AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene068234

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene068234.t1 MTR_8g043650 93.778 225 14 0 1 225 1 225 4.51e-157 435
MS.gene068234.t1 MTR_1g105910 91.556 225 19 0 1 225 1 225 1.14e-153 427
MS.gene068234.t1 MTR_1g105920 89.954 219 22 0 1 219 1 219 2.48e-148 413
MS.gene068234.t1 MTR_1g012570 89.041 219 24 0 1 219 1 219 4.77e-144 402
MS.gene068234.t1 MTR_2g030740 87.215 219 28 0 1 219 1 219 3.29e-143 400
MS.gene068234.t1 MTR_3g052920 85.388 219 32 0 1 219 1 219 3.55e-140 392
MS.gene068234.t1 MTR_1g105905 84.135 208 33 0 18 225 1 208 9.20e-129 363
MS.gene068234.t1 MTR_3g052870 78.995 219 27 1 1 219 1 200 1.20e-121 345
MS.gene068234.t1 MTR_3g030770 72.340 235 47 3 1 225 1 227 1.11e-116 333
MS.gene068234.t1 MTR_1g106070 86.264 182 25 0 1 182 1 182 4.91e-116 329
MS.gene068234.t1 MTR_1g108510 72.340 235 47 3 1 225 1 227 5.95e-116 331
MS.gene068234.t1 MTR_0121s0080 71.806 227 64 0 1 227 1 227 4.34e-115 329
MS.gene068234.t1 MTR_5g055100 65.823 237 81 0 1 237 1 237 6.71e-114 326
MS.gene068234.t1 MTR_1g077360 68.889 225 70 0 1 225 1 225 3.43e-113 324
MS.gene068234.t1 MTR_2g093190 71.064 235 50 3 1 225 1 227 5.21e-112 321
MS.gene068234.t1 MTR_1g075600 68.889 225 70 0 1 225 1 225 6.10e-112 321
MS.gene068234.t1 MTR_1g108580 70.213 235 52 3 1 225 1 227 1.76e-111 320
MS.gene068234.t1 MTR_5g045560 68.889 225 70 0 1 225 1 225 2.30e-111 320
MS.gene068234.t1 MTR_2g085280 66.372 226 76 0 1 226 1 226 2.16e-109 315
MS.gene068234.t1 MTR_2g085250 66.372 226 76 0 1 226 1 226 5.65e-109 313
MS.gene068234.t1 MTR_5g053390 66.667 225 75 0 1 225 1 225 1.73e-106 307
MS.gene068234.t1 MTR_7g062350 66.038 212 71 1 16 226 27 238 2.85e-95 279
MS.gene068234.t1 MTR_1g075570 61.798 178 54 1 18 195 1 164 3.57e-67 205
MS.gene068234.t1 MTR_0121s0100 75.000 132 33 0 1 132 1 132 1.19e-65 200
MS.gene068234.t1 MTR_3g030780 71.212 132 38 0 1 132 1 132 6.45e-61 188
MS.gene068234.t1 MTR_3g080940 48.691 191 94 1 7 193 7 197 2.90e-60 189
MS.gene068234.t1 MTR_3g067910 66.667 102 34 0 21 122 2 103 4.87e-44 144
MS.gene068234.t1 MTR_2g105290 39.181 171 94 2 5 172 8 171 5.19e-39 133
MS.gene068234.t1 MTR_8g086290 40.964 166 88 2 5 167 8 166 7.96e-39 133
MS.gene068234.t1 MTR_7g028448 43.871 155 75 3 5 159 8 150 1.49e-32 117
MS.gene068234.t1 MTR_4g036915 43.871 155 75 3 5 159 8 150 1.49e-32 117
MS.gene068234.t1 MTR_1g108500 57.522 113 25 2 8 118 94 185 8.95e-30 114
MS.gene068234.t1 MTR_4g127140 38.122 181 92 4 5 172 8 181 9.26e-30 110
MS.gene068234.t1 MTR_3g067875 83.929 56 9 0 18 73 1 56 3.81e-27 99.8
MS.gene068234.t1 MTR_3g067870 69.841 63 19 0 16 78 83 145 7.96e-23 91.3
MS.gene068234.t1 MTR_1g047550 59.420 69 28 0 9 77 2 70 3.61e-22 90.1
MS.gene068234.t1 MTR_8g079502 59.420 69 28 0 9 77 2 70 6.33e-22 89.7
MS.gene068234.t1 MTR_3g067915 47.872 94 49 0 33 126 3 96 1.48e-21 86.3
MS.gene068234.t1 MTR_4g131030 38.793 116 56 2 9 109 2 117 1.69e-21 89.4
MS.gene068234.t1 MTR_1g054265 42.735 117 63 2 9 125 2 114 2.21e-21 87.8
MS.gene068234.t1 MTR_8g051580 44.554 101 54 1 9 109 2 100 3.54e-21 87.8
MS.gene068234.t1 MTR_1g063160 42.342 111 61 2 9 118 2 110 9.65e-21 86.3
MS.gene068234.t1 MTR_8g046350 44.330 97 49 1 9 105 2 93 1.42e-19 82.8
MS.gene068234.t1 MTR_4g094632 40.566 106 61 1 9 114 2 105 4.51e-19 81.3
MS.gene068234.t1 MTR_4g094638 41.509 106 61 1 9 113 2 107 5.96e-18 79.0
MS.gene068234.t1 MTR_1g053070 33.333 165 95 3 9 172 2 152 1.24e-17 79.7
MS.gene068234.t1 MTR_3g452380 42.453 106 51 1 3 108 11 106 1.32e-17 79.3
MS.gene068234.t1 MTR_4g093970 57.576 66 28 0 10 75 29 94 1.50e-17 79.3
MS.gene068234.t1 MTR_4g102530 50.685 73 36 0 10 82 3 75 2.04e-17 78.2
MS.gene068234.t1 MTR_3g005530 50.000 68 34 0 9 76 2 69 5.19e-17 77.4
MS.gene068234.t1 MTR_8g033270 51.471 68 33 0 9 76 2 69 1.36e-16 77.0
MS.gene068234.t1 MTR_8g087860 51.471 68 33 0 9 76 18 85 3.21e-16 75.9
MS.gene068234.t1 MTR_3g102570 42.308 104 57 3 9 111 2 103 3.67e-16 76.6
MS.gene068234.t1 MTR_6g464720 49.275 69 34 1 9 76 2 70 4.69e-16 75.5
MS.gene068234.t1 MTR_5g066180 50.000 68 34 0 9 76 2 69 4.81e-16 74.7
MS.gene068234.t1 MTR_1g101970 50.000 68 34 0 9 76 2 69 5.44e-16 73.9
MS.gene068234.t1 MTR_5g032150 29.384 211 130 6 9 201 2 211 7.42e-16 74.3
MS.gene068234.t1 MTR_2g017865 40.385 104 61 1 9 112 17 119 7.95e-16 74.7
MS.gene068234.t1 MTR_5g032520 28.169 213 129 6 9 201 2 210 8.50e-16 74.3
MS.gene068234.t1 MTR_4g109830 47.826 69 35 1 9 76 2 70 9.98e-16 74.3
MS.gene068234.t1 MTR_2g009890 48.529 68 35 0 9 76 2 69 2.18e-15 73.9
MS.gene068234.t1 MTR_7g075870 50.746 67 33 0 10 76 3 69 2.59e-15 72.8
MS.gene068234.t1 MTR_8g033220 47.436 78 41 0 10 87 3 80 3.06e-15 72.8
MS.gene068234.t1 MTR_8g033220 47.436 78 41 0 10 87 3 80 3.46e-15 72.8
MS.gene068234.t1 MTR_3g437790 34.266 143 77 4 26 159 30 164 4.16e-15 71.6
MS.gene068234.t1 MTR_0003s0590 50.000 68 34 0 9 76 2 69 8.88e-15 72.0
MS.gene068234.t1 MTR_8g066260 40.964 83 46 1 9 91 2 81 1.00e-14 71.6
MS.gene068234.t1 MTR_5g031000 48.529 68 35 0 9 76 2 69 1.21e-14 71.2
MS.gene068234.t1 MTR_5g031000 48.529 68 35 0 9 76 2 69 1.27e-14 70.9
MS.gene068234.t1 MTR_4g084740 46.053 76 39 2 9 83 2 76 1.30e-14 72.4
MS.gene068234.t1 MTR_5g046790 43.590 78 39 2 9 86 2 74 1.70e-14 70.5
MS.gene068234.t1 MTR_5g046870 47.826 69 35 1 9 76 2 70 2.76e-14 67.4
MS.gene068234.t1 MTR_2g461710 53.571 56 26 0 9 64 2 57 5.29e-14 65.1
MS.gene068234.t1 MTR_7g075870 50.000 68 33 1 10 76 3 70 6.87e-14 68.9
MS.gene068234.t1 MTR_8g022970 31.818 154 92 3 8 155 17 163 7.24e-14 68.2
MS.gene068234.t1 MTR_1g038300 47.143 70 35 1 9 76 2 71 1.07e-13 68.6
MS.gene068234.t1 MTR_6g015975 46.377 69 36 1 9 76 2 70 1.25e-13 68.6
MS.gene068234.t1 MTR_7g016600 46.377 69 36 1 9 76 2 70 1.39e-13 68.6
MS.gene068234.t1 MTR_7g016630 43.478 69 38 1 9 76 2 70 1.74e-13 68.2
MS.gene068234.t1 MTR_5g021270 47.143 70 35 1 9 76 2 71 2.56e-13 67.4
MS.gene068234.t1 MTR_5g021270 47.143 70 35 1 9 76 2 71 2.57e-13 67.4
MS.gene068234.t1 MTR_7g075850 45.714 70 36 1 9 76 2 71 4.32e-13 67.0
MS.gene068234.t1 MTR_3g084980 47.826 69 35 1 9 76 2 70 4.40e-13 67.0
MS.gene068234.t1 MTR_4g109810 31.224 237 128 12 9 226 2 222 5.19e-13 66.6
MS.gene068234.t1 MTR_8g097090 46.377 69 36 1 9 76 2 70 5.67e-13 66.6
MS.gene068234.t1 MTR_1g029670 42.857 70 38 1 9 76 2 71 7.04e-13 65.5
MS.gene068234.t1 MTR_4g051538 32.500 160 96 3 5 164 5 152 1.09e-12 65.9
MS.gene068234.t1 MTR_5g066960 47.368 57 30 0 9 65 2 58 1.34e-12 61.2
MS.gene068234.t1 MTR_3g088615 41.429 70 39 1 9 76 2 71 3.10e-12 63.5
MS.gene068234.t1 MTR_3g113030 46.032 63 34 0 9 71 2 64 4.58e-12 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene068234.t1 AT5G60440 54.497 189 77 4 5 189 3 186 1.93e-59 190
MS.gene068234.t1 AT2G24840 47.561 164 75 4 6 163 60 218 3.12e-41 142
MS.gene068234.t1 AT4G36590 46.914 162 80 2 5 160 3 164 2.20e-40 139
MS.gene068234.t1 AT1G65360 38.326 227 125 6 5 225 3 220 1.46e-38 134
MS.gene068234.t1 AT1G01530 40.609 197 95 5 4 192 2 184 5.29e-38 133
MS.gene068234.t1 AT2G34440 45.299 117 55 2 9 121 2 113 4.09e-26 100
MS.gene068234.t1 AT3G66656 41.732 127 70 1 9 131 2 128 1.61e-25 99.0
MS.gene068234.t1 AT3G04100 30.263 152 102 2 2 149 7 158 6.22e-22 90.5
MS.gene068234.t1 AT1G72350 35.374 147 62 4 9 155 43 156 2.05e-20 86.7
MS.gene068234.t1 AT1G28460 30.636 173 110 4 5 174 4 169 1.69e-18 80.5
MS.gene068234.t1 AT4G22950 50.000 76 38 0 10 85 3 78 2.67e-18 79.7
MS.gene068234.t1 AT4G09960 46.512 86 45 1 9 93 2 87 3.36e-18 80.5
MS.gene068234.t1 AT4G09960 46.512 86 45 1 9 93 2 87 3.94e-18 80.9
MS.gene068234.t1 AT4G09960 46.512 86 45 1 9 93 3 88 4.45e-18 80.5
MS.gene068234.t1 AT2G45650 52.941 68 32 0 9 76 2 69 5.39e-18 80.9
MS.gene068234.t1 AT4G09960 46.512 86 45 1 9 93 12 97 5.79e-18 80.5
MS.gene068234.t1 AT4G09960 46.512 86 45 1 9 93 28 113 8.43e-18 80.5
MS.gene068234.t1 AT4G22950 50.000 76 38 0 10 85 3 78 8.96e-18 79.3
MS.gene068234.t1 AT4G22950 50.000 76 38 0 10 85 3 78 8.96e-18 79.3
MS.gene068234.t1 AT4G09960 46.512 86 45 1 9 93 97 182 2.08e-17 80.1
MS.gene068234.t1 AT4G18960 42.308 104 49 2 5 108 15 107 6.05e-17 77.8
MS.gene068234.t1 AT1G29962 29.070 172 115 4 5 169 4 175 7.43e-17 76.3
MS.gene068234.t1 AT2G45660 50.000 68 34 0 10 77 3 70 2.12e-16 74.3
MS.gene068234.t1 AT3G61120 51.471 68 33 0 9 76 2 69 2.33e-16 76.3
MS.gene068234.t1 AT2G22540 51.471 68 33 0 9 76 2 69 3.10e-16 75.9
MS.gene068234.t1 AT2G22540 51.471 68 33 0 9 76 2 69 3.10e-16 75.9
MS.gene068234.t1 AT2G42830 50.704 71 35 0 6 76 14 84 3.46e-16 75.9
MS.gene068234.t1 AT3G57230 47.059 68 36 0 9 76 2 69 3.54e-16 73.6
MS.gene068234.t1 AT2G42830 50.704 71 35 0 6 76 14 84 3.60e-16 75.9
MS.gene068234.t1 AT3G58780 50.704 71 35 0 6 76 14 84 3.71e-16 75.5
MS.gene068234.t1 AT3G58780 50.704 71 35 0 6 76 20 90 4.00e-16 75.9
MS.gene068234.t1 AT2G45660 50.000 68 34 0 10 77 3 70 6.23e-16 74.3
MS.gene068234.t1 AT3G58780 50.704 71 35 0 6 76 14 84 6.60e-16 75.5
MS.gene068234.t1 AT5G62165 49.254 67 34 0 10 76 3 69 8.64e-16 71.2
MS.gene068234.t1 AT1G22130 36.190 105 66 1 9 112 2 106 1.12e-15 75.5
MS.gene068234.t1 AT3G57230 47.059 68 36 0 9 76 2 69 1.15e-15 74.3
MS.gene068234.t1 AT3G57230 47.059 68 36 0 9 76 2 69 1.15e-15 74.3
MS.gene068234.t1 AT5G62165 49.254 67 34 0 10 76 3 69 1.52e-15 72.0
MS.gene068234.t1 AT5G62165 49.254 67 34 0 10 76 3 69 1.52e-15 72.0
MS.gene068234.t1 AT5G62165 49.254 67 34 0 10 76 3 69 1.52e-15 72.0
MS.gene068234.t1 AT5G62165 49.254 67 34 0 10 76 3 69 1.52e-15 72.0
MS.gene068234.t1 AT5G62165 49.254 67 34 0 10 76 3 69 1.52e-15 72.0
MS.gene068234.t1 AT1G77950 46.053 76 39 2 9 83 2 76 1.61e-15 73.9
MS.gene068234.t1 AT1G77950 46.053 76 39 2 9 83 2 76 1.61e-15 73.9
MS.gene068234.t1 AT1G77950 46.053 76 39 2 9 83 2 76 1.61e-15 73.9
MS.gene068234.t1 AT1G77950 46.053 76 39 2 9 83 2 76 1.61e-15 73.9
MS.gene068234.t1 AT5G62165 49.254 67 34 0 10 76 3 69 1.75e-15 72.0
MS.gene068234.t1 AT5G62165 49.254 67 34 0 10 76 3 69 1.75e-15 72.0
MS.gene068234.t1 AT5G62165 49.254 67 34 0 10 76 3 69 1.75e-15 72.0
MS.gene068234.t1 AT1G77980 37.143 105 65 1 9 112 2 106 2.01e-15 74.7
MS.gene068234.t1 AT3G57390 48.529 68 35 0 9 76 2 69 2.31e-15 73.2
MS.gene068234.t1 AT4G24540 50.000 68 34 0 9 76 2 69 2.48e-15 72.8
MS.gene068234.t1 AT1G69120 43.373 83 44 1 9 91 2 81 3.05e-15 72.8
MS.gene068234.t1 AT5G13790 41.935 93 45 1 9 101 2 85 3.72e-15 73.2
MS.gene068234.t1 AT4G11880 48.611 72 36 1 10 80 3 74 4.08e-15 71.6
MS.gene068234.t1 AT4G11880 48.611 72 36 1 10 80 3 74 4.08e-15 71.6
MS.gene068234.t1 AT3G57390 48.529 68 35 0 9 76 2 69 4.57e-15 72.8
MS.gene068234.t1 AT5G51870 50.746 67 33 0 10 76 3 69 4.63e-15 71.2
MS.gene068234.t1 AT5G13790 50.000 68 34 0 9 76 2 69 4.70e-15 72.8
MS.gene068234.t1 AT5G62165 49.254 67 34 0 10 76 3 69 5.14e-15 71.6
MS.gene068234.t1 AT5G62165 49.254 67 34 0 10 76 3 69 5.14e-15 71.6
MS.gene068234.t1 AT5G60910 49.296 71 33 1 9 79 2 69 5.18e-15 72.4
MS.gene068234.t1 AT5G62165 49.254 67 34 0 10 76 3 69 5.75e-15 71.6
MS.gene068234.t1 AT5G62165 49.254 67 34 0 10 76 3 69 5.75e-15 71.6
MS.gene068234.t1 AT5G62165 49.254 67 34 0 10 76 3 69 5.75e-15 71.6
MS.gene068234.t1 AT1G69120 43.373 83 44 1 9 91 2 81 5.87e-15 72.4
MS.gene068234.t1 AT2G22630 47.059 68 36 0 9 76 2 69 5.98e-15 72.0
MS.gene068234.t1 AT2G22630 47.059 68 36 0 9 76 2 69 5.98e-15 72.0
MS.gene068234.t1 AT1G17310 50.633 79 37 1 8 86 47 123 6.38e-15 71.6
MS.gene068234.t1 AT4G11880 48.611 72 36 1 10 80 3 74 6.67e-15 71.6
MS.gene068234.t1 AT4G11880 48.611 72 36 1 10 80 3 74 6.67e-15 71.6
MS.gene068234.t1 AT5G51870 50.746 67 33 0 10 76 3 69 6.69e-15 71.6
MS.gene068234.t1 AT1G26310 47.826 69 35 1 9 76 2 70 6.87e-15 72.4
MS.gene068234.t1 AT1G17310 50.633 79 37 1 8 86 58 134 7.50e-15 71.6
MS.gene068234.t1 AT5G51870 47.222 72 38 0 5 76 21 92 8.31e-15 70.9
MS.gene068234.t1 AT5G51860 50.746 67 33 0 10 76 3 69 1.00e-14 71.2
MS.gene068234.t1 AT5G51860 50.746 67 33 0 10 76 3 69 1.02e-14 70.9
MS.gene068234.t1 AT5G51870 50.746 67 33 0 10 76 3 69 1.17e-14 70.9
MS.gene068234.t1 AT5G51870 50.746 67 33 0 10 76 13 79 1.37e-14 70.9
MS.gene068234.t1 AT3G30260 29.878 164 99 4 9 172 2 149 1.43e-14 71.2
MS.gene068234.t1 AT4G37940 45.588 68 37 0 9 76 2 69 1.48e-14 70.5
MS.gene068234.t1 AT4G37940 45.588 68 37 0 9 76 2 69 1.68e-14 70.9
MS.gene068234.t1 AT1G28450 29.371 143 95 3 5 141 4 146 1.80e-14 69.7
MS.gene068234.t1 AT5G10140 47.826 69 35 1 9 76 2 70 2.18e-14 69.3
MS.gene068234.t1 AT4G37940 45.588 68 37 0 9 76 2 69 2.20e-14 69.3
MS.gene068234.t1 AT5G10140 47.826 69 35 1 9 76 2 70 2.57e-14 69.3
MS.gene068234.t1 AT5G10140 47.826 69 35 1 9 76 2 70 3.18e-14 69.3
MS.gene068234.t1 AT5G10140 47.826 69 35 1 9 76 2 70 3.32e-14 69.3
MS.gene068234.t1 AT2G14210 46.377 69 36 1 9 76 2 70 5.64e-14 69.3
MS.gene068234.t1 AT2G14210 46.377 69 36 1 9 76 2 70 6.01e-14 69.3
MS.gene068234.t1 AT3G02310 47.826 69 35 1 9 76 2 70 1.11e-13 68.2
MS.gene068234.t1 AT2G22540 50.000 68 29 1 9 76 2 64 1.12e-13 68.6
MS.gene068234.t1 AT3G54340 47.619 63 33 0 9 71 2 64 1.43e-13 68.2
MS.gene068234.t1 AT5G20240 48.387 62 32 0 9 70 2 63 1.62e-13 66.2
MS.gene068234.t1 AT5G15800 46.377 69 36 1 9 76 2 70 2.50e-13 67.8
MS.gene068234.t1 AT5G23260 43.617 94 45 3 5 90 12 105 2.87e-13 67.8
MS.gene068234.t1 AT5G23260 43.617 94 45 3 5 90 12 105 2.92e-13 67.8
MS.gene068234.t1 AT3G02310 47.826 69 35 1 9 76 2 70 2.93e-13 67.8
MS.gene068234.t1 AT5G15800 46.377 69 36 1 9 76 2 70 3.18e-13 67.8
MS.gene068234.t1 AT3G58780 51.667 60 29 0 6 65 14 73 3.33e-13 67.4
MS.gene068234.t1 AT5G20240 48.387 62 32 0 9 70 2 63 4.29e-13 66.6
MS.gene068234.t1 AT5G23260 43.182 88 44 2 9 90 2 89 4.46e-13 67.0
MS.gene068234.t1 AT3G58780 51.667 60 29 0 6 65 14 73 4.50e-13 67.4
MS.gene068234.t1 AT5G23260 43.182 88 44 2 9 90 2 89 4.96e-13 67.0
MS.gene068234.t1 AT1G24260 40.206 97 55 1 9 105 2 95 5.81e-13 66.6
MS.gene068234.t1 AT1G24260 46.377 69 36 1 9 76 2 70 6.87e-13 66.6
MS.gene068234.t1 AT1G24260 46.377 69 36 1 9 76 2 70 6.93e-13 66.6
MS.gene068234.t1 AT2G03710 51.786 56 27 0 9 64 2 57 7.31e-13 65.5
MS.gene068234.t1 AT2G03710 51.786 56 27 0 9 64 2 57 2.27e-12 65.1
MS.gene068234.t1 AT2G03710 51.786 56 27 0 9 64 2 57 2.32e-12 65.1
MS.gene068234.t1 AT1G47760 34.483 116 61 3 9 123 2 103 2.77e-12 63.9
MS.gene068234.t1 AT5G65050 43.478 69 38 1 9 76 2 70 3.17e-12 63.5
MS.gene068234.t1 AT5G65070 40.580 69 40 1 9 76 2 70 5.10e-12 62.4
MS.gene068234.t1 AT5G65050 43.478 69 38 1 9 76 2 70 6.29e-12 62.8
MS.gene068234.t1 AT5G65050 43.478 69 38 1 9 76 2 70 6.46e-12 63.2
MS.gene068234.t1 AT5G65050 43.478 69 38 1 9 76 2 70 7.02e-12 62.8
MS.gene068234.t1 AT5G65060 43.478 69 38 1 9 76 2 70 8.64e-12 62.8
MS.gene068234.t1 AT5G65070 40.580 69 40 1 9 76 2 70 1.03e-11 62.4
MS.gene068234.t1 AT5G65060 43.478 69 38 1 9 76 2 70 1.11e-11 62.0
MS.gene068234.t1 AT1G71692 42.029 69 39 1 10 77 3 71 1.21e-11 62.4
MS.gene068234.t1 AT5G65060 43.478 69 38 1 9 76 2 70 1.26e-11 62.4
MS.gene068234.t1 AT5G65070 40.580 69 40 1 9 76 2 70 1.86e-11 62.4
MS.gene068234.t1 AT5G65070 40.580 69 40 1 9 76 2 70 2.06e-11 62.0
MS.gene068234.t1 AT4G37435 37.349 83 46 2 9 85 2 84 4.73e-11 60.5
MS.gene068234.t1 AT1G46408 35.294 119 68 4 10 119 5 123 6.57e-11 61.2
MS.gene068234.t1 AT5G49420 35.106 94 54 2 5 91 3 96 8.71e-11 61.2

Find 55 sgRNAs with CRISPR-Local

Find 78 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTGTTTGGTTTCAACAATA+TGG 0.234944 8.1:-61023245 MS.gene068234:CDS
ATTTGAGTTTGCGGAGGATT+TGG 0.289021 8.1:+61023310 None:intergenic
TCTTCTCCATGTCCAGTAAC+TGG 0.302941 8.1:+61023569 None:intergenic
TGGTGGGCTGGTCCCGTTGA+TGG 0.316276 8.1:-61023496 MS.gene068234:CDS
AGGCGACCGAGGCTCAATTT+TGG 0.319875 8.1:-61023516 MS.gene068234:CDS
TTGTTTGGTTTCAACAATAT+GGG 0.352555 8.1:-61023244 MS.gene068234:CDS
GACTCAGATCAACCAGTTAC+TGG 0.372422 8.1:-61023581 MS.gene068234:CDS
ATGTTGCAGTCTCATTTGTT+TGG 0.376821 8.1:-61023259 MS.gene068234:CDS
TGCTGATAGGCTTGTAATCC+AGG 0.383576 8.1:-61023404 MS.gene068234:CDS
ATTGCATGGTACCATTGTTT+TGG 0.409018 8.1:+61023653 None:intergenic
GTCCCGTTGATGGGATGAAT+AGG 0.432754 8.1:-61023486 MS.gene068234:CDS
TTTGGATGAGACTAAGAAAC+TGG 0.433965 8.1:-61023437 MS.gene068234:CDS
GCGGAGGATTTGGTTGATGA+TGG 0.439291 8.1:+61023320 None:intergenic
AACAAATGAGACTGCAACAT+AGG 0.451158 8.1:+61023262 None:intergenic
GGTGGGCTGGTCCCGTTGAT+GGG 0.452333 8.1:-61023495 MS.gene068234:CDS
TCCCGTTGATGGGATGAATA+GGG 0.453040 8.1:-61023485 MS.gene068234:CDS
TGGTTGCACATCATGCTGAT+AGG 0.453644 8.1:-61023417 MS.gene068234:CDS
CCTCGGTCGCCTTGCGCAAG+TGG 0.465805 8.1:+61023527 None:intergenic
CTCTATGACCGTATCAACAT+TGG 0.477809 8.1:+61023699 None:intergenic
GCCCTATTCATCCCATCAAC+GGG 0.481029 8.1:+61023484 None:intergenic
GGAGGTGGATATGGACCCTC+TGG 0.496777 8.1:-61023218 MS.gene068234:CDS
ATGATGGAGAGGCATGTTAG+AGG 0.501643 8.1:+61023336 None:intergenic
GCTGGAAACATTTGAGTTTG+CGG 0.508183 8.1:+61023301 None:intergenic
ACTGAGAGTGCAAAGCTCAC+TGG 0.526727 8.1:+61023783 None:intergenic
GGCCCTATTCATCCCATCAA+CGG 0.536262 8.1:+61023483 None:intergenic
TCTATGACCGTATCAACATT+GGG 0.539713 8.1:+61023700 None:intergenic
TGGCCAACCCAATGTTGATA+CGG 0.545005 8.1:-61023707 MS.gene068234:CDS
TGTTTGGTTTCAACAATATG+GGG 0.547142 8.1:-61023243 MS.gene068234:CDS
TTAAGGTGGATCTAAGGGCT+CGG 0.548099 8.1:+61023184 None:intergenic
CCACTTGCGCAAGGCGACCG+AGG 0.551221 8.1:-61023527 MS.gene068234:CDS
CTTTCTCGAAGCGCCGTAGT+GGG 0.553366 8.1:-61023819 MS.gene068234:CDS
ATTCAACCATGTCGAGTGGA+AGG 0.567884 8.1:-61023906 None:intergenic
ACAAATGAGACTGCAACATA+GGG 0.571944 8.1:+61023263 None:intergenic
ACTTTCTCGAAGCGCCGTAG+TGG 0.571963 8.1:-61023820 MS.gene068234:CDS
GCTCACGCACATTGGCGCTA+CGG 0.585858 8.1:+61023617 None:intergenic
GATCAACCAGTTACTGGACA+TGG 0.586550 8.1:-61023575 MS.gene068234:CDS
AATGAAAATACCTTCTCCCC+AGG 0.587583 8.1:+61023730 None:intergenic
AGCCCACCAAAATTGAGCCT+CGG 0.589062 8.1:+61023510 None:intergenic
TGACCGTATCAACATTGGGT+TGG 0.600758 8.1:+61023704 None:intergenic
TGGTTTGAGTAGGAGCACCC+TGG 0.605264 8.1:+61023386 None:intergenic
AGTGAGCTTTGCACTCTCAG+TGG 0.609659 8.1:-61023781 MS.gene068234:CDS
AGAGCTGAACCACTTGCGCA+AGG 0.610527 8.1:-61023536 MS.gene068234:CDS
CTTTCTTGAAGAGCCCACTA+CGG 0.610979 8.1:+61023806 None:intergenic
GGATTTGGTTGATGATGGAG+AGG 0.611456 8.1:+61023325 None:intergenic
AGTATTGAGCTCACGCACAT+TGG 0.613452 8.1:+61023609 None:intergenic
TGTGATTCAACCATGTCGAG+TGG 0.620546 8.1:-61023910 None:intergenic
GTTTGGTTTCAACAATATGG+GGG 0.628945 8.1:-61023242 MS.gene068234:CDS
GCTGATAGGCTTGTAATCCA+GGG 0.636302 8.1:-61023403 MS.gene068234:CDS
TGGTACCATGCAATTCATTG+AGG 0.638950 8.1:-61023644 MS.gene068234:CDS
GTGAGCCTCAATGAATTGCA+TGG 0.640763 8.1:+61023639 None:intergenic
GGAAACATTTGAGTTTGCGG+AGG 0.647148 8.1:+61023304 None:intergenic
CGAGTCCCACACCAAAACAA+TGG 0.664538 8.1:-61023664 MS.gene068234:CDS
TCGGATCAAAAGAATCCAGA+GGG 0.678771 8.1:+61023203 None:intergenic
CTCGGATCAAAAGAATCCAG+AGG 0.678961 8.1:+61023202 None:intergenic
TCGAGTGGAAGGAAAAGCCG+AGG 0.691796 8.1:-61023895 MS.gene068234:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CTTTTTGAAAAATTCAAGTT+GGG + chr8.1:61023634-61023653 None:intergenic 20.0%
!!! TTTTTTTCATCTCAATCTTT+TGG + chr8.1:61023227-61023246 None:intergenic 20.0%
! ATTTCCAACAAAAAATGGAA+TGG + chr8.1:61023730-61023749 None:intergenic 25.0%
!! TTGTTTGGTTTCAACAATAT+GGG - chr8.1:61023849-61023868 MS.gene068234:CDS 25.0%
!! TTTGTTTGGTTTCAACAATA+TGG - chr8.1:61023848-61023867 MS.gene068234:CDS 25.0%
!!! ATTCCATTTTTTGTTGGAAA+TGG - chr8.1:61023729-61023748 MS.gene068234:CDS 25.0%
!!! CCAACTTGAATTTTTCAAAA+AGG - chr8.1:61023632-61023651 MS.gene068234:CDS 25.0%
!!! CCTTTTTGAAAAATTCAAGT+TGG + chr8.1:61023635-61023654 None:intergenic 25.0%
!!! TGAATTTTTCAAAAAGGCTT+TGG - chr8.1:61023638-61023657 MS.gene068234:CDS 25.0%
AAAAATGGAATGGTTTGAGT+AGG + chr8.1:61023720-61023739 None:intergenic 30.0%
GAACCATTTCCAACAAAAAA+TGG + chr8.1:61023735-61023754 None:intergenic 30.0%
! TGTTTGGTTTCAACAATATG+GGG - chr8.1:61023850-61023869 MS.gene068234:CDS 30.0%
!!! CAAACCATTCCATTTTTTGT+TGG - chr8.1:61023723-61023742 MS.gene068234:CDS 30.0%
AACAAATGAGACTGCAACAT+AGG + chr8.1:61023834-61023853 None:intergenic 35.0%
ACAAATGAGACTGCAACATA+GGG + chr8.1:61023833-61023852 None:intergenic 35.0%
ATGTTGCAGTCTCATTTGTT+TGG - chr8.1:61023834-61023853 MS.gene068234:CDS 35.0%
TCTATGACCGTATCAACATT+GGG + chr8.1:61023396-61023415 None:intergenic 35.0%
TTTGGATGAGACTAAGAAAC+TGG - chr8.1:61023656-61023675 MS.gene068234:CDS 35.0%
! ATTGCATGGTACCATTGTTT+TGG + chr8.1:61023443-61023462 None:intergenic 35.0%
! GTTTGGTTTCAACAATATGG+GGG - chr8.1:61023851-61023870 MS.gene068234:CDS 35.0%
AATGAAAATACCTTCTCCCC+AGG + chr8.1:61023366-61023385 None:intergenic 40.0%
CTCTATGACCGTATCAACAT+TGG + chr8.1:61023397-61023416 None:intergenic 40.0%
TCGGATCAAAAGAATCCAGA+GGG + chr8.1:61023893-61023912 None:intergenic 40.0%
TGGTACCATGCAATTCATTG+AGG - chr8.1:61023449-61023468 MS.gene068234:CDS 40.0%
! ATTTGAGTTTGCGGAGGATT+TGG + chr8.1:61023786-61023805 None:intergenic 40.0%
! GCTGGAAACATTTGAGTTTG+CGG + chr8.1:61023795-61023814 None:intergenic 40.0%
!! GGGTTCTGAAAAAATTGTGC+TGG + chr8.1:61023813-61023832 None:intergenic 40.0%
!!! ATGGTACCATTGTTTTGGTG+TGG + chr8.1:61023438-61023457 None:intergenic 40.0%
!!! GGGGAGAAGGTATTTTCATT+TGG - chr8.1:61023366-61023385 MS.gene068234:CDS 40.0%
!!! TGGTACCATTGTTTTGGTGT+GGG + chr8.1:61023437-61023456 None:intergenic 40.0%
CTCGGATCAAAAGAATCCAG+AGG + chr8.1:61023894-61023913 None:intergenic 45.0%
CTTTCTTGAAGAGCCCACTA+CGG + chr8.1:61023290-61023309 None:intergenic 45.0%
GACTCAGATCAACCAGTTAC+TGG - chr8.1:61023512-61023531 MS.gene068234:CDS 45.0%
GATCAACCAGTTACTGGACA+TGG - chr8.1:61023518-61023537 MS.gene068234:CDS 45.0%
GCTGATAGGCTTGTAATCCA+GGG - chr8.1:61023690-61023709 MS.gene068234:CDS 45.0%
GTGAGCCTCAATGAATTGCA+TGG + chr8.1:61023457-61023476 None:intergenic 45.0%
TCTTCTCCATGTCCAGTAAC+TGG + chr8.1:61023527-61023546 None:intergenic 45.0%
TGACCGTATCAACATTGGGT+TGG + chr8.1:61023392-61023411 None:intergenic 45.0%
TGCTGATAGGCTTGTAATCC+AGG - chr8.1:61023689-61023708 MS.gene068234:CDS 45.0%
TGGCCAACCCAATGTTGATA+CGG - chr8.1:61023386-61023405 MS.gene068234:CDS 45.0%
TGGTTGCACATCATGCTGAT+AGG - chr8.1:61023676-61023695 MS.gene068234:CDS 45.0%
TGGTTTCAACAATATGGGGG+AGG - chr8.1:61023854-61023873 MS.gene068234:CDS 45.0%
TTTCAACAATATGGGGGAGG+AGG - chr8.1:61023857-61023876 MS.gene068234:CDS 45.0%
! AGTATTGAGCTCACGCACAT+TGG + chr8.1:61023487-61023506 None:intergenic 45.0%
! ATGATGGAGAGGCATGTTAG+AGG + chr8.1:61023760-61023779 None:intergenic 45.0%
! GGAAACATTTGAGTTTGCGG+AGG + chr8.1:61023792-61023811 None:intergenic 45.0%
! TCCCGTTGATGGGATGAATA+GGG - chr8.1:61023608-61023627 MS.gene068234:CDS 45.0%
! TCTCAATCTTTTGGCGACCT+CGG + chr8.1:61023218-61023237 None:intergenic 45.0%
!! CTCTCGTTGTTTTCTCACCT+GGG - chr8.1:61023346-61023365 MS.gene068234:CDS 45.0%
!! GGATTTGGTTGATGATGGAG+AGG + chr8.1:61023771-61023790 None:intergenic 45.0%
!! TCTCGTTGTTTTCTCACCTG+GGG - chr8.1:61023347-61023366 MS.gene068234:CDS 45.0%
AGCCCACCAAAATTGAGCCT+CGG + chr8.1:61023586-61023605 None:intergenic 50.0%
AGTGAGCTTTGCACTCTCAG+TGG - chr8.1:61023312-61023331 MS.gene068234:CDS 50.0%
CGAGTCCCACACCAAAACAA+TGG - chr8.1:61023429-61023448 MS.gene068234:CDS 50.0%
GCCCTATTCATCCCATCAAC+GGG + chr8.1:61023612-61023631 None:intergenic 50.0%
GGCCCTATTCATCCCATCAA+CGG + chr8.1:61023613-61023632 None:intergenic 50.0%
! ACTGAGAGTGCAAAGCTCAC+TGG + chr8.1:61023313-61023332 None:intergenic 50.0%
! GTCCCGTTGATGGGATGAAT+AGG - chr8.1:61023607-61023626 MS.gene068234:CDS 50.0%
! TGTTTTCTCACCTGGGGAGA+AGG - chr8.1:61023353-61023372 MS.gene068234:CDS 50.0%
!! GACCGAGGCTCAATTTTGGT+GGG - chr8.1:61023581-61023600 MS.gene068234:CDS 50.0%
!! GCGGAGGATTTGGTTGATGA+TGG + chr8.1:61023776-61023795 None:intergenic 50.0%
!! GCTCTCGTTGTTTTCTCACC+TGG - chr8.1:61023345-61023364 MS.gene068234:CDS 50.0%
AGAGCTGAACCACTTGCGCA+AGG - chr8.1:61023557-61023576 MS.gene068234:CDS 55.0%
CAACAATATGGGGGAGGAGG+TGG - chr8.1:61023860-61023879 MS.gene068234:CDS 55.0%
TATGGGGGAGGAGGTGGATA+TGG - chr8.1:61023866-61023885 MS.gene068234:CDS 55.0%
TCGAGTGGAAGGAAAAGCCG+AGG - chr8.1:61023198-61023217 MS.gene068234:CDS 55.0%
! AGGCGACCGAGGCTCAATTT+TGG - chr8.1:61023577-61023596 MS.gene068234:CDS 55.0%
! CGACCGAGGCTCAATTTTGG+TGG - chr8.1:61023580-61023599 MS.gene068234:CDS 55.0%
!! ACTTTCTCGAAGCGCCGTAG+TGG - chr8.1:61023273-61023292 MS.gene068234:CDS 55.0%
!! CTTTCTCGAAGCGCCGTAGT+GGG - chr8.1:61023274-61023293 MS.gene068234:CDS 55.0%
!! GAGGCTCAATTTTGGTGGGC+TGG - chr8.1:61023585-61023604 MS.gene068234:CDS 55.0%
!! TGGTTTGAGTAGGAGCACCC+TGG + chr8.1:61023710-61023729 None:intergenic 55.0%
GCTCACGCACATTGGCGCTA+CGG + chr8.1:61023479-61023498 None:intergenic 60.0%
GGAGGTGGATATGGACCCTC+TGG - chr8.1:61023875-61023894 MS.gene068234:CDS 60.0%
!! GGTGGGCTGGTCCCGTTGAT+GGG - chr8.1:61023598-61023617 MS.gene068234:CDS 65.0%
!! TGGTGGGCTGGTCCCGTTGA+TGG - chr8.1:61023597-61023616 MS.gene068234:CDS 65.0%
CCACTTGCGCAAGGCGACCG+AGG - chr8.1:61023566-61023585 MS.gene068234:CDS 70.0%
CCTCGGTCGCCTTGCGCAAG+TGG + chr8.1:61023569-61023588 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr8.1 gene 61023195 61023920 61023195 ID=MS.gene068234
chr8.1 mRNA 61023195 61023920 61023195 ID=MS.gene068234.t1;Parent=MS.gene068234
chr8.1 exon 61023195 61023920 61023195 ID=MS.gene068234.t1.exon1;Parent=MS.gene068234.t1
chr8.1 CDS 61023195 61023920 61023195 ID=cds.MS.gene068234.t1;Parent=MS.gene068234.t1
Gene Sequence

>MS.gene068234

ATGTCGAGTGGAAGGAAAAGCCGAGGTCGCCAAAAGATTGAGATGAAAAAAATGAGCAACGAGAGCAACTTGCAAGTGACTTTCTCGAAGCGCCGTAGTGGGCTCTTCAAGAAAGCCAGTGAGCTTTGCACTCTCAGTGGTGCAGATGTTGCTCTCGTTGTTTTCTCACCTGGGGAGAAGGTATTTTCATTTGGCCAACCCAATGTTGATACGGTCATAGAGCGTTATCTCTCTCGAGTCCCACACCAAAACAATGGTACCATGCAATTCATTGAGGCTCACCGTAGCGCCAATGTGCGTGAGCTCAATACTCAGCTGACTCAGATCAACCAGTTACTGGACATGGAGAAGAAACGTGCTGAAGAGCTGAACCACTTGCGCAAGGCGACCGAGGCTCAATTTTGGTGGGCTGGTCCCGTTGATGGGATGAATAGGGCCCAACTTGAATTTTTCAAAAAGGCTTTGGATGAGACTAAGAAACTGGTTGCACATCATGCTGATAGGCTTGTAATCCAGGGTGCTCCTACTCAAACCATTCCATTTTTTGTTGGAAATGGTTCATCCTCTAACATGCCTCTCCATCATCAACCAAATCCTCCGCAAACTCAAATGTTTCCAGCACAATTTTTTCAGAACCCTATGTTGCAGTCTCATTTGTTTGGTTTCAACAATATGGGGGAGGAGGTGGATATGGACCCTCTGGATTCTTTTGATCCGAGCCCTTAG
Protein sequence

>MS.gene068234.t1

MSSGRKSRGRQKIEMKKMSNESNLQVTFSKRRSGLFKKASELCTLSGADVALVVFSPGEKVFSFGQPNVDTVIERYLSRVPHQNNGTMQFIEAHRSANVRELNTQLTQINQLLDMEKKRAEELNHLRKATEAQFWWAGPVDGMNRAQLEFFKKALDETKKLVAHHADRLVIQGAPTQTIPFFVGNGSSSNMPLHHQPNPPQTQMFPAQFFQNPMLQSHLFGFNNMGEEVDMDPLDSFDPSP