AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene050020


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene050020.t1 MTR_5g065440 96.283 269 7 2 1 267 1 268 0.0 531
MS.gene050020.t1 MTR_3g100650 59.450 291 77 7 1 267 1 274 4.79e-95 281
MS.gene050020.t1 MTR_5g032600 51.542 227 76 8 49 267 72 272 2.34e-56 182
MS.gene050020.t1 MTR_4g134580 41.700 247 94 6 58 266 112 346 9.05e-51 170
MS.gene050020.t1 MTR_1g077020 41.509 212 92 5 56 266 6 186 1.06e-47 157
MS.gene050020.t1 MTR_2g076780 41.038 212 109 4 59 266 37 236 1.07e-46 156
MS.gene050020.t1 MTR_7g010300 40.724 221 98 6 56 266 85 282 2.09e-44 153
MS.gene050020.t1 MTR_5g020510 39.819 221 106 6 54 266 94 295 6.46e-44 150
MS.gene050020.t1 MTR_8g069080 42.326 215 103 7 58 266 68 267 1.48e-43 149
MS.gene050020.t1 MTR_6g012280 42.857 210 102 5 59 266 91 284 1.39e-40 143
MS.gene050020.t1 MTR_7g070643 78.947 76 13 1 22 97 48 120 7.45e-34 121
MS.gene050020.t1 MTR_6g080300 85.246 61 9 0 37 97 32 92 4.41e-30 108
MS.gene050020.t1 MTR_8g069380 47.872 94 49 0 174 267 22 115 3.28e-22 89.0
MS.gene050020.t1 MTR_8g051480 54.667 75 33 1 192 266 55 128 1.96e-20 84.7
MS.gene050020.t1 MTR_3g039810 57.534 73 24 2 57 129 18 83 2.01e-20 83.6
MS.gene050020.t1 MTR_6g073013 53.333 60 27 1 204 262 101 160 1.78e-16 75.5
MS.gene050020.t1 MTR_6g073013 56.000 50 21 1 59 107 19 68 1.96e-11 61.6
MS.gene050020.t1 MTR_6g012220 56.604 53 19 1 55 107 17 65 6.80e-13 63.2
MS.gene050020.t1 MTR_2g007810 100.000 29 0 0 69 97 19 47 8.45e-13 63.2
MS.gene050020.t1 MTR_8g467340 54.545 55 23 1 56 108 61 115 1.56e-12 67.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene050020.t1 AT4G24660 48.289 263 88 7 7 267 4 220 3.08e-65 203
MS.gene050020.t1 AT4G24660 47.893 261 84 8 7 263 4 216 2.97e-62 196
MS.gene050020.t1 AT2G02540 38.868 265 123 7 18 266 43 284 6.10e-58 187
MS.gene050020.t1 AT2G02540 38.868 265 123 7 18 266 43 284 6.10e-58 187
MS.gene050020.t1 AT1G14440 40.654 214 102 4 57 266 88 280 9.77e-52 171
MS.gene050020.t1 AT1G14440 40.654 214 102 4 57 266 88 280 9.77e-52 171
MS.gene050020.t1 AT5G65410 43.519 216 87 3 55 267 71 254 3.40e-49 164
MS.gene050020.t1 AT2G18350 41.981 212 90 4 57 266 80 260 2.50e-47 158
MS.gene050020.t1 AT1G75240 40.693 231 118 2 56 267 73 303 8.34e-47 159
MS.gene050020.t1 AT3G50890 40.566 212 94 3 58 265 59 242 1.92e-43 148
MS.gene050020.t1 AT1G69600 40.376 213 95 5 57 263 29 215 6.34e-38 134
MS.gene050020.t1 AT5G15210 36.530 219 93 5 54 260 51 235 1.02e-36 131
MS.gene050020.t1 AT5G39760 36.667 210 128 2 59 266 56 262 1.24e-35 130
MS.gene050020.t1 AT3G28920 36.916 214 116 4 57 263 50 251 3.68e-35 128
MS.gene050020.t1 AT5G60480 38.164 207 89 7 56 260 34 203 1.00e-30 114
MS.gene050020.t1 AT1G74660 67.647 68 20 1 55 122 35 100 1.65e-24 94.7
MS.gene050020.t1 AT1G74660 71.667 60 17 0 55 114 35 94 1.75e-24 94.4
MS.gene050020.t1 AT3G28917 65.217 69 21 2 56 123 30 96 1.38e-23 92.4
MS.gene050020.t1 AT1G18835 63.793 58 18 1 57 114 24 78 5.48e-19 79.7
MS.gene050020.t1 AT5G42780 36.232 69 44 0 195 263 170 238 6.61e-11 61.2
MS.gene050020.t1 AT5G42780 57.692 52 18 2 59 109 64 112 7.79e-11 61.2

Find 79 sgRNAs with CRISPR-Local

Find 84 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGCACTGGTGTTTGTGTTTC+TGG 0.083748 5.4:-51440483 None:intergenic
AGAGAAATGTTCTTAAAGTT+TGG 0.256503 5.4:+51441180 MS.gene050020:CDS
GCTCTCCCTGCTGCTGCTTC+CGG 0.319955 5.4:+51440936 MS.gene050020:CDS
GGTGGTGGTGGTAGCGGTGG+TGG 0.325308 5.4:+51441017 MS.gene050020:CDS
CCTGCTGCTGCTTCCGGTGG+TGG 0.355404 5.4:+51440942 MS.gene050020:CDS
TCTCCTTGCGGTGGAAGTTC+CGG 0.388446 5.4:-51440740 None:intergenic
GTGGAGGTGGTGGCTGTGAC+CGG 0.391995 5.4:-51440791 None:intergenic
TGGTATTGCGGCGGTGGAGG+TGG 0.407593 5.4:-51440804 None:intergenic
CCACCACCGGAAGCAGCAGC+AGG 0.427582 5.4:-51440942 None:intergenic
TGATGGTATTGCGGCGGTGG+AGG 0.428238 5.4:-51440807 None:intergenic
AAGAATCACGCCGTTAGCTT+CGG 0.428386 5.4:+51440627 MS.gene050020:CDS
TTTATCGCTGCCGGTGAAGA+AGG 0.429195 5.4:+51440678 MS.gene050020:CDS
TGGTGATGGTATTGCGGCGG+TGG 0.436665 5.4:-51440810 None:intergenic
GGTGGTGGTAGCGGTGGTGG+TGG 0.439608 5.4:+51441020 MS.gene050020:CDS
AGTAGCGGTGGAGGTGGTGG+TGG 0.442408 5.4:+51441002 MS.gene050020:CDS
TATTGCGGCGGTGGAGGTGG+TGG 0.444382 5.4:-51440801 None:intergenic
AGCAGTAGCGGTGGAGGTGG+TGG 0.444551 5.4:+51440999 MS.gene050020:CDS
TTCGGTGGCCATGCTGTTGA+CGG 0.447816 5.4:+51440645 MS.gene050020:CDS
CACAATAACAAGAACACTCT+TGG 0.453033 5.4:+51441206 MS.gene050020:CDS
GGAGGAGCACGGTGGTAGTA+AGG 0.453304 5.4:-51440849 None:intergenic
CGTGATTCTTCTGACATTCT+CGG 0.457636 5.4:-51440614 None:intergenic
GGAACAGAAAGAGAAGTTGC+TGG 0.466315 5.4:+51441076 MS.gene050020:CDS
AGCGGTGGAGGTGGTGGTGG+TGG 0.477596 5.4:+51441005 MS.gene050020:CDS
AAACTCACCGTTGGAGTTGA+CGG 0.483943 5.4:+51440546 MS.gene050020:CDS
GTAGCGGTGGTGGTGGATCA+AGG 0.485672 5.4:+51441027 MS.gene050020:CDS
CCACCTCCACCGCTACTGCT+AGG 0.486199 5.4:-51440996 None:intergenic
AAACGGTTAGTTCATGTAAC+CGG 0.491216 5.4:+51440772 MS.gene050020:CDS
AACGGTCTGTGATGTGCCAC+CGG 0.497928 5.4:-51440912 None:intergenic
ATGATGGTGGTGAAGGTAAC+CGG 0.500422 5.4:-51440880 None:intergenic
CAAGGAGATCGATGGTGAAA+CGG 0.502038 5.4:+51440755 MS.gene050020:CDS
AGAGGAACAAGAAGAGGAGA+TGG 0.506205 5.4:+51440455 MS.gene050020:CDS
TTCAAGTGTTCCTTCTTCAC+CGG 0.506613 5.4:-51440688 None:intergenic
CGTGCTCCTCCTTCCACAGC+CGG 0.511664 5.4:+51440861 MS.gene050020:CDS
TTCTCTGCTCATTCCACCAC+CGG 0.513977 5.4:-51440955 None:intergenic
CACCTCCACCGCTACTGCTA+GGG 0.520409 5.4:-51440995 None:intergenic
AACCCTAGCAGTAGCGGTGG+AGG 0.520715 5.4:+51440993 MS.gene050020:CDS
CTCCCTGCTGCTGCTTCCGG+TGG 0.523308 5.4:+51440939 MS.gene050020:CDS
GCAGCAGCAGGGAGAGCCAA+CGG 0.524507 5.4:-51440930 None:intergenic
GCGCCGCTTGTAACTGTCAC+CGG 0.526555 5.4:+51440721 MS.gene050020:CDS
CCTAGCAGTAGCGGTGGAGG+TGG 0.532726 5.4:+51440996 MS.gene050020:CDS
AATCACGCCGTTAGCTTCGG+TGG 0.536570 5.4:+51440630 MS.gene050020:CDS
GAGTCATAACTCGTTGGCAC+TGG 0.537593 5.4:-51440498 None:intergenic
CCACCATCATCTTGCAACTC+CGG 0.539922 5.4:+51440893 MS.gene050020:CDS
GTGGTGAAGGTAACCGGCTG+TGG 0.551358 5.4:-51440874 None:intergenic
CACCATCGATCTCCTTGCGG+TGG 0.556188 5.4:-51440749 None:intergenic
TTGCAAGATGATGGTGGTGA+AGG 0.558218 5.4:-51440887 None:intergenic
TGTTGCGAGTTTATCGCTGC+CGG 0.567002 5.4:+51440669 MS.gene050020:CDS
CCACCGGAGTTGCAAGATGA+TGG 0.569041 5.4:-51440896 None:intergenic
TGAAGGTAACCGGCTGTGGA+AGG 0.577589 5.4:-51440870 None:intergenic
TCACGTTCAAAACTCACCGT+TGG 0.581295 5.4:+51440537 MS.gene050020:CDS
AGAATTGATTGCTGTGGTGA+TGG 0.582941 5.4:-51440824 None:intergenic
AATGGAATTTGATGAACAAG+AGG 0.584250 5.4:+51440437 None:intergenic
ATCTCAAACCCTAGCAGTAG+CGG 0.586840 5.4:+51440987 MS.gene050020:CDS
TTTCCTTCCGTCAACTCCAA+CGG 0.588914 5.4:-51440553 None:intergenic
TGAACAAGAGGAACAAGAAG+AGG 0.593455 5.4:+51440449 MS.gene050020:CDS
CACCACCGGAAGCAGCAGCA+GGG 0.602778 5.4:-51440941 None:intergenic
GTTGGAGTTGACGGAAGGAA+AGG 0.610107 5.4:+51440555 MS.gene050020:CDS
CCAACGAGTTATGACTCACT+TGG 0.611073 5.4:+51440504 MS.gene050020:CDS
CGCAACAACCGTCAACAGCA+TGG 0.612162 5.4:-51440653 None:intergenic
AGGTAACCGGCTGTGGAAGG+AGG 0.612370 5.4:-51440867 None:intergenic
GGTGGCACATCACAGACCGT+TGG 0.612785 5.4:+51440914 MS.gene050020:CDS
ATTCAGAACAAAATTCACTC+AGG 0.624697 5.4:+51441055 MS.gene050020:CDS
TTGCTGTGGTGATGGTATTG+CGG 0.630881 5.4:-51440816 None:intergenic
TCACCGGAACTTCCACCGCA+AGG 0.633282 5.4:+51440737 MS.gene050020:CDS
TCAAACCCTAGCAGTAGCGG+TGG 0.634884 5.4:+51440990 MS.gene050020:CDS
TCACCGTTGGAGTTGACGGA+AGG 0.640977 5.4:+51440550 MS.gene050020:CDS
CCATCATCTTGCAACTCCGG+TGG 0.641524 5.4:+51440896 MS.gene050020:CDS
TTCCACCGCAAGGAGATCGA+TGG 0.642395 5.4:+51440747 MS.gene050020:CDS
CCAAGTGAGTCATAACTCGT+TGG 0.644449 5.4:-51440504 None:intergenic
GGAAGGAAAGGTAACGGCAA+CGG 0.650969 5.4:+51440567 MS.gene050020:CDS
GTTGACGGAAGGAAAGGTAA+CGG 0.669388 5.4:+51440561 MS.gene050020:CDS
TTTCACCATCGATCTCCTTG+CGG 0.669478 5.4:-51440752 None:intergenic
CGGCTGTGGAAGGAGGAGCA+CGG 0.673027 5.4:-51440860 None:intergenic
AGCATGGCCACCGAAGCTAA+CGG 0.680090 5.4:-51440637 None:intergenic
CTGTGGTGATGGTATTGCGG+CGG 0.691893 5.4:-51440813 None:intergenic
CCGGAGTTGCAAGATGATGG+TGG 0.694873 5.4:-51440893 None:intergenic
AAGGCGAGAATTGATTGCTG+TGG 0.722344 5.4:-51440830 None:intergenic
GTTCCGGTGACAGTTACAAG+CGG 0.723013 5.4:-51440724 None:intergenic
CTGTGGAAGGAGGAGCACGG+TGG 0.754237 5.4:-51440857 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
! AGAGAAATGTTCTTAAAGTT+TGG + chr5.4:51441180-51441199 MS.gene050020:CDS 25.0%
ATTCAGAACAAAATTCACTC+AGG + chr5.4:51441055-51441074 MS.gene050020:CDS 30.0%
CACAATAACAAGAACACTCT+TGG + chr5.4:51441206-51441225 MS.gene050020:CDS 35.0%
! AAACGGTTAGTTCATGTAAC+CGG + chr5.4:51440772-51440791 MS.gene050020:CDS 35.0%
AGAATTGATTGCTGTGGTGA+TGG - chr5.4:51440827-51440846 None:intergenic 40.0%
CGTGATTCTTCTGACATTCT+CGG - chr5.4:51440617-51440636 None:intergenic 40.0%
TGAACAAGAGGAACAAGAAG+AGG + chr5.4:51440449-51440468 MS.gene050020:CDS 40.0%
TTCAAGTGTTCCTTCTTCAC+CGG - chr5.4:51440691-51440710 None:intergenic 40.0%
! CTTTTGCTGAAGAACATGGT+TGG + chr5.4:51441099-51441118 MS.gene050020:CDS 40.0%
AAACTCACCGTTGGAGTTGA+CGG + chr5.4:51440546-51440565 MS.gene050020:CDS 45.0%
AAGGCGAGAATTGATTGCTG+TGG - chr5.4:51440833-51440852 None:intergenic 45.0%
AGAGGAACAAGAAGAGGAGA+TGG + chr5.4:51440455-51440474 MS.gene050020:CDS 45.0%
ATCTCAAACCCTAGCAGTAG+CGG + chr5.4:51440987-51441006 MS.gene050020:CDS 45.0%
CAAGGAGATCGATGGTGAAA+CGG + chr5.4:51440755-51440774 MS.gene050020:CDS 45.0%
CCAACGAGTTATGACTCACT+TGG + chr5.4:51440504-51440523 MS.gene050020:CDS 45.0%
CCAAGTGAGTCATAACTCGT+TGG - chr5.4:51440507-51440526 None:intergenic 45.0%
GGAACAGAAAGAGAAGTTGC+TGG + chr5.4:51441076-51441095 MS.gene050020:CDS 45.0%
GTTGACGGAAGGAAAGGTAA+CGG + chr5.4:51440561-51440580 MS.gene050020:CDS 45.0%
TCACGTTCAAAACTCACCGT+TGG + chr5.4:51440537-51440556 MS.gene050020:CDS 45.0%
TTTCACCATCGATCTCCTTG+CGG - chr5.4:51440755-51440774 None:intergenic 45.0%
TTTCCTTCCGTCAACTCCAA+CGG - chr5.4:51440556-51440575 None:intergenic 45.0%
! AAGAATCACGCCGTTAGCTT+CGG + chr5.4:51440627-51440646 MS.gene050020:CDS 45.0%
!! ATGATGGTGGTGAAGGTAAC+CGG - chr5.4:51440883-51440902 None:intergenic 45.0%
!! CTGGCTTTTGCTGAAGAACA+TGG + chr5.4:51441095-51441114 MS.gene050020:CDS 45.0%
!! TTGCAAGATGATGGTGGTGA+AGG - chr5.4:51440890-51440909 None:intergenic 45.0%
!! TTGCTGTGGTGATGGTATTG+CGG - chr5.4:51440819-51440838 None:intergenic 45.0%
CCACCATCATCTTGCAACTC+CGG + chr5.4:51440893-51440912 MS.gene050020:CDS 50.0%
GAGTCATAACTCGTTGGCAC+TGG - chr5.4:51440501-51440520 None:intergenic 50.0%
GTTCCGGTGACAGTTACAAG+CGG - chr5.4:51440727-51440746 None:intergenic 50.0%
GTTGGAGTTGACGGAAGGAA+AGG + chr5.4:51440555-51440574 MS.gene050020:CDS 50.0%
TGTTGCGAGTTTATCGCTGC+CGG + chr5.4:51440669-51440688 MS.gene050020:CDS 50.0%
TTCTCTGCTCATTCCACCAC+CGG - chr5.4:51440958-51440977 None:intergenic 50.0%
TTTATCGCTGCCGGTGAAGA+AGG + chr5.4:51440678-51440697 MS.gene050020:CDS 50.0%
! GGAAGGAAAGGTAACGGCAA+CGG + chr5.4:51440567-51440586 MS.gene050020:CDS 50.0%
!! CAACGGCTGTTTTGCTTCGA+CGG + chr5.4:51440584-51440603 MS.gene050020:CDS 50.0%
!! GGCACTGGTGTTTGTGTTTC+TGG - chr5.4:51440486-51440505 None:intergenic 50.0%
AACGGTCTGTGATGTGCCAC+CGG - chr5.4:51440915-51440934 None:intergenic 55.0%
AGCATGGCCACCGAAGCTAA+CGG - chr5.4:51440640-51440659 None:intergenic 55.0%
CCACCGGAGTTGCAAGATGA+TGG - chr5.4:51440899-51440918 None:intergenic 55.0%
CCATCATCTTGCAACTCCGG+TGG + chr5.4:51440896-51440915 MS.gene050020:CDS 55.0%
CGCAACAACCGTCAACAGCA+TGG - chr5.4:51440656-51440675 None:intergenic 55.0%
TCAAACCCTAGCAGTAGCGG+TGG + chr5.4:51440990-51441009 MS.gene050020:CDS 55.0%
TCACCGTTGGAGTTGACGGA+AGG + chr5.4:51440550-51440569 MS.gene050020:CDS 55.0%
TCTCCTTGCGGTGGAAGTTC+CGG - chr5.4:51440743-51440762 None:intergenic 55.0%
TGAAGGTAACCGGCTGTGGA+AGG - chr5.4:51440873-51440892 None:intergenic 55.0%
TTCCACCGCAAGGAGATCGA+TGG + chr5.4:51440747-51440766 MS.gene050020:CDS 55.0%
TTCGGTGGCCATGCTGTTGA+CGG + chr5.4:51440645-51440664 MS.gene050020:CDS 55.0%
! AATCACGCCGTTAGCTTCGG+TGG + chr5.4:51440630-51440649 MS.gene050020:CDS 55.0%
! CCGGAGTTGCAAGATGATGG+TGG - chr5.4:51440896-51440915 None:intergenic 55.0%
!! CTGTGGTGATGGTATTGCGG+CGG - chr5.4:51440816-51440835 None:intergenic 55.0%
!! GCTGTTTTGCTTCGACGGTG+AGG + chr5.4:51440589-51440608 MS.gene050020:CDS 55.0%
AACCCTAGCAGTAGCGGTGG+AGG + chr5.4:51440993-51441012 MS.gene050020:CDS 60.0%
AGGTAACCGGCTGTGGAAGG+AGG - chr5.4:51440870-51440889 None:intergenic 60.0%
CACCATCGATCTCCTTGCGG+TGG - chr5.4:51440752-51440771 None:intergenic 60.0%
CACCTCCACCGCTACTGCTA+GGG - chr5.4:51440998-51441017 None:intergenic 60.0%
GCGCCGCTTGTAACTGTCAC+CGG + chr5.4:51440721-51440740 MS.gene050020:CDS 60.0%
GGTGGCACATCACAGACCGT+TGG + chr5.4:51440914-51440933 MS.gene050020:CDS 60.0%
GTGGTGAAGGTAACCGGCTG+TGG - chr5.4:51440877-51440896 None:intergenic 60.0%
TCACCGGAACTTCCACCGCA+AGG + chr5.4:51440737-51440756 MS.gene050020:CDS 60.0%
TGATGGTATTGCGGCGGTGG+AGG - chr5.4:51440810-51440829 None:intergenic 60.0%
! GGAGGAGCACGGTGGTAGTA+AGG - chr5.4:51440852-51440871 None:intergenic 60.0%
!! GTAGCGGTGGTGGTGGATCA+AGG + chr5.4:51441027-51441046 MS.gene050020:CDS 60.0%
!! TGGTGATGGTATTGCGGCGG+TGG - chr5.4:51440813-51440832 None:intergenic 60.0%
AGCAGTAGCGGTGGAGGTGG+TGG + chr5.4:51440999-51441018 MS.gene050020:CDS 65.0%
CACCACCGGAAGCAGCAGCA+GGG - chr5.4:51440944-51440963 None:intergenic 65.0%
CCACCTCCACCGCTACTGCT+AGG - chr5.4:51440999-51441018 None:intergenic 65.0%
CCTAGCAGTAGCGGTGGAGG+TGG + chr5.4:51440996-51441015 MS.gene050020:CDS 65.0%
CGGCTGTGGAAGGAGGAGCA+CGG - chr5.4:51440863-51440882 None:intergenic 65.0%
CGTGCTCCTCCTTCCACAGC+CGG + chr5.4:51440861-51440880 MS.gene050020:CDS 65.0%
GCAGCAGCAGGGAGAGCCAA+CGG - chr5.4:51440933-51440952 None:intergenic 65.0%
TATTGCGGCGGTGGAGGTGG+TGG - chr5.4:51440804-51440823 None:intergenic 65.0%
TGGTATTGCGGCGGTGGAGG+TGG - chr5.4:51440807-51440826 None:intergenic 65.0%
! AGTAGCGGTGGAGGTGGTGG+TGG + chr5.4:51441002-51441021 MS.gene050020:CDS 65.0%
! CTGTGGAAGGAGGAGCACGG+TGG - chr5.4:51440860-51440879 None:intergenic 65.0%
! GCTCTCCCTGCTGCTGCTTC+CGG + chr5.4:51440936-51440955 MS.gene050020:CDS 65.0%
! GTGGAGGTGGTGGCTGTGAC+CGG - chr5.4:51440794-51440813 None:intergenic 65.0%
!! GGAGGTGGTGGTGGTGGTAG+CGG + chr5.4:51441011-51441030 MS.gene050020:CDS 65.0%
CCACCACCGGAAGCAGCAGC+AGG - chr5.4:51440945-51440964 None:intergenic 70.0%
! CCTGCTGCTGCTTCCGGTGG+TGG + chr5.4:51440942-51440961 MS.gene050020:CDS 70.0%
! CTCCCTGCTGCTGCTTCCGG+TGG + chr5.4:51440939-51440958 MS.gene050020:CDS 70.0%
!! AGCGGTGGAGGTGGTGGTGG+TGG + chr5.4:51441005-51441024 MS.gene050020:CDS 70.0%
!! GGTGGTGGTAGCGGTGGTGG+TGG + chr5.4:51441020-51441039 MS.gene050020:CDS 70.0%
!! GGTGGTGGTGGTAGCGGTGG+TGG + chr5.4:51441017-51441036 MS.gene050020:CDS 70.0%
!! GGTGGTGGTGGTGGTAGCGG+TGG + chr5.4:51441014-51441033 MS.gene050020:CDS 70.0%


Chromosome Type Strat End Strand Name
chr5.4 gene 51440438 51441241 51440438 ID=MS.gene050020
chr5.4 mRNA 51440438 51441241 51440438 ID=MS.gene050020.t1;Parent=MS.gene050020
chr5.4 exon 51440438 51441241 51440438 ID=MS.gene050020.t1.exon1;Parent=MS.gene050020.t1
chr5.4 CDS 51440438 51441241 51440438 ID=cds.MS.gene050020.t1;Parent=MS.gene050020.t1
Gene Sequence

>MS.gene050020

ATGGAATTTGATGAACAAGAGGAACAAGAAGAGGAGATGGAGATTCCAGAAACACAAACACCAGTGCCAACGAGTTATGACTCACTTGGTAACTCAGCTTCACGTTCAAAACTCACCGTTGGAGTTGACGGAAGGAAAGGTAACGGCAACGGCTGTTTTGCTTCGACGGTGAGGTACCGAGAATGTCAGAAGAATCACGCCGTTAGCTTCGGTGGCCATGCTGTTGACGGTTGTTGCGAGTTTATCGCTGCCGGTGAAGAAGGAACACTTGAAGCTGTTATTTGCGCCGCTTGTAACTGTCACCGGAACTTCCACCGCAAGGAGATCGATGGTGAAACGGTTAGTTCATGTAACCGGTCACAGCCACCACCTCCACCGCCGCAATACCATCACCACAGCAATCAATTCTCGCCTTACTACCACCGTGCTCCTCCTTCCACAGCCGGTTACCTTCACCACCATCATCTTGCAACTCCGGTGGCACATCACAGACCGTTGGCTCTCCCTGCTGCTGCTTCCGGTGGTGGAATGAGCAGAGAAGATGATGATATCTCAAACCCTAGCAGTAGCGGTGGAGGTGGTGGTGGTGGTAGCGGTGGTGGTGGATCAAGGAAGAGATTCAGAACAAAATTCACTCAGGAACAGAAAGAGAAGTTGCTGGCTTTTGCTGAAGAACATGGTTGGAGAATTCAGAAACAAGATGAAGCTGCTATAGAACAGTTTTGTGCTGAGAATTGTATCAAGAGAAATGTTCTTAAAGTTTGGATGCACAATAACAAGAACACTCTTGGTAAGAAACCCTAA

Protein sequence

>MS.gene050020.t1

MEFDEQEEQEEEMEIPETQTPVPTSYDSLGNSASRSKLTVGVDGRKGNGNGCFASTVRYRECQKNHAVSFGGHAVDGCCEFIAAGEEGTLEAVICAACNCHRNFHRKEIDGETVSSCNRSQPPPPPPQYHHHSNQFSPYYHRAPPSTAGYLHHHHLATPVAHHRPLALPAAASGGGMSREDDDISNPSSSGGGGGGGSGGGGSRKRFRTKFTQEQKEKLLAFAEEHGWRIQKQDEAAIEQFCAENCIKRNVLKVWMHNNKNTLGKKP