Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067900.t1 | XP_013446295.1 | 98.9 | 534 | 6 | 0 | 1 | 534 | 114 | 647 | 2.10E-173 | 619 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067900.t1 | Q9FH87 | 78.0 | 523 | 114 | 1 | 2 | 524 | 114 | 635 | 1.3e-104 | 381.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067900.t1 | A0A072TSC5 | 98.9 | 534 | 6 | 0 | 1 | 534 | 114 | 647 | 1.5e-173 | 619.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049850 | MS.gene067900 | 0.800063 | 1.72E-48 | -1.69E-46 |
| MS.gene052611 | MS.gene067900 | 0.862765 | 4.02E-64 | -1.69E-46 |
| MS.gene052612 | MS.gene067900 | 0.826619 | 2.46E-54 | -1.69E-46 |
| MS.gene052863 | MS.gene067900 | 0.805039 | 1.62E-49 | -1.69E-46 |
| MS.gene053144 | MS.gene067900 | 0.806736 | 7.12E-50 | -1.69E-46 |
| MS.gene055818 | MS.gene067900 | 0.804094 | 2.55E-49 | -1.69E-46 |
| MS.gene056542 | MS.gene067900 | 0.935472 | 8.03E-97 | -1.69E-46 |
| MS.gene056543 | MS.gene067900 | 0.943064 | 2.36E-102 | -1.69E-46 |
| MS.gene056545 | MS.gene067900 | 0.934439 | 4.03E-96 | -1.69E-46 |
| MS.gene056553 | MS.gene067900 | 0.88825 | 6.97E-73 | -1.69E-46 |
| MS.gene059154 | MS.gene067900 | 0.814533 | 1.47E-51 | -1.69E-46 |
| MS.gene059937 | MS.gene067900 | 0.80632 | 8.71E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 121 sgRNAs with CRISPR-Local
Find 159 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACCTTTGTCATCATGATTAA+TGG | 0.181858 | 8.2:+31955144 | MS.gene067900:CDS |
| CAAAAGGGGTTATGAGCTTT+TGG | 0.229623 | 8.2:+31954873 | MS.gene067900:CDS |
| TGCATATAAGTAAGCTGATT+TGG | 0.258575 | 8.2:-31954922 | None:intergenic |
| ATGCCGGAAATTTAGCTTAT+AGG | 0.267981 | 8.2:+31954128 | MS.gene067900:CDS |
| TTGAGTAAAATGAGACAATT+TGG | 0.268172 | 8.2:+31954223 | MS.gene067900:CDS |
| GTATGCTCAAGCTGGGAAAA+TGG | 0.278892 | 8.2:+31954642 | MS.gene067900:CDS |
| AGTTTATAAGGCCATGATTA+AGG | 0.284375 | 8.2:+31954198 | MS.gene067900:CDS |
| GAGACAATTTGGTGCTGTTT+GGG | 0.321750 | 8.2:+31954234 | MS.gene067900:CDS |
| AAACCTATAAGCTAAATTTC+CGG | 0.323579 | 8.2:-31954131 | None:intergenic |
| GCATATAAGTAAGCTGATTT+GGG | 0.325343 | 8.2:-31954921 | None:intergenic |
| TTAGATGAAATGCCTAAGTA+TGG | 0.332627 | 8.2:+31954370 | MS.gene067900:CDS |
| CCTTTGTCATCATGATTAAT+GGG | 0.333110 | 8.2:+31955145 | MS.gene067900:CDS |
| TCAAGCAAGGGGTTCGGCTT+TGG | 0.337565 | 8.2:+31955082 | MS.gene067900:CDS |
| CACGGACAAGGTAAGGAAAA+TGG | 0.339996 | 8.2:+31955530 | MS.gene067900:CDS |
| GCTAGACAACGCCGTTGGGG+TGG | 0.348764 | 8.2:+31955651 | MS.gene067900:CDS |
| CTTCTAAGCAAAGTAGTTAT+AGG | 0.351327 | 8.2:+31954164 | MS.gene067900:CDS |
| ATTAGGTTGGCTTGCAAGTT+GGG | 0.352459 | 8.2:+31955054 | MS.gene067900:CDS |
| ATAAGCTTTGCAAAAGTATC+TGG | 0.352575 | 8.2:-31955462 | None:intergenic |
| GGAAGAATTGGAGGAGTGTA+TGG | 0.364154 | 8.2:+31954969 | MS.gene067900:CDS |
| GCATAGTCAAGAAGTTTATA+AGG | 0.366335 | 8.2:+31954186 | MS.gene067900:CDS |
| ACATCTATAATACTGTCATT+AGG | 0.373878 | 8.2:+31955037 | MS.gene067900:CDS |
| TGAAATGAGAATGGAAAATT+CGG | 0.375905 | 8.2:+31954267 | MS.gene067900:CDS |
| TATGCTCAAGCTGGGAAAAT+GGG | 0.387683 | 8.2:+31954643 | MS.gene067900:CDS |
| TGAGACAATTTGGTGCTGTT+TGG | 0.388448 | 8.2:+31954233 | MS.gene067900:CDS |
| GCAGAAGATTGGTTGTGTTC+CGG | 0.397872 | 8.2:+31955008 | MS.gene067900:CDS |
| TAGACAACGCCGTTGGGGTG+GGG | 0.399377 | 8.2:+31955653 | MS.gene067900:CDS |
| CATTAGGTTGGCTTGCAAGT+TGG | 0.408375 | 8.2:+31955053 | MS.gene067900:CDS |
| GAGGGCTAGACAACGCCGTT+GGG | 0.414709 | 8.2:+31955647 | MS.gene067900:CDS |
| CTTGGTGGGTATGCTCAAGC+TGG | 0.417669 | 8.2:+31954634 | MS.gene067900:CDS |
| AGACAACGCCGTTGGGGTGG+GGG | 0.418078 | 8.2:+31955654 | MS.gene067900:CDS |
| GTGTAAGAATGGTAGTGTTA+AGG | 0.420302 | 8.2:+31954438 | MS.gene067900:CDS |
| AAGAGCTGAGAAACTTGAAA+TGG | 0.429062 | 8.2:+31955284 | MS.gene067900:CDS |
| CATCTCACAACCTTTAGAAC+TGG | 0.429959 | 8.2:-31955331 | None:intergenic |
| TTTACTCAAAACCTTAATCA+TGG | 0.430076 | 8.2:-31954209 | None:intergenic |
| TTCAAAGAAATGGTTGGGAG+AGG | 0.437466 | 8.2:+31955207 | MS.gene067900:CDS |
| GAGAGGTCAAGCAAGGGGTT+CGG | 0.437753 | 8.2:+31955076 | MS.gene067900:CDS |
| GATGGTTAGTAAAGCTATTG+AGG | 0.439743 | 8.2:+31954345 | MS.gene067900:CDS |
| TGTATAAACGGAGAGGAGAG+AGG | 0.446783 | 8.2:+31955580 | MS.gene067900:CDS |
| ATGTGGGTGCATGGACAATC+TGG | 0.446933 | 8.2:+31955355 | MS.gene067900:CDS |
| GGTTCGGCTTTGGAATGAAA+TGG | 0.453739 | 8.2:+31955092 | MS.gene067900:CDS |
| AGAGAGGGATTTGAAAGAAA+AGG | 0.456594 | 8.2:+31955596 | MS.gene067900:CDS |
| CTAGACAACGCCGTTGGGGT+GGG | 0.460294 | 8.2:+31955652 | MS.gene067900:CDS |
| TCATGAAAAGAAGGAAGAAT+TGG | 0.461075 | 8.2:+31954957 | MS.gene067900:CDS |
| ATGACAAAGGTGTCGATGCC+TGG | 0.463172 | 8.2:-31955132 | None:intergenic |
| TTGAATCGTTGCGGCGATGC+CGG | 0.464083 | 8.2:+31954112 | MS.gene067900:CDS |
| TCACTTTCAAGATGTATAAA+CGG | 0.465624 | 8.2:+31955568 | MS.gene067900:CDS |
| GATTAATGGGTTTCTTGAGC+AGG | 0.470132 | 8.2:+31955158 | MS.gene067900:CDS |
| GTATAAACGGAGAGGAGAGA+GGG | 0.470974 | 8.2:+31955581 | MS.gene067900:CDS |
| AGTTGTATCACCAGTTCTAA+AGG | 0.471518 | 8.2:+31955321 | MS.gene067900:CDS |
| CATGTCTATGCAAAACGAAC+AGG | 0.475450 | 8.2:-31955415 | None:intergenic |
| TTTGAAAGAGATGAGAAGGA+AGG | 0.479605 | 8.2:+31954681 | MS.gene067900:CDS |
| TTGAAATGGCTAAAGATGCT+TGG | 0.488612 | 8.2:+31955298 | MS.gene067900:CDS |
| TGAAAGAGATGAGAAGGAAG+GGG | 0.490452 | 8.2:+31954683 | MS.gene067900:CDS |
| TTGTATGGTTGGTGCAAGGA+AGG | 0.492109 | 8.2:+31954529 | MS.gene067900:CDS |
| TTGAAAGAGATGAGAAGGAA+GGG | 0.493740 | 8.2:+31954682 | MS.gene067900:CDS |
| GTGAATGAGATGCAGAAGAT+TGG | 0.495460 | 8.2:+31954997 | MS.gene067900:CDS |
| TAGAAATCACGGACAAGGTA+AGG | 0.503341 | 8.2:+31955523 | MS.gene067900:CDS |
| ACAGTATACGATGCTGCATT+CGG | 0.506721 | 8.2:-31954712 | None:intergenic |
| GTTAATTGATGAAATGAGAA+TGG | 0.507175 | 8.2:+31954258 | MS.gene067900:CDS |
| ACGTATACTACATTGATAAG+TGG | 0.507559 | 8.2:+31954829 | MS.gene067900:CDS |
| CGTATACTACATTGATAAGT+GGG | 0.508054 | 8.2:+31954830 | MS.gene067900:CDS |
| TCTTTCAAAGTACCGTATTG+AGG | 0.508140 | 8.2:-31955243 | None:intergenic |
| CTATAATACTGTCATTAGGT+TGG | 0.509615 | 8.2:+31955041 | MS.gene067900:CDS |
| GAGATTTGCTTCAGCTAGGA+TGG | 0.509801 | 8.2:+31954327 | MS.gene067900:CDS |
| CATGGTGGCTCATGAAAAGA+AGG | 0.510020 | 8.2:+31954948 | MS.gene067900:CDS |
| GAAGCGAGTGGGCTCAGTCC+AGG | 0.511876 | 8.2:+31955114 | MS.gene067900:CDS |
| TTGGATGCTTTGTGTAAGAA+TGG | 0.521272 | 8.2:+31954427 | MS.gene067900:CDS |
| GCTTACTTATATGCATATCA+TGG | 0.522889 | 8.2:+31954930 | MS.gene067900:CDS |
| TTACATCGTTGTTGTATGGT+TGG | 0.524083 | 8.2:+31954518 | MS.gene067900:CDS |
| GGAGGGCTAGACAACGCCGT+TGG | 0.529284 | 8.2:+31955646 | MS.gene067900:CDS |
| TGAAAAGAAGGAAGAATTGG+AGG | 0.529348 | 8.2:+31954960 | MS.gene067900:CDS |
| TCAAAGAAATGGTTGGGAGA+GGG | 0.533411 | 8.2:+31955208 | MS.gene067900:CDS |
| GTTGGCTTGCAAGTTGGGAG+AGG | 0.537224 | 8.2:+31955059 | MS.gene067900:CDS |
| ACATGTGCTGGTTCAAATGA+AGG | 0.542498 | 8.2:+31954570 | MS.gene067900:CDS |
| AAAAGATGGGAGGAAGAGGA+GGG | 0.542826 | 8.2:+31955629 | MS.gene067900:CDS |
| GTTGTGTAAGCATGAAAAGT+TGG | 0.546298 | 8.2:+31954747 | MS.gene067900:CDS |
| GGGGATTGAGCCGGATATTG+TGG | 0.546350 | 8.2:+31954597 | MS.gene067900:CDS |
| CTGGTTCAAATGAAGGATGC+GGG | 0.550240 | 8.2:+31954577 | MS.gene067900:CDS |
| TGGAATGAAATGGAAGCGAG+TGG | 0.550783 | 8.2:+31955102 | MS.gene067900:CDS |
| GAAGGATGCGGGGATTGAGC+CGG | 0.552236 | 8.2:+31954588 | MS.gene067900:CDS |
| TAAAGGTTGTGAGATGAATG+TGG | 0.553993 | 8.2:+31955338 | MS.gene067900:CDS |
| ATGCTCAAGCTGGGAAAATG+GGG | 0.558098 | 8.2:+31954644 | MS.gene067900:CDS |
| GATGTAAAATGCTTAACTGT+CGG | 0.569242 | 8.2:-31954502 | None:intergenic |
| GGATTTGAAAGAAAAGGTGA+AGG | 0.570883 | 8.2:+31955602 | MS.gene067900:CDS |
| GTATTATAGATGTTAAGATC+CGG | 0.581417 | 8.2:-31955027 | None:intergenic |
| TGTGGAGGCAAAACATGTGC+TGG | 0.585521 | 8.2:+31954558 | MS.gene067900:CDS |
| TTTGCAAAAGTATCTGGCTG+TGG | 0.587706 | 8.2:-31955456 | None:intergenic |
| GTGAGATGAATGTGGGTGCA+TGG | 0.587814 | 8.2:+31955346 | MS.gene067900:CDS |
| TTTGTTGAGATGCAGAGGAA+TGG | 0.588188 | 8.2:+31954787 | MS.gene067900:CDS |
| TGAGGAGATTTGCTTCAGCT+AGG | 0.591934 | 8.2:+31954323 | MS.gene067900:CDS |
| AGGGCTAGACAACGCCGTTG+GGG | 0.592734 | 8.2:+31955648 | MS.gene067900:CDS |
| TTCAAAAGGACATGTGAAGG+AGG | 0.600343 | 8.2:+31955392 | MS.gene067900:CDS |
| GACAATTTGGTGCTGTTTGG+GGG | 0.601159 | 8.2:+31954236 | MS.gene067900:CDS |
| GTGTAAGCATGAAAAGTTGG+AGG | 0.605967 | 8.2:+31954750 | MS.gene067900:CDS |
| TTGGATCAGATGATACAAGA+AGG | 0.606771 | 8.2:+31954892 | MS.gene067900:CDS |
| TGCAGTAGAAATCACGGACA+AGG | 0.607021 | 8.2:+31955518 | MS.gene067900:CDS |
| AAGTTGGGAGAGGTCAAGCA+AGG | 0.613787 | 8.2:+31955069 | MS.gene067900:CDS |
| GCAGAGGAATGGTTGTCAGA+TGG | 0.617466 | 8.2:+31954798 | MS.gene067900:CDS |
| AGTTGGGAGAGGTCAAGCAA+GGG | 0.618137 | 8.2:+31955070 | MS.gene067900:CDS |
| CCCATTAATCATGATGACAA+AGG | 0.619876 | 8.2:-31955145 | None:intergenic |
| AGACAATTTGGTGCTGTTTG+GGG | 0.622059 | 8.2:+31954235 | MS.gene067900:CDS |
| TAAGCATGAAAAGTTGGAGG+AGG | 0.625657 | 8.2:+31954753 | MS.gene067900:CDS |
| TGTATGGTTGGTGCAAGGAA+GGG | 0.625820 | 8.2:+31954530 | MS.gene067900:CDS |
| AGAATTTGCAGTAGAAATCA+CGG | 0.631509 | 8.2:+31955512 | MS.gene067900:CDS |
| TCAACCTCACAACCATACTT+AGG | 0.640434 | 8.2:-31954382 | None:intergenic |
| GCTGGTTCAAATGAAGGATG+CGG | 0.642813 | 8.2:+31954576 | MS.gene067900:CDS |
| GGAATGAAATGGAAGCGAGT+GGG | 0.650710 | 8.2:+31955103 | MS.gene067900:CDS |
| GTTGTTGTATGGTTGGTGCA+AGG | 0.655067 | 8.2:+31954525 | MS.gene067900:CDS |
| CATATAAGTAAGCTGATTTG+GGG | 0.655892 | 8.2:-31954920 | None:intergenic |
| CAAGGAAGGGAAGCTTGTGG+AGG | 0.656855 | 8.2:+31954543 | MS.gene067900:CDS |
| TTGGTGGGTATGCTCAAGCT+GGG | 0.658093 | 8.2:+31954635 | MS.gene067900:CDS |
| TGCTCAAGCTGGGAAAATGG+GGG | 0.662687 | 8.2:+31954645 | MS.gene067900:CDS |
| GTTGGGAGAGGTCAAGCAAG+GGG | 0.663850 | 8.2:+31955071 | MS.gene067900:CDS |
| TACTTATATGCATATCATGG+TGG | 0.664946 | 8.2:+31954933 | MS.gene067900:CDS |
| TTCAAGATGTATAAACGGAG+AGG | 0.678778 | 8.2:+31955573 | MS.gene067900:CDS |
| TGGTTCAAATGAAGGATGCG+GGG | 0.682569 | 8.2:+31954578 | MS.gene067900:CDS |
| AAAGGTTGTGAGATGAATGT+GGG | 0.687470 | 8.2:+31955339 | MS.gene067900:CDS |
| AATGCCTAAGTATGGTTGTG+AGG | 0.688699 | 8.2:+31954378 | MS.gene067900:CDS |
| GGATGTTTGTTGAGATGCAG+AGG | 0.690569 | 8.2:+31954782 | MS.gene067900:CDS |
| GTGCAAGGAAGGGAAGCTTG+TGG | 0.705273 | 8.2:+31954540 | MS.gene067900:CDS |
| AAAAGTTGGAGGAGGCAATG+CGG | 0.738384 | 8.2:+31954761 | MS.gene067900:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATCAAAATAACAAAAACTTG+CGG | - | chr8.2:31954304-31954323 | None:intergenic | 20.0% |
| !! | TTATTAAAAACCACAATATC+CGG | - | chr8.2:31954610-31954629 | None:intergenic | 20.0% |
| !!! | AAGTTTTTGTTATTTTGATG+AGG | + | chr8.2:31954305-31954324 | MS.gene067900:CDS | 20.0% |
| !!! | TTTTTAATAATTTGCTTGGT+GGG | + | chr8.2:31954620-31954639 | MS.gene067900:CDS | 20.0% |
| ! | AAACCTATAAGCTAAATTTC+CGG | - | chr8.2:31954134-31954153 | None:intergenic | 25.0% |
| ! | ACATCTATAATACTGTCATT+AGG | + | chr8.2:31955037-31955056 | MS.gene067900:CDS | 25.0% |
| ! | GTATTATAGATGTTAAGATC+CGG | - | chr8.2:31955030-31955049 | None:intergenic | 25.0% |
| ! | GTTAATTGATGAAATGAGAA+TGG | + | chr8.2:31954258-31954277 | MS.gene067900:CDS | 25.0% |
| ! | TCACTTTCAAGATGTATAAA+CGG | + | chr8.2:31955568-31955587 | MS.gene067900:CDS | 25.0% |
| ! | TGAAATGAGAATGGAAAATT+CGG | + | chr8.2:31954267-31954286 | MS.gene067900:CDS | 25.0% |
| ! | TTGAGTAAAATGAGACAATT+TGG | + | chr8.2:31954223-31954242 | MS.gene067900:CDS | 25.0% |
| ! | TTTACTCAAAACCTTAATCA+TGG | - | chr8.2:31954212-31954231 | None:intergenic | 25.0% |
| !!! | AGCTTATAGGTTTTTTTCTT+GGG | + | chr8.2:31954141-31954160 | MS.gene067900:CDS | 25.0% |
| !!! | AGTTTTTCAAAGAAATGGTT+GGG | + | chr8.2:31955202-31955221 | MS.gene067900:CDS | 25.0% |
| !!! | GTGGTTTTTAATAATTTGCT+TGG | + | chr8.2:31954616-31954635 | MS.gene067900:CDS | 25.0% |
| !!! | GTTTTTAATAATTTGCTTGG+TGG | + | chr8.2:31954619-31954638 | MS.gene067900:CDS | 25.0% |
| !!! | TAGCTTATAGGTTTTTTTCT+TGG | + | chr8.2:31954140-31954159 | MS.gene067900:CDS | 25.0% |
| ACCTTTGTCATCATGATTAA+TGG | + | chr8.2:31955144-31955163 | MS.gene067900:CDS | 30.0% | |
| ACGTATACTACATTGATAAG+TGG | + | chr8.2:31954829-31954848 | MS.gene067900:CDS | 30.0% | |
| AGAATTTGCAGTAGAAATCA+CGG | + | chr8.2:31955512-31955531 | MS.gene067900:CDS | 30.0% | |
| AGTTTATAAGGCCATGATTA+AGG | + | chr8.2:31954198-31954217 | MS.gene067900:CDS | 30.0% | |
| CCTTTGTCATCATGATTAAT+GGG | + | chr8.2:31955145-31955164 | MS.gene067900:CDS | 30.0% | |
| CGTATACTACATTGATAAGT+GGG | + | chr8.2:31954830-31954849 | MS.gene067900:CDS | 30.0% | |
| CTATAATACTGTCATTAGGT+TGG | + | chr8.2:31955041-31955060 | MS.gene067900:CDS | 30.0% | |
| CTTCTAAGCAAAGTAGTTAT+AGG | + | chr8.2:31954164-31954183 | MS.gene067900:CDS | 30.0% | |
| GATGTAAAATGCTTAACTGT+CGG | - | chr8.2:31954505-31954524 | None:intergenic | 30.0% | |
| GCATAGTCAAGAAGTTTATA+AGG | + | chr8.2:31954186-31954205 | MS.gene067900:CDS | 30.0% | |
| GCTTACTTATATGCATATCA+TGG | + | chr8.2:31954930-31954949 | MS.gene067900:CDS | 30.0% | |
| TACTTATATGCATATCATGG+TGG | + | chr8.2:31954933-31954952 | MS.gene067900:CDS | 30.0% | |
| TCATGAAAAGAAGGAAGAAT+TGG | + | chr8.2:31954957-31954976 | MS.gene067900:CDS | 30.0% | |
| TGCATATAAGTAAGCTGATT+TGG | - | chr8.2:31954925-31954944 | None:intergenic | 30.0% | |
| TTAGATGAAATGCCTAAGTA+TGG | + | chr8.2:31954370-31954389 | MS.gene067900:CDS | 30.0% | |
| ! | ATTCATGCACTGTTTTCAAA+AGG | + | chr8.2:31955378-31955397 | MS.gene067900:CDS | 30.0% |
| ! | CATTTTACATCGTTGTTGTA+TGG | + | chr8.2:31954514-31954533 | MS.gene067900:CDS | 30.0% |
| ! | GCATATAAGTAAGCTGATTT+GGG | - | chr8.2:31954924-31954943 | None:intergenic | 30.0% |
| !! | ATAAGCTTTGCAAAAGTATC+TGG | - | chr8.2:31955465-31955484 | None:intergenic | 30.0% |
| !! | ATCTTTTGAAAGAGATGAGA+AGG | + | chr8.2:31954677-31954696 | MS.gene067900:CDS | 30.0% |
| !! | CATATAAGTAAGCTGATTTG+GGG | - | chr8.2:31954923-31954942 | None:intergenic | 30.0% |
| !! | GAGTTTTTCAAAGAAATGGT+TGG | + | chr8.2:31955201-31955220 | MS.gene067900:CDS | 30.0% |
| !! | GGGAAATCAAAAAGCATTAT+AGG | + | chr8.2:31955674-31955693 | MS.gene067900:CDS | 30.0% |
| !! | TTGCGAGTTTTTCAAAGAAA+TGG | + | chr8.2:31955197-31955216 | MS.gene067900:CDS | 30.0% |
| !!! | AGGTTGATGAATACGTTTTT+GGG | + | chr8.2:31954398-31954417 | MS.gene067900:CDS | 30.0% |
| AAAGGTTGTGAGATGAATGT+GGG | + | chr8.2:31955339-31955358 | MS.gene067900:CDS | 35.0% | |
| AAGAGCTGAGAAACTTGAAA+TGG | + | chr8.2:31955284-31955303 | MS.gene067900:CDS | 35.0% | |
| AAGGTGAAGGAGAAAAAAGA+TGG | + | chr8.2:31955615-31955634 | MS.gene067900:CDS | 35.0% | |
| AGAGAGGGATTTGAAAGAAA+AGG | + | chr8.2:31955596-31955615 | MS.gene067900:CDS | 35.0% | |
| AGGTGAAGGAGAAAAAAGAT+GGG | + | chr8.2:31955616-31955635 | MS.gene067900:CDS | 35.0% | |
| CCCATTAATCATGATGACAA+AGG | - | chr8.2:31955148-31955167 | None:intergenic | 35.0% | |
| GATGGTTAGTAAAGCTATTG+AGG | + | chr8.2:31954345-31954364 | MS.gene067900:CDS | 35.0% | |
| GGATTTGAAAGAAAAGGTGA+AGG | + | chr8.2:31955602-31955621 | MS.gene067900:CDS | 35.0% | |
| GTTGTGTAAGCATGAAAAGT+TGG | + | chr8.2:31954747-31954766 | MS.gene067900:CDS | 35.0% | |
| TAAAGGTTGTGAGATGAATG+TGG | + | chr8.2:31955338-31955357 | MS.gene067900:CDS | 35.0% | |
| TAAGTGGGGGAAAATCAAAA+GGG | + | chr8.2:31954858-31954877 | MS.gene067900:CDS | 35.0% | |
| TGAAAAGAAGGAAGAATTGG+AGG | + | chr8.2:31954960-31954979 | MS.gene067900:CDS | 35.0% | |
| TTACATCGTTGTTGTATGGT+TGG | + | chr8.2:31954518-31954537 | MS.gene067900:CDS | 35.0% | |
| TTCAAGATGTATAAACGGAG+AGG | + | chr8.2:31955573-31955592 | MS.gene067900:CDS | 35.0% | |
| TTGAAAGAGATGAGAAGGAA+GGG | + | chr8.2:31954682-31954701 | MS.gene067900:CDS | 35.0% | |
| TTGAAATGGCTAAAGATGCT+TGG | + | chr8.2:31955298-31955317 | MS.gene067900:CDS | 35.0% | |
| TTGGATCAGATGATACAAGA+AGG | + | chr8.2:31954892-31954911 | MS.gene067900:CDS | 35.0% | |
| TTGGATGCTTTGTGTAAGAA+TGG | + | chr8.2:31954427-31954446 | MS.gene067900:CDS | 35.0% | |
| TTTGAAAGAGATGAGAAGGA+AGG | + | chr8.2:31954681-31954700 | MS.gene067900:CDS | 35.0% | |
| ! | AGTTGTATCACCAGTTCTAA+AGG | + | chr8.2:31955321-31955340 | MS.gene067900:CDS | 35.0% |
| ! | ATGCCGGAAATTTAGCTTAT+AGG | + | chr8.2:31954128-31954147 | MS.gene067900:CDS | 35.0% |
| ! | GTGTAAGAATGGTAGTGTTA+AGG | + | chr8.2:31954438-31954457 | MS.gene067900:CDS | 35.0% |
| ! | GTTTTCAAAAGGACATGTGA+AGG | + | chr8.2:31955389-31955408 | MS.gene067900:CDS | 35.0% |
| ! | TTCGTTTTGCATAGACATGA+TGG | + | chr8.2:31955419-31955438 | MS.gene067900:CDS | 35.0% |
| !! | ATAAGTGGGTTTTGTAAGTG+GGG | + | chr8.2:31954844-31954863 | MS.gene067900:CDS | 35.0% |
| !! | GATAAGTGGGTTTTGTAAGT+GGG | + | chr8.2:31954843-31954862 | MS.gene067900:CDS | 35.0% |
| !! | TCTTTCAAAGTACCGTATTG+AGG | - | chr8.2:31955246-31955265 | None:intergenic | 35.0% |
| !! | TGATAAGTGGGTTTTGTAAG+TGG | + | chr8.2:31954842-31954861 | MS.gene067900:CDS | 35.0% |
| !!! | ATACGTTTTTGGGTGTCTTT+TGG | + | chr8.2:31954408-31954427 | MS.gene067900:CDS | 35.0% |
| !!! | GAGGTTGATGAATACGTTTT+TGG | + | chr8.2:31954397-31954416 | MS.gene067900:CDS | 35.0% |
| AAGTGGGGGAAAATCAAAAG+GGG | + | chr8.2:31954859-31954878 | MS.gene067900:CDS | 40.0% | |
| AATGCCTAAGTATGGTTGTG+AGG | + | chr8.2:31954378-31954397 | MS.gene067900:CDS | 40.0% | |
| ACAGTATACGATGCTGCATT+CGG | - | chr8.2:31954715-31954734 | None:intergenic | 40.0% | |
| AGAAAAAAGATGGGAGGAAG+AGG | + | chr8.2:31955625-31955644 | MS.gene067900:CDS | 40.0% | |
| CATGTCTATGCAAAACGAAC+AGG | - | chr8.2:31955418-31955437 | None:intergenic | 40.0% | |
| GTAAGTGGGGGAAAATCAAA+AGG | + | chr8.2:31954857-31954876 | MS.gene067900:CDS | 40.0% | |
| GTGAATGAGATGCAGAAGAT+TGG | + | chr8.2:31954997-31955016 | MS.gene067900:CDS | 40.0% | |
| GTGTAAGCATGAAAAGTTGG+AGG | + | chr8.2:31954750-31954769 | MS.gene067900:CDS | 40.0% | |
| TAAGCATGAAAAGTTGGAGG+AGG | + | chr8.2:31954753-31954772 | MS.gene067900:CDS | 40.0% | |
| TAGAAATCACGGACAAGGTA+AGG | + | chr8.2:31955523-31955542 | MS.gene067900:CDS | 40.0% | |
| TATGCTCAAGCTGGGAAAAT+GGG | + | chr8.2:31954643-31954662 | MS.gene067900:CDS | 40.0% | |
| TCAAAGAAATGGTTGGGAGA+GGG | + | chr8.2:31955208-31955227 | MS.gene067900:CDS | 40.0% | |
| TCAACCTCACAACCATACTT+AGG | - | chr8.2:31954385-31954404 | None:intergenic | 40.0% | |
| TGAAAGAGATGAGAAGGAAG+GGG | + | chr8.2:31954683-31954702 | MS.gene067900:CDS | 40.0% | |
| TGAAGGAGAAAAAAGATGGG+AGG | + | chr8.2:31955619-31955638 | MS.gene067900:CDS | 40.0% | |
| TTCAAAAGGACATGTGAAGG+AGG | + | chr8.2:31955392-31955411 | MS.gene067900:CDS | 40.0% | |
| TTCAAAGAAATGGTTGGGAG+AGG | + | chr8.2:31955207-31955226 | MS.gene067900:CDS | 40.0% | |
| TTTGTTGAGATGCAGAGGAA+TGG | + | chr8.2:31954787-31954806 | MS.gene067900:CDS | 40.0% | |
| ! | ACTTTTGCAAAGCTTATGCG+CGG | + | chr8.2:31955468-31955487 | MS.gene067900:CDS | 40.0% |
| ! | CAAAAGGGGTTATGAGCTTT+TGG | + | chr8.2:31954873-31954892 | MS.gene067900:CDS | 40.0% |
| ! | CTTTTTGCTGCTCCTCAATA+CGG | + | chr8.2:31955231-31955250 | MS.gene067900:CDS | 40.0% |
| !! | ACATGTGCTGGTTCAAATGA+AGG | + | chr8.2:31954570-31954589 | MS.gene067900:CDS | 40.0% |
| !! | AGACAATTTGGTGCTGTTTG+GGG | + | chr8.2:31954235-31954254 | MS.gene067900:CDS | 40.0% |
| !! | ATTAGGTTGGCTTGCAAGTT+GGG | + | chr8.2:31955054-31955073 | MS.gene067900:CDS | 40.0% |
| !! | CATCTCACAACCTTTAGAAC+TGG | - | chr8.2:31955334-31955353 | None:intergenic | 40.0% |
| !! | GAACGTGTTTTGAATCGTTG+CGG | + | chr8.2:31954103-31954122 | MS.gene067900:CDS | 40.0% |
| !! | GAGACAATTTGGTGCTGTTT+GGG | + | chr8.2:31954234-31954253 | MS.gene067900:CDS | 40.0% |
| !! | GATTAATGGGTTTCTTGAGC+AGG | + | chr8.2:31955158-31955177 | MS.gene067900:CDS | 40.0% |
| !! | TAAGTGGGTTTTGTAAGTGG+GGG | + | chr8.2:31954845-31954864 | MS.gene067900:CDS | 40.0% |
| !! | TGAGACAATTTGGTGCTGTT+TGG | + | chr8.2:31954233-31954252 | MS.gene067900:CDS | 40.0% |
| !! | TTTGCAAAAGTATCTGGCTG+TGG | - | chr8.2:31955459-31955478 | None:intergenic | 40.0% |
| AAAAAGATGGGAGGAAGAGG+AGG | + | chr8.2:31955628-31955647 | MS.gene067900:CDS | 45.0% | |
| AAAAGATGGGAGGAAGAGGA+GGG | + | chr8.2:31955629-31955648 | MS.gene067900:CDS | 45.0% | |
| AAAAGTTGGAGGAGGCAATG+CGG | + | chr8.2:31954761-31954780 | MS.gene067900:CDS | 45.0% | |
| ATGCTCAAGCTGGGAAAATG+GGG | + | chr8.2:31954644-31954663 | MS.gene067900:CDS | 45.0% | |
| CACGGACAAGGTAAGGAAAA+TGG | + | chr8.2:31955530-31955549 | MS.gene067900:CDS | 45.0% | |
| CATGGTGGCTCATGAAAAGA+AGG | + | chr8.2:31954948-31954967 | MS.gene067900:CDS | 45.0% | |
| CTGGTTCAAATGAAGGATGC+GGG | + | chr8.2:31954577-31954596 | MS.gene067900:CDS | 45.0% | |
| GGAATGAAATGGAAGCGAGT+GGG | + | chr8.2:31955103-31955122 | MS.gene067900:CDS | 45.0% | |
| GTATAAACGGAGAGGAGAGA+GGG | + | chr8.2:31955581-31955600 | MS.gene067900:CDS | 45.0% | |
| GTATGCTCAAGCTGGGAAAA+TGG | + | chr8.2:31954642-31954661 | MS.gene067900:CDS | 45.0% | |
| TGCAGTAGAAATCACGGACA+AGG | + | chr8.2:31955518-31955537 | MS.gene067900:CDS | 45.0% | |
| TGGAATGAAATGGAAGCGAG+TGG | + | chr8.2:31955102-31955121 | MS.gene067900:CDS | 45.0% | |
| TGGTTCAAATGAAGGATGCG+GGG | + | chr8.2:31954578-31954597 | MS.gene067900:CDS | 45.0% | |
| TGTATAAACGGAGAGGAGAG+AGG | + | chr8.2:31955580-31955599 | MS.gene067900:CDS | 45.0% | |
| ! | GAGATTTGCTTCAGCTAGGA+TGG | + | chr8.2:31954327-31954346 | MS.gene067900:CDS | 45.0% |
| ! | GCAGAAGATTGGTTGTGTTC+CGG | + | chr8.2:31955008-31955027 | MS.gene067900:CDS | 45.0% |
| ! | GCTGGTTCAAATGAAGGATG+CGG | + | chr8.2:31954576-31954595 | MS.gene067900:CDS | 45.0% |
| ! | GGAAGAATTGGAGGAGTGTA+TGG | + | chr8.2:31954969-31954988 | MS.gene067900:CDS | 45.0% |
| ! | GGATGTTTGTTGAGATGCAG+AGG | + | chr8.2:31954782-31954801 | MS.gene067900:CDS | 45.0% |
| ! | GTTGTTGTATGGTTGGTGCA+AGG | + | chr8.2:31954525-31954544 | MS.gene067900:CDS | 45.0% |
| ! | TGAGGAGATTTGCTTCAGCT+AGG | + | chr8.2:31954323-31954342 | MS.gene067900:CDS | 45.0% |
| ! | TGTATGGTTGGTGCAAGGAA+GGG | + | chr8.2:31954530-31954549 | MS.gene067900:CDS | 45.0% |
| ! | TTGTATGGTTGGTGCAAGGA+AGG | + | chr8.2:31954529-31954548 | MS.gene067900:CDS | 45.0% |
| !! | CATTAGGTTGGCTTGCAAGT+TGG | + | chr8.2:31955053-31955072 | MS.gene067900:CDS | 45.0% |
| !! | GACAATTTGGTGCTGTTTGG+GGG | + | chr8.2:31954236-31954255 | MS.gene067900:CDS | 45.0% |
| !! | GGTTCGGCTTTGGAATGAAA+TGG | + | chr8.2:31955092-31955111 | MS.gene067900:CDS | 45.0% |
| !!! | CGTCGCTTTTTGAGGATATG+AGG | + | chr8.2:31954467-31954486 | MS.gene067900:CDS | 45.0% |
| AAGTTGGGAGAGGTCAAGCA+AGG | + | chr8.2:31955069-31955088 | MS.gene067900:CDS | 50.0% | |
| AGTTGGGAGAGGTCAAGCAA+GGG | + | chr8.2:31955070-31955089 | MS.gene067900:CDS | 50.0% | |
| ATGTGGGTGCATGGACAATC+TGG | + | chr8.2:31955355-31955374 | MS.gene067900:CDS | 50.0% | |
| GCAGAGGAATGGTTGTCAGA+TGG | + | chr8.2:31954798-31954817 | MS.gene067900:CDS | 50.0% | |
| GTGAGATGAATGTGGGTGCA+TGG | + | chr8.2:31955346-31955365 | MS.gene067900:CDS | 50.0% | |
| TGCTCAAGCTGGGAAAATGG+GGG | + | chr8.2:31954645-31954664 | MS.gene067900:CDS | 50.0% | |
| TGTGGAGGCAAAACATGTGC+TGG | + | chr8.2:31954558-31954577 | MS.gene067900:CDS | 50.0% | |
| ! | TTGGTGGGTATGCTCAAGCT+GGG | + | chr8.2:31954635-31954654 | MS.gene067900:CDS | 50.0% |
| ! | TTTGATTTCCCCCACCCCAA+CGG | - | chr8.2:31955665-31955684 | None:intergenic | 50.0% |
| !! | ATGACAAAGGTGTCGATGCC+TGG | - | chr8.2:31955135-31955154 | None:intergenic | 50.0% |
| CAAGGAAGGGAAGCTTGTGG+AGG | + | chr8.2:31954543-31954562 | MS.gene067900:CDS | 55.0% | |
| GAGAGGTCAAGCAAGGGGTT+CGG | + | chr8.2:31955076-31955095 | MS.gene067900:CDS | 55.0% | |
| GGGGATTGAGCCGGATATTG+TGG | + | chr8.2:31954597-31954616 | MS.gene067900:CDS | 55.0% | |
| GTGCAAGGAAGGGAAGCTTG+TGG | + | chr8.2:31954540-31954559 | MS.gene067900:CDS | 55.0% | |
| GTTGGGAGAGGTCAAGCAAG+GGG | + | chr8.2:31955071-31955090 | MS.gene067900:CDS | 55.0% | |
| TCAAGCAAGGGGTTCGGCTT+TGG | + | chr8.2:31955082-31955101 | MS.gene067900:CDS | 55.0% | |
| TTGAATCGTTGCGGCGATGC+CGG | + | chr8.2:31954112-31954131 | MS.gene067900:CDS | 55.0% | |
| ! | CTTGGTGGGTATGCTCAAGC+TGG | + | chr8.2:31954634-31954653 | MS.gene067900:CDS | 55.0% |
| !! | GTTGGCTTGCAAGTTGGGAG+AGG | + | chr8.2:31955059-31955078 | MS.gene067900:CDS | 55.0% |
| !!! | GGAAGCAGCGTCGCTTTTTG+AGG | + | chr8.2:31954459-31954478 | MS.gene067900:CDS | 55.0% |
| AGGGCTAGACAACGCCGTTG+GGG | + | chr8.2:31955648-31955667 | MS.gene067900:CDS | 60.0% | |
| CTAGACAACGCCGTTGGGGT+GGG | + | chr8.2:31955652-31955671 | MS.gene067900:CDS | 60.0% | |
| GAAGGATGCGGGGATTGAGC+CGG | + | chr8.2:31954588-31954607 | MS.gene067900:CDS | 60.0% | |
| GAGGGCTAGACAACGCCGTT+GGG | + | chr8.2:31955647-31955666 | MS.gene067900:CDS | 60.0% | |
| TAGACAACGCCGTTGGGGTG+GGG | + | chr8.2:31955653-31955672 | MS.gene067900:CDS | 60.0% | |
| AGACAACGCCGTTGGGGTGG+GGG | + | chr8.2:31955654-31955673 | MS.gene067900:CDS | 65.0% | |
| GCTAGACAACGCCGTTGGGG+TGG | + | chr8.2:31955651-31955670 | MS.gene067900:CDS | 65.0% | |
| GGAGGGCTAGACAACGCCGT+TGG | + | chr8.2:31955646-31955665 | MS.gene067900:CDS | 65.0% | |
| ! | GAAGCGAGTGGGCTCAGTCC+AGG | + | chr8.2:31955114-31955133 | MS.gene067900:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.2 | gene | 31954090 | 31955695 | 31954090 | ID=MS.gene067900 |
| chr8.2 | mRNA | 31954090 | 31955695 | 31954090 | ID=MS.gene067900.t1;Parent=MS.gene067900 |
| chr8.2 | exon | 31954090 | 31955695 | 31954090 | ID=MS.gene067900.t1.exon1;Parent=MS.gene067900.t1 |
| chr8.2 | CDS | 31954090 | 31955695 | 31954090 | ID=cds.MS.gene067900.t1;Parent=MS.gene067900.t1 |
| Gene Sequence |
| Protein sequence |
