AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene068107

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene068107.t1 MTR_8g069575 96.837 411 13 0 1 411 1 411 0.0 840
MS.gene068107.t1 MTR_5g033650 77.747 364 79 2 49 411 4 366 0.0 593
MS.gene068107.t1 MTR_3g077430 69.452 383 114 3 30 411 85 465 0.0 574
MS.gene068107.t1 MTR_8g069610 64.251 414 145 1 1 411 1 414 0.0 560
MS.gene068107.t1 MTR_4g105400 71.920 349 95 2 65 411 11 358 0.0 543
MS.gene068107.t1 MTR_8g069600 63.070 417 124 3 1 411 1 393 0.0 534
MS.gene068107.t1 MTR_3g095890 62.892 415 137 6 1 410 31 433 0.0 525
MS.gene068107.t1 MTR_8g069720 58.273 417 158 6 1 411 1 407 2.31e-178 503
MS.gene068107.t1 MTR_8g069580 58.473 419 141 8 1 411 1 394 1.27e-169 480
MS.gene068107.t1 MTR_7g116420 57.513 386 140 4 49 410 54 439 2.44e-163 466
MS.gene068107.t1 MTR_8g069640 55.556 414 170 4 1 410 1 404 2.37e-162 462
MS.gene068107.t1 MTR_8g069660 55.181 415 167 6 1 411 1 400 2.95e-160 457
MS.gene068107.t1 MTR_1g079730 51.584 442 180 6 3 411 11 451 5.49e-159 456
MS.gene068107.t1 MTR_8g088510 53.444 421 166 6 8 410 7 415 8.69e-159 454
MS.gene068107.t1 MTR_2g062610 53.886 386 157 3 46 411 42 426 1.57e-155 446
MS.gene068107.t1 MTR_8g069590 63.844 307 108 3 106 411 1 305 2.55e-143 410
MS.gene068107.t1 MTR_8g069715 50.839 417 173 6 1 411 20 410 7.99e-142 410
MS.gene068107.t1 MTR_2g062610 57.468 308 120 2 114 411 30 336 7.06e-136 392
MS.gene068107.t1 MTR_2g062610 57.468 308 120 2 114 411 37 343 1.06e-135 392
MS.gene068107.t1 MTR_2g073040 64.074 270 90 3 20 286 4 269 7.54e-123 357
MS.gene068107.t1 MTR_2g073020 60.777 283 100 4 11 286 4 282 8.52e-118 344
MS.gene068107.t1 MTR_2g093840 57.321 321 121 8 95 411 52 360 1.75e-115 342
MS.gene068107.t1 MTR_6g012620 41.117 394 191 10 49 411 27 410 4.12e-97 296
MS.gene068107.t1 MTR_3g103980 37.413 433 231 11 3 411 19 435 1.70e-89 278
MS.gene068107.t1 MTR_3g104000 38.636 396 215 7 42 411 24 417 1.76e-89 277
MS.gene068107.t1 MTR_3g104030 39.844 384 205 8 45 407 32 410 2.19e-89 276
MS.gene068107.t1 MTR_3g104070 37.002 427 225 11 7 406 7 416 3.28e-88 274
MS.gene068107.t1 MTR_8g069695 48.800 250 123 3 164 411 13 259 6.19e-83 254
MS.gene068107.t1 MTR_1g016910 34.803 431 240 8 9 411 3 420 1.10e-76 244
MS.gene068107.t1 MTR_3g104030 39.564 321 161 7 113 407 33 346 1.17e-70 226
MS.gene068107.t1 MTR_5g078580 33.933 389 225 12 7 388 4 367 1.10e-55 189
MS.gene068107.t1 MTR_8g040850 31.807 415 244 12 7 407 1 390 4.47e-54 184
MS.gene068107.t1 MTR_8g069630 63.077 130 46 2 283 411 1 129 7.68e-53 172
MS.gene068107.t1 MTR_8g040890 30.769 429 251 12 12 405 1 418 4.04e-51 177
MS.gene068107.t1 MTR_8g069750 60.714 112 44 0 219 330 151 262 1.67e-44 156
MS.gene068107.t1 MTR_5g092260 28.224 411 255 13 3 407 8 384 1.61e-41 151
MS.gene068107.t1 MTR_5g094280 34.164 281 161 9 39 314 17 278 2.96e-41 149
MS.gene068107.t1 MTR_3g108680 29.330 358 225 13 58 407 49 386 1.02e-39 146
MS.gene068107.t1 MTR_2g046390 30.618 356 210 11 63 405 37 368 5.72e-39 144
MS.gene068107.t1 MTR_8g012985 37.500 240 134 9 176 405 4 237 5.97e-38 137
MS.gene068107.t1 MTR_8g104480 30.423 355 199 14 73 405 9 337 8.64e-38 140
MS.gene068107.t1 MTR_2g046520 34.979 243 143 9 175 407 3 240 9.27e-34 126
MS.gene068107.t1 MTR_2g046430 34.979 243 143 9 175 407 3 240 3.34e-33 125
MS.gene068107.t1 MTR_8g069665 56.481 108 45 2 44 150 86 192 6.36e-33 123
MS.gene068107.t1 MTR_2g046300 28.804 368 186 14 63 405 37 353 4.57e-30 119
MS.gene068107.t1 MTR_2g073050 71.831 71 19 1 341 411 1 70 2.85e-29 108
MS.gene068107.t1 MTR_5g065260 32.766 235 143 7 176 405 2 226 1.65e-28 112
MS.gene068107.t1 MTR_8g069950 80.000 55 11 0 238 292 58 112 1.37e-23 95.1
MS.gene068107.t1 MTR_0009s0020 36.957 138 81 4 220 357 18 149 4.84e-22 92.0
MS.gene068107.t1 MTR_7g072230 32.571 175 106 6 238 403 34 205 1.96e-21 92.0
MS.gene068107.t1 MTR_2g046390 24.859 354 190 12 63 405 37 325 3.37e-19 88.2
MS.gene068107.t1 MTR_8g069585 53.425 73 30 2 11 80 6 77 3.90e-17 77.4
MS.gene068107.t1 MTR_5g065920 55.357 56 23 1 165 220 9 62 1.12e-15 72.0
MS.gene068107.t1 MTR_8g064210 48.052 77 36 2 2 74 15 91 2.41e-12 67.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene068107.t1 AT1G10750 73.822 382 99 1 30 411 87 467 0.0 612
MS.gene068107.t1 AT1G23340 67.805 410 130 2 3 411 1 409 0.0 589
MS.gene068107.t1 AT1G23340 67.805 410 130 2 3 411 1 409 0.0 589
MS.gene068107.t1 AT1G70550 70.712 379 110 1 33 411 88 465 0.0 582
MS.gene068107.t1 AT5G50150 69.634 382 113 3 32 411 40 420 0.0 569
MS.gene068107.t1 AT1G55360 55.959 386 151 5 44 411 38 422 7.98e-159 454
MS.gene068107.t1 AT3G13510 52.745 419 167 7 10 411 15 419 2.55e-158 452
MS.gene068107.t1 AT5G18460 55.990 384 143 5 49 410 50 429 2.96e-157 451
MS.gene068107.t1 AT5G56530 52.471 425 158 8 10 410 15 419 5.02e-153 439
MS.gene068107.t1 AT5G56530 52.471 425 158 8 10 410 15 419 5.02e-153 439
MS.gene068107.t1 AT2G44210 51.313 419 174 7 13 411 7 415 1.92e-149 430
MS.gene068107.t1 AT2G44210 48.107 449 173 8 13 411 7 445 1.55e-143 416
MS.gene068107.t1 AT1G23340 65.965 285 95 2 3 286 1 284 2.12e-136 392
MS.gene068107.t1 AT2G44220 47.816 412 186 9 14 411 7 403 2.94e-133 388
MS.gene068107.t1 AT2G44240 49.211 380 182 7 40 411 26 402 2.03e-123 363
MS.gene068107.t1 AT3G48230 48.000 375 183 8 45 411 3 373 3.74e-113 336
MS.gene068107.t1 AT2G17750 41.606 411 213 10 10 410 2 395 9.18e-113 336
MS.gene068107.t1 AT2G44250 44.903 412 205 11 11 410 7 408 1.52e-109 328
MS.gene068107.t1 AT2G19360 41.763 431 206 10 10 410 10 425 3.47e-108 325
MS.gene068107.t1 AT5G19170 45.787 356 169 7 61 405 23 365 4.20e-104 313
MS.gene068107.t1 AT1G70550 69.268 205 62 1 33 237 88 291 1.44e-102 306
MS.gene068107.t1 AT1G10750 61.404 228 86 2 30 256 87 313 4.34e-95 289
MS.gene068107.t1 AT2G44250 48.534 307 145 7 114 410 22 325 2.29e-88 271
MS.gene068107.t1 AT5G25950 36.842 437 229 9 5 411 13 432 1.53e-81 257
MS.gene068107.t1 AT5G25960 37.500 408 196 8 12 411 1 357 6.22e-74 235
MS.gene068107.t1 AT2G20170 36.983 411 221 15 10 405 9 396 3.79e-73 234
MS.gene068107.t1 AT2G20170 36.983 411 221 15 10 405 9 396 3.79e-73 234
MS.gene068107.t1 AT4G23370 35.013 377 220 12 46 405 33 401 6.33e-66 216
MS.gene068107.t1 AT4G23390 36.957 368 206 13 53 405 41 397 1.94e-65 214
MS.gene068107.t1 AT2G20170 34.793 411 213 15 10 405 9 379 2.34e-64 211
MS.gene068107.t1 AT4G23380 33.090 411 242 13 9 405 7 398 1.38e-62 207
MS.gene068107.t1 AT4G23365 32.258 372 231 11 46 405 36 398 4.52e-59 198
MS.gene068107.t1 AT4G23350 31.720 372 235 9 46 405 36 400 4.70e-59 198
MS.gene068107.t1 AT4G23355 32.267 375 227 11 46 405 36 398 2.89e-57 193
MS.gene068107.t1 AT4G23360 32.626 377 224 12 46 405 36 399 5.40e-56 190
MS.gene068107.t1 AT2G35250 33.724 341 198 9 70 407 24 339 2.25e-51 176
MS.gene068107.t1 AT1G10190 31.159 414 240 20 15 405 3 394 8.69e-45 160
MS.gene068107.t1 AT4G17505 30.141 355 193 13 61 411 18 321 1.15e-44 157
MS.gene068107.t1 AT4G15050 30.504 377 222 17 49 405 38 394 6.24e-41 149
MS.gene068107.t1 AT2G27320 33.663 303 170 9 72 370 30 305 9.98e-40 144
MS.gene068107.t1 AT2G24950 28.993 407 248 17 14 405 29 409 1.91e-38 143
MS.gene068107.t1 AT4G15053 29.535 430 249 20 1 405 1 401 8.64e-37 139
MS.gene068107.t1 AT4G10220 27.446 419 255 15 6 405 10 398 4.44e-36 137
MS.gene068107.t1 AT4G23373 34.263 251 133 9 9 258 6 225 6.06e-34 129
MS.gene068107.t1 AT5G05030 29.167 360 224 12 57 407 22 359 3.03e-33 128
MS.gene068107.t1 AT5G46810 28.000 350 224 11 73 405 11 349 4.44e-33 127
MS.gene068107.t1 AT5G46820 28.169 355 227 12 64 405 8 347 6.09e-32 124
MS.gene068107.t1 AT5G25410 27.500 360 226 13 57 405 28 363 4.65e-31 122
MS.gene068107.t1 AT4G10210 27.053 414 246 16 1 390 5 386 2.26e-29 118
MS.gene068107.t1 AT5G60380 28.571 343 216 13 73 405 44 367 3.56e-29 117
MS.gene068107.t1 AT2G38255 33.175 211 105 6 73 275 14 196 2.83e-28 111
MS.gene068107.t1 AT5G46200 26.753 385 220 15 73 405 31 405 4.60e-28 114
MS.gene068107.t1 AT4G23080 28.037 428 251 21 6 407 10 406 1.36e-26 110
MS.gene068107.t1 AT5G11660 31.058 293 180 11 123 407 26 304 4.27e-26 107
MS.gene068107.t1 AT4G17860 28.977 352 202 17 73 405 29 351 9.68e-26 107
MS.gene068107.t1 AT5G25415 32.787 244 143 8 175 407 99 332 2.25e-24 103
MS.gene068107.t1 AT2G03930 52.577 97 43 3 160 253 38 134 3.31e-23 95.9
MS.gene068107.t1 AT5G36680 28.053 303 182 12 122 410 51 331 1.03e-22 98.6
MS.gene068107.t1 AT5G36770 28.053 303 182 12 122 410 51 331 1.03e-22 98.6
MS.gene068107.t1 AT5G04937 29.442 197 112 8 216 405 22 198 6.80e-17 79.3
MS.gene068107.t1 AT5G37520 28.017 232 126 11 181 406 2 198 3.91e-15 73.9

Find 111 sgRNAs with CRISPR-Local

Find 258 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACCCTAGATTCTTCACTTAT+TGG 0.171239 8.4:+34084867 MS.gene068107:CDS
ATCCCTATTCACACACTTAA+AGG 0.182178 8.4:+34086700 MS.gene068107:CDS
TCTTGTATATTATAACAATT+TGG 0.235227 8.4:-34086920 None:intergenic
ATGAAGAGTTTCACAAGTTT+AGG 0.287405 8.4:+34082602 MS.gene068107:CDS
TCTCCAACTTCTACATATAA+TGG 0.288121 8.4:+34085116 MS.gene068107:CDS
AATTCAGCTTGTCTCAAATA+TGG 0.288451 8.4:+34084284 MS.gene068107:CDS
CCCATTTGCTTATGCTCTCT+TGG 0.302334 8.4:-34082982 None:intergenic
ATACAAGAAGGAACTAATAA+TGG 0.313088 8.4:+34086935 MS.gene068107:CDS
TTGGTAGAAAAGTTTGATTT+TGG 0.315468 8.4:-34082579 None:intergenic
CAAAATGTCCACTACCCATT+TGG 0.328159 8.4:-34086793 None:intergenic
AGCCACCAATTCCCATGCTT+TGG 0.330284 8.4:-34086638 None:intergenic
TTCCTTTAAGTGTGTGAATA+GGG 0.332268 8.4:-34086702 None:intergenic
GGGAATTGGTGGCTTGAATA+TGG 0.338331 8.4:+34086647 MS.gene068107:CDS
TGGATCATCTCTGGTTCATT+TGG 0.338622 8.4:+34084304 MS.gene068107:CDS
TTTCCTTTAAGTGTGTGAAT+AGG 0.341512 8.4:-34086703 None:intergenic
CTAATCGGAATTGTTCCTTC+TGG 0.344077 8.4:-34083054 None:intergenic
GCTTGCTCTATTAACACATT+TGG 0.344553 8.4:+34083105 MS.gene068107:CDS
AGTGCAACAATGGTTCAATT+TGG 0.344622 8.4:+34086725 MS.gene068107:CDS
AAACAAGGAGAAGAAAATAA+AGG 0.350929 8.4:-34082519 None:intergenic
TTAGCTACAACATTGAGATT+TGG 0.370876 8.4:-34086893 None:intergenic
TGCTACAATTTACTTTGCTC+TGG 0.378764 8.4:+34085050 MS.gene068107:CDS
GTCCAATAAGTGAAGAATCT+AGG 0.380593 8.4:-34084869 None:intergenic
GTCTCACACTTCTACCCAAA+TGG 0.386568 8.4:+34086778 MS.gene068107:CDS
ACTAGCAGTAATATTGCAAT+TGG 0.395249 8.4:+34085083 MS.gene068107:CDS
TTGATATTAGCTTAATGATC+TGG 0.397300 8.4:+34085147 MS.gene068107:CDS
ACTGATGCATATCAAGGAAC+TGG 0.402596 8.4:+34085026 MS.gene068107:CDS
AACTTGTGAAACTCTTCATT+TGG 0.403131 8.4:-34082598 None:intergenic
ATAGTGAATACAATGTCAAC+AGG 0.406411 8.4:+34086755 MS.gene068107:CDS
CAGGTCAGCCCAGAGCTCTA+TGG 0.408690 8.4:+34084836 MS.gene068107:intron
TATGGATCTGGAAACTTGAT+TGG 0.410366 8.4:+34086665 MS.gene068107:CDS
TCATTAAGCTAATATCAAAT+TGG 0.410645 8.4:-34085142 None:intergenic
CTGGAAACTTGATTGGGTAT+TGG 0.411401 8.4:+34086672 MS.gene068107:CDS
TTTCAATTGTGGAGTTTCTC+AGG 0.412909 8.4:+34083021 MS.gene068107:CDS
AAAATGTCCACTACCCATTT+GGG 0.415939 8.4:-34086792 None:intergenic
TGAGACAAGCTGAATTCATA+TGG 0.421304 8.4:-34084277 None:intergenic
AAAGGAGGAGGGAGATGACT+GGG 0.428087 8.4:-34082501 None:intergenic
ACCAAGAGAGCATAAGCAAA+TGG 0.428963 8.4:+34082981 MS.gene068107:CDS
CATATGGACTTTCCACTTGT+GGG 0.431251 8.4:-34084261 None:intergenic
GCCTGCTGTTAAGACAATTC+AGG 0.432132 8.4:+34082660 MS.gene068107:CDS
AAAATTGAAACGTGTGAGAA+TGG 0.438872 8.4:+34083131 MS.gene068107:CDS
TACAAGAAGGAACTAATAAT+GGG 0.448624 8.4:+34086936 MS.gene068107:CDS
TAAAGGAGGAGGGAGATGAC+TGG 0.452466 8.4:-34082502 None:intergenic
TAGCTATCCCCATAGAGCTC+TGG 0.454983 8.4:-34084845 None:intergenic
GGAGAAGAAAATAAAGGAGG+AGG 0.457366 8.4:-34082513 None:intergenic
TTTATTATGGTGGTCCTGGC+AGG 0.459542 8.4:+34086972 MS.gene068107:CDS
TACCATTGAAGCTGGTTGGC+AGG 0.466050 8.4:+34084339 MS.gene068107:CDS
CCTCCATTATATGTAGAAGT+TGG 0.467832 8.4:-34085119 None:intergenic
AGCTATCCCCATAGAGCTCT+GGG 0.473291 8.4:-34084844 None:intergenic
TGGTGGCTTGAATATGGATC+TGG 0.475485 8.4:+34086653 MS.gene068107:CDS
AGGATCCAAAGCATGGGAAT+TGG 0.479599 8.4:+34086633 MS.gene068107:intron
TGCCTGCCAACCAGCTTCAA+TGG 0.481927 8.4:-34084341 None:intergenic
AGGTCAGCCCAGAGCTCTAT+GGG 0.482474 8.4:+34084837 MS.gene068107:intron
GCAACAATGGTTCAATTTGG+TGG 0.483730 8.4:+34086728 MS.gene068107:CDS
ACCTGAATTGTCTTAACAGC+AGG 0.484466 8.4:-34082661 None:intergenic
GTGAGTGGGAATGAGTACTA+TGG 0.487457 8.4:+34084211 MS.gene068107:CDS
AAAATTATAACTTTCAATTG+TGG 0.487536 8.4:+34083010 MS.gene068107:CDS
TCTCAAATATGGATCATCTC+TGG 0.501761 8.4:+34084295 MS.gene068107:CDS
CTTTAGAAATATGCAAGTTG+TGG 0.502120 8.4:+34086844 MS.gene068107:CDS
TCCAATAAGTGAAGAATCTA+GGG 0.502742 8.4:-34084868 None:intergenic
CCAAGAGAGCATAAGCAAAT+GGG 0.509356 8.4:+34082982 MS.gene068107:CDS
TTATGCTCTCTTGGTCTCTC+CGG 0.511099 8.4:-34082973 None:intergenic
TCATATGGACTTTCCACTTG+TGG 0.512196 8.4:-34084262 None:intergenic
GAGAAGAAAATAAAGGAGGA+GGG 0.526498 8.4:-34082512 None:intergenic
TCTCACACTTCTACCCAAAT+GGG 0.527784 8.4:+34086779 MS.gene068107:CDS
ATCCAAAGCATGGGAATTGG+TGG 0.528426 8.4:+34086636 MS.gene068107:CDS
ATGGATCTGGAAACTTGATT+GGG 0.531742 8.4:+34086666 MS.gene068107:CDS
AACATAGGATGGTCAAAAGC+TGG 0.536748 8.4:-34082821 None:intergenic
TTGCAGACTGATGCATATCA+AGG 0.537288 8.4:+34085020 MS.gene068107:intron
TTTATGTGTATAGGATCCTC+CGG 0.539657 8.4:+34082954 MS.gene068107:intron
CAAGGAGAAGAAAATAAAGG+AGG 0.541972 8.4:-34082516 None:intergenic
AAGAGTTTCACAAGTTTAGG+AGG 0.546074 8.4:+34082605 MS.gene068107:CDS
GAAGGAACTAATAATGGGTG+GGG 0.546366 8.4:+34086941 MS.gene068107:CDS
TTGTACCTCATGTCCATCGC+CGG 0.547979 8.4:-34083160 None:intergenic
GATCTCAATACCATTGAAGC+TGG 0.548557 8.4:+34084331 MS.gene068107:CDS
TCAATACCATTGAAGCTGGT+TGG 0.549014 8.4:+34084335 MS.gene068107:CDS
TTTGTCCTCTCAACATAGGA+TGG 0.550432 8.4:-34082832 None:intergenic
CAGTCTATGATATCACCATC+AGG 0.554468 8.4:-34082779 None:intergenic
AGAAGGAACTAATAATGGGT+GGG 0.554565 8.4:+34086940 MS.gene068107:CDS
AGAATGGACACCACCGGCGA+TGG 0.558764 8.4:+34083147 MS.gene068107:CDS
TACAACATTGAGATTTGGCA+AGG 0.560466 8.4:-34086888 None:intergenic
TGCGTGTAGGATCCAAAGCA+TGG 0.565093 8.4:+34086626 MS.gene068107:intron
AAATGTGTGGGTCCCACAAG+TGG 0.566747 8.4:+34084249 MS.gene068107:CDS
GTATATTATAACAATTTGGA+CGG 0.567975 8.4:-34086916 None:intergenic
TAGATTCTTCACTTATTGGA+CGG 0.568545 8.4:+34084871 MS.gene068107:CDS
ACTTCTACCCAAATGGGTAG+TGG 0.571003 8.4:+34086785 MS.gene068107:CDS
AATGATGCACAGCATGCAGT+TGG 0.572287 8.4:+34084184 MS.gene068107:intron
CTTAAAGGAAAGTGCAACAA+TGG 0.577005 8.4:+34086715 MS.gene068107:CDS
TGCTCTCTTGGTCTCTCCGG+AGG 0.583271 8.4:-34082970 None:intergenic
CCGATTAGAAGAATAAAAGA+AGG 0.583646 8.4:+34083069 MS.gene068107:CDS
CAAAAGCTAGCATAAATGTG+TGG 0.585357 8.4:+34084236 MS.gene068107:CDS
AATTGTTATAATATACAAGA+AGG 0.590507 8.4:+34086923 MS.gene068107:CDS
TTTGACCATCCTATGTTGAG+AGG 0.592755 8.4:+34082827 MS.gene068107:CDS
GTTTATTCTTCAGAAACAAG+TGG 0.596638 8.4:+34082556 MS.gene068107:CDS
CACCACCGGCGATGGACATG+AGG 0.599402 8.4:+34083155 MS.gene068107:CDS
CTGATGCATATCAAGGAACT+GGG 0.602205 8.4:+34085027 MS.gene068107:CDS
AAGAAGGAACTAATAATGGG+TGG 0.603081 8.4:+34086939 MS.gene068107:CDS
AAGTGTGTGAATAGGGATGA+TGG 0.604788 8.4:-34086695 None:intergenic
TACCTCATGTCCATCGCCGG+TGG 0.612456 8.4:-34083157 None:intergenic
AAAAGCTAGCATAAATGTGT+GGG 0.619969 8.4:+34084237 MS.gene068107:CDS
TATTAGCTTAATGATCTGGA+AGG 0.620476 8.4:+34085151 MS.gene068107:CDS
CATGACAAACCAAAGAAACA+AGG 0.620517 8.4:-34082534 None:intergenic
TCAGGTGAATCATGTCCAGA+AGG 0.626410 8.4:+34083039 MS.gene068107:CDS
GCGTGTAGGATCCAAAGCAT+GGG 0.628244 8.4:+34086627 MS.gene068107:intron
ACAACATTGAGATTTGGCAA+GGG 0.654257 8.4:-34086887 None:intergenic
AAGGAGGAGGGAGATGACTG+GGG 0.658931 8.4:-34082500 None:intergenic
CCAACTTCTACATATAATGG+AGG 0.662547 8.4:+34085119 MS.gene068107:CDS
ATGCAGTTGGATATGTGAGT+GGG 0.674700 8.4:+34084197 MS.gene068107:CDS
CATGCAGTTGGATATGTGAG+TGG 0.677188 8.4:+34084196 MS.gene068107:CDS
CGTGTGAGAATGGACACCAC+CGG 0.706037 8.4:+34083141 MS.gene068107:CDS
TAGTGAATACAATGTCAACA+GGG 0.716345 8.4:+34086756 MS.gene068107:CDS
GGTCAGCCCAGAGCTCTATG+GGG 0.745363 8.4:+34084838 MS.gene068107:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAATATGATAAATTATG+TGG - chr8.4:34086091-34086110 None:intergenic 10.0%
!! TGTATTTAAAAAAATGATAA+TGG + chr8.4:34084987-34085006 MS.gene068107:intron 10.0%
!!! AAATGATTTTTTTTTTTTGA+AGG + chr8.4:34084613-34084632 MS.gene068107:intron 10.0%
!!! TCTTTTGAAATAATTAATAT+CGG + chr8.4:34083705-34083724 MS.gene068107:intron 10.0%
!!! TCTTTTTTAAACTATTAAAA+AGG + chr8.4:34086500-34086519 MS.gene068107:intron 10.0%
!!! TTTTATCAGAATATTATTTT+TGG - chr8.4:34083915-34083934 None:intergenic 10.0%
!! AAAAATGAAGGAATAAAAAA+AGG - chr8.4:34086204-34086223 None:intergenic 15.0%
!! AAAATTATAACTTTCAATTG+TGG + chr8.4:34083010-34083029 MS.gene068107:CDS 15.0%
!! AAAGAAAATATAGACAAAAA+TGG - chr8.4:34083502-34083521 None:intergenic 15.0%
!! AAATTGATTATAAATGTGAT+CGG - chr8.4:34085270-34085289 None:intergenic 15.0%
!! AATTGTTATAATATACAAGA+AGG + chr8.4:34086923-34086942 MS.gene068107:CDS 15.0%
!! ATTATTTCAAAAGAAATGAA+TGG - chr8.4:34083699-34083718 None:intergenic 15.0%
!! ATTTATATTAGATTCAATGT+TGG - chr8.4:34084115-34084134 None:intergenic 15.0%
!! CTATTGAAGATAAAAATAAT+TGG - chr8.4:34084068-34084087 None:intergenic 15.0%
!! TATTTCAACTTATAATTGTT+CGG + chr8.4:34082930-34082949 MS.gene068107:intron 15.0%
!! TCTTGTATATTATAACAATT+TGG - chr8.4:34086923-34086942 None:intergenic 15.0%
!! TGAAAAAAAGAAACAAAAAA+GGG - chr8.4:34086068-34086087 None:intergenic 15.0%
!! TTAAAAATTGTTTATAAACG+TGG + chr8.4:34085372-34085391 MS.gene068107:intron 15.0%
!!! AAAGTATCATTATTAAGTAT+TGG - chr8.4:34084588-34084607 None:intergenic 15.0%
!!! AATATTTTGTAACAAATCAA+TGG - chr8.4:34085648-34085667 None:intergenic 15.0%
!!! ATTTTTCGTTAAATATGTTT+TGG + chr8.4:34083398-34083417 MS.gene068107:intron 15.0%
!!! CAATGTTTTTAATTTTGTAT+TGG + chr8.4:34084782-34084801 MS.gene068107:intron 15.0%
!!! TTTTATGTTTCTTTTCATTA+TGG + chr8.4:34083246-34083265 MS.gene068107:intron 15.0%
!!! TTTTCACATTCATTAAATAA+CGG - chr8.4:34085351-34085370 None:intergenic 15.0%
!!! TTTTTTTGAAGGAATAAATT+TGG + chr8.4:34084624-34084643 MS.gene068107:intron 15.0%
!! AAAAACATTGATGAAAATGA+AGG - chr8.4:34084772-34084791 None:intergenic 20.0%
!! AAAAAGAAAAAGAAGACATT+TGG - chr8.4:34083747-34083766 None:intergenic 20.0%
!! AAAACATTGATGAAAATGAA+GGG - chr8.4:34084771-34084790 None:intergenic 20.0%
!! AAAACTAAGAAAAATACCAA+TGG - chr8.4:34082860-34082879 None:intergenic 20.0%
!! AACTTAACATAGATAGATAA+TGG + chr8.4:34083314-34083333 MS.gene068107:intron 20.0%
!! ACGAAAATTCTTAAATTGAT+TGG + chr8.4:34084701-34084720 MS.gene068107:intron 20.0%
!! AGTAAAATACGCAAAATATT+AGG - chr8.4:34086244-34086263 None:intergenic 20.0%
!! ATTCTTAAATTGATTGGATT+TGG + chr8.4:34084707-34084726 MS.gene068107:intron 20.0%
!! GTAAAATACGCAAAATATTA+GGG - chr8.4:34086243-34086262 None:intergenic 20.0%
!! GTATATTATAACAATTTGGA+CGG - chr8.4:34086919-34086938 None:intergenic 20.0%
!! GTGAAAAAAAGAAACAAAAA+AGG - chr8.4:34086069-34086088 None:intergenic 20.0%
!! GTTAAATAAGAGAAAAATGA+AGG - chr8.4:34086216-34086235 None:intergenic 20.0%
!! TCATTAAGCTAATATCAAAT+TGG - chr8.4:34085145-34085164 None:intergenic 20.0%
!!! AAATCAATGGTTAGTTAATT+TGG - chr8.4:34085635-34085654 None:intergenic 20.0%
!!! AAATGGTCAAATTTCTTTTA+CGG - chr8.4:34083485-34083504 None:intergenic 20.0%
!!! AATAATCTCATTGACTAAAT+TGG - chr8.4:34085542-34085561 None:intergenic 20.0%
!!! AGTTTAAGTAATTTTTATGC+AGG + chr8.4:34084817-34084836 MS.gene068107:intron 20.0%
!!! ATAAAGTACTAACAACAAAT+TGG + chr8.4:34084153-34084172 MS.gene068107:intron 20.0%
!!! ATCTATGTTAAGTTGTTTTT+TGG - chr8.4:34083308-34083327 None:intergenic 20.0%
!!! TATATGGTAGTATTTTTTGA+GGG + chr8.4:34083349-34083368 MS.gene068107:intron 20.0%
!!! TCTATGTTAAGTTGTTTTTT+GGG - chr8.4:34083307-34083326 None:intergenic 20.0%
!!! TTTTGGCTCATATAAAATTA+CGG + chr8.4:34083415-34083434 MS.gene068107:intron 20.0%
! AAACAAGGAGAAGAAAATAA+AGG - chr8.4:34082522-34082541 None:intergenic 25.0%
! AAATTACCCATAATCTTCTA+AGG - chr8.4:34085205-34085224 None:intergenic 25.0%
! AACATAAATGACACACAAAA+GGG + chr8.4:34085866-34085885 MS.gene068107:intron 25.0%
! AAGGAATAAATTTGGAAAGA+AGG + chr8.4:34084632-34084651 MS.gene068107:intron 25.0%
! AAGTAAATTGATTGAAGCAA+GGG + chr8.4:34084895-34084914 MS.gene068107:intron 25.0%
! AGGAATAAATTTGGAAAGAA+GGG + chr8.4:34084633-34084652 MS.gene068107:intron 25.0%
! AGTAGTAAAGTGAGTAAATA+TGG - chr8.4:34085949-34085968 None:intergenic 25.0%
! AGTCAAAAAGAAGAAAACAA+AGG - chr8.4:34086280-34086299 None:intergenic 25.0%
! ATACAAGAAGGAACTAATAA+TGG + chr8.4:34086935-34086954 MS.gene068107:CDS 25.0%
! ATGGAAATTGGTAAAGTATA+TGG + chr8.4:34083333-34083352 MS.gene068107:intron 25.0%
! ATTGAAAATAAGTACTCCAT+CGG - chr8.4:34085399-34085418 None:intergenic 25.0%
! ATTTACTCACTTTACTACTT+TGG + chr8.4:34085950-34085969 MS.gene068107:intron 25.0%
! GTTCAAATGTTAGTGAATTT+AGG + chr8.4:34085921-34085940 MS.gene068107:intron 25.0%
! TAAGTAAATTGATTGAAGCA+AGG + chr8.4:34084894-34084913 MS.gene068107:intron 25.0%
! TACAAGAAGGAACTAATAAT+GGG + chr8.4:34086936-34086955 MS.gene068107:CDS 25.0%
! TCACTTCTCAGTTTATTAAT+AGG + chr8.4:34084038-34084057 MS.gene068107:intron 25.0%
! TGACCACTTTAAATTGAAAA+AGG - chr8.4:34084001-34084020 None:intergenic 25.0%
! TTAGAAGATTATGGGTAATT+TGG + chr8.4:34085204-34085223 MS.gene068107:intron 25.0%
!! CCTTCTTTTATTCTTCTAAT+CGG - chr8.4:34083072-34083091 None:intergenic 25.0%
!! CTTTTCATTATGGTAAAGTA+TGG + chr8.4:34083256-34083275 MS.gene068107:intron 25.0%
!! GAAAGAGATAAAAAGCATAA+GGG - chr8.4:34086015-34086034 None:intergenic 25.0%
!! TGAAAGAGATAAAAAGCATA+AGG - chr8.4:34086016-34086035 None:intergenic 25.0%
!! TTGATATTAGCTTAATGATC+TGG + chr8.4:34085147-34085166 MS.gene068107:CDS 25.0%
!!! AGTCCTTTTTCAATTTAAAG+TGG + chr8.4:34083995-34084014 MS.gene068107:intron 25.0%
!!! AGTTTTTTTTCTCTATTGAG+CGG + chr8.4:34082874-34082893 MS.gene068107:intron 25.0%
!!! ATATGGTAGTATTTTTTGAG+GGG + chr8.4:34083350-34083369 MS.gene068107:intron 25.0%
!!! CATAGATAGATAATGGAAAT+TGG + chr8.4:34083321-34083340 MS.gene068107:intron 25.0%
!!! GATTTGGTTTTGCATTAAAT+AGG + chr8.4:34084723-34084742 MS.gene068107:intron 25.0%
!!! GGAAATTACTTTTATTATGG+TGG + chr8.4:34086962-34086981 MS.gene068107:CDS 25.0%
!!! GTATATGGTAGTATTTTTTG+AGG + chr8.4:34083348-34083367 MS.gene068107:intron 25.0%
!!! TGGGGAAATTACTTTTATTA+TGG + chr8.4:34086959-34086978 MS.gene068107:CDS 25.0%
!!! TTGGTAGAAAAGTTTGATTT+TGG - chr8.4:34082582-34082601 None:intergenic 25.0%
AAAAGCTAGCATAAATGTGT+GGG + chr8.4:34084237-34084256 MS.gene068107:CDS 30.0%
AAAATTGAAACGTGTGAGAA+TGG + chr8.4:34083131-34083150 MS.gene068107:CDS 30.0%
AAAGTGACCTTAGAAGATTA+TGG + chr8.4:34085195-34085214 MS.gene068107:intron 30.0%
AACTTGTGAAACTCTTCATT+TGG - chr8.4:34082601-34082620 None:intergenic 30.0%
AAGTGACCTTAGAAGATTAT+GGG + chr8.4:34085196-34085215 MS.gene068107:intron 30.0%
AATTCAGCTTGTCTCAAATA+TGG + chr8.4:34084284-34084303 MS.gene068107:CDS 30.0%
ACATAAATGACACACAAAAG+GGG + chr8.4:34085867-34085886 MS.gene068107:intron 30.0%
ACTAGCAGTAATATTGCAAT+TGG + chr8.4:34085083-34085102 MS.gene068107:CDS 30.0%
AGTAAATACCAGTAGAAACT+TGG - chr8.4:34085241-34085260 None:intergenic 30.0%
ATAGTGAATACAATGTCAAC+AGG + chr8.4:34086755-34086774 MS.gene068107:CDS 30.0%
ATGAAGAGTTTCACAAGTTT+AGG + chr8.4:34082602-34082621 MS.gene068107:CDS 30.0%
CAACATAAATGACACACAAA+AGG + chr8.4:34085865-34085884 MS.gene068107:intron 30.0%
CCGATTAGAAGAATAAAAGA+AGG + chr8.4:34083069-34083088 MS.gene068107:CDS 30.0%
CTTCTCAGTTTATTAATAGG+TGG + chr8.4:34084041-34084060 MS.gene068107:intron 30.0%
CTTTAAGTCGTAAAAAGCAA+AGG - chr8.4:34086156-34086175 None:intergenic 30.0%
GAAAATTTAAGCTGAAAGTG+TGG + chr8.4:34085694-34085713 MS.gene068107:intron 30.0%
GTATCGTTGAAGATTTACTA+GGG + chr8.4:34086387-34086406 MS.gene068107:intron 30.0%
GTTTATTCTTCAGAAACAAG+TGG + chr8.4:34082556-34082575 MS.gene068107:CDS 30.0%
TAATGAGACTTCCAAACTAA+TGG - chr8.4:34085748-34085767 None:intergenic 30.0%
TAGAATTGTAGAAGAAGCAA+GGG + chr8.4:34085793-34085812 MS.gene068107:intron 30.0%
TAGATTCTTCACTTATTGGA+CGG + chr8.4:34084871-34084890 MS.gene068107:CDS 30.0%
TAGTGAATACAATGTCAACA+GGG + chr8.4:34086756-34086775 MS.gene068107:CDS 30.0%
TCCAATAAGTGAAGAATCTA+GGG - chr8.4:34084871-34084890 None:intergenic 30.0%
TCTCCAACTTCTACATATAA+TGG + chr8.4:34085116-34085135 MS.gene068107:CDS 30.0%
TGAAGGAATAAAAAAAGGTG+TGG - chr8.4:34086199-34086218 None:intergenic 30.0%
TGTATCGTTGAAGATTTACT+AGG + chr8.4:34086386-34086405 MS.gene068107:intron 30.0%
TGTATTAATGTGAGACTACA+AGG - chr8.4:34083865-34083884 None:intergenic 30.0%
TTAGCTACAACATTGAGATT+TGG - chr8.4:34086896-34086915 None:intergenic 30.0%
TTCCTTTAAGTGTGTGAATA+GGG - chr8.4:34086705-34086724 None:intergenic 30.0%
TTGAAAATAAGTACTCCATC+GGG - chr8.4:34085398-34085417 None:intergenic 30.0%
TTGATTATAAATGTGATCGG+AGG - chr8.4:34085267-34085286 None:intergenic 30.0%
TTTCCTTTAAGTGTGTGAAT+AGG - chr8.4:34086706-34086725 None:intergenic 30.0%
! AGACTAACTTTTCTTTTGGA+AGG - chr8.4:34083462-34083481 None:intergenic 30.0%
! CTTTAGAAATATGCAAGTTG+TGG + chr8.4:34086844-34086863 MS.gene068107:CDS 30.0%
! TATTAGCTTAATGATCTGGA+AGG + chr8.4:34085151-34085170 MS.gene068107:CDS 30.0%
!! ATAATCTTCTAAGGTCACTT+TGG - chr8.4:34085196-34085215 None:intergenic 30.0%
!! TTGTTCGGTTTTATGTGTAT+AGG + chr8.4:34082945-34082964 MS.gene068107:intron 30.0%
!! TTTTCTTCTCCTTGTTTCTT+TGG + chr8.4:34082525-34082544 MS.gene068107:CDS 30.0%
!!! TTGCACTGCTTTTTTTTAGT+AGG + chr8.4:34084423-34084442 MS.gene068107:intron 30.0%
AAAATGTCCACTACCCATTT+GGG - chr8.4:34086795-34086814 None:intergenic 35.0%
AAAGTGGTCACTGAATTTCA+TGG + chr8.4:34084011-34084030 MS.gene068107:intron 35.0%
AAATACCAGTAGAAACTTGG+AGG - chr8.4:34085238-34085257 None:intergenic 35.0%
AAGAGTTTCACAAGTTTAGG+AGG + chr8.4:34082605-34082624 MS.gene068107:CDS 35.0%
AATACCAGTAGAAACTTGGA+GGG - chr8.4:34085237-34085256 None:intergenic 35.0%
ACAACATTGAGATTTGGCAA+GGG - chr8.4:34086890-34086909 None:intergenic 35.0%
ACATACTTTAGTCCCTATGT+AGG - chr8.4:34083547-34083566 None:intergenic 35.0%
ACCCTAGATTCTTCACTTAT+TGG + chr8.4:34084867-34084886 MS.gene068107:CDS 35.0%
ACCGACAAGTAAAAAATGAG+TGG - chr8.4:34084454-34084473 None:intergenic 35.0%
AGTGCAACAATGGTTCAATT+TGG + chr8.4:34086725-34086744 MS.gene068107:CDS 35.0%
ATCCCTATTCACACACTTAA+AGG + chr8.4:34086700-34086719 MS.gene068107:CDS 35.0%
ATGGATCTGGAAACTTGATT+GGG + chr8.4:34086666-34086685 MS.gene068107:CDS 35.0%
ATTAATGTGAGACTACAAGG+AGG - chr8.4:34083862-34083881 None:intergenic 35.0%
CAAAAGCTAGCATAAATGTG+TGG + chr8.4:34084236-34084255 MS.gene068107:CDS 35.0%
CAAGGAGAAGAAAATAAAGG+AGG - chr8.4:34082519-34082538 None:intergenic 35.0%
CACAATGTTAGTGTTGTGTA+TGG + chr8.4:34086530-34086549 MS.gene068107:intron 35.0%
CATGACAAACCAAAGAAACA+AGG - chr8.4:34082537-34082556 None:intergenic 35.0%
CCAACTTCTACATATAATGG+AGG + chr8.4:34085119-34085138 MS.gene068107:CDS 35.0%
CCATAAAAATGCATCTTCGA+CGG + chr8.4:34082629-34082648 MS.gene068107:CDS 35.0%
CCGACAAGTAAAAAATGAGT+GGG - chr8.4:34084453-34084472 None:intergenic 35.0%
CCTCCATTATATGTAGAAGT+TGG - chr8.4:34085122-34085141 None:intergenic 35.0%
GAGAAGAAAATAAAGGAGGA+GGG - chr8.4:34082515-34082534 None:intergenic 35.0%
GCTTGCTCTATTAACACATT+TGG + chr8.4:34083105-34083124 MS.gene068107:CDS 35.0%
GTAGAATTGTAGAAGAAGCA+AGG + chr8.4:34085792-34085811 MS.gene068107:intron 35.0%
GTCCAATAAGTGAAGAATCT+AGG - chr8.4:34084872-34084891 None:intergenic 35.0%
TAAATTGATTGAAGCAAGGG+AGG + chr8.4:34084898-34084917 MS.gene068107:intron 35.0%
TACAACATTGAGATTTGGCA+AGG - chr8.4:34086891-34086910 None:intergenic 35.0%
TATGGATCTGGAAACTTGAT+TGG + chr8.4:34086665-34086684 MS.gene068107:CDS 35.0%
TCTCAAATATGGATCATCTC+TGG + chr8.4:34084295-34084314 MS.gene068107:CDS 35.0%
TGAGACAAGCTGAATTCATA+TGG - chr8.4:34084280-34084299 None:intergenic 35.0%
TGATGAAAATGAAGGGTAGT+TGG - chr8.4:34084764-34084783 None:intergenic 35.0%
TGCTACAATTTACTTTGCTC+TGG + chr8.4:34085050-34085069 MS.gene068107:CDS 35.0%
TGGCTCATATAAAATTACGG+TGG + chr8.4:34083418-34083437 MS.gene068107:intron 35.0%
TTGCTTCTATTTATGCGTGT+AGG + chr8.4:34086613-34086632 MS.gene068107:intron 35.0%
TTTATGTGTATAGGATCCTC+CGG + chr8.4:34082954-34082973 MS.gene068107:intron 35.0%
TTTCAATTGTGGAGTTTCTC+AGG + chr8.4:34083021-34083040 MS.gene068107:CDS 35.0%
! AAAGTGCTCAGAAAGAATGA+GGG - chr8.4:34086119-34086138 None:intergenic 35.0%
! AAGAAGGAACTAATAATGGG+TGG + chr8.4:34086939-34086958 MS.gene068107:CDS 35.0%
! ACGGAGACTAACTTTTCTTT+TGG - chr8.4:34083466-34083485 None:intergenic 35.0%
! CTTAAAGGAAAGTGCAACAA+TGG + chr8.4:34086715-34086734 MS.gene068107:CDS 35.0%
! TACTTTTATTATGGTGGTCC+TGG + chr8.4:34086968-34086987 MS.gene068107:CDS 35.0%
!! AGAAGAAAACAAAGGTACCA+AGG - chr8.4:34086272-34086291 None:intergenic 35.0%
!! AGAAGGAACTAATAATGGGT+GGG + chr8.4:34086940-34086959 MS.gene068107:CDS 35.0%
!!! CCCACTCATTTTTTACTTGT+CGG + chr8.4:34084450-34084469 MS.gene068107:intron 35.0%
!!! GTGATTTTAGCTCCTACATA+GGG + chr8.4:34083532-34083551 MS.gene068107:intron 35.0%
!!! GTTTCTGTTGTTTTCTGTGA+TGG - chr8.4:34083188-34083207 None:intergenic 35.0%
!!! TGTGATTTTAGCTCCTACAT+AGG + chr8.4:34083531-34083550 MS.gene068107:intron 35.0%
!!! TTTTTTGAGGGGAAAGCATA+TGG + chr8.4:34083361-34083380 MS.gene068107:intron 35.0%
AACATAGGATGGTCAAAAGC+TGG - chr8.4:34082824-34082843 None:intergenic 40.0%
AAGTGTGTGAATAGGGATGA+TGG - chr8.4:34086698-34086717 None:intergenic 40.0%
ACATATGCTTGTGTTCGATG+TGG + chr8.4:34086450-34086469 MS.gene068107:intron 40.0%
ACCTGAATTGTCTTAACAGC+AGG - chr8.4:34082664-34082683 None:intergenic 40.0%
ACTGATGCATATCAAGGAAC+TGG + chr8.4:34085026-34085045 MS.gene068107:CDS 40.0%
ATATCCCTCCAAGTTTCTAC+TGG + chr8.4:34085230-34085249 MS.gene068107:intron 40.0%
ATGCAGTTGGATATGTGAGT+GGG + chr8.4:34084197-34084216 MS.gene068107:CDS 40.0%
CAAAATGTCCACTACCCATT+TGG - chr8.4:34086796-34086815 None:intergenic 40.0%
CAGTCTATGATATCACCATC+AGG - chr8.4:34082782-34082801 None:intergenic 40.0%
CATATGGACTTTCCACTTGT+GGG - chr8.4:34084264-34084283 None:intergenic 40.0%
CTAATCGGAATTGTTCCTTC+TGG - chr8.4:34083057-34083076 None:intergenic 40.0%
CTGATGCATATCAAGGAACT+GGG + chr8.4:34085027-34085046 MS.gene068107:CDS 40.0%
CTGGAAACTTGATTGGGTAT+TGG + chr8.4:34086672-34086691 MS.gene068107:CDS 40.0%
GATCTCAATACCATTGAAGC+TGG + chr8.4:34084331-34084350 MS.gene068107:CDS 40.0%
GCAACAATGGTTCAATTTGG+TGG + chr8.4:34086728-34086747 MS.gene068107:CDS 40.0%
GGAGAAGAAAATAAAGGAGG+AGG - chr8.4:34082516-34082535 None:intergenic 40.0%
GTTGAGAGGACAAAAACCAT+TGG + chr8.4:34082841-34082860 MS.gene068107:CDS 40.0%
TCAATACCATTGAAGCTGGT+TGG + chr8.4:34084335-34084354 MS.gene068107:CDS 40.0%
TCATATGGACTTTCCACTTG+TGG - chr8.4:34084265-34084284 None:intergenic 40.0%
TCTCACACTTCTACCCAAAT+GGG + chr8.4:34086779-34086798 MS.gene068107:CDS 40.0%
TCTCATAGTCGAAGTCTCAA+AGG + chr8.4:34085672-34085691 MS.gene068107:intron 40.0%
TCTGACACACATTCAATCTG+AGG - chr8.4:34086424-34086443 None:intergenic 40.0%
TTGCAGACTGATGCATATCA+AGG + chr8.4:34085020-34085039 MS.gene068107:intron 40.0%
TTTGACCATCCTATGTTGAG+AGG + chr8.4:34082827-34082846 MS.gene068107:CDS 40.0%
TTTGTCCTCTCAACATAGGA+TGG - chr8.4:34082835-34082854 None:intergenic 40.0%
! ACCAAGAGAGCATAAGCAAA+TGG + chr8.4:34082981-34083000 MS.gene068107:CDS 40.0%
! CAAAGTGCTCAGAAAGAATG+AGG - chr8.4:34086120-34086139 None:intergenic 40.0%
! CCAAGAGAGCATAAGCAAAT+GGG + chr8.4:34082982-34083001 MS.gene068107:CDS 40.0%
! CCGTCGAAGATGCATTTTTA+TGG - chr8.4:34082632-34082651 None:intergenic 40.0%
! CTCATTGACTAAATTGGCAC+TGG - chr8.4:34085536-34085555 None:intergenic 40.0%
! GGTTTTTGTCCTCTCAACAT+AGG - chr8.4:34082839-34082858 None:intergenic 40.0%
! TGGATCATCTCTGGTTCATT+TGG + chr8.4:34084304-34084323 MS.gene068107:CDS 40.0%
!! AGAAAACAAAGGTACCAAGG+TGG - chr8.4:34086269-34086288 None:intergenic 40.0%
!! GAAGGAACTAATAATGGGTG+GGG + chr8.4:34086941-34086960 MS.gene068107:CDS 40.0%
AAAGTGTGGTCAATGCATGG+TGG + chr8.4:34085708-34085727 MS.gene068107:intron 45.0%
AAGTGTGGTCAATGCATGGT+GGG + chr8.4:34085709-34085728 MS.gene068107:intron 45.0%
AATGATGCACAGCATGCAGT+TGG + chr8.4:34084184-34084203 MS.gene068107:intron 45.0%
ACTTCTACCCAAATGGGTAG+TGG + chr8.4:34086785-34086804 MS.gene068107:CDS 45.0%
AGGATCCAAAGCATGGGAAT+TGG + chr8.4:34086633-34086652 MS.gene068107:intron 45.0%
AGGTGTGGCGTTCAGAATTA+TGG - chr8.4:34086184-34086203 None:intergenic 45.0%
ATATCACCATCAGGACTCTG+CGG - chr8.4:34082773-34082792 None:intergenic 45.0%
ATCCAAAGCATGGGAATTGG+TGG + chr8.4:34086636-34086655 MS.gene068107:CDS 45.0%
ATTGATTGAAGCAAGGGAGG+TGG + chr8.4:34084901-34084920 MS.gene068107:intron 45.0%
CATGCAGTTGGATATGTGAG+TGG + chr8.4:34084196-34084215 MS.gene068107:CDS 45.0%
CCCATTTGCTTATGCTCTCT+TGG - chr8.4:34082985-34083004 None:intergenic 45.0%
GCCTGCTGTTAAGACAATTC+AGG + chr8.4:34082660-34082679 MS.gene068107:CDS 45.0%
GTCTCACACTTCTACCCAAA+TGG + chr8.4:34086778-34086797 MS.gene068107:CDS 45.0%
GTGAGTGGGAATGAGTACTA+TGG + chr8.4:34084211-34084230 MS.gene068107:CDS 45.0%
TCAGGTGAATCATGTCCAGA+AGG + chr8.4:34083039-34083058 MS.gene068107:CDS 45.0%
TGGTGGCTTGAATATGGATC+TGG + chr8.4:34086653-34086672 MS.gene068107:CDS 45.0%
TGTGAGACTACAAGGAGGAT+TGG - chr8.4:34083857-34083876 None:intergenic 45.0%
TGTTTATAAACGTGGCCCGA+TGG + chr8.4:34085380-34085399 MS.gene068107:intron 45.0%
TTATGCTCTCTTGGTCTCTC+CGG - chr8.4:34082976-34082995 None:intergenic 45.0%
TTTATTATGGTGGTCCTGGC+AGG + chr8.4:34086972-34086991 MS.gene068107:CDS 45.0%
! AGACTACAAGGAGGATTGGT+TGG - chr8.4:34083853-34083872 None:intergenic 45.0%
! AGTGGACATTTTGCTGAGGA+GGG + chr8.4:34086803-34086822 MS.gene068107:CDS 45.0%
! CATAGGGCACTCCATTAGTT+TGG + chr8.4:34085734-34085753 MS.gene068107:intron 45.0%
! CTGAAAGTGTGGTCAATGCA+TGG + chr8.4:34085705-34085724 MS.gene068107:intron 45.0%
! GCGTATTTTACTCACCACCT+TGG + chr8.4:34086252-34086271 MS.gene068107:intron 45.0%
! GGACATTTTACATTCCTGCC+AGG - chr8.4:34086989-34087008 None:intergenic 45.0%
! GGGAATTGGTGGCTTGAATA+TGG + chr8.4:34086647-34086666 MS.gene068107:CDS 45.0%
!! TAGTGGACATTTTGCTGAGG+AGG + chr8.4:34086802-34086821 MS.gene068107:CDS 45.0%
!!! TAAATACATTTTTTATTAAT+GGG - chr8.4:34084975-34084994 None:intergenic 5.0%
!!! TTAAATACATTTTTTATTAA+TGG - chr8.4:34084976-34084995 None:intergenic 5.0%
!!! TTTTTTTAAGAAAAAATAAA+TGG + chr8.4:34082716-34082735 MS.gene068107:intron 5.0%
AAAGGAGGAGGGAGATGACT+GGG - chr8.4:34082504-34082523 None:intergenic 50.0%
AAATGTGTGGGTCCCACAAG+TGG + chr8.4:34084249-34084268 MS.gene068107:CDS 50.0%
AGCCACCAATTCCCATGCTT+TGG - chr8.4:34086641-34086660 None:intergenic 50.0%
AGCTATCCCCATAGAGCTCT+GGG - chr8.4:34084847-34084866 None:intergenic 50.0%
AGTGTGGTCAATGCATGGTG+GGG + chr8.4:34085710-34085729 MS.gene068107:intron 50.0%
GCGTGTAGGATCCAAAGCAT+GGG + chr8.4:34086627-34086646 MS.gene068107:intron 50.0%
TAAAGGAGGAGGGAGATGAC+TGG - chr8.4:34082505-34082524 None:intergenic 50.0%
TACCATTGAAGCTGGTTGGC+AGG + chr8.4:34084339-34084358 MS.gene068107:CDS 50.0%
TAGCTATCCCCATAGAGCTC+TGG - chr8.4:34084848-34084867 None:intergenic 50.0%
TGCGTGTAGGATCCAAAGCA+TGG + chr8.4:34086626-34086645 MS.gene068107:intron 50.0%
TTGTACCTCATGTCCATCGC+CGG - chr8.4:34083163-34083182 None:intergenic 50.0%
! GTTTTTCCGCAGAGTCCTGA+TGG + chr8.4:34082764-34082783 MS.gene068107:intron 50.0%
!!! GGGTAGTGGACATTTTGCTG+AGG + chr8.4:34086799-34086818 MS.gene068107:CDS 50.0%
AAGGAGGAGGGAGATGACTG+GGG - chr8.4:34082503-34082522 None:intergenic 55.0%
AGGTCAGCCCAGAGCTCTAT+GGG + chr8.4:34084837-34084856 MS.gene068107:intron 55.0%
CGTGTGAGAATGGACACCAC+CGG + chr8.4:34083141-34083160 MS.gene068107:CDS 55.0%
GTGTGGTCAATGCATGGTGG+GGG + chr8.4:34085711-34085730 MS.gene068107:intron 55.0%
TGCCTGCCAACCAGCTTCAA+TGG - chr8.4:34084344-34084363 None:intergenic 55.0%
! CAATGCATGGTGGGGGCATA+GGG + chr8.4:34085718-34085737 MS.gene068107:intron 55.0%
! TCAATGCATGGTGGGGGCAT+AGG + chr8.4:34085717-34085736 MS.gene068107:intron 55.0%
AGAATGGACACCACCGGCGA+TGG + chr8.4:34083147-34083166 MS.gene068107:CDS 60.0%
CAGGTCAGCCCAGAGCTCTA+TGG + chr8.4:34084836-34084855 MS.gene068107:intron 60.0%
GGTCAGCCCAGAGCTCTATG+GGG + chr8.4:34084838-34084857 MS.gene068107:intron 60.0%
TACCTCATGTCCATCGCCGG+TGG - chr8.4:34083160-34083179 None:intergenic 60.0%
TGCTCTCTTGGTCTCTCCGG+AGG - chr8.4:34082973-34082992 None:intergenic 60.0%
! TTTTTGTGTGCGCGCGCGTG+TGG + chr8.4:34086564-34086583 MS.gene068107:intron 60.0%
CACCACCGGCGATGGACATG+AGG + chr8.4:34083155-34083174 MS.gene068107:CDS 65.0%


Chromosome Type Strat End Strand Name
chr8.4 gene 34082487 34087012 34082487 ID=MS.gene068107
chr8.4 mRNA 34082487 34087012 34082487 ID=MS.gene068107.t1;Parent=MS.gene068107
chr8.4 exon 34082487 34082681 34082487 ID=MS.gene068107.t1.exon1;Parent=MS.gene068107.t1
chr8.4 CDS 34082487 34082681 34082487 ID=cds.MS.gene068107.t1;Parent=MS.gene068107.t1
chr8.4 exon 34082776 34082862 34082776 ID=MS.gene068107.t1.exon2;Parent=MS.gene068107.t1
chr8.4 CDS 34082776 34082862 34082776 ID=cds.MS.gene068107.t1;Parent=MS.gene068107.t1
chr8.4 exon 34082967 34083176 34082967 ID=MS.gene068107.t1.exon3;Parent=MS.gene068107.t1
chr8.4 CDS 34082967 34083176 34082967 ID=cds.MS.gene068107.t1;Parent=MS.gene068107.t1
chr8.4 exon 34084196 34084360 34084196 ID=MS.gene068107.t1.exon4;Parent=MS.gene068107.t1
chr8.4 CDS 34084196 34084360 34084196 ID=cds.MS.gene068107.t1;Parent=MS.gene068107.t1
chr8.4 exon 34084839 34084892 34084839 ID=MS.gene068107.t1.exon5;Parent=MS.gene068107.t1
chr8.4 CDS 34084839 34084892 34084839 ID=cds.MS.gene068107.t1;Parent=MS.gene068107.t1
chr8.4 exon 34085026 34085172 34085026 ID=MS.gene068107.t1.exon6;Parent=MS.gene068107.t1
chr8.4 CDS 34085026 34085172 34085026 ID=cds.MS.gene068107.t1;Parent=MS.gene068107.t1
chr8.4 exon 34086635 34087012 34086635 ID=MS.gene068107.t1.exon7;Parent=MS.gene068107.t1
chr8.4 CDS 34086635 34087012 34086635 ID=cds.MS.gene068107.t1;Parent=MS.gene068107.t1
Gene Sequence

>MS.gene068107

ATGGATTTTAGCTCCCCAGTCATCTCCCTCCTCCTTTATTTTCTTCTCCTTGTTTCTTTGGTTTGTCATGTTTATTCTTCAGAAACAAGTGGCCAAAATCAAACTTTTCTACCAAATGAAGAGTTTCACAAGTTTAGGAGGACCATAAAAATGCATCTTCGACGGATCAACAAGCCTGCTGTTAAGACAATTCAGGTATGTTAAAAATGTCTTCAAAAAATTTCTGAATTTTTTTTAAGAAAAAATAAATGGTGTTTGTGTGATATGTGTTTGTGTTGTTTTTCCGCAGAGTCCTGATGGTGATATCATAGACTGTGTTATGTCTCATAGACAACCAGCTTTTGACCATCCTATGTTGAGAGGACAAAAACCATTGGTATTTTTCTTAGTTTTTTTTCTCTATTGAGCGGAAATTAAAATAAAAAATTTCTTTTATATAATTATATTTCAACTTATAATTGTTCGGTTTTATGTGTATAGGATCCTCCGGAGAGACCAAGAGAGCATAAGCAAATGGGCATTGAAAATTATAACTTTCAATTGTGGAGTTTCTCAGGTGAATCATGTCCAGAAGGAACAATTCCGATTAGAAGAATAAAAGAAGGTGACATGTTAAGAGCTTGCTCTATTAACACATTTGGAAGAAAATTGAAACGTGTGAGAATGGACACCACCGGCGATGGACATGAGGTACAATGCCATCACAGAAAACAACAGAAACTCAGATTATTTTGTCTCATAATTTCTTTTATATTATATTTTTATGTTTCTTTTCATTATGGTAAAGTATGGAATAAATAAACAACTTAAGAGATAACCCAAAAAACAACTTAACATAGATAGATAATGGAAATTGGTAAAGTATATGGTAGTATTTTTTGAGGGGAAAGCATATGGTAGTTGAGTATTTAATTTTTCGTTAAATATGTTTTGGCTCATATAAAATTACGGTGGTAAGTTTAGTCTTTATAGCCTTCCAAAAGAAAAGTTAGTCTCCGTAAAAGAAATTTGACCATTTTTGTCTATATTTTCTTTATAAGAACTTGTGATTTTAGCTCCTACATAGGGACTAAAGTATGTATTAAATTTTATAAAAAGTAAAGATTAAAAATTGTTCAATAAGTTTTTTTTTTTTGAAACAGTTCAAAAAGAATTTATAAAGACTAAAACAATTTTTTTATATTTTATAAGTTACAAAAACATATGTATCCATTCATTTCTTTTGAAATAATTAATATCGGTCATAAAAGAGAAATTCCAAATGTCTTCTTTTTCTTTTTATATTATATTTTTTTAAAAATTTATAAGTATGAAAATGAAGATAGTACGATTAGCACAAAAAAATTGAAAATGATCTGTAGTACCAACCAATCCTCCTTGTAGTCTCACATTAATACAAACAAAATAATATTATGATAACTTCTTCCAAAAATAATATTCTGATAAAAGCATAATAGACAAGTGTTCTTTTTTTTTTTTTTTGTCTTTCTAATTTACTCATGAAGCTAAGTCCTTTTTCAATTTAAAGTGGTCACTGAATTTCATGGTTACTCACTTCTCAGTTTATTAATAGGTGGACCAATTATTTTTATCTTCAATAGAAATAATCTTAGACACAACAAAAACCAACATTGAATCTAATATAAATCTTGTGCTATTTTTGAAAATAAAGTACTAACAACAAATTGGTTCTTCTTAATGATGCACAGCATGCAGTTGGATATGTGAGTGGGAATGAGTACTATGGAGCAAAAGCTAGCATAAATGTGTGGGTCCCACAAGTGGAAAGTCCATATGAATTCAGCTTGTCTCAAATATGGATCATCTCTGGTTCATTTGGAGTAGATCTCAATACCATTGAAGCTGGTTGGCAGGCATGTTGATTATTTTCATTAATTACTTCATCTTAGACAATCAATTCATTCAATCACTTCTTTTGCACTGCTTTTTTTTAGTAGGTACTCCCACTCATTTTTTACTTGTCGGTTACGTGTATTTCATACGTCTCATAATAAGTGACATTGTAGACAGTTGCACATAGATATTTTTGACATTTAATATTTTTGATTATGTATTAGTAAAAATTATAAATGCAAATCCAATACTTAATAATGATACTTTAATAAAAATGATTTTTTTTTTTTGAAGGAATAAATTTGGAAAGAAGGGAGTATAGTATTAATCTTTTACACAATTTTTTTAAACTAATTTTACACGAAAATTCTTAAATTGATTGGATTTGGTTTTGCATTAAATAGGCAGTTAGAATGTCAACCAACTACCCTTCATTTTCATCAATGTTTTTAATTTTGTATTGGTCAATCAAGCTAAGTTTAAGTAATTTTTATGCAGGTCAGCCCAGAGCTCTATGGGGATAGCTACCCTAGATTCTTCACTTATTGGACGGTAAGTAAATTGATTGAAGCAAGGGAGGTGGAAAAGTAAAATATCTATGATTGATACTACTTGCTTCAAGTGTAAGATACCCATTAATAAAAAATGTATTTAAAAAAATGATAATGGCTAGTAATAATTGCAGACTGATGCATATCAAGGAACTGGGTGCTACAATTTACTTTGCTCTGGCTTTGTTCAAACTAGCAGTAATATTGCAATTGGAGCAGCAATTTCTCCAACTTCTACATATAATGGAGGCCAATTTGATATTAGCTTAATGATCTGGAAGGTAATTTTCTGCTCAGAATACCAAAGTGACCTTAGAAGATTATGGGTAATTTGGTATATATCCCTCCAAGTTTCTACTGGTATTTACTACTCCTCCGATCACATTTATAATCAATTTTTTTTTTAAATTTATTAAATAACTGATGTATCTAGATTATAATATAGTCTAGATACATCCGTTATTTAATGAATGTGAAAAATTAAAAATTGTTTATAAACGTGGCCCGATGGAGTACTTATTTTCAATAATAATACAGCTTCAAATATGTAAAATAAGTCAATTTAGTTACTAAAGTTAAAACAAAATAAAATAGTTCTTCGAAATAAAAAAAATTCAATTAATTAATTATAATTAATTATTCCAGTGCCAATTTAGTCAATGAGATTATTGCATATTGACAAATGTGATTAGAAACTTTTAGTTTTAAAGAACATCTGAATATTTTTTTAACTTTAATAACCAAATTAACTAACCATTGATTTGTTACAAAATATTGAAGTCTCATAGTCGAAGTCTCAAAGGAAAATTTAAGCTGAAAGTGTGGTCAATGCATGGTGGGGGCATAGGGCACTCCATTAGTTTGGAAGTCTCATTATATGCTTTCGAATTTTGTTATTATGTAGAATTGTAGAAGAAGCAAGGGCAAGTTTATTATAACATGTTCACAACATAATAATTTGTTTTGAAAAAAGCAACATAAATGACACACAAAAGGGGAAAAACAATATAATGAACAAAATTTTCTAGTGTTCAAATGTTAGTGAATTTAGGTACCATATTTACTCACTTTACTACTTTGGTACATTACACGCATGAACTGTGTGAATTTGAATGTAACTCCCTTATGCTTTTTATCTCTTTCAAGATTCTTTTTCTTTATTCTTTTTTCTTTCCCTTTTTTGTTTCTTTTTTTCACCACATAATTTATCATATTTTTTACTTTCCCTCATTCTTTCTGAGCACTTTGAGAACATCATTTTCCTTTGCTTTTTACGACTTAAAGATATTCCATAATTCTGAACGCCACACCTTTTTTTATTCCTTCATTTTTCTCTTATTTAACAAAACCCTAATATTTTGCGTATTTTACTCACCACCTTGGTACCTTTGTTTTCTTCTTTTTGACTCATTTCTATTATCATGTCAGCTAACATGCTGCTCTTAATGATTATGTTTATGTTTGAGTAATTTAACTTTGTCACAAAACAAAAGTTGTATCGTTGAAGATTTACTAGGGTAACATTGATACCTCAGATTGAATGTGTGTCAGATGATTAACATATGCTTGTGTTCGATGTGGTTATATTAATTCAGTTACTTCTATTTTTCTTTTTTAAACTATTAAAAAGGTTTATATCACAATGTTAGTGTTGTGTATGGTATTTTTTTTTTTTTTGTGTGCGCGCGCGTGTGGTGTTTGTGTTTCATATATAGTTTACTTTGCTTCTATTTATGCGTGTAGGATCCAAAGCATGGGAATTGGTGGCTTGAATATGGATCTGGAAACTTGATTGGGTATTGGCCATCATCCCTATTCACACACTTAAAGGAAAGTGCAACAATGGTTCAATTTGGTGGAGAAATAGTGAATACAATGTCAACAGGGTCTCACACTTCTACCCAAATGGGTAGTGGACATTTTGCTGAGGAGGGTTTTGCAAAAGCTGCATACTTTAGAAATATGCAAGTTGTGGATTCTGATAACAGCTTGATTCCCTTGCCAAATCTCAATGTTGTAGCTAACCGTCCAAATTGTTATAATATACAAGAAGGAACTAATAATGGGTGGGGAAATTACTTTTATTATGGTGGTCCTGGCAGGAATGTAAAATGTCCCTAA
Protein sequence

>MS.gene068107.t1

MDFSSPVISLLLYFLLLVSLVCHVYSSETSGQNQTFLPNEEFHKFRRTIKMHLRRINKPAVKTIQSPDGDIIDCVMSHRQPAFDHPMLRGQKPLDPPERPREHKQMGIENYNFQLWSFSGESCPEGTIPIRRIKEGDMLRACSINTFGRKLKRVRMDTTGDGHEHAVGYVSGNEYYGAKASINVWVPQVESPYEFSLSQIWIISGSFGVDLNTIEAGWQVSPELYGDSYPRFFTYWTTDAYQGTGCYNLLCSGFVQTSSNIAIGAAISPTSTYNGGQFDISLMIWKDPKHGNWWLEYGSGNLIGYWPSSLFTHLKESATMVQFGGEIVNTMSTGSHTSTQMGSGHFAEEGFAKAAYFRNMQVVDSDNSLIPLPNLNVVANRPNCYNIQEGTNNGWGNYFYYGGPGRNVKCP