gene049400:intron | 50.0% | |
| TTCATGCACCAGCCACAACA+TGG | + | chr3.1:75184110-75184129 | MS.gene049400:CDS | 50.0% | |
| TTGATCCTAAACGCGCCAAG+AGG | + | chr3.1:75182001-75182020 | MS.gene049400:CDS | 50.0% | |
| TTTCGAGGTCGAAATCGTCG+GGG | - | chr3.1:75181735-75181754 | None:intergenic | 50.0% | |
| ! | AGGAGATCGTCGTGTTGTTG+CGG | - | chr3.1:75181811-75181830 | None:intergenic | 50.0% |
| ! | CTTGGCGCGTTTAGGATCAA+CGG | - | chr3.1:75182001-75182020 | None:intergenic | 50.0% |
| !! | GATAGGCTCAAGCTTGCTAC+TGG | + | chr3.1:75184017-75184036 | MS.gene049400:CDS | 50.0% |
| ACAGAAACGGAGGGACCATC+AGG | - | chr3.1:75184320-75184339 | None:intergenic | 55.0% | |
| CGACTTGAGCTGACATGGCA+TGG | - | chr3.1:75183525-75183544 | None:intergenic | 55.0% | |
| CGTTTGGACCATGTTGTGGC+TGG | - | chr3.1:75184121-75184140 | None:intergenic | 55.0% | |
| GCCCACTCCACCTGTGAATA+TGG | - | chr3.1:75182647-75182666 | None:intergenic | 55.0% | |
| GGTCGAAATCGTCGGGGATT+CGG | - | chr3.1:75181729-75181748 | None:intergenic | 55.0% | |
| GGTGGATCTTGGAACTGGAG+CGG | - | chr3.1:75181784-75181803 | None:intergenic | 55.0% | |
| TATCGGCCAATTTCAGGGGC+TGG | + | chr3.1:75184262-75184281 | MS.gene049400:CDS | 55.0% | |
| TATCGGCGGAATTGCTACGG+CGG | - | chr3.1:75181903-75181922 | None:intergenic | 55.0% | |
| ! | AGATCGTCGTGTTGTTGCGG+TGG | - | chr3.1:75181808-75181827 | None:intergenic | 55.0% |
| !! | GCTCAAGCTTGCTACTGGAG+AGG | + | chr3.1:75184022-75184041 | MS.gene049400:CDS | 55.0% |
| !! | GGAGAAGCGTCGAAGTCGAA+GGG | - | chr3.1:75181763-75181782 | None:intergenic | 55.0% |
| !! | GTGGTGGTGGATCTTGGAAC+TGG | - | chr3.1:75181789-75181808 | None:intergenic | 55.0% |
| AAACTGAGGCTGGTGGGGAC+TGG | - | chr3.1:75184195-75184214 | None:intergenic | 60.0% | |
| AGGGGCTGGACATTGGCAAC+AGG | + | chr3.1:75184276-75184295 | MS.gene049400:CDS | 60.0% | |
| CCACCGTCGATCTCAATCGG+AGG | + | chr3.1:75181696-75181715 | MS.gene049400:CDS | 60.0% | |
| CCTCCGATTGAGATCGACGG+TGG | - | chr3.1:75181699-75181718 | None:intergenic | 60.0% | |
| CGAATCGTCAATCTGCGGCG+AGG | + | chr3.1:75182118-75182137 | MS.gene049400:CDS | 60.0% | |
| GGAATTGCTACGGCGGTGAC+CGG | - | chr3.1:75181896-75181915 | None:intergenic | 60.0% | |
| GGGGCTGGACATTGGCAACA+GGG | + | chr3.1:75184277-75184296 | MS.gene049400:CDS | 60.0% | |
| TCTCCTACCGCCGCTAATGC+CGG | + | chr3.1:75181874-75181893 | MS.gene049400:CDS | 60.0% | |
| ! | TCGTCGTGTTGTTGCGGTGG+TGG | - | chr3.1:75181805-75181824 | None:intergenic | 60.0% |
| ! | TCGTGTTGTTGCGGTGGTGG+TGG | - | chr3.1:75181802-75181821 | None:intergenic | 60.0% |
| !! | CGGAGAAGCGTCGAAGTCGA+AGG | - | chr3.1:75181764-75181783 | None:intergenic | 60.0% |
| !! | GTTGCGGTGGTGGTGGATCT+TGG | - | chr3.1:75181795-75181814 | None:intergenic | 60.0% |
| ACGGCGGTGACCGGCATTAG+CGG | - | chr3.1:75181887-75181906 | None:intergenic | 65.0% | |
| CTGCGGCGAGGTCGAAAGAG+AGG | + | chr3.1:75182130-75182149 | MS.gene049400:CDS | 65.0% | |
| TGACCGGCATTAGCGGCGGT+AGG | - | chr3.1:75181880-75181899 | None:intergenic | 65.0% | |
| GCGGTGACCGGCATTAGCGG+CGG | - | chr3.1:75181884-75181903 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 75181679 | 75184364 | 75181679 | ID=MS.gene049400 |
| chr3.1 | mRNA | 75181679 | 75184364 | 75181679 | ID=MS.gene049400.t1;Parent=MS.gene049400 |
| chr3.1 | exon | 75181679 | 75182022 | 75181679 | ID=MS.gene049400.t1.exon1;Parent=MS.gene049400.t1 |
| chr3.1 | CDS | 75181679 | 75182022 | 75181679 | ID=cds.MS.gene049400.t1;Parent=MS.gene049400.t1 |
| chr3.1 | exon | 75182110 | 75182242 | 75182110 | ID=MS.gene049400.t1.exon2;Parent=MS.gene049400.t1 |
| chr3.1 | CDS | 75182110 | 75182242 | 75182110 | ID=cds.MS.gene049400.t1;Parent=MS.gene049400.t1 |
| chr3.1 | exon | 75182922 | 75183006 | 75182922 | ID=MS.gene049400.t1.exon3;Parent=MS.gene049400.t1 |
| chr3.1 | CDS | 75182922 | 75183006 | 75182922 | ID=cds.MS.gene049400.t1;Parent=MS.gene049400.t1 |
| chr3.1 | exon | 75183988 | 75184364 | 75183988 | ID=MS.gene049400.t1.exon4;Parent=MS.gene049400.t1 |
| chr3.1 | CDS | 75183988 | 75184364 | 75183988 | ID=cds.MS.gene049400.t1;Parent=MS.gene049400.t1 |
| Gene Sequence |
| Protein sequence |
