Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene068226.t1 | RHN78869.1 | 87.2 | 484 | 34 | 2 | 1 | 482 | 90 | 547 | 2.40E-245 | 857.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene068226.t1 | O82175 | 42.3 | 489 | 226 | 15 | 2 | 481 | 353 | 794 | 1.2e-91 | 338.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene068226.t1 | A0A072VTA4 | 87.2 | 484 | 34 | 2 | 1 | 482 | 77 | 534 | 1.7e-245 | 857.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene068226.t1 | TR | SET |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene050020 | MS.gene068226 | 0.801017 | 1.10E-48 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene068226.t1 | MTR_1g048950 | 88.382 | 482 | 32 | 1 | 1 | 482 | 77 | 534 | 0.0 | 843 |
MS.gene068226.t1 | MTR_5g013420 | 40.467 | 514 | 225 | 10 | 1 | 481 | 624 | 1089 | 7.03e-108 | 345 |
MS.gene068226.t1 | MTR_5g013420 | 40.467 | 514 | 225 | 10 | 1 | 481 | 624 | 1089 | 4.56e-107 | 343 |
MS.gene068226.t1 | MTR_4g010830 | 39.689 | 514 | 228 | 11 | 1 | 481 | 516 | 980 | 3.72e-103 | 330 |
MS.gene068226.t1 | MTR_4g010550 | 38.618 | 492 | 218 | 11 | 9 | 481 | 38 | 464 | 5.00e-97 | 300 |
MS.gene068226.t1 | MTR_3g011440 | 33.012 | 518 | 256 | 15 | 9 | 480 | 191 | 663 | 2.23e-72 | 241 |
MS.gene068226.t1 | MTR_7g088370 | 32.475 | 505 | 267 | 15 | 1 | 478 | 245 | 702 | 6.19e-71 | 239 |
MS.gene068226.t1 | MTR_6g061200 | 33.130 | 492 | 267 | 13 | 11 | 481 | 215 | 665 | 1.24e-70 | 237 |
MS.gene068226.t1 | MTR_8g042750 | 31.907 | 514 | 260 | 10 | 9 | 478 | 218 | 685 | 3.75e-70 | 236 |
MS.gene068226.t1 | MTR_6g061270 | 32.500 | 520 | 262 | 13 | 11 | 481 | 215 | 694 | 9.16e-70 | 235 |
MS.gene068226.t1 | MTR_7g084090 | 31.870 | 524 | 259 | 14 | 12 | 481 | 278 | 757 | 2.01e-69 | 236 |
MS.gene068226.t1 | MTR_1g035420 | 32.787 | 488 | 254 | 12 | 1 | 455 | 198 | 644 | 3.95e-63 | 217 |
MS.gene068226.t1 | MTR_8g070075 | 30.816 | 490 | 264 | 14 | 1 | 455 | 299 | 748 | 1.09e-61 | 214 |
MS.gene068226.t1 | MTR_7g445710 | 30.435 | 529 | 219 | 13 | 1 | 481 | 116 | 543 | 1.89e-61 | 210 |
MS.gene068226.t1 | MTR_8g070070 | 32.041 | 490 | 258 | 13 | 1 | 455 | 306 | 755 | 2.67e-61 | 214 |
MS.gene068226.t1 | MTR_7g450730 | 31.537 | 501 | 215 | 12 | 1 | 481 | 113 | 505 | 3.11e-61 | 208 |
MS.gene068226.t1 | MTR_8g071030 | 32.587 | 491 | 254 | 15 | 1 | 455 | 286 | 735 | 5.82e-61 | 213 |
MS.gene068226.t1 | MTR_7g445530 | 30.862 | 499 | 201 | 13 | 1 | 456 | 116 | 513 | 5.31e-57 | 197 |
MS.gene068226.t1 | MTR_6g044690 | 31.884 | 483 | 240 | 15 | 12 | 455 | 130 | 562 | 3.36e-56 | 196 |
MS.gene068226.t1 | MTR_1g035400 | 31.034 | 493 | 258 | 16 | 1 | 455 | 115 | 563 | 2.89e-52 | 186 |
MS.gene068226.t1 | MTR_7g084090 | 32.713 | 376 | 191 | 9 | 12 | 369 | 278 | 609 | 4.56e-52 | 187 |
MS.gene068226.t1 | MTR_6g043960 | 29.193 | 483 | 232 | 16 | 12 | 455 | 69 | 480 | 1.58e-46 | 168 |
MS.gene068226.t1 | MTR_0376s0030 | 27.879 | 495 | 275 | 14 | 12 | 471 | 130 | 577 | 1.63e-45 | 167 |
MS.gene068226.t1 | MTR_2g054460 | 28.992 | 476 | 214 | 15 | 12 | 455 | 79 | 462 | 2.17e-42 | 157 |
MS.gene068226.t1 | MTR_7g052480 | 31.699 | 306 | 167 | 8 | 214 | 481 | 255 | 556 | 1.67e-37 | 145 |
MS.gene068226.t1 | MTR_5g018850 | 31.778 | 343 | 178 | 10 | 192 | 481 | 1168 | 1507 | 1.11e-34 | 139 |
MS.gene068226.t1 | MTR_8g078490 | 30.581 | 327 | 171 | 10 | 201 | 481 | 937 | 1253 | 2.05e-34 | 138 |
MS.gene068226.t1 | MTR_7g445600 | 46.512 | 129 | 57 | 2 | 328 | 456 | 240 | 356 | 4.65e-34 | 131 |
MS.gene068226.t1 | MTR_7g445600 | 36.000 | 125 | 70 | 3 | 1 | 124 | 112 | 227 | 4.12e-13 | 70.9 |
MS.gene068226.t1 | MTR_8g078505 | 32.313 | 294 | 154 | 9 | 223 | 476 | 245 | 533 | 7.06e-33 | 131 |
MS.gene068226.t1 | MTR_4g132610 | 36.816 | 201 | 106 | 5 | 297 | 481 | 852 | 1047 | 2.24e-30 | 125 |
MS.gene068226.t1 | MTR_1g069570 | 29.299 | 314 | 157 | 10 | 228 | 476 | 428 | 741 | 2.78e-26 | 113 |
MS.gene068226.t1 | MTR_1g080340 | 29.693 | 293 | 140 | 10 | 228 | 455 | 267 | 558 | 3.38e-25 | 109 |
MS.gene068226.t1 | MTR_7g098390 | 27.077 | 325 | 160 | 11 | 222 | 476 | 380 | 697 | 1.34e-19 | 92.4 |
MS.gene068226.t1 | MTR_1g069570 | 28.514 | 249 | 116 | 8 | 228 | 414 | 428 | 676 | 4.17e-19 | 90.9 |
MS.gene068226.t1 | MTR_1g098000 | 36.000 | 175 | 84 | 7 | 316 | 477 | 72 | 231 | 9.67e-19 | 89.4 |
MS.gene068226.t1 | MTR_1g098370 | 35.429 | 175 | 85 | 7 | 316 | 477 | 75 | 234 | 4.37e-18 | 87.0 |
MS.gene068226.t1 | MTR_6g027690 | 29.075 | 227 | 123 | 8 | 271 | 480 | 214 | 419 | 1.69e-17 | 85.1 |
MS.gene068226.t1 | MTR_3g088625 | 32.530 | 166 | 100 | 4 | 320 | 480 | 1200 | 1358 | 4.38e-16 | 82.0 |
MS.gene068226.t1 | MTR_3g088625 | 32.530 | 166 | 100 | 4 | 320 | 480 | 1306 | 1464 | 5.64e-16 | 81.6 |
MS.gene068226.t1 | MTR_0071s0100 | 33.939 | 165 | 97 | 5 | 317 | 478 | 191 | 346 | 1.83e-15 | 78.6 |
MS.gene068226.t1 | MTR_1g012910 | 35.862 | 145 | 79 | 5 | 340 | 476 | 528 | 666 | 3.38e-14 | 75.5 |
MS.gene068226.t1 | MTR_1g012910 | 35.862 | 145 | 79 | 5 | 340 | 476 | 365 | 503 | 4.06e-14 | 75.1 |
MS.gene068226.t1 | MTR_6g059310 | 28.814 | 177 | 104 | 5 | 313 | 480 | 87 | 250 | 6.43e-14 | 73.2 |
MS.gene068226.t1 | MTR_6g059310 | 28.814 | 177 | 104 | 5 | 313 | 480 | 87 | 250 | 8.20e-14 | 73.2 |
MS.gene068226.t1 | MTR_1g012890 | 33.793 | 145 | 82 | 5 | 340 | 476 | 225 | 363 | 1.90e-12 | 68.9 |
MS.gene068226.t1 | MTR_7g445810 | 33.571 | 140 | 80 | 4 | 12 | 151 | 141 | 267 | 7.35e-11 | 63.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene068226.t1 | AT2G35160 | 42.977 | 477 | 217 | 14 | 14 | 481 | 328 | 758 | 4.30e-109 | 340 |
MS.gene068226.t1 | AT2G35160 | 42.977 | 477 | 217 | 14 | 14 | 481 | 364 | 794 | 1.73e-108 | 340 |
MS.gene068226.t1 | AT2G35160 | 42.977 | 477 | 217 | 14 | 14 | 481 | 364 | 794 | 1.73e-108 | 340 |
MS.gene068226.t1 | AT2G35160 | 42.977 | 477 | 217 | 14 | 14 | 481 | 364 | 794 | 1.73e-108 | 340 |
MS.gene068226.t1 | AT2G35160 | 42.977 | 477 | 217 | 14 | 14 | 481 | 364 | 794 | 1.73e-108 | 340 |
MS.gene068226.t1 | AT2G22740 | 36.641 | 524 | 241 | 12 | 1 | 481 | 315 | 790 | 1.14e-91 | 296 |
MS.gene068226.t1 | AT2G22740 | 36.641 | 524 | 241 | 12 | 1 | 481 | 315 | 790 | 1.14e-91 | 296 |
MS.gene068226.t1 | AT1G73100 | 32.685 | 514 | 257 | 14 | 9 | 480 | 202 | 668 | 4.32e-71 | 238 |
MS.gene068226.t1 | AT5G04940 | 33.008 | 512 | 256 | 14 | 9 | 480 | 205 | 669 | 2.66e-69 | 234 |
MS.gene068226.t1 | AT5G04940 | 33.008 | 512 | 256 | 14 | 9 | 480 | 205 | 669 | 2.66e-69 | 234 |
MS.gene068226.t1 | AT5G13960 | 31.407 | 519 | 267 | 16 | 12 | 481 | 12 | 490 | 1.32e-62 | 211 |
MS.gene068226.t1 | AT2G33290 | 32.673 | 505 | 260 | 15 | 1 | 471 | 192 | 650 | 3.11e-62 | 214 |
MS.gene068226.t1 | AT2G33290 | 32.673 | 505 | 260 | 15 | 1 | 471 | 192 | 650 | 3.11e-62 | 214 |
MS.gene068226.t1 | AT2G33290 | 32.673 | 505 | 260 | 15 | 1 | 471 | 192 | 650 | 3.11e-62 | 214 |
MS.gene068226.t1 | AT2G33290 | 32.673 | 505 | 260 | 15 | 1 | 471 | 192 | 650 | 3.11e-62 | 214 |
MS.gene068226.t1 | AT5G13960 | 31.395 | 516 | 271 | 16 | 12 | 481 | 146 | 624 | 1.59e-61 | 212 |
MS.gene068226.t1 | AT4G13460 | 30.658 | 486 | 255 | 12 | 7 | 455 | 196 | 636 | 2.34e-58 | 204 |
MS.gene068226.t1 | AT4G13460 | 30.658 | 486 | 255 | 12 | 7 | 455 | 196 | 636 | 2.34e-58 | 204 |
MS.gene068226.t1 | AT1G17770 | 30.385 | 520 | 266 | 18 | 9 | 480 | 221 | 692 | 6.67e-56 | 198 |
MS.gene068226.t1 | AT2G24740 | 30.059 | 509 | 261 | 16 | 9 | 480 | 304 | 754 | 9.97e-52 | 187 |
MS.gene068226.t1 | AT2G23740 | 33.758 | 314 | 162 | 11 | 204 | 478 | 1073 | 1379 | 3.68e-35 | 140 |
MS.gene068226.t1 | AT2G23740 | 33.758 | 314 | 162 | 11 | 204 | 478 | 1073 | 1379 | 3.68e-35 | 140 |
MS.gene068226.t1 | AT2G23740 | 33.758 | 314 | 162 | 11 | 204 | 478 | 1073 | 1379 | 3.68e-35 | 140 |
MS.gene068226.t1 | AT2G23740 | 33.758 | 314 | 162 | 11 | 204 | 478 | 1066 | 1372 | 3.81e-35 | 140 |
MS.gene068226.t1 | AT5G47150 | 44.512 | 164 | 81 | 3 | 9 | 171 | 170 | 324 | 7.43e-29 | 116 |
MS.gene068226.t1 | AT5G47160 | 43.030 | 165 | 75 | 3 | 9 | 167 | 256 | 407 | 2.68e-27 | 114 |
MS.gene068226.t1 | AT5G47160 | 43.030 | 165 | 75 | 3 | 9 | 167 | 256 | 407 | 2.68e-27 | 114 |
MS.gene068226.t1 | AT5G47160 | 43.030 | 165 | 75 | 3 | 9 | 167 | 256 | 407 | 2.68e-27 | 114 |
MS.gene068226.t1 | AT3G04380 | 26.744 | 430 | 213 | 19 | 125 | 476 | 52 | 457 | 8.31e-24 | 104 |
MS.gene068226.t1 | AT3G04380 | 26.744 | 430 | 213 | 19 | 125 | 476 | 36 | 441 | 8.58e-24 | 104 |
MS.gene068226.t1 | AT3G04380 | 26.744 | 430 | 213 | 19 | 125 | 476 | 52 | 457 | 1.05e-23 | 104 |
MS.gene068226.t1 | AT3G04380 | 28.274 | 336 | 172 | 13 | 211 | 479 | 84 | 417 | 4.78e-23 | 102 |
MS.gene068226.t1 | AT3G04380 | 28.529 | 333 | 169 | 13 | 211 | 476 | 100 | 430 | 5.94e-23 | 101 |
MS.gene068226.t1 | AT3G04380 | 28.529 | 333 | 169 | 13 | 211 | 476 | 100 | 430 | 6.41e-23 | 101 |
MS.gene068226.t1 | AT2G23740 | 32.932 | 249 | 122 | 10 | 204 | 414 | 1073 | 1314 | 1.19e-22 | 102 |
MS.gene068226.t1 | AT2G23740 | 32.932 | 249 | 122 | 10 | 204 | 414 | 1073 | 1314 | 1.19e-22 | 102 |
MS.gene068226.t1 | AT3G03750 | 33.696 | 184 | 100 | 4 | 316 | 480 | 169 | 349 | 6.85e-21 | 94.4 |
MS.gene068226.t1 | AT5G43990 | 34.973 | 183 | 104 | 7 | 308 | 476 | 523 | 704 | 1.19e-20 | 95.9 |
MS.gene068226.t1 | AT5G43990 | 34.973 | 183 | 104 | 7 | 308 | 476 | 523 | 704 | 1.19e-20 | 95.9 |
MS.gene068226.t1 | AT5G43990 | 34.973 | 183 | 104 | 7 | 308 | 476 | 520 | 701 | 1.22e-20 | 95.9 |
MS.gene068226.t1 | AT5G43990 | 34.973 | 183 | 104 | 7 | 308 | 476 | 520 | 701 | 1.22e-20 | 95.9 |
MS.gene068226.t1 | AT5G43990 | 34.973 | 183 | 104 | 7 | 308 | 476 | 520 | 701 | 1.22e-20 | 95.9 |
MS.gene068226.t1 | AT5G43990 | 34.973 | 183 | 104 | 7 | 308 | 476 | 520 | 701 | 1.22e-20 | 95.9 |
MS.gene068226.t1 | AT5G43990 | 34.973 | 183 | 104 | 7 | 308 | 476 | 500 | 681 | 1.23e-20 | 95.9 |
MS.gene068226.t1 | AT5G43990 | 34.973 | 183 | 104 | 7 | 308 | 476 | 500 | 681 | 1.23e-20 | 95.9 |
MS.gene068226.t1 | AT5G43990 | 34.973 | 183 | 104 | 7 | 308 | 476 | 500 | 681 | 1.23e-20 | 95.9 |
MS.gene068226.t1 | AT5G43990 | 34.973 | 183 | 104 | 7 | 308 | 476 | 500 | 681 | 1.23e-20 | 95.9 |
MS.gene068226.t1 | AT5G43990 | 34.973 | 183 | 104 | 7 | 308 | 476 | 431 | 612 | 1.34e-20 | 95.5 |
MS.gene068226.t1 | AT5G43990 | 34.973 | 183 | 104 | 7 | 308 | 476 | 543 | 724 | 1.42e-20 | 95.5 |
MS.gene068226.t1 | AT5G43990 | 34.973 | 183 | 104 | 7 | 308 | 476 | 543 | 724 | 1.42e-20 | 95.5 |
MS.gene068226.t1 | AT5G43990 | 34.973 | 183 | 104 | 7 | 308 | 476 | 451 | 632 | 1.42e-20 | 95.5 |
MS.gene068226.t1 | AT5G43990 | 34.973 | 183 | 104 | 7 | 308 | 476 | 451 | 632 | 1.42e-20 | 95.5 |
MS.gene068226.t1 | AT5G43990 | 34.973 | 183 | 104 | 7 | 308 | 476 | 451 | 632 | 1.42e-20 | 95.5 |
MS.gene068226.t1 | AT5G43990 | 34.973 | 183 | 104 | 7 | 308 | 476 | 451 | 632 | 1.42e-20 | 95.5 |
MS.gene068226.t1 | AT1G04050 | 31.915 | 188 | 110 | 5 | 308 | 479 | 536 | 721 | 8.11e-19 | 90.1 |
MS.gene068226.t1 | AT1G04050 | 31.915 | 188 | 110 | 5 | 308 | 479 | 536 | 721 | 8.11e-19 | 90.1 |
MS.gene068226.t1 | AT1G04050 | 31.915 | 188 | 110 | 5 | 308 | 479 | 432 | 617 | 9.41e-19 | 89.7 |
MS.gene068226.t1 | AT1G77300 | 30.488 | 164 | 106 | 3 | 320 | 480 | 1008 | 1166 | 1.26e-15 | 80.5 |
MS.gene068226.t1 | AT1G77300 | 30.952 | 168 | 100 | 4 | 320 | 480 | 1008 | 1166 | 1.38e-15 | 80.5 |
MS.gene068226.t1 | AT3G03750 | 33.728 | 169 | 104 | 4 | 316 | 480 | 169 | 333 | 1.94e-15 | 77.8 |
MS.gene068226.t1 | AT4G30860 | 28.631 | 241 | 130 | 8 | 245 | 480 | 261 | 464 | 1.02e-13 | 73.6 |
MS.gene068226.t1 | AT1G76710 | 31.395 | 172 | 98 | 7 | 316 | 478 | 66 | 226 | 3.00e-13 | 72.4 |
MS.gene068226.t1 | AT1G76710 | 31.395 | 172 | 98 | 7 | 316 | 478 | 66 | 226 | 3.08e-13 | 72.0 |
MS.gene068226.t1 | AT1G76710 | 31.395 | 172 | 98 | 7 | 316 | 478 | 66 | 226 | 3.08e-13 | 72.0 |
MS.gene068226.t1 | AT1G76710 | 31.395 | 172 | 98 | 7 | 316 | 478 | 66 | 226 | 3.09e-13 | 72.4 |
MS.gene068226.t1 | AT3G59960 | 30.539 | 167 | 94 | 4 | 323 | 480 | 96 | 249 | 4.72e-11 | 63.9 |
MS.gene068226.t1 | AT3G59960 | 30.539 | 167 | 94 | 4 | 323 | 480 | 96 | 249 | 4.72e-11 | 63.9 |
MS.gene068226.t1 | AT3G59960 | 30.539 | 167 | 94 | 4 | 323 | 480 | 96 | 249 | 4.72e-11 | 63.9 |
MS.gene068226.t1 | AT5G42400 | 30.201 | 149 | 86 | 5 | 339 | 480 | 1250 | 1387 | 6.53e-11 | 65.5 |
MS.gene068226.t1 | AT5G42400 | 30.201 | 149 | 86 | 5 | 339 | 480 | 1250 | 1387 | 6.53e-11 | 65.5 |
MS.gene068226.t1 | AT5G42400 | 30.201 | 149 | 86 | 5 | 339 | 480 | 1250 | 1387 | 6.53e-11 | 65.5 |
MS.gene068226.t1 | AT5G42400 | 30.201 | 149 | 86 | 5 | 339 | 480 | 1250 | 1387 | 6.53e-11 | 65.5 |
MS.gene068226.t1 | AT5G42400 | 30.201 | 149 | 86 | 5 | 339 | 480 | 1250 | 1387 | 6.53e-11 | 65.5 |
MS.gene068226.t1 | AT5G42400 | 30.201 | 149 | 86 | 5 | 339 | 480 | 1250 | 1387 | 6.53e-11 | 65.5 |
MS.gene068226.t1 | AT5G42400 | 30.201 | 149 | 86 | 5 | 339 | 480 | 1250 | 1387 | 6.53e-11 | 65.5 |
MS.gene068226.t1 | AT5G42400 | 30.201 | 149 | 86 | 5 | 339 | 480 | 1250 | 1387 | 6.53e-11 | 65.5 |
MS.gene068226.t1 | AT3G59960 | 30.539 | 167 | 94 | 4 | 323 | 480 | 96 | 249 | 9.40e-11 | 63.5 |
Find 121 sgRNAs with CRISPR-Local
Find 136 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTCATGTGGTATCGATTATT+TGG | 0.102559 | 1.2:-32532725 | MS.gene068226:CDS |
TACATGCCCTATTCTCTTTC+CGG | 0.210201 | 1.2:+32532819 | None:intergenic |
TGTTTCCCCTCGAGATGTTT+TGG | 0.240459 | 1.2:-32532326 | MS.gene068226:CDS |
GCGACACCGTCCCTTGTATT+AGG | 0.249242 | 1.2:+32532598 | None:intergenic |
CTTCAGAATTGTGTCTCTTC+TGG | 0.280628 | 1.2:+32532296 | None:intergenic |
GGTATCTCCACATAGCTTAT+AGG | 0.280802 | 1.2:+32532115 | None:intergenic |
TCCTGTTAGGGTTATATTGC+AGG | 0.288637 | 1.2:-32532512 | MS.gene068226:CDS |
GTTTGTGCTTAAGAAAATTC+AGG | 0.305686 | 1.2:-32532362 | MS.gene068226:CDS |
GTTCGGCCCTATATTGAAAT+TGG | 0.307938 | 1.2:+32532776 | None:intergenic |
AGTATTGAACGATTCGTCTT+TGG | 0.310118 | 1.2:+32532058 | None:intergenic |
GTATCGATTATTTGGGTAAA+GGG | 0.327727 | 1.2:-32532717 | MS.gene068226:CDS |
TGTTCGAATCAATGATATTT+CGG | 0.328396 | 1.2:-32532173 | MS.gene068226:CDS |
ACTAGGTAACCGAAGGGTTT+AGG | 0.329178 | 1.2:+32532094 | None:intergenic |
CGCGCCTCATGATCAGAAAT+TGG | 0.347176 | 1.2:-32532578 | MS.gene068226:CDS |
ACTCGAGTAAGAGGACAATT+TGG | 0.352436 | 1.2:-32532400 | MS.gene068226:CDS |
TGGTGACCAATTTCAATATA+GGG | 0.354159 | 1.2:-32532782 | MS.gene068226:CDS |
CGCGCGGAAATCTTGCTTTG+TGG | 0.366478 | 1.2:-32532555 | MS.gene068226:CDS |
ATATAAAGGATGATTTCATT+TGG | 0.370033 | 1.2:+32531927 | None:intergenic |
ATAGGTGTCACCACCCGAAT+AGG | 0.370547 | 1.2:+32532133 | None:intergenic |
TATAAAGGATGATTTCATTT+GGG | 0.376053 | 1.2:+32531928 | None:intergenic |
ACCTGCAATATAACCCTAAC+AGG | 0.380684 | 1.2:+32532511 | None:intergenic |
GGGTAAAGGGGAGGGTTCTT+TGG | 0.380696 | 1.2:-32532704 | MS.gene068226:CDS |
TCTGGTTGTTTGCTTTATGA+AGG | 0.381509 | 1.2:-32532634 | MS.gene068226:CDS |
AATTTGCTACTGTGGTTCAT+TGG | 0.383046 | 1.2:-32531358 | MS.gene068226:CDS |
TGAATGCGGGGAGTCCTGTT+AGG | 0.386175 | 1.2:-32532525 | MS.gene068226:CDS |
GCAAAGAAAAGTTCCCTATT+CGG | 0.386328 | 1.2:-32532147 | MS.gene068226:CDS |
CGACACCGTCCCTTGTATTA+GGG | 0.401197 | 1.2:+32532599 | None:intergenic |
TCTTATTCATACATATATGA+TGG | 0.403540 | 1.2:-32532445 | MS.gene068226:CDS |
TTGGTGACCAATTTCAATAT+AGG | 0.405625 | 1.2:-32532783 | MS.gene068226:CDS |
CAAAGAAAAGTTCCCTATTC+GGG | 0.406699 | 1.2:-32532146 | MS.gene068226:CDS |
GCGAATGTTATGAAGTCTTC+TGG | 0.411419 | 1.2:-32532652 | MS.gene068226:CDS |
GATGAGTATACAATTAATAT+AGG | 0.418381 | 1.2:-32531692 | MS.gene068226:intron |
AGGGCCACACTCATATATAA+AGG | 0.421860 | 1.2:+32531913 | None:intergenic |
TCATGTGGTATCGATTATTT+GGG | 0.431263 | 1.2:-32532724 | MS.gene068226:CDS |
AAGACGAATCGTTCAATACT+AGG | 0.431282 | 1.2:-32532055 | MS.gene068226:CDS |
ACATCTTTCACAACTAGGTT+AGG | 0.431941 | 1.2:+32531507 | None:intergenic |
CAAAATGTTGTTTGCTACAA+AGG | 0.440548 | 1.2:-32531451 | MS.gene068226:CDS |
GAGCTCACACACAAAGCTTC+CGG | 0.447492 | 1.2:+32531769 | None:intergenic |
GAAAACACCGGAAAGAGAAT+AGG | 0.449177 | 1.2:-32532826 | MS.gene068226:CDS |
AGGGCCGAACTTATTGTAAT+CGG | 0.452930 | 1.2:-32532763 | MS.gene068226:CDS |
AAAACACCGGAAAGAGAATA+GGG | 0.465297 | 1.2:-32532825 | MS.gene068226:CDS |
GATTATTTGGGTAAAGGGGA+GGG | 0.467741 | 1.2:-32532712 | MS.gene068226:CDS |
AATCTTCAAAACAAAATTGA+AGG | 0.468829 | 1.2:-32531825 | MS.gene068226:CDS |
AAGAGAATAGGGCATGTAGA+TGG | 0.472138 | 1.2:-32532814 | MS.gene068226:CDS |
GGTATCGATTATTTGGGTAA+AGG | 0.478346 | 1.2:-32532718 | MS.gene068226:CDS |
GACAATGTGACTCGAGTAAG+AGG | 0.478502 | 1.2:-32532409 | MS.gene068226:CDS |
TTATGAAGGCGAAACGTCAA+TGG | 0.484134 | 1.2:-32532849 | MS.gene068226:CDS |
TTCAAGTTGGAACTGAATAC+CGG | 0.487311 | 1.2:+32531847 | None:intergenic |
TAGGTGTCACCACCCGAATA+GGG | 0.488457 | 1.2:+32532134 | None:intergenic |
TACCACATGAGTGTTGTTGA+TGG | 0.494297 | 1.2:+32532737 | None:intergenic |
TAAGAAAATTCAGGACCAAC+CGG | 0.497017 | 1.2:-32532353 | MS.gene068226:CDS |
CTTATTCATACATATATGAT+GGG | 0.498680 | 1.2:-32532444 | MS.gene068226:CDS |
ATTGATTCGAACAACATCCT+TGG | 0.502629 | 1.2:+32532183 | None:intergenic |
CGATTATTTGGGTAAAGGGG+AGG | 0.503266 | 1.2:-32532713 | MS.gene068226:CDS |
AGCTTTGTGTGTGAGCTCAT+TGG | 0.503294 | 1.2:-32531764 | MS.gene068226:CDS |
TTCATTGATGCAACGCGACA+TGG | 0.503420 | 1.2:-32531564 | MS.gene068226:CDS |
ACATAACATCTTTCACAACT+AGG | 0.508844 | 1.2:+32531502 | None:intergenic |
CAAAACAAAATTGAAGGGGT+GGG | 0.513316 | 1.2:-32531819 | MS.gene068226:CDS |
ATGGACAAATCTACATTTGA+AGG | 0.517049 | 1.2:-32531329 | None:intergenic |
ACGAGGAACACAAGCAAGAA+GGG | 0.521209 | 1.2:+32531894 | None:intergenic |
ATCAGCCGAGTGAGTCAATC+CGG | 0.522206 | 1.2:-32531866 | MS.gene068226:CDS |
GACGAGGAACACAAGCAAGA+AGG | 0.525389 | 1.2:+32531893 | None:intergenic |
ACACGCTCTTTCATTCCATC+CGG | 0.526296 | 1.2:-32531788 | MS.gene068226:CDS |
AAACATTCTTTGGGAGAACA+TGG | 0.531170 | 1.2:+32532272 | None:intergenic |
CATGTAGATGGAATTGAAGT+TGG | 0.532327 | 1.2:-32532802 | MS.gene068226:CDS |
TTGAGTAAAATTTGCTACTG+TGG | 0.533623 | 1.2:-32531366 | MS.gene068226:CDS |
GAATGCGGGGAGTCCTGTTA+GGG | 0.541817 | 1.2:-32532524 | MS.gene068226:CDS |
GAGACCGATTACAATAAGTT+CGG | 0.543201 | 1.2:+32532759 | None:intergenic |
GCAACGCGACATGGAAACAT+TGG | 0.543624 | 1.2:-32531555 | MS.gene068226:CDS |
TCAAAACAAAATTGAAGGGG+TGG | 0.543766 | 1.2:-32531820 | MS.gene068226:CDS |
ATCTTCAAAACAAAATTGAA+GGG | 0.544882 | 1.2:-32531824 | MS.gene068226:CDS |
CGCGCCAATTTCTGATCATG+AGG | 0.548143 | 1.2:+32532574 | None:intergenic |
TATGAAGGCGAAACGTCAAT+GGG | 0.552062 | 1.2:-32532848 | MS.gene068226:CDS |
AAAACAAAATTGAAGGGGTG+GGG | 0.557230 | 1.2:-32531818 | MS.gene068226:CDS |
TAGAGGTCTTGTTCTCTCCA+AGG | 0.558562 | 1.2:-32532200 | MS.gene068226:CDS |
TCTATGAGTTACAACAATGC+TGG | 0.561265 | 1.2:+32532678 | None:intergenic |
TTTGCATAGCTAAGAATGGC+GGG | 0.567635 | 1.2:-32531985 | MS.gene068226:CDS |
GTGGAGATACCTAAACCCTT+CGG | 0.568688 | 1.2:-32532103 | MS.gene068226:CDS |
GGCGGGACATTAGCCTATGA+TGG | 0.570158 | 1.2:-32531968 | MS.gene068226:CDS |
CGCGACATGGAAACATTGGA+AGG | 0.575552 | 1.2:-32531551 | MS.gene068226:CDS |
TGTTTGCTTTATGAAGGTCA+TGG | 0.576682 | 1.2:-32532628 | MS.gene068226:CDS |
TTGGTTTCCATAACATCTCG+AGG | 0.577098 | 1.2:+32532247 | None:intergenic |
CGAATCAATGATATTTCGGA+GGG | 0.577253 | 1.2:-32532169 | MS.gene068226:CDS |
ATGGTGGTAACCCTAATACA+AGG | 0.577358 | 1.2:-32532609 | MS.gene068226:CDS |
CAGAAGAGACACAATTCTGA+AGG | 0.581158 | 1.2:-32532295 | MS.gene068226:CDS |
TTGCTGCAAGGTGAACATCA+AGG | 0.582980 | 1.2:-32531391 | MS.gene068226:CDS |
TAACTCAGCTCTCTACCTGC+GGG | 0.583390 | 1.2:+32531423 | None:intergenic |
AATCGTTCAATACTAGGTGG+TGG | 0.591568 | 1.2:-32532049 | MS.gene068226:CDS |
TTGTGGAATAGTATGAATGC+GGG | 0.595742 | 1.2:-32532538 | MS.gene068226:CDS |
CATATTGACTAGGTAACCGA+AGG | 0.601280 | 1.2:+32532087 | None:intergenic |
AAAGTTCCCAAAACATCTCG+AGG | 0.611731 | 1.2:+32532319 | None:intergenic |
TCTCGAGGGGAAACACTAGC+CGG | 0.615076 | 1.2:+32532334 | None:intergenic |
TGTGGTTCATTGGAATGCAA+TGG | 0.618637 | 1.2:-32531348 | MS.gene068226:CDS |
TTGGATAAGTCATATTGACT+AGG | 0.621126 | 1.2:+32532077 | None:intergenic |
TGTGTTTGCATAGCTAAGAA+TGG | 0.625244 | 1.2:-32531989 | MS.gene068226:CDS |
TATCGATTATTTGGGTAAAG+GGG | 0.626149 | 1.2:-32532716 | MS.gene068226:CDS |
TCTTCAAAACAAAATTGAAG+GGG | 0.626316 | 1.2:-32531823 | MS.gene068226:CDS |
TCGAATCAATGATATTTCGG+AGG | 0.627900 | 1.2:-32532170 | MS.gene068226:CDS |
AAGTTCCCAAAACATCTCGA+GGG | 0.630440 | 1.2:+32532320 | None:intergenic |
GAGGGGAAACACTAGCCGGT+TGG | 0.631704 | 1.2:+32532338 | None:intergenic |
ATAACTCAGCTCTCTACCTG+CGG | 0.634593 | 1.2:+32531422 | None:intergenic |
CACTCGGCTGATGCAAGACG+AGG | 0.637041 | 1.2:+32531877 | None:intergenic |
TCATCCTTTATATATGAGTG+TGG | 0.641509 | 1.2:-32531917 | MS.gene068226:CDS |
GGTGACACCTATAAGCTATG+TGG | 0.646281 | 1.2:-32532122 | MS.gene068226:CDS |
GGTAACCCTAATACAAGGGA+CGG | 0.650433 | 1.2:-32532604 | MS.gene068226:CDS |
GCTACAAAGGACATACCCGC+AGG | 0.652394 | 1.2:-32531438 | MS.gene068226:CDS |
TGGTGGTAACCCTAATACAA+GGG | 0.655937 | 1.2:-32532608 | MS.gene068226:CDS |
CTCCATCAACAACACTCATG+TGG | 0.665071 | 1.2:-32532739 | MS.gene068226:CDS |
AGTTCCCAAAACATCTCGAG+GGG | 0.671999 | 1.2:+32532321 | None:intergenic |
GAATACCGGATTGACTCACT+CGG | 0.672661 | 1.2:+32531861 | None:intergenic |
ATATTGACTAGGTAACCGAA+GGG | 0.676746 | 1.2:+32532088 | None:intergenic |
TCACACACAAAGCTTCCGGA+TGG | 0.681981 | 1.2:+32531773 | None:intergenic |
AGAAAAGTTCCCTATTCGGG+TGG | 0.682829 | 1.2:-32532143 | MS.gene068226:CDS |
AAACGTCAATGGGAAAACAC+CGG | 0.685237 | 1.2:-32532838 | MS.gene068226:CDS |
TGTGGAATAGTATGAATGCG+GGG | 0.700340 | 1.2:-32532537 | MS.gene068226:CDS |
CATGATCAGAAATTGGCGCG+CGG | 0.700635 | 1.2:-32532571 | MS.gene068226:CDS |
TTTGTGGAATAGTATGAATG+CGG | 0.704358 | 1.2:-32532539 | MS.gene068226:CDS |
TTGCTTTATGAAGGTCATGG+TGG | 0.708605 | 1.2:-32532625 | MS.gene068226:CDS |
GTTTGCATAGCTAAGAATGG+CGG | 0.718623 | 1.2:-32531986 | MS.gene068226:CDS |
TTATGATTACAATTGCTGCA+AGG | 0.726923 | 1.2:-32531403 | MS.gene068226:CDS |
ACGAATCGTTCAATACTAGG+TGG | 0.736474 | 1.2:-32532052 | MS.gene068226:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATCTTCAAAACAAAATTGA+AGG | - | chr1.2:32532354-32532373 | MS.gene068226:CDS | 20.0% |
!! | ATATAAAGGATGATTTCATT+TGG | + | chr1.2:32532255-32532274 | None:intergenic | 20.0% |
!! | ATCTTCAAAACAAAATTGAA+GGG | - | chr1.2:32532355-32532374 | MS.gene068226:CDS | 20.0% |
!! | CTTATTCATACATATATGAT+GGG | - | chr1.2:32531735-32531754 | MS.gene068226:CDS | 20.0% |
!! | GATGAGTATACAATTAATAT+AGG | - | chr1.2:32532487-32532506 | MS.gene068226:CDS | 20.0% |
!! | TATAAAGGATGATTTCATTT+GGG | + | chr1.2:32532254-32532273 | None:intergenic | 20.0% |
!! | TCTTATTCATACATATATGA+TGG | - | chr1.2:32531734-32531753 | MS.gene068226:CDS | 20.0% |
! | TCTTCAAAACAAAATTGAAG+GGG | - | chr1.2:32532356-32532375 | MS.gene068226:CDS | 25.0% |
! | TGTTCGAATCAATGATATTT+CGG | - | chr1.2:32532006-32532025 | MS.gene068226:CDS | 25.0% |
!! | TGATGTTTTATGCATTTTGT+AGG | - | chr1.2:32532576-32532595 | MS.gene068226:CDS | 25.0% |
!!! | TTGTTTTGAAGATTTCAAGT+TGG | + | chr1.2:32532348-32532367 | None:intergenic | 25.0% |
ACATAACATCTTTCACAACT+AGG | + | chr1.2:32532680-32532699 | None:intergenic | 30.0% | |
CATCTCAACAACAAAAAAGT+TGG | - | chr1.2:32532448-32532467 | MS.gene068226:CDS | 30.0% | |
GTTTGTGCTTAAGAAAATTC+AGG | - | chr1.2:32531817-32531836 | MS.gene068226:CDS | 30.0% | |
TCATCCTTTATATATGAGTG+TGG | - | chr1.2:32532262-32532281 | MS.gene068226:CDS | 30.0% | |
TGGTGACCAATTTCAATATA+GGG | - | chr1.2:32531397-32531416 | MS.gene068226:CDS | 30.0% | |
TTATGATTACAATTGCTGCA+AGG | - | chr1.2:32532776-32532795 | MS.gene068226:CDS | 30.0% | |
TTTGTGGAATAGTATGAATG+CGG | - | chr1.2:32531640-32531659 | MS.gene068226:intron | 30.0% | |
! | AAGTTTTCTGTTACCATCAT+AGG | + | chr1.2:32532227-32532246 | None:intergenic | 30.0% |
! | CAAAATGTTGTTTGCTACAA+AGG | - | chr1.2:32532728-32532747 | MS.gene068226:CDS | 30.0% |
! | CTCTAGACATTTGTCTTTTT+CGG | + | chr1.2:32531964-32531983 | None:intergenic | 30.0% |
! | TATCGATTATTTGGGTAAAG+GGG | - | chr1.2:32531463-32531482 | MS.gene068226:CDS | 30.0% |
! | TGTAGCAAACAACATTTTGT+GGG | + | chr1.2:32532727-32532746 | None:intergenic | 30.0% |
! | TTCTGAAAAATCTGAAGTGA+TGG | - | chr1.2:32531691-32531710 | MS.gene068226:intron | 30.0% |
! | TTGGATAAGTCATATTGACT+AGG | + | chr1.2:32532105-32532124 | None:intergenic | 30.0% |
! | TTGGTGACCAATTTCAATAT+AGG | - | chr1.2:32531396-32531415 | MS.gene068226:CDS | 30.0% |
! | TTGTAGCAAACAACATTTTG+TGG | + | chr1.2:32532728-32532747 | None:intergenic | 30.0% |
!! | GTATCGATTATTTGGGTAAA+GGG | - | chr1.2:32531462-32531481 | MS.gene068226:CDS | 30.0% |
!! | TCATGTGGTATCGATTATTT+GGG | - | chr1.2:32531455-32531474 | MS.gene068226:CDS | 30.0% |
!! | TTGAGTAAAATTTGCTACTG+TGG | - | chr1.2:32532813-32532832 | MS.gene068226:CDS | 30.0% |
!!! | ATATGATGGGTTGTATTTTG+TGG | - | chr1.2:32531748-32531767 | MS.gene068226:CDS | 30.0% |
!!! | TTGTCTTTTTCGGAAAGTTT+TGG | + | chr1.2:32531954-32531973 | None:intergenic | 30.0% |
AAAACAAAATTGAAGGGGTG+GGG | - | chr1.2:32532361-32532380 | MS.gene068226:CDS | 35.0% | |
AAAACACCGGAAAGAGAATA+GGG | - | chr1.2:32531354-32531373 | MS.gene068226:CDS | 35.0% | |
AAGACGAATCGTTCAATACT+AGG | - | chr1.2:32532124-32532143 | MS.gene068226:CDS | 35.0% | |
ACATCTTTCACAACTAGGTT+AGG | + | chr1.2:32532675-32532694 | None:intergenic | 35.0% | |
CAAAACAAAATTGAAGGGGT+GGG | - | chr1.2:32532360-32532379 | MS.gene068226:CDS | 35.0% | |
CAAAGAAAAGTTCCCTATTC+GGG | - | chr1.2:32532033-32532052 | MS.gene068226:CDS | 35.0% | |
CATGTAGATGGAATTGAAGT+TGG | - | chr1.2:32531377-32531396 | MS.gene068226:CDS | 35.0% | |
CGAAAAAGACAAATGTCTAG+AGG | - | chr1.2:32531962-32531981 | MS.gene068226:CDS | 35.0% | |
CGAATCAATGATATTTCGGA+GGG | - | chr1.2:32532010-32532029 | MS.gene068226:CDS | 35.0% | |
CTCGAGGAAAAACATTCTTT+GGG | + | chr1.2:32531919-32531938 | None:intergenic | 35.0% | |
GAGACCGATTACAATAAGTT+CGG | + | chr1.2:32531423-32531442 | None:intergenic | 35.0% | |
GCAAAGAAAAGTTCCCTATT+CGG | - | chr1.2:32532032-32532051 | MS.gene068226:CDS | 35.0% | |
TAAGAAAATTCAGGACCAAC+CGG | - | chr1.2:32531826-32531845 | MS.gene068226:CDS | 35.0% | |
TCAAAACAAAATTGAAGGGG+TGG | - | chr1.2:32532359-32532378 | MS.gene068226:CDS | 35.0% | |
TCGAATCAATGATATTTCGG+AGG | - | chr1.2:32532009-32532028 | MS.gene068226:CDS | 35.0% | |
TCTATGAGTTACAACAATGC+TGG | + | chr1.2:32531504-32531523 | None:intergenic | 35.0% | |
TCTCGAGGAAAAACATTCTT+TGG | + | chr1.2:32531920-32531939 | None:intergenic | 35.0% | |
TCTGGTTGTTTGCTTTATGA+AGG | - | chr1.2:32531545-32531564 | MS.gene068226:CDS | 35.0% | |
TGTGTTTGCATAGCTAAGAA+TGG | - | chr1.2:32532190-32532209 | MS.gene068226:CDS | 35.0% | |
TGTTTGCTTTATGAAGGTCA+TGG | - | chr1.2:32531551-32531570 | MS.gene068226:CDS | 35.0% | |
TTGTGGAATAGTATGAATGC+GGG | - | chr1.2:32531641-32531660 | MS.gene068226:intron | 35.0% | |
! | AAACATTCTTTGGGAGAACA+TGG | + | chr1.2:32531910-32531929 | None:intergenic | 35.0% |
! | AGTATTGAACGATTCGTCTT+TGG | + | chr1.2:32532124-32532143 | None:intergenic | 35.0% |
! | ATATTGACTAGGTAACCGAA+GGG | + | chr1.2:32532094-32532113 | None:intergenic | 35.0% |
! | GTAGCAAACAACATTTTGTG+GGG | + | chr1.2:32532726-32532745 | None:intergenic | 35.0% |
! | TGTTTTTCCTCGAGATGTTA+TGG | - | chr1.2:32531925-32531944 | MS.gene068226:CDS | 35.0% |
!! | AATTTGCTACTGTGGTTCAT+TGG | - | chr1.2:32532821-32532840 | MS.gene068226:CDS | 35.0% |
!! | ATTGATTCGAACAACATCCT+TGG | + | chr1.2:32531999-32532018 | None:intergenic | 35.0% |
!! | CTCATGTGGTATCGATTATT+TGG | - | chr1.2:32531454-32531473 | MS.gene068226:CDS | 35.0% |
!! | GGTATCGATTATTTGGGTAA+AGG | - | chr1.2:32531461-32531480 | MS.gene068226:CDS | 35.0% |
!! | TTCAAGTTGGAACTGAATAC+CGG | + | chr1.2:32532335-32532354 | None:intergenic | 35.0% |
AAACGTCAATGGGAAAACAC+CGG | - | chr1.2:32531341-32531360 | MS.gene068226:CDS | 40.0% | |
AAAGTTCCCAAAACATCTCG+AGG | + | chr1.2:32531863-32531882 | None:intergenic | 40.0% | |
AAGAGAATAGGGCATGTAGA+TGG | - | chr1.2:32531365-32531384 | MS.gene068226:CDS | 40.0% | |
AAGTTCCCAAAACATCTCGA+GGG | + | chr1.2:32531862-32531881 | None:intergenic | 40.0% | |
AATCGTTCAATACTAGGTGG+TGG | - | chr1.2:32532130-32532149 | MS.gene068226:CDS | 40.0% | |
ACCTGCAATATAACCCTAAC+AGG | + | chr1.2:32531671-32531690 | None:intergenic | 40.0% | |
ACGAATCGTTCAATACTAGG+TGG | - | chr1.2:32532127-32532146 | MS.gene068226:CDS | 40.0% | |
ACTCGAGTAAGAGGACAATT+TGG | - | chr1.2:32531779-32531798 | MS.gene068226:CDS | 40.0% | |
AGGGCCACACTCATATATAA+AGG | + | chr1.2:32532269-32532288 | None:intergenic | 40.0% | |
AGGGCCGAACTTATTGTAAT+CGG | - | chr1.2:32531416-32531435 | MS.gene068226:CDS | 40.0% | |
ATGGTGGTAACCCTAATACA+AGG | - | chr1.2:32531570-32531589 | MS.gene068226:CDS | 40.0% | |
CAGAAGAGACACAATTCTGA+AGG | - | chr1.2:32531884-32531903 | MS.gene068226:CDS | 40.0% | |
CTTCAGAATTGTGTCTCTTC+TGG | + | chr1.2:32531886-32531905 | None:intergenic | 40.0% | |
GAAAACACCGGAAAGAGAAT+AGG | - | chr1.2:32531353-32531372 | MS.gene068226:CDS | 40.0% | |
GATTATTTGGGTAAAGGGGA+GGG | - | chr1.2:32531467-32531486 | MS.gene068226:CDS | 40.0% | |
GCGAATGTTATGAAGTCTTC+TGG | - | chr1.2:32531527-32531546 | MS.gene068226:CDS | 40.0% | |
GGTATCTCCACATAGCTTAT+AGG | + | chr1.2:32532067-32532086 | None:intergenic | 40.0% | |
GTTCGGCCCTATATTGAAAT+TGG | + | chr1.2:32531406-32531425 | None:intergenic | 40.0% | |
GTTTGCATAGCTAAGAATGG+CGG | - | chr1.2:32532193-32532212 | MS.gene068226:CDS | 40.0% | |
TACATGCCCTATTCTCTTTC+CGG | + | chr1.2:32531363-32531382 | None:intergenic | 40.0% | |
TCCTGTTAGGGTTATATTGC+AGG | - | chr1.2:32531667-32531686 | MS.gene068226:intron | 40.0% | |
TGGTGGTAACCCTAATACAA+GGG | - | chr1.2:32531571-32531590 | MS.gene068226:CDS | 40.0% | |
TGTGGAATAGTATGAATGCG+GGG | - | chr1.2:32531642-32531661 | MS.gene068226:intron | 40.0% | |
TGTGGTTCATTGGAATGCAA+TGG | - | chr1.2:32532831-32532850 | MS.gene068226:CDS | 40.0% | |
TTGCTTTATGAAGGTCATGG+TGG | - | chr1.2:32531554-32531573 | MS.gene068226:CDS | 40.0% | |
TTGGTTTCCATAACATCTCG+AGG | + | chr1.2:32531935-32531954 | None:intergenic | 40.0% | |
TTTGCATAGCTAAGAATGGC+GGG | - | chr1.2:32532194-32532213 | MS.gene068226:CDS | 40.0% | |
! | ATGCATTTTGTAGGTGCTTC+TGG | - | chr1.2:32532585-32532604 | MS.gene068226:CDS | 40.0% |
! | CATATTGACTAGGTAACCGA+AGG | + | chr1.2:32532095-32532114 | None:intergenic | 40.0% |
! | TACCACATGAGTGTTGTTGA+TGG | + | chr1.2:32531445-32531464 | None:intergenic | 40.0% |
ACACGCTCTTTCATTCCATC+CGG | - | chr1.2:32532391-32532410 | MS.gene068226:CDS | 45.0% | |
ACGAGGAACACAAGCAAGAA+GGG | + | chr1.2:32532288-32532307 | None:intergenic | 45.0% | |
ACTAGGTAACCGAAGGGTTT+AGG | + | chr1.2:32532088-32532107 | None:intergenic | 45.0% | |
AGAAAAGTTCCCTATTCGGG+TGG | - | chr1.2:32532036-32532055 | MS.gene068226:CDS | 45.0% | |
AGTTCCCAAAACATCTCGAG+GGG | + | chr1.2:32531861-32531880 | None:intergenic | 45.0% | |
ATAACTCAGCTCTCTACCTG+CGG | + | chr1.2:32532760-32532779 | None:intergenic | 45.0% | |
CGATTATTTGGGTAAAGGGG+AGG | - | chr1.2:32531466-32531485 | MS.gene068226:CDS | 45.0% | |
CTCCATCAACAACACTCATG+TGG | - | chr1.2:32531440-32531459 | MS.gene068226:CDS | 45.0% | |
GACAATGTGACTCGAGTAAG+AGG | - | chr1.2:32531770-32531789 | MS.gene068226:CDS | 45.0% | |
GGTAACCCTAATACAAGGGA+CGG | - | chr1.2:32531575-32531594 | MS.gene068226:CDS | 45.0% | |
GGTGACACCTATAAGCTATG+TGG | - | chr1.2:32532057-32532076 | MS.gene068226:CDS | 45.0% | |
GTGGAGATACCTAAACCCTT+CGG | - | chr1.2:32532076-32532095 | MS.gene068226:CDS | 45.0% | |
TTCATTGATGCAACGCGACA+TGG | - | chr1.2:32532615-32532634 | MS.gene068226:CDS | 45.0% | |
TTGCTGCAAGGTGAACATCA+AGG | - | chr1.2:32532788-32532807 | MS.gene068226:CDS | 45.0% | |
! | AGCTTTGTGTGTGAGCTCAT+TGG | - | chr1.2:32532415-32532434 | MS.gene068226:CDS | 45.0% |
! | GAATACCGGATTGACTCACT+CGG | + | chr1.2:32532321-32532340 | None:intergenic | 45.0% |
! | GTTTCCCCTCGAGATGTTTT+GGG | - | chr1.2:32531854-32531873 | MS.gene068226:CDS | 45.0% |
! | TGTTTCCCCTCGAGATGTTT+TGG | - | chr1.2:32531853-32531872 | MS.gene068226:CDS | 45.0% |
! | TTTTGTAGGTGCTTCTGGCA+AGG | - | chr1.2:32532590-32532609 | MS.gene068226:CDS | 45.0% |
!! | TAGAGGTCTTGTTCTCTCCA+AGG | - | chr1.2:32531979-32531998 | MS.gene068226:CDS | 45.0% |
ATCAGCCGAGTGAGTCAATC+CGG | - | chr1.2:32532313-32532332 | MS.gene068226:CDS | 50.0% | |
CATGATCAGAAATTGGCGCG+CGG | - | chr1.2:32531608-32531627 | MS.gene068226:intron | 50.0% | |
CGACACCGTCCCTTGTATTA+GGG | + | chr1.2:32531583-32531602 | None:intergenic | 50.0% | |
CGCGACATGGAAACATTGGA+AGG | - | chr1.2:32532628-32532647 | MS.gene068226:CDS | 50.0% | |
CGCGCCAATTTCTGATCATG+AGG | + | chr1.2:32531608-32531627 | None:intergenic | 50.0% | |
CGCGCCTCATGATCAGAAAT+TGG | - | chr1.2:32531601-32531620 | MS.gene068226:intron | 50.0% | |
GACGAGGAACACAAGCAAGA+AGG | + | chr1.2:32532289-32532308 | None:intergenic | 50.0% | |
GAGCTCACACACAAAGCTTC+CGG | + | chr1.2:32532413-32532432 | None:intergenic | 50.0% | |
GCAACGCGACATGGAAACAT+TGG | - | chr1.2:32532624-32532643 | MS.gene068226:CDS | 50.0% | |
TAACTCAGCTCTCTACCTGC+GGG | + | chr1.2:32532759-32532778 | None:intergenic | 50.0% | |
TCACACACAAAGCTTCCGGA+TGG | + | chr1.2:32532409-32532428 | None:intergenic | 50.0% | |
! | ATAGGTGTCACCACCCGAAT+AGG | + | chr1.2:32532049-32532068 | None:intergenic | 50.0% |
! | TAGGTGTCACCACCCGAATA+GGG | + | chr1.2:32532048-32532067 | None:intergenic | 50.0% |
CGCGCGGAAATCTTGCTTTG+TGG | - | chr1.2:32531624-32531643 | MS.gene068226:intron | 55.0% | |
GAATGCGGGGAGTCCTGTTA+GGG | - | chr1.2:32531655-32531674 | MS.gene068226:intron | 55.0% | |
GCGACACCGTCCCTTGTATT+AGG | + | chr1.2:32531584-32531603 | None:intergenic | 55.0% | |
GCTACAAAGGACATACCCGC+AGG | - | chr1.2:32532741-32532760 | MS.gene068226:CDS | 55.0% | |
GGGTAAAGGGGAGGGTTCTT+TGG | - | chr1.2:32531475-32531494 | MS.gene068226:CDS | 55.0% | |
TCTCGAGGGGAAACACTAGC+CGG | + | chr1.2:32531848-32531867 | None:intergenic | 55.0% | |
TGAATGCGGGGAGTCCTGTT+AGG | - | chr1.2:32531654-32531673 | MS.gene068226:intron | 55.0% | |
! | GGCGGGACATTAGCCTATGA+TGG | - | chr1.2:32532211-32532230 | MS.gene068226:CDS | 55.0% |
CACTCGGCTGATGCAAGACG+AGG | + | chr1.2:32532305-32532324 | None:intergenic | 60.0% | |
GAGGGGAAACACTAGCCGGT+TGG | + | chr1.2:32531844-32531863 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.2 | gene | 32531332 | 32532869 | 32531332 | ID=MS.gene068226 |
chr1.2 | mRNA | 32531332 | 32532869 | 32531332 | ID=MS.gene068226.t1;Parent=MS.gene068226 |
chr1.2 | exon | 32531693 | 32532869 | 32531693 | ID=MS.gene068226.t1.exon1;Parent=MS.gene068226.t1 |
chr1.2 | CDS | 32531693 | 32532869 | 32531693 | ID=cds.MS.gene068226.t1;Parent=MS.gene068226.t1 |
chr1.2 | exon | 32531332 | 32531603 | 32531332 | ID=MS.gene068226.t1.exon2;Parent=MS.gene068226.t1 |
chr1.2 | CDS | 32531332 | 32531603 | 32531332 | ID=cds.MS.gene068226.t1;Parent=MS.gene068226.t1 |
Gene Sequence |
Protein sequence |