AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene069134

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene069134.t1 MTR_5g031720 96.506 601 16 1 1 601 1 596 0.0 1181
MS.gene069134.t1 MTR_5g049770 79.070 215 41 2 380 593 28 239 1.98e-111 333
MS.gene069134.t1 MTR_5g049770 41.270 189 92 7 145 317 26 211 1.07e-25 106
MS.gene069134.t1 MTR_4g093650 35.188 611 332 16 37 595 13 611 2.18e-94 302
MS.gene069134.t1 MTR_2g009650 36.157 484 251 12 18 446 18 498 2.34e-73 250
MS.gene069134.t1 MTR_2g009650 58.974 78 31 1 518 595 685 761 2.42e-17 86.3
MS.gene069134.t1 MTR_3g110650 29.037 675 357 20 26 601 10 661 7.26e-52 189
MS.gene069134.t1 MTR_4g008080 32.877 438 229 13 27 449 1 388 7.69e-46 171
MS.gene069134.t1 MTR_4g008080 29.386 228 138 7 8 227 186 398 2.20e-18 89.4
MS.gene069134.t1 MTR_4g008080 44.186 86 46 2 511 595 514 598 3.84e-11 66.2
MS.gene069134.t1 MTR_2g019090 25.828 604 379 14 44 595 42 628 1.64e-44 168
MS.gene069134.t1 MTR_3g091800 25.289 605 376 16 45 599 64 642 4.51e-44 167
MS.gene069134.t1 MTR_6g012630 30.485 433 279 10 30 451 33 454 1.27e-39 152
MS.gene069134.t1 MTR_6g012630 28.351 194 129 3 278 463 45 236 7.32e-17 84.3
MS.gene069134.t1 MTR_6g012630 30.485 433 279 10 30 451 33 454 1.66e-39 152
MS.gene069134.t1 MTR_6g012630 28.571 196 126 4 278 463 45 236 8.05e-17 84.3
MS.gene069134.t1 MTR_2g019090 24.956 565 357 12 44 556 42 591 1.11e-38 151
MS.gene069134.t1 MTR_6g012630 30.788 406 259 10 30 424 33 427 2.37e-36 142
MS.gene069134.t1 MTR_6g012630 28.351 194 129 3 278 463 45 236 5.57e-17 84.3
MS.gene069134.t1 MTR_7g011080 30.184 434 277 10 34 451 39 462 3.48e-34 137
MS.gene069134.t1 MTR_5g031580 97.917 48 1 0 554 601 14 61 3.26e-24 96.3
MS.gene069134.t1 MTR_5g049760 88.000 50 1 1 1 50 1 45 9.60e-24 94.7
MS.gene069134.t1 MTR_5g031530 100.000 48 0 0 554 601 13 60 1.36e-23 94.4
MS.gene069134.t1 MTR_7g080630 26.590 346 182 11 263 595 83 369 5.58e-20 92.8
MS.gene069134.t1 MTR_7g080630 25.767 326 171 13 24 325 69 347 3.53e-13 72.0
MS.gene069134.t1 MTR_4g127380 33.155 187 104 4 24 201 27 201 3.57e-19 90.9
MS.gene069134.t1 MTR_4g127380 30.435 184 119 4 281 462 45 221 3.08e-12 69.3
MS.gene069134.t1 MTR_2g038020 34.118 170 94 4 41 201 67 227 4.86e-18 87.8
MS.gene069134.t1 MTR_2g038020 29.143 175 121 3 281 453 71 244 1.93e-12 70.1
MS.gene069134.t1 MTR_7g080630 30.986 213 132 5 263 463 83 292 2.44e-16 80.5
MS.gene069134.t1 MTR_7g080630 28.571 196 115 8 44 226 100 283 9.32e-13 69.7
MS.gene069134.t1 MTR_7g080630 30.986 213 132 5 263 463 83 292 2.91e-16 80.5
MS.gene069134.t1 MTR_7g080630 28.571 196 115 8 44 226 100 283 1.41e-12 69.3
MS.gene069134.t1 MTR_7g115340 28.736 174 111 4 40 209 43 207 9.47e-15 77.4
MS.gene069134.t1 MTR_7g115340 28.736 174 111 4 40 209 111 275 2.57e-14 76.3
MS.gene069134.t1 MTR_1g070380 27.374 179 111 4 40 209 161 329 3.45e-13 72.8
MS.gene069134.t1 MTR_5g031500 75.556 45 10 1 554 598 39 82 9.29e-13 65.1
MS.gene069134.t1 MTR_1g070380 27.222 180 111 4 40 209 161 330 1.55e-12 70.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene069134.t1 AT2G22600 35.535 636 321 15 31 595 12 629 1.11e-104 330
MS.gene069134.t1 AT1G51580 31.122 633 330 19 44 600 19 621 4.55e-67 230
MS.gene069134.t1 AT1G51580 33.333 195 110 6 16 204 248 428 3.25e-19 92.0
MS.gene069134.t1 AT5G46190 26.518 626 362 17 44 597 44 643 8.44e-47 174
MS.gene069134.t1 AT5G46190 28.070 171 107 3 43 210 316 473 4.49e-12 69.3
MS.gene069134.t1 AT5G46190 26.518 626 362 17 44 597 44 643 8.44e-47 174
MS.gene069134.t1 AT5G46190 28.070 171 107 3 43 210 316 473 4.49e-12 69.3
MS.gene069134.t1 AT5G46190 26.518 626 362 17 44 597 44 643 8.44e-47 174
MS.gene069134.t1 AT5G46190 28.070 171 107 3 43 210 316 473 4.49e-12 69.3
MS.gene069134.t1 AT5G53060 28.690 603 357 20 46 599 70 648 2.46e-46 173
MS.gene069134.t1 AT5G15270 31.579 475 291 13 46 506 52 506 1.09e-44 167
MS.gene069134.t1 AT5G15270 33.143 175 107 3 281 447 51 223 3.00e-18 88.6
MS.gene069134.t1 AT5G15270 31.579 475 291 13 46 506 52 506 1.31e-44 167
MS.gene069134.t1 AT5G15270 33.143 175 107 3 281 447 51 223 3.24e-18 88.6
MS.gene069134.t1 AT5G15270 31.579 475 291 13 46 506 52 506 1.31e-44 167
MS.gene069134.t1 AT5G15270 33.143 175 107 3 281 447 51 223 3.24e-18 88.6
MS.gene069134.t1 AT5G46190 24.888 671 361 18 44 597 44 688 1.49e-39 154
MS.gene069134.t1 AT5G46190 28.070 171 107 3 43 210 316 473 6.54e-12 68.9
MS.gene069134.t1 AT5G53060 29.371 429 260 11 46 446 70 483 1.63e-39 153
MS.gene069134.t1 AT5G53060 27.566 341 208 12 282 597 70 396 1.57e-12 70.9
MS.gene069134.t1 AT4G18375 24.267 614 361 19 44 597 36 605 2.83e-36 144
MS.gene069134.t1 AT5G09560 26.957 460 259 11 44 446 30 469 6.12e-31 128
MS.gene069134.t1 AT5G64390 37.500 192 102 3 42 219 45 232 1.06e-28 122
MS.gene069134.t1 AT5G64390 40.659 182 93 3 278 452 450 623 1.13e-27 119
MS.gene069134.t1 AT5G64390 27.551 196 116 4 22 210 440 616 7.68e-19 91.3
MS.gene069134.t1 AT5G64390 37.500 192 102 3 42 219 45 232 1.19e-28 122
MS.gene069134.t1 AT5G64390 40.659 182 93 3 278 452 450 623 1.23e-27 119
MS.gene069134.t1 AT5G64390 27.551 196 116 4 22 210 440 616 7.89e-19 91.3
MS.gene069134.t1 AT5G64390 57.143 84 35 1 518 601 776 858 9.19e-17 84.7
MS.gene069134.t1 AT5G64390 37.500 192 102 3 42 219 45 232 1.28e-28 122
MS.gene069134.t1 AT5G64390 40.659 182 93 3 278 452 450 623 1.26e-27 119
MS.gene069134.t1 AT5G64390 27.551 196 116 4 22 210 440 616 8.40e-19 91.3
MS.gene069134.t1 AT5G64390 56.977 86 36 1 516 601 765 849 3.00e-17 86.3
MS.gene069134.t1 AT4G18375 24.464 466 280 12 44 461 36 477 4.36e-27 115
MS.gene069134.t1 AT1G14170 28.434 415 252 10 46 446 13 396 1.15e-26 113
MS.gene069134.t1 AT1G14170 28.297 417 254 10 46 448 21 406 1.49e-26 113
MS.gene069134.t1 AT1G14170 28.297 417 254 10 46 448 46 431 1.91e-26 113
MS.gene069134.t1 AT4G26000 32.941 170 96 4 41 201 71 231 2.42e-18 89.0
MS.gene069134.t1 AT4G26000 27.467 375 218 14 258 595 50 407 1.53e-15 80.1
MS.gene069134.t1 AT3G04610 25.989 354 217 12 281 600 164 506 1.79e-12 70.5
MS.gene069134.t1 AT3G04610 27.841 176 111 4 40 208 159 325 3.01e-12 69.7
MS.gene069134.t1 AT3G04610 25.989 354 217 12 281 600 164 506 1.79e-12 70.5
MS.gene069134.t1 AT3G04610 27.841 176 111 4 40 208 159 325 3.01e-12 69.7
MS.gene069134.t1 AT3G04610 27.841 176 111 4 40 208 183 349 2.12e-12 70.5
MS.gene069134.t1 AT3G04610 32.530 166 107 4 281 444 188 350 4.68e-12 69.3
MS.gene069134.t1 AT3G04610 27.841 176 111 4 40 208 183 349 2.12e-12 70.5
MS.gene069134.t1 AT3G04610 32.530 166 107 4 281 444 188 350 4.68e-12 69.3

Find 149 sgRNAs with CRISPR-Local

Find 370 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTAACAGTATCTTTATTTAA+AGG 0.143435 5.3:+20486138 None:intergenic
GTAAAATCACTTCTATAATT+AGG 0.149460 5.3:-20486215 MS.gene069134:CDS
ATAATAGTGGTTCTAATATT+AGG 0.149891 5.3:-20489598 MS.gene069134:CDS
GACTGACGATAGGGTTATTT+TGG 0.183479 5.3:-20489840 MS.gene069134:CDS
TGTTTCTGGGACCAGATTTC+AGG 0.214487 5.3:-20484922 MS.gene069134:intron
CATGTCTTTGGTTCTGTTTA+TGG 0.268455 5.3:-20485578 MS.gene069134:CDS
GTGGTGGTGGTTGTGGGTGG+TGG 0.271313 5.3:+20490050 None:intergenic
GGTGGGTTGATCGGAAGTTC+AGG 0.287245 5.3:-20489929 MS.gene069134:CDS
ATTGTCTTTGCCCCTCCTTT+AGG 0.294721 5.3:-20487780 MS.gene069134:CDS
TCCACTTGTACCGGTGCTGC+TGG 0.296182 5.3:+20484876 None:intergenic
TAAAATCACTTCTATAATTA+GGG 0.310912 5.3:-20486214 MS.gene069134:CDS
GGAGGGAAGGTTGTGATATC+TGG 0.316287 5.3:-20484856 MS.gene069134:CDS
TTGGCACATAGTTCTCAAAT+TGG 0.322433 5.3:-20489665 MS.gene069134:CDS
TAATAGTGGTTCTAATATTA+GGG 0.324572 5.3:-20489597 MS.gene069134:CDS
ATGCACAAGAAGGTGTTGTT+AGG 0.326843 5.3:-20489754 MS.gene069134:CDS
ATTAAAAGCCTCGCAGTTAC+AGG 0.344522 5.3:+20487526 None:intergenic
TAATTCATGGTTACCTTCAA+TGG 0.351322 5.3:-20487988 MS.gene069134:CDS
TTGAAGGTAACCATGAATTA+AGG 0.351702 5.3:+20487991 None:intergenic
GGAAGAATATAAGTAATATT+AGG 0.355385 5.3:-20489622 MS.gene069134:CDS
ATAGTCTCAGAGCATGTCTT+TGG 0.359338 5.3:-20485590 MS.gene069134:CDS
TTCAACGGCGGCGGAGAAAG+TGG 0.361395 5.3:+20490084 None:intergenic
GGATCGAAAAGGGATTGTTT+TGG 0.364192 5.3:-20489801 MS.gene069134:CDS
ATAGATAAACCTTCCATTGA+AGG 0.366335 5.3:+20487975 None:intergenic
CTTTAAATAAAGATACTGTT+AGG 0.366560 5.3:-20486137 MS.gene069134:CDS
TGCTTCAGCAAGCACCTCAT+TGG 0.367887 5.3:+20486179 None:intergenic
TCTGAAAACAACTGCTTGTC+CGG 0.382650 5.3:+20487890 None:intergenic
TCTCAAATTGGTGCTATTGT+TGG 0.387365 5.3:-20489653 MS.gene069134:CDS
GGGGAAATGGTGAAGTTTAT+GGG 0.388390 5.3:-20489694 MS.gene069134:CDS
TTATCTGAAGCATTAGGAAT+TGG 0.392353 5.3:+20487403 None:intergenic
TTGTTTGATTGGCAGATAAC+TGG 0.395621 5.3:-20488164 MS.gene069134:intron
GCAGATAACTGGTGAAAGTT+TGG 0.404422 5.3:-20488153 MS.gene069134:intron
AGCCTTGACTCAAAAGGTTC+CGG 0.414704 5.3:-20487909 MS.gene069134:CDS
CAGGAGAATTACTTGATTCA+AGG 0.415861 5.3:+20487635 None:intergenic
AGACAATAGAAGCACCAGTT+TGG 0.418301 5.3:+20487796 None:intergenic
GTGGTGGTGGTGGTTGTGGG+TGG 0.422185 5.3:+20490047 None:intergenic
ACTGCGAGGATGCGGTGGTT+GGG 0.428519 5.3:-20489862 MS.gene069134:CDS
CTTGTATATTTGCAGAATGC+AGG 0.433629 5.3:-20485966 MS.gene069134:intron
TCTCAGCTCCGGCGAGAAAC+CGG 0.437451 5.3:-20489896 MS.gene069134:CDS
GCTGAAGATCACATTCGAAA+TGG 0.439609 5.3:-20487577 MS.gene069134:CDS
GTCTGTCATTCGTCAACGGT+TGG 0.440219 5.3:-20489950 MS.gene069134:CDS
AAGATCCTCATGTGTGTAAG+AGG 0.441328 5.3:+20488022 None:intergenic
ATTGGTGCTATTGTTGGAAA+AGG 0.443461 5.3:-20489647 MS.gene069134:CDS
GCTTCAGCAAGCACCTCATT+GGG 0.447960 5.3:+20486180 None:intergenic
ACATCATTATCTGAAGCATT+AGG 0.450838 5.3:+20487397 None:intergenic
AGGGGTGTATCAAACTAAAA+AGG 0.457022 5.3:-20485946 MS.gene069134:CDS
CACTGCGAGGATGCGGTGGT+TGG 0.458500 5.3:-20489863 MS.gene069134:CDS
CATTTATTGACTGGTAATGA+AGG 0.460032 5.3:-20487487 MS.gene069134:CDS
GGGTCGATGTCGGATCGAAA+AGG 0.463768 5.3:-20489812 MS.gene069134:CDS
GGGTCAGATCGCGTTTCGTT+TGG 0.464151 5.3:-20489972 MS.gene069134:CDS
CGCTCTTCATACTGACCTAA+AGG 0.469766 5.3:+20487765 None:intergenic
CAATTTAGATCGAATTAGAC+AGG 0.471269 5.3:-20485543 MS.gene069134:intron
ATTGACTGGTAATGAAGGTC+AGG 0.471664 5.3:-20487482 MS.gene069134:CDS
CACCACCGTCGTCGTTGAAA+CGG 0.472880 5.3:-20490030 MS.gene069134:CDS
TCTTTATTTAAAGGAAAACT+TGG 0.475566 5.3:+20486147 None:intergenic
CGGTGGTTGGGACTGACGAT+AGG 0.481701 5.3:-20489850 MS.gene069134:CDS
CAACTATTAACTCGTCTGAT+AGG 0.481981 5.3:-20488049 MS.gene069134:CDS
GGTTCTGTTTATGGTGAAGA+TGG 0.482448 5.3:-20485569 MS.gene069134:CDS
TCAACGGCGGCGGAGAAAGT+GGG 0.487788 5.3:+20490085 None:intergenic
AGTAATATTAGGAATAATAG+TGG 0.489092 5.3:-20489611 MS.gene069134:CDS
GGTCGATGTCGGATCGAAAA+GGG 0.489118 5.3:-20489811 MS.gene069134:CDS
TGCACAAGAAGGTGTTGTTA+GGG 0.491683 5.3:-20489753 MS.gene069134:CDS
ACCCGGTAGAAGTTTGAAAA+CGG 0.492942 5.3:+20489991 None:intergenic
CCCGGTAGAAGTTTGAAAAC+GGG 0.493933 5.3:+20489992 None:intergenic
GTCATTCGTCAACGGTTGGT+GGG 0.494900 5.3:-20489946 MS.gene069134:CDS
TCAACGGTTGGTGGGTTGAT+CGG 0.497535 5.3:-20489938 MS.gene069134:CDS
AGCACGTTACATTTATTGAC+TGG 0.502822 5.3:-20487496 MS.gene069134:CDS
TGAGCTGCAAATGTTTGATC+AGG 0.504272 5.3:+20484829 None:intergenic
TTGTGGGTGGTGGTGATCAG+TGG 0.505493 5.3:+20490060 None:intergenic
CCACTTGTACCGGTGCTGCT+GGG 0.508804 5.3:+20484877 None:intergenic
TGTGGTAGAAACCTCGCAAA+AGG 0.510464 5.3:+20486081 None:intergenic
TTCAACGACGACGGTGGTGG+TGG 0.510744 5.3:+20490034 None:intergenic
AACTCTAGCCTTGACTCAAA+AGG 0.511462 5.3:-20487915 MS.gene069134:CDS
GCAAGCACCTCATTGGGTAA+AGG 0.515760 5.3:+20486186 None:intergenic
GGTGATTCCACAGCAGTGGC+TGG 0.521992 5.3:+20487547 None:intergenic
AACCTCGCAAAAGGAAAAGA+AGG 0.524946 5.3:+20486090 None:intergenic
TCTTCAAGATTGTCCACCGA+TGG 0.525660 5.3:-20488096 MS.gene069134:CDS
AACGACGACGGTGGTGGTGG+TGG 0.525846 5.3:+20490037 None:intergenic
TTGTATATTTGCAGAATGCA+GGG 0.526025 5.3:-20485965 MS.gene069134:intron
CAAAATCCACTGCGAGGATG+CGG 0.528018 5.3:-20489870 MS.gene069134:CDS
GGTCAATCGTTTCTCAGCTC+CGG 0.528256 5.3:-20489907 MS.gene069134:CDS
AGATAATGATGTGGTAGTCC+AGG 0.528924 5.3:-20487386 MS.gene069134:intron
TCATGGTTACCTTCAATGGA+AGG 0.529880 5.3:-20487984 MS.gene069134:CDS
TGTCATTCGTCAACGGTTGG+TGG 0.530310 5.3:-20489947 MS.gene069134:CDS
AGCAGCACCGGTACAAGTGG+AGG 0.530406 5.3:-20484874 MS.gene069134:CDS
TTTGGGTGATAGGGAAATGG+AGG 0.531899 5.3:-20489783 MS.gene069134:CDS
TGAAGTTTATGGGAAATTGT+TGG 0.532182 5.3:-20489684 MS.gene069134:CDS
AACCTTCCCTCCACTTGTAC+CGG 0.534868 5.3:+20484867 None:intergenic
AGATATTTCATGCAGATCAC+TGG 0.535144 5.3:-20486267 MS.gene069134:intron
TCGAGAATGTGGAACCTGGC+AGG 0.535373 5.3:-20485890 MS.gene069134:intron
CGTTTCAACGACGACGGTGG+TGG 0.539720 5.3:+20490031 None:intergenic
TTTGGTCTGTCATTCGTCAA+CGG 0.540079 5.3:-20489954 MS.gene069134:CDS
ATCAGTGGTTTCAACGGCGG+CGG 0.541422 5.3:+20490075 None:intergenic
CAGAATTGAGAGAAGTGAGT+GGG 0.546377 5.3:-20487453 MS.gene069134:CDS
TTTGGTAATTGGGTCGATGT+CGG 0.546404 5.3:-20489822 MS.gene069134:CDS
GGATAATCCTTTACCCAATG+AGG 0.546589 5.3:-20486193 MS.gene069134:CDS
AAACTGCACAAGCAAGCTGA+TGG 0.546668 5.3:-20484783 None:intergenic
CTATCAGACGAGTTAATAGT+TGG 0.551225 5.3:+20488050 None:intergenic
CCCAGCAGCACCGGTACAAG+TGG 0.551623 5.3:-20484877 MS.gene069134:CDS
GTGGGTTGATCGGAAGTTCA+GGG 0.553203 5.3:-20489928 MS.gene069134:CDS
GGTGCTATTGTTGGAAAAGG+AGG 0.558034 5.3:-20489644 MS.gene069134:CDS
GTGCTATTGTTGGAAAAGGA+GGG 0.558057 5.3:-20489643 MS.gene069134:CDS
CTTCAAGATTGTCCACCGAT+GGG 0.558317 5.3:-20488095 MS.gene069134:CDS
AGAATAGCAGCATCTTGTGC+AGG 0.558969 5.3:+20487616 None:intergenic
TTAGCAGCACAATGTGGAGC+AGG 0.560665 5.3:+20489569 None:intergenic
AACGTAGCTGGTAGTGTGAT+CGG 0.561462 5.3:-20487852 MS.gene069134:CDS
GGTGGTTGGGACTGACGATA+GGG 0.561685 5.3:-20489849 MS.gene069134:CDS
AAACGAAACGCGATCTGACC+CGG 0.565332 5.3:+20489974 None:intergenic
TTCAAAGATACTTTGCCCAT+CGG 0.567264 5.3:+20488080 None:intergenic
AAAGATACTTTGCCCATCGG+TGG 0.569779 5.3:+20488083 None:intergenic
CTTTGCTCTAACAACGTAGC+TGG 0.572622 5.3:-20487864 MS.gene069134:CDS
CTGGATTATACTGACCTGCC+AGG 0.574862 5.3:+20485876 None:intergenic
CACCGGTACAAGTGGAGGGA+AGG 0.577288 5.3:-20484869 MS.gene069134:CDS
GGGGCTTGAAAGTGAGAAAG+GGG 0.582131 5.3:-20489714 MS.gene069134:CDS
GTGGTGATCAGTGGTTTCAA+CGG 0.585651 5.3:+20490069 None:intergenic
TTAATCGAGAATGTGGAACC+TGG 0.593430 5.3:-20485894 MS.gene069134:CDS
TATTTCATGCAGATCACTGG+TGG 0.600462 5.3:-20486264 MS.gene069134:intron
CTCTGAGACTATAATCTCCA+CGG 0.600704 5.3:+20485601 None:intergenic
AATCCACTGCGAGGATGCGG+TGG 0.602490 5.3:-20489867 MS.gene069134:CDS
CAGCTACGTTGTTAGAGCAA+AGG 0.602643 5.3:+20487865 None:intergenic
CTTCATACTGACCTAAAGGA+GGG 0.604930 5.3:+20487769 None:intergenic
CAACGGCGGCGGAGAAAGTG+GGG 0.607389 5.3:+20490086 None:intergenic
GCAGCACCGGTACAAGTGGA+GGG 0.608583 5.3:-20484873 MS.gene069134:CDS
AAACAGACAACAAACGCTAA+CGG 0.610851 5.3:-20487939 MS.gene069134:CDS
GCTGATATTCAACTACTGCA+TGG 0.611060 5.3:-20487430 MS.gene069134:CDS
GAGGTTTCTAATGCACAAGA+AGG 0.618108 5.3:-20489764 MS.gene069134:CDS
TCAGACGAGTTAATAGTTGG+CGG 0.619467 5.3:+20488053 None:intergenic
TACAGGTGATTCCACAGCAG+TGG 0.621359 5.3:+20487543 None:intergenic
TTCATACTGACCTAAAGGAG+GGG 0.624269 5.3:+20487770 None:intergenic
TCTTCATACTGACCTAAAGG+AGG 0.626783 5.3:+20487768 None:intergenic
GTATTTGATCCCAGCAGCAC+CGG 0.627371 5.3:-20484886 MS.gene069134:CDS
CAACCACCGCATCCTCGCAG+TGG 0.627904 5.3:+20489864 None:intergenic
TTGTTCCGTTTCAACGACGA+CGG 0.631881 5.3:+20490025 None:intergenic
ATTTCAGCCAGCCACTGCTG+TGG 0.635973 5.3:-20487554 MS.gene069134:CDS
TTCCGTTTCAACGACGACGG+TGG 0.641928 5.3:+20490028 None:intergenic
GTGATCAGTGGTTTCAACGG+CGG 0.644192 5.3:+20490072 None:intergenic
GTCAACCTCTTACACACATG+AGG 0.644733 5.3:-20488027 MS.gene069134:CDS
TGTATATTTGCAGAATGCAG+GGG 0.651347 5.3:-20485964 MS.gene069134:intron
GGTAACCATGAATTAAGGTG+AGG 0.652162 5.3:+20487996 None:intergenic
CACGGTAGTGTTTGTCACAG+TGG 0.663033 5.3:+20485619 None:intergenic
TCTGTTTATGGTGAAGATGG+CGG 0.667726 5.3:-20485566 MS.gene069134:CDS
TCAGAATTGAGAGAAGTGAG+TGG 0.669570 5.3:-20487454 MS.gene069134:CDS
AGAATTGAGAGAAGTGAGTG+GGG 0.684487 5.3:-20487452 MS.gene069134:CDS
TCGTCTTTAGCAGCACAATG+TGG 0.685014 5.3:+20489563 None:intergenic
TAATGCTTCAGATAATGATG+TGG 0.688915 5.3:-20487395 MS.gene069134:CDS
GGGCTTGAAAGTGAGAAAGG+GGG 0.707750 5.3:-20489713 MS.gene069134:CDS
ACATTGTGCTGCTAAAGACG+AGG 0.713313 5.3:-20489561 MS.gene069134:CDS
CGGATGCAAAATCCACTGCG+AGG 0.717160 5.3:-20489876 MS.gene069134:CDS
CACTGTGACAAACACTACCG+TGG 0.720924 5.3:-20485618 MS.gene069134:CDS
TGGAATCACCTGTAACTGCG+AGG 0.722241 5.3:-20487534 MS.gene069134:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAGTATTATGTTATTATTAA+TGG - chr5.3:20486411-20486430 MS.gene069134:intron 10.0%
!!! ACTTTATTTTATTTTTTGTT+AGG + chr5.3:20487871-20487890 None:intergenic 10.0%
!! AATTAAGGTAGAAAAAAAAA+AGG - chr5.3:20489499-20489518 MS.gene069134:intron 15.0%
!! ACATATATTAAATGCTTTAA+AGG + chr5.3:20486120-20486139 None:intergenic 15.0%
!! AGATCAATAATAGAATATTA+TGG + chr5.3:20487201-20487220 None:intergenic 15.0%
!! ATAATACTAATACAAATGAA+AGG - chr5.3:20489725-20489744 MS.gene069134:CDS 15.0%
!! CAATAATAATAATGATACAA+AGG + chr5.3:20486332-20486351 None:intergenic 15.0%
!! GTTATTATTATGAGAAATTT+GGG - chr5.3:20486357-20486376 MS.gene069134:intron 15.0%
!! TAAAATCACTTCTATAATTA+GGG - chr5.3:20488666-20488685 MS.gene069134:intron 15.0%
!! TACATAAAATAATATATTGC+TGG - chr5.3:20489139-20489158 MS.gene069134:intron 15.0%
!! TCTTTATAAATATTTACTAG+TGG + chr5.3:20485534-20485553 None:intergenic 15.0%
!! TGTTATTATTATGAGAAATT+TGG - chr5.3:20486356-20486375 MS.gene069134:intron 15.0%
!! TTACTACTATTATTCTTATT+AGG - chr5.3:20485664-20485683 MS.gene069134:intron 15.0%
!!! AAATGTACATAAATTGTTTT+CGG + chr5.3:20487937-20487956 None:intergenic 15.0%
!!! ACTTTTAAGTATTTTATTGA+GGG + chr5.3:20488042-20488061 None:intergenic 15.0%
!!! AGTGATAATGATTTTAATTA+AGG - chr5.3:20489484-20489503 MS.gene069134:intron 15.0%
!!! ATATATTTTTTTCTCAATTG+TGG - chr5.3:20486179-20486198 MS.gene069134:CDS 15.0%
!!! CTCAATTTTTTATTTGTATA+AGG - chr5.3:20489885-20489904 MS.gene069134:CDS 15.0%
!!! GTTTATTTTCATAAACTTTT+CGG + chr5.3:20487915-20487934 None:intergenic 15.0%
!!! TACTTTTAAGTATTTTATTG+AGG + chr5.3:20488043-20488062 None:intergenic 15.0%
!!! TAGATTATATTTGTTGTATA+TGG - chr5.3:20489775-20489794 MS.gene069134:CDS 15.0%
!!! TATATGTATGATTTGTTATA+CGG - chr5.3:20486133-20486152 MS.gene069134:CDS 15.0%
!!! TCAAACTTTTGATTTTTTTT+AGG + chr5.3:20485957-20485976 None:intergenic 15.0%
!!! TTTATTTTCATAAACTTTTC+GGG + chr5.3:20487914-20487933 None:intergenic 15.0%
!!! TTTTAGGAAAAATAAAATCA+GGG + chr5.3:20485941-20485960 None:intergenic 15.0%
!!! TTTTATTTGTATAAGGATTA+TGG - chr5.3:20489892-20489911 MS.gene069134:CDS 15.0%
!!! TTTTTAGGAAAAATAAAATC+AGG + chr5.3:20485942-20485961 None:intergenic 15.0%
!! AAACGGTTTAAACATAAAAA+GGG + chr5.3:20489682-20489701 None:intergenic 20.0%
!! AAAGATGGTTAAAATAAAGA+AGG + chr5.3:20488836-20488855 None:intergenic 20.0%
!! AATTTAAAGGTCTTTAATAC+GGG - chr5.3:20487694-20487713 MS.gene069134:intron 20.0%
!! AGAAAAATCAATAAAATGTG+CGG + chr5.3:20486277-20486296 None:intergenic 20.0%
!! AGTAATATTAGGAATAATAG+TGG - chr5.3:20485269-20485288 MS.gene069134:intron 20.0%
!! ATAAAAAGGGTTAAAATGAA+AGG + chr5.3:20489669-20489688 None:intergenic 20.0%
!! CAATTTAAAGGTCTTTAATA+CGG - chr5.3:20487693-20487712 MS.gene069134:intron 20.0%
!! CTTTAAATAAAGATACTGTT+AGG - chr5.3:20488743-20488762 MS.gene069134:intron 20.0%
!! GGAAGAATATAAGTAATATT+AGG - chr5.3:20485258-20485277 MS.gene069134:intron 20.0%
!! GTAAAATCACTTCTATAATT+AGG - chr5.3:20488665-20488684 MS.gene069134:intron 20.0%
!! TAAAAATTTAATCGAGAATG+TGG - chr5.3:20488979-20488998 MS.gene069134:intron 20.0%
!! TAAACGGTTTAAACATAAAA+AGG + chr5.3:20489683-20489702 None:intergenic 20.0%
!! TAAACTTTCTTCTGATTATT+TGG - chr5.3:20489426-20489445 MS.gene069134:intron 20.0%
!! TATAAATATTTACTAGTGGT+CGG + chr5.3:20485530-20485549 None:intergenic 20.0%
!! TCAAAATACATTTGTAAAAG+TGG - chr5.3:20486022-20486041 MS.gene069134:intron 20.0%
!! TGTAATAGAATATCAAAAGA+TGG + chr5.3:20488851-20488870 None:intergenic 20.0%
!! TTTAGGAAAAATAAAATCAG+GGG + chr5.3:20485940-20485959 None:intergenic 20.0%
!!! AATTTTCAATCTTAACCAAA+AGG + chr5.3:20486213-20486232 None:intergenic 20.0%
!!! ATAATAGTGGTTCTAATATT+AGG - chr5.3:20485282-20485301 MS.gene069134:intron 20.0%
!!! ATCTGCATTTTTTTGTTAAA+CGG + chr5.3:20489699-20489718 None:intergenic 20.0%
!!! CTAACAGTATCTTTATTTAA+AGG + chr5.3:20488745-20488764 None:intergenic 20.0%
!!! TAATAGTGGTTCTAATATTA+GGG - chr5.3:20485283-20485302 MS.gene069134:intron 20.0%
!!! TATTTGTTGTATATGGATTA+TGG - chr5.3:20489782-20489801 MS.gene069134:CDS 20.0%
!!! TCTTTATTTAAAGGAAAACT+TGG + chr5.3:20488736-20488755 None:intergenic 20.0%
!!! TTCTCGATTAAATTTTTATG+TGG + chr5.3:20488977-20488996 None:intergenic 20.0%
! AAACAGTAAGAAAAGATTGT+TGG + chr5.3:20488570-20488589 None:intergenic 25.0%
! AACTTACACCAATATATTTC+AGG - chr5.3:20487760-20487779 MS.gene069134:CDS 25.0%
! AATCCTTATTATATCTGCTT+CGG - chr5.3:20488158-20488177 MS.gene069134:intron 25.0%
! AATTCATGTCATCTTTCTAA+GGG + chr5.3:20489379-20489398 None:intergenic 25.0%
! ACAGTTAAGTTAATTATGCT+TGG - chr5.3:20487719-20487738 MS.gene069134:intron 25.0%
! ACTATTATTCTTATTAGGCA+CGG - chr5.3:20485669-20485688 MS.gene069134:intron 25.0%
! ACTGTAACTCCAAAAAATTA+GGG - chr5.3:20489574-20489593 MS.gene069134:CDS 25.0%
! ATAAATATTTACTAGTGGTC+GGG + chr5.3:20485529-20485548 None:intergenic 25.0%
! ATAGACATTCAGTTAAATGA+CGG + chr5.3:20486609-20486628 None:intergenic 25.0%
! ATTTACATTCTTAACTAAGC+TGG + chr5.3:20488211-20488230 None:intergenic 25.0%
! CGTATTAAAGACCTTTAAAT+TGG + chr5.3:20487695-20487714 None:intergenic 25.0%
! CTGATATGAAATTCAATGAT+AGG - chr5.3:20485809-20485828 MS.gene069134:intron 25.0%
! CTTCTAGATCTAATAATTAC+AGG + chr5.3:20489090-20489109 None:intergenic 25.0%
! GAAAGTCTAAACTTTGATAA+TGG + chr5.3:20489637-20489656 None:intergenic 25.0%
! GAAATATATTGGTGTAAGTT+AGG + chr5.3:20487760-20487779 None:intergenic 25.0%
! GATAAATAAGAATGTCTAAG+TGG - chr5.3:20486546-20486565 MS.gene069134:intron 25.0%
! GCAGTTCTTGAAAATATATT+TGG + chr5.3:20486642-20486661 None:intergenic 25.0%
! GGTATGACATTGAAAAATAA+CGG + chr5.3:20485835-20485854 None:intergenic 25.0%
! GTGAATATTTATTATGCCAT+TGG + chr5.3:20489113-20489132 None:intergenic 25.0%
! TAATTCATGTCATCTTTCTA+AGG + chr5.3:20489380-20489399 None:intergenic 25.0%
! TACTGTAACTCCAAAAAATT+AGG - chr5.3:20489573-20489592 MS.gene069134:CDS 25.0%
! TGTATGTTATGTAAGTGAAT+TGG - chr5.3:20486494-20486513 MS.gene069134:intron 25.0%
! TTGAGAGCCTTAAAAAAAAA+AGG + chr5.3:20487557-20487576 None:intergenic 25.0%
! TTGCTCAATTTCCAATTTAA+AGG - chr5.3:20487681-20487700 MS.gene069134:intron 25.0%
! TTTGAATCATTTGATCATTG+TGG - chr5.3:20489454-20489473 MS.gene069134:intron 25.0%
!! AAGATTTTACCAAAAGAGAA+AGG + chr5.3:20489220-20489239 None:intergenic 25.0%
!! AAGTTATCCTTTTATCATGA+AGG + chr5.3:20487654-20487673 None:intergenic 25.0%
!! AATAAGTTGAAAACAACGTA+TGG - chr5.3:20488458-20488477 MS.gene069134:intron 25.0%
!! AGACATTCTTATTTATCACA+AGG + chr5.3:20486543-20486562 None:intergenic 25.0%
!! TAAGATTTTACTAAGGGAAA+GGG + chr5.3:20489063-20489082 None:intergenic 25.0%
!! TCTCTTTTGGTAAAATCTTT+TGG - chr5.3:20489221-20489240 MS.gene069134:intron 25.0%
!!! AACTTCAATTTTGAGATTGT+AGG - chr5.3:20486517-20486536 MS.gene069134:intron 25.0%
!!! AGGAATCTAAGATTTTACTA+AGG + chr5.3:20489070-20489089 None:intergenic 25.0%
!!! ATAGGGTTATTTTGGTAATT+GGG - chr5.3:20485048-20485067 MS.gene069134:intron 25.0%
!!! ATGAATTATTTAATTTGCCG+TGG - chr5.3:20489392-20489411 MS.gene069134:intron 25.0%
!!! ATGACGGATCAAATTTAATA+TGG + chr5.3:20486593-20486612 None:intergenic 25.0%
!!! ATGTTCGTGTACTTATTTTA+TGG - chr5.3:20488126-20488145 MS.gene069134:CDS 25.0%
!!! CTTGTTTTCTTCCTATATTT+TGG - chr5.3:20486450-20486469 MS.gene069134:intron 25.0%
!!! GCTAAAATTCCCTAATTTTT+TGG + chr5.3:20489586-20489605 None:intergenic 25.0%
!!! GGAATCTAAGATTTTACTAA+GGG + chr5.3:20489069-20489088 None:intergenic 25.0%
!!! TTCTTGTTCTTTTGTTTGAT+TGG - chr5.3:20486705-20486724 MS.gene069134:intron 25.0%
!!! TTTTTTCAACCTTTCTCTTT+TGG - chr5.3:20489208-20489227 MS.gene069134:intron 25.0%
AAACAGCACCTGAAATATAT+TGG + chr5.3:20487771-20487790 None:intergenic 30.0%
AAATAAGAATGTCTAAGTGG+AGG - chr5.3:20486549-20486568 MS.gene069134:intron 30.0%
AATCAAAAGTTTGAACCCTT+TGG - chr5.3:20485963-20485982 MS.gene069134:intron 30.0%
AATCTTGTACTAAAAACCCT+TGG + chr5.3:20488885-20488904 None:intergenic 30.0%
AATGGCCAATAAATTTCACT+TGG + chr5.3:20489619-20489638 None:intergenic 30.0%
AATTACTTGATTCAAGGTTC+TGG + chr5.3:20487242-20487261 None:intergenic 30.0%
ACAAGATACATAATTGTACC+TGG + chr5.3:20487515-20487534 None:intergenic 30.0%
AGCTATTGTATCCAACATAA+AGG - chr5.3:20488069-20488088 MS.gene069134:CDS 30.0%
ATAAGTACACGAACATTAGA+CGG + chr5.3:20488122-20488141 None:intergenic 30.0%
ATACCGAAGCAGATATAATA+AGG + chr5.3:20488164-20488183 None:intergenic 30.0%
ATAGATAAACCTTCCATTGA+AGG + chr5.3:20486908-20486927 None:intergenic 30.0%
ATCAAAAGTTTGAACCCTTT+GGG - chr5.3:20485964-20485983 MS.gene069134:intron 30.0%
ATTTCATAAGCTGTTTGCAT+AGG - chr5.3:20487953-20487972 MS.gene069134:CDS 30.0%
ATTTGTAAAAGTGGCTTGAT+CGG - chr5.3:20486031-20486050 MS.gene069134:intron 30.0%
CAATTTAGATCGAATTAGAC+AGG - chr5.3:20489337-20489356 MS.gene069134:intron 30.0%
CTTACAAAAATCCTTGAGAA+AGG - chr5.3:20486295-20486314 MS.gene069134:intron 30.0%
GACGGTTGTAAAATGTTTAT+TGG - chr5.3:20489830-20489849 MS.gene069134:CDS 30.0%
TAAAAAGGTCACAGAAAATG+TGG - chr5.3:20488949-20488968 MS.gene069134:intron 30.0%
TAATGCTTCAGATAATGATG+TGG - chr5.3:20487485-20487504 MS.gene069134:CDS 30.0%
TAATTCATGGTTACCTTCAA+TGG - chr5.3:20486892-20486911 MS.gene069134:intron 30.0%
TATAAAAAAGGTTTGCACGA+TGG - chr5.3:20485582-20485601 MS.gene069134:CDS 30.0%
TGAAGTTTATGGGAAATTGT+TGG - chr5.3:20485196-20485215 MS.gene069134:intron 30.0%
TGATGTTCATGCCAAAATAT+AGG + chr5.3:20486464-20486483 None:intergenic 30.0%
TTATTAGATCTAGAAGCCAA+TGG - chr5.3:20489094-20489113 MS.gene069134:intron 30.0%
TTGAAGGTAACCATGAATTA+AGG + chr5.3:20486892-20486911 None:intergenic 30.0%
TTGCACCAAGTGAAATTTAT+TGG - chr5.3:20489611-20489630 MS.gene069134:CDS 30.0%
TTGTATATTTGCAGAATGCA+GGG - chr5.3:20488915-20488934 MS.gene069134:intron 30.0%
! ACATCATTATCTGAAGCATT+AGG + chr5.3:20487486-20487505 None:intergenic 30.0%
! ATTGTGGAATTCTTTCCTTT+TGG - chr5.3:20486195-20486214 MS.gene069134:CDS 30.0%
! CATTTATTGACTGGTAATGA+AGG - chr5.3:20487393-20487412 MS.gene069134:CDS 30.0%
! CTAAGATTTTACTAAGGGAA+AGG + chr5.3:20489064-20489083 None:intergenic 30.0%
! TATTTTATTGAGGGTCTGTT+TGG + chr5.3:20488033-20488052 None:intergenic 30.0%
! TGTTGTTAGGGTTTTTGATA+GGG - chr5.3:20485139-20485158 MS.gene069134:intron 30.0%
! TTATCTGAAGCATTAGGAAT+TGG + chr5.3:20487480-20487499 None:intergenic 30.0%
! TTTGAAATCGATAGTATCAG+TGG + chr5.3:20486007-20486026 None:intergenic 30.0%
! TTTTTCCTCACCTTAATTCA+TGG - chr5.3:20486879-20486898 MS.gene069134:intron 30.0%
!! AATATATTTCAGGTGCTGTT+TGG - chr5.3:20487770-20487789 MS.gene069134:CDS 30.0%
!! ATTATTTAATTTGCCGTGGT+TGG - chr5.3:20489396-20489415 MS.gene069134:intron 30.0%
!! TTATTTAATTTGCCGTGGTT+GGG - chr5.3:20489397-20489416 MS.gene069134:intron 30.0%
!!! AGAACTTTTGAAATCCAAAC+TGG - chr5.3:20487070-20487089 MS.gene069134:intron 30.0%
!!! AGCTACGCCTTTTTTTTTTA+AGG - chr5.3:20487547-20487566 MS.gene069134:CDS 30.0%
!!! ATTACATCTCTTGTTTTCCA+AGG - chr5.3:20488865-20488884 MS.gene069134:intron 30.0%
!!! GATAGGGTTATTTTGGTAAT+TGG - chr5.3:20485047-20485066 MS.gene069134:intron 30.0%
!!! TTACATCTCTTGTTTTCCAA+GGG - chr5.3:20488866-20488885 MS.gene069134:intron 30.0%
AAACAGACAACAAACGCTAA+CGG - chr5.3:20486941-20486960 MS.gene069134:intron 35.0%
AAATCCTTGAGAAAGGAGAT+TGG - chr5.3:20486302-20486321 MS.gene069134:intron 35.0%
ACAAATGAGGACCTTTATGT+TGG + chr5.3:20488083-20488102 None:intergenic 35.0%
AGATATTTCATGCAGATCAC+TGG - chr5.3:20488613-20488632 MS.gene069134:intron 35.0%
AGCACGTTACATTTATTGAC+TGG - chr5.3:20487384-20487403 MS.gene069134:intron 35.0%
ATAACCAATCTCCTTTCTCA+AGG + chr5.3:20486309-20486328 None:intergenic 35.0%
ATTAGTTGTTCTCCTTTGTC+TGG - chr5.3:20485459-20485478 MS.gene069134:intron 35.0%
CAACTATTAACTCGTCTGAT+AGG - chr5.3:20486831-20486850 MS.gene069134:intron 35.0%
CAGGAGAATTACTTGATTCA+AGG + chr5.3:20487248-20487267 None:intergenic 35.0%
CATTTGATCATTGTGGTGTT+TGG - chr5.3:20489461-20489480 MS.gene069134:intron 35.0%
CTATCAGACGAGTTAATAGT+TGG + chr5.3:20486833-20486852 None:intergenic 35.0%
CTGACATCCTTCATGATAAA+AGG - chr5.3:20487644-20487663 MS.gene069134:intron 35.0%
CTTCCAGAAACTAACAAATG+AGG + chr5.3:20488096-20488115 None:intergenic 35.0%
CTTGTATATTTGCAGAATGC+AGG - chr5.3:20488914-20488933 MS.gene069134:intron 35.0%
GGGAGAAAAAATCACAGAAA+AGG + chr5.3:20489043-20489062 None:intergenic 35.0%
GTTGAAAAAAGATCAGAAGC+AGG + chr5.3:20489198-20489217 None:intergenic 35.0%
TACTTGACATGAATTCCACT+TGG + chr5.3:20486396-20486415 None:intergenic 35.0%
TCAGTTCAATGACAAGTGAA+TGG + chr5.3:20486675-20486694 None:intergenic 35.0%
TGTATATTTGCAGAATGCAG+GGG - chr5.3:20488916-20488935 MS.gene069134:intron 35.0%
TTCAAAGATACTTTGCCCAT+CGG + chr5.3:20486803-20486822 None:intergenic 35.0%
TTCTCAAATAGACTCACAAG+TGG - chr5.3:20487978-20487997 MS.gene069134:CDS 35.0%
TTGGCACATAGTTCTCAAAT+TGG - chr5.3:20485215-20485234 MS.gene069134:intron 35.0%
TTGTTTGATTGGCAGATAAC+TGG - chr5.3:20486716-20486735 MS.gene069134:intron 35.0%
TTTCAATGTCATACCACCTA+GGG - chr5.3:20485840-20485859 MS.gene069134:intron 35.0%
TTTGTAAAAGTGGCTTGATC+GGG - chr5.3:20486032-20486051 MS.gene069134:intron 35.0%
! ACATTTTACAACCGTCCTTA+AGG + chr5.3:20489826-20489845 None:intergenic 35.0%
! AGGGGTGTATCAAACTAAAA+AGG - chr5.3:20488934-20488953 MS.gene069134:intron 35.0%
! CATTAGTGCTTTTACTACTG+AGG - chr5.3:20488260-20488279 MS.gene069134:intron 35.0%
! CTATTTTACAATCGCATACG+TGG + chr5.3:20485782-20485801 None:intergenic 35.0%
! GATCGAAAAGGGATTGTTTT+GGG - chr5.3:20485080-20485099 MS.gene069134:intron 35.0%
! TAGGGTTTTTGATAGGGTTT+GGG - chr5.3:20485145-20485164 MS.gene069134:intron 35.0%
! TTAGGGTTTTTGATAGGGTT+TGG - chr5.3:20485144-20485163 MS.gene069134:intron 35.0%
! TTGGTAAAATCTTTTGGCAG+AGG - chr5.3:20489227-20489246 MS.gene069134:intron 35.0%
! TTTTCAATGTCATACCACCT+AGG - chr5.3:20485839-20485858 MS.gene069134:intron 35.0%
!! ATATGCTCTAGTGTTGTTTC+TGG - chr5.3:20489944-20489963 MS.gene069134:CDS 35.0%
!! ATTGGTGCTATTGTTGGAAA+AGG - chr5.3:20485233-20485252 MS.gene069134:intron 35.0%
!! CATGTCTTTGGTTCTGTTTA+TGG - chr5.3:20489302-20489321 MS.gene069134:intron 35.0%
!! GTGTTGTTAGGGTTTTTGAT+AGG - chr5.3:20485138-20485157 MS.gene069134:intron 35.0%
!! TATGCTCTAGTGTTGTTTCT+GGG - chr5.3:20489945-20489964 MS.gene069134:CDS 35.0%
!! TCTCAAATTGGTGCTATTGT+TGG - chr5.3:20485227-20485246 MS.gene069134:intron 35.0%
AAAAAAGGTTTGCACGATGG+AGG - chr5.3:20485585-20485604 MS.gene069134:CDS 40.0%
AACCTCGCAAAAGGAAAAGA+AGG + chr5.3:20488793-20488812 None:intergenic 40.0%
AAGAAGGTGAAGAATACCTG+TGG + chr5.3:20488820-20488839 None:intergenic 40.0%
AAGATCCTCATGTGTGTAAG+AGG + chr5.3:20486861-20486880 None:intergenic 40.0%
AATGTCTAAGTGGAGGTAAC+TGG - chr5.3:20486556-20486575 MS.gene069134:intron 40.0%
ACCCGGTAGAAGTTTGAAAA+CGG + chr5.3:20484892-20484911 None:intergenic 40.0%
AGAATTGAGAGAAGTGAGTG+GGG - chr5.3:20487428-20487447 MS.gene069134:CDS 40.0%
AGATAATGATGTGGTAGTCC+AGG - chr5.3:20487494-20487513 MS.gene069134:CDS 40.0%
ATAGTCTCAGAGCATGTCTT+TGG - chr5.3:20489290-20489309 MS.gene069134:intron 40.0%
ATTAAAAGCCTCGCAGTTAC+AGG + chr5.3:20487357-20487376 None:intergenic 40.0%
CAGAATTGAGAGAAGTGAGT+GGG - chr5.3:20487427-20487446 MS.gene069134:CDS 40.0%
CTTCATACTGACCTAAAGGA+GGG + chr5.3:20487114-20487133 None:intergenic 40.0%
GAAATCGATAGTATCAGTGG+CGG + chr5.3:20486004-20486023 None:intergenic 40.0%
GAGGTTTCTAATGCACAAGA+AGG - chr5.3:20485116-20485135 MS.gene069134:intron 40.0%
GCAGATAACTGGTGAAAGTT+TGG - chr5.3:20486727-20486746 MS.gene069134:intron 40.0%
GCTGAAGATCACATTCGAAA+TGG - chr5.3:20487303-20487322 MS.gene069134:intron 40.0%
GCTGATATTCAACTACTGCA+TGG - chr5.3:20487450-20487469 MS.gene069134:CDS 40.0%
GGATAAAGATTCATGCCAAG+TGG - chr5.3:20486378-20486397 MS.gene069134:intron 40.0%
GGATAATCCTTTACCCAATG+AGG - chr5.3:20488687-20488706 MS.gene069134:intron 40.0%
GGGGAAATGGTGAAGTTTAT+GGG - chr5.3:20485186-20485205 MS.gene069134:intron 40.0%
GGTAACCATGAATTAAGGTG+AGG + chr5.3:20486887-20486906 None:intergenic 40.0%
GGTTCTGTTTATGGTGAAGA+TGG - chr5.3:20489311-20489330 MS.gene069134:intron 40.0%
GTAGTGTGATCGGCAAAAAA+GGG - chr5.3:20487038-20487057 MS.gene069134:intron 40.0%
TAACATCTGCACCTGAAATC+TGG + chr5.3:20489972-20489991 None:intergenic 40.0%
TATTTCATGCAGATCACTGG+TGG - chr5.3:20488616-20488635 MS.gene069134:intron 40.0%
TCAGAATTGAGAGAAGTGAG+TGG - chr5.3:20487426-20487445 MS.gene069134:CDS 40.0%
TCAGACGAGTTAATAGTTGG+CGG + chr5.3:20486830-20486849 None:intergenic 40.0%
TCATGGTTACCTTCAATGGA+AGG - chr5.3:20486896-20486915 MS.gene069134:intron 40.0%
TCTGAAAACAACTGCTTGTC+CGG + chr5.3:20486993-20487012 None:intergenic 40.0%
TCTGTTTATGGTGAAGATGG+CGG - chr5.3:20489314-20489333 MS.gene069134:intron 40.0%
TCTTCATACTGACCTAAAGG+AGG + chr5.3:20487115-20487134 None:intergenic 40.0%
TGAGCTGCAAATGTTTGATC+AGG + chr5.3:20490054-20490073 None:intergenic 40.0%
TTAATCGAGAATGTGGAACC+TGG - chr5.3:20488986-20489005 MS.gene069134:intron 40.0%
TTAGGCACGGTAAATGCAAT+TGG - chr5.3:20485682-20485701 MS.gene069134:intron 40.0%
TTCAATGTCATACCACCTAG+GGG - chr5.3:20485841-20485860 MS.gene069134:intron 40.0%
TTCATACTGACCTAAAGGAG+GGG + chr5.3:20487113-20487132 None:intergenic 40.0%
TTTGGTCTGTCATTCGTCAA+CGG - chr5.3:20484926-20484945 MS.gene069134:intron 40.0%
! AACCTTCTTTTCCTTTTGCG+AGG - chr5.3:20488788-20488807 MS.gene069134:intron 40.0%
! ACCCGTTTTCAAACTTCTAC+CGG - chr5.3:20484887-20484906 MS.gene069134:CDS 40.0%
! AGGGTTTTTGATAGGGTTTG+GGG - chr5.3:20485146-20485165 MS.gene069134:intron 40.0%
! ATTGACTGGTAATGAAGGTC+AGG - chr5.3:20487398-20487417 MS.gene069134:CDS 40.0%
! GACTGACGATAGGGTTATTT+TGG - chr5.3:20485040-20485059 MS.gene069134:intron 40.0%
! GCAGAATTGGGGATTTTCAT+TGG - chr5.3:20486054-20486073 MS.gene069134:intron 40.0%
! GGATCGAAAAGGGATTGTTT+TGG - chr5.3:20485079-20485098 MS.gene069134:intron 40.0%
! GGTCCTCATTTGTTAGTTTC+TGG - chr5.3:20488090-20488109 MS.gene069134:CDS 40.0%
! GTGCTATTGTTGGAAAAGGA+GGG - chr5.3:20485237-20485256 MS.gene069134:intron 40.0%
! TTACTACTGAGGCATTCATG+TGG - chr5.3:20488271-20488290 MS.gene069134:intron 40.0%
! TTTAAGTTCAACCCCCTCAA+CGG + chr5.3:20485878-20485897 None:intergenic 40.0%
! TTTGGTAATTGGGTCGATGT+CGG - chr5.3:20485058-20485077 MS.gene069134:intron 40.0%
!! AACTCTAGCCTTGACTCAAA+AGG - chr5.3:20486965-20486984 MS.gene069134:intron 40.0%
!! ACTTGATTCAAGGTTCTGGA+AGG + chr5.3:20487238-20487257 None:intergenic 40.0%
!! AGACAATAGAAGCACCAGTT+TGG + chr5.3:20487087-20487106 None:intergenic 40.0%
!! ATGCACAAGAAGGTGTTGTT+AGG - chr5.3:20485126-20485145 MS.gene069134:intron 40.0%
!! CTCTGAGACTATAATCTCCA+CGG + chr5.3:20489282-20489301 None:intergenic 40.0%
!! GTTTGAAAACGGGTCGTTTT+CGG + chr5.3:20484881-20484900 None:intergenic 40.0%
!! TGCACAAGAAGGTGTTGTTA+GGG - chr5.3:20485127-20485146 MS.gene069134:intron 40.0%
!! TGTTTTGGGTGATAGGGAAA+TGG - chr5.3:20485094-20485113 MS.gene069134:intron 40.0%
!!! AAGGGATTGTTTTGGGTGAT+AGG - chr5.3:20485087-20485106 MS.gene069134:intron 40.0%
!!! AGGGATTGTTTTGGGTGATA+GGG - chr5.3:20485088-20485107 MS.gene069134:intron 40.0%
!!! CGTCACTATTTCTGCTTTTG+AGG - chr5.3:20487141-20487160 MS.gene069134:intron 40.0%
AAAGATACTTTGCCCATCGG+TGG + chr5.3:20486800-20486819 None:intergenic 45.0%
AAGTTTGAACCCTTTGGGCT+AGG - chr5.3:20485969-20485988 MS.gene069134:intron 45.0%
AGAATAGCAGCATCTTGTGC+AGG + chr5.3:20487267-20487286 None:intergenic 45.0%
AGCCTTGACTCAAAAGGTTC+CGG - chr5.3:20486971-20486990 MS.gene069134:intron 45.0%
AGTTTAACACAGCCCAACCA+CGG + chr5.3:20489412-20489431 None:intergenic 45.0%
AGTTTGAACCCTTTGGGCTA+GGG - chr5.3:20485970-20485989 MS.gene069134:intron 45.0%
ATTGTCTTTGCCCCTCCTTT+AGG - chr5.3:20487100-20487119 MS.gene069134:intron 45.0%
CAGCTACGTTGTTAGAGCAA+AGG + chr5.3:20487018-20487037 None:intergenic 45.0%
CAGGTCAGTATAATCCAGCT+GGG - chr5.3:20489009-20489028 MS.gene069134:intron 45.0%
CCCGGTAGAAGTTTGAAAAC+GGG + chr5.3:20484891-20484910 None:intergenic 45.0%
CGCTCTTCATACTGACCTAA+AGG + chr5.3:20487118-20487137 None:intergenic 45.0%
CTCCTTTGTCTGGATTGAAC+CGG - chr5.3:20485469-20485488 MS.gene069134:intron 45.0%
CTTCAAGATTGTCCACCGAT+GGG - chr5.3:20486785-20486804 MS.gene069134:intron 45.0%
CTTTGCTCTAACAACGTAGC+TGG - chr5.3:20487016-20487035 MS.gene069134:intron 45.0%
GAAAGTGAGAAAGGGGGAAA+TGG - chr5.3:20485173-20485192 MS.gene069134:intron 45.0%
GGGGGAAATGGTGAAGTTTA+TGG - chr5.3:20485185-20485204 MS.gene069134:intron 45.0%
GGTAGTGTGATCGGCAAAAA+AGG - chr5.3:20487037-20487056 MS.gene069134:intron 45.0%
GTCAACCTCTTACACACATG+AGG - chr5.3:20486853-20486872 MS.gene069134:intron 45.0%
GTGGTGATCAGTGGTTTCAA+CGG + chr5.3:20484814-20484833 None:intergenic 45.0%
TCGTCTTTAGCAGCACAATG+TGG + chr5.3:20485320-20485339 None:intergenic 45.0%
TCTTCAAGATTGTCCACCGA+TGG - chr5.3:20486784-20486803 MS.gene069134:intron 45.0%
TGTGGTAGAAACCTCGCAAA+AGG + chr5.3:20488802-20488821 None:intergenic 45.0%
TTAAGTTCAACCCCCTCAAC+GGG + chr5.3:20485877-20485896 None:intergenic 45.0%
TTGTTCCGTTTCAACGACGA+CGG + chr5.3:20484858-20484877 None:intergenic 45.0%
TTTGGGTGATAGGGAAATGG+AGG - chr5.3:20485097-20485116 MS.gene069134:intron 45.0%
! AACGTAGCTGGTAGTGTGAT+CGG - chr5.3:20487028-20487047 MS.gene069134:intron 45.0%
! ACATTGTGCTGCTAAAGACG+AGG - chr5.3:20485319-20485338 MS.gene069134:intron 45.0%
! ATGGATTATGGTGTCCACGA+GGG - chr5.3:20489794-20489813 MS.gene069134:CDS 45.0%
! CCCGTTTTCAAACTTCTACC+GGG - chr5.3:20484888-20484907 MS.gene069134:CDS 45.0%
! GGGTTTTTGATAGGGTTTGG+GGG - chr5.3:20485147-20485166 MS.gene069134:intron 45.0%
! TATGGATTATGGTGTCCACG+AGG - chr5.3:20489793-20489812 MS.gene069134:CDS 45.0%
! TTTTGCGAGGTTTCTACCAC+AGG - chr5.3:20488801-20488820 MS.gene069134:intron 45.0%
!! AGCTCAGTTGGTTTGAGCTA+AGG + chr5.3:20485505-20485524 None:intergenic 45.0%
!! GGTGCTATTGTTGGAAAAGG+AGG - chr5.3:20485236-20485255 MS.gene069134:intron 45.0%
!! TGTTTCTGGGACCAGATTTC+AGG - chr5.3:20489958-20489977 MS.gene069134:CDS 45.0%
!! TATTATTACTATTAATTAAT+AGG - chr5.3:20485371-20485390 MS.gene069134:intron 5.0%
!! TTAAAAATTATGTATAAAAA+AGG - chr5.3:20485570-20485589 MS.gene069134:CDS 5.0%
!!! ATATTTATAAAGATATTTTA+TGG - chr5.3:20485541-20485560 MS.gene069134:intron 5.0%
!!! TTTTTTATACATAATTTTTA+AGG + chr5.3:20485571-20485590 None:intergenic 5.0%
AAACGAAACGCGATCTGACC+CGG + chr5.3:20484909-20484928 None:intergenic 50.0%
AACCTTCCCTCCACTTGTAC+CGG + chr5.3:20490016-20490035 None:intergenic 50.0%
AATGTCATACCACCTAGGGG+AGG - chr5.3:20485844-20485863 MS.gene069134:intron 50.0%
AGTGGCTGAGTTTCTTGTCG+GGG - chr5.3:20488542-20488561 MS.gene069134:intron 50.0%
ATCCAAGACCCTAGCCCAAA+GGG + chr5.3:20485981-20486000 None:intergenic 50.0%
CAAAATCCACTGCGAGGATG+CGG - chr5.3:20485010-20485029 MS.gene069134:intron 50.0%
CACGGTAGTGTTTGTCACAG+TGG + chr5.3:20489264-20489283 None:intergenic 50.0%
CACTGTGACAAACACTACCG+TGG - chr5.3:20489262-20489281 MS.gene069134:intron 50.0%
CAGTGGCTGAGTTTCTTGTC+GGG - chr5.3:20488541-20488560 MS.gene069134:intron 50.0%
CCAGTGGCTGAGTTTCTTGT+CGG - chr5.3:20488540-20488559 MS.gene069134:intron 50.0%
CTGGATTATACTGACCTGCC+AGG + chr5.3:20489007-20489026 None:intergenic 50.0%
GAGGGCAATCTCCTTAAGGA+CGG - chr5.3:20489812-20489831 MS.gene069134:CDS 50.0%
GCAAGCACCTCATTGGGTAA+AGG + chr5.3:20488697-20488716 None:intergenic 50.0%
GCAGGTCAGTATAATCCAGC+TGG - chr5.3:20489008-20489027 MS.gene069134:intron 50.0%
GCTTCAGCAAGCACCTCATT+GGG + chr5.3:20488703-20488722 None:intergenic 50.0%
GGAGGGAAGGTTGTGATATC+TGG - chr5.3:20490024-20490043 MS.gene069134:CDS 50.0%
GGGCTTGAAAGTGAGAAAGG+GGG - chr5.3:20485167-20485186 MS.gene069134:intron 50.0%
GGGGCTTGAAAGTGAGAAAG+GGG - chr5.3:20485166-20485185 MS.gene069134:intron 50.0%
GGGGGCTTGAAAGTGAGAAA+GGG - chr5.3:20485165-20485184 MS.gene069134:intron 50.0%
GGTCAATCGTTTCTCAGCTC+CGG - chr5.3:20484973-20484992 MS.gene069134:intron 50.0%
GGTCGATGTCGGATCGAAAA+GGG - chr5.3:20485069-20485088 MS.gene069134:intron 50.0%
GGTTTGAGCTAAGGAGTTCG+AGG + chr5.3:20485496-20485515 None:intergenic 50.0%
GTATTTGATCCCAGCAGCAC+CGG - chr5.3:20489994-20490013 MS.gene069134:CDS 50.0%
GTCATTCGTCAACGGTTGGT+GGG - chr5.3:20484934-20484953 MS.gene069134:intron 50.0%
GTCCGGTTCAATCCAGACAA+AGG + chr5.3:20485474-20485493 None:intergenic 50.0%
GTCTGTCATTCGTCAACGGT+TGG - chr5.3:20484930-20484949 MS.gene069134:intron 50.0%
GTGATCAGTGGTTTCAACGG+CGG + chr5.3:20484811-20484830 None:intergenic 50.0%
TAAGTTCAACCCCCTCAACG+GGG + chr5.3:20485876-20485895 None:intergenic 50.0%
TACAGGTGATTCCACAGCAG+TGG + chr5.3:20487340-20487359 None:intergenic 50.0%
TGCTTCAGCAAGCACCTCAT+TGG + chr5.3:20488704-20488723 None:intergenic 50.0%
TGGAATCACCTGTAACTGCG+AGG - chr5.3:20487346-20487365 MS.gene069134:intron 50.0%
TGGCTTGATCGGGCAGAATT+GGG - chr5.3:20486042-20486061 MS.gene069134:intron 50.0%
TGGGGGCTTGAAAGTGAGAA+AGG - chr5.3:20485164-20485183 MS.gene069134:intron 50.0%
TGTCATTCGTCAACGGTTGG+TGG - chr5.3:20484933-20484952 MS.gene069134:intron 50.0%
TTAGCAGCACAATGTGGAGC+AGG + chr5.3:20485314-20485333 None:intergenic 50.0%
! TTTTGCATCCGGTTTCTCGC+CGG + chr5.3:20484995-20485014 None:intergenic 50.0%
!! CTCGCAGTGGATTTTGCATC+CGG + chr5.3:20485006-20485025 None:intergenic 50.0%
!! GAGCGCTTCTGAGATTGTCT+AGG + chr5.3:20488517-20488536 None:intergenic 50.0%
!! GTCCGGAACCTTTTGAGTCA+AGG + chr5.3:20486976-20486995 None:intergenic 50.0%
!! GTGGGTTGATCGGAAGTTCA+GGG - chr5.3:20484952-20484971 MS.gene069134:intron 50.0%
!! TCAACGGTTGGTGGGTTGAT+CGG - chr5.3:20484942-20484961 MS.gene069134:intron 50.0%
ATCAGTGGTTTCAACGGCGG+CGG + chr5.3:20484808-20484827 None:intergenic 55.0%
ATTTCAGCCAGCCACTGCTG+TGG - chr5.3:20487326-20487345 MS.gene069134:intron 55.0%
CACCACCGTCGTCGTTGAAA+CGG - chr5.3:20484850-20484869 MS.gene069134:CDS 55.0%
CCACGAGGGCAATCTCCTTA+AGG - chr5.3:20489808-20489827 MS.gene069134:CDS 55.0%
CCGACAAGAAACTCAGCCAC+TGG + chr5.3:20488543-20488562 None:intergenic 55.0%
CCTTAAGGAGATTGCCCTCG+TGG + chr5.3:20489811-20489830 None:intergenic 55.0%
CGGATGCAAAATCCACTGCG+AGG - chr5.3:20485004-20485023 MS.gene069134:intron 55.0%
GAGCTAAGGAGTTCGAGGTC+CGG + chr5.3:20485491-20485510 None:intergenic 55.0%
GATCCAAGACCCTAGCCCAA+AGG + chr5.3:20485982-20486001 None:intergenic 55.0%
GGCTTGATCGGGCAGAATTG+GGG - chr5.3:20486043-20486062 MS.gene069134:intron 55.0%
GGGTCAGATCGCGTTTCGTT+TGG - chr5.3:20484908-20484927 MS.gene069134:CDS 55.0%
GGGTCGATGTCGGATCGAAA+AGG - chr5.3:20485068-20485087 MS.gene069134:intron 55.0%
GGTGGTTGGGACTGACGATA+GGG - chr5.3:20485031-20485050 MS.gene069134:intron 55.0%
GTGGCTTGATCGGGCAGAAT+TGG - chr5.3:20486041-20486060 MS.gene069134:intron 55.0%
TAGTGGTCGGGTAGCTCAGT+TGG + chr5.3:20485517-20485536 None:intergenic 55.0%
TCGAGAATGTGGAACCTGGC+AGG - chr5.3:20488990-20489009 MS.gene069134:intron 55.0%
TTCCGTTTCAACGACGACGG+TGG + chr5.3:20484855-20484874 None:intergenic 55.0%
! AAAAGGCGCATACTCCCAGC+TGG + chr5.3:20489026-20489045 None:intergenic 55.0%
! AACCCTTTGGGCTAGGGTCT+TGG - chr5.3:20485976-20485995 MS.gene069134:intron 55.0%
! TTGTGGGTGGTGGTGATCAG+TGG + chr5.3:20484823-20484842 None:intergenic 55.0%
!! GGTGGGTTGATCGGAAGTTC+AGG - chr5.3:20484951-20484970 MS.gene069134:intron 55.0%
AATCCACTGCGAGGATGCGG+TGG - chr5.3:20485013-20485032 MS.gene069134:intron 60.0%
ACTGCGAGGATGCGGTGGTT+GGG - chr5.3:20485018-20485037 MS.gene069134:intron 60.0%
CACCGGTACAAGTGGAGGGA+AGG - chr5.3:20490011-20490030 MS.gene069134:CDS 60.0%
CGGTGGTTGGGACTGACGAT+AGG - chr5.3:20485030-20485049 MS.gene069134:intron 60.0%
CGTTTCAACGACGACGGTGG+TGG + chr5.3:20484852-20484871 None:intergenic 60.0%
GGTGATTCCACAGCAGTGGC+TGG + chr5.3:20487336-20487355 None:intergenic 60.0%
GTCATACCACCTAGGGGAGG+AGG - chr5.3:20485847-20485866 MS.gene069134:intron 60.0%
TCAACGGCGGCGGAGAAAGT+GGG + chr5.3:20484798-20484817 None:intergenic 60.0%
TCTCAGCTCCGGCGAGAAAC+CGG - chr5.3:20484984-20485003 MS.gene069134:intron 60.0%
TTCAACGGCGGCGGAGAAAG+TGG + chr5.3:20484799-20484818 None:intergenic 60.0%
! TTCAACGACGACGGTGGTGG+TGG + chr5.3:20484849-20484868 None:intergenic 60.0%
!! ACGGTGGTGGTGGTGGTTGT+GGG + chr5.3:20484839-20484858 None:intergenic 60.0%
!! AGCAGCACCGGTACAAGTGG+AGG - chr5.3:20490006-20490025 MS.gene069134:CDS 60.0%
!! CCACTTGTACCGGTGCTGCT+GGG + chr5.3:20490006-20490025 None:intergenic 60.0%
!! CTCAGAAGCGCTCATGCCAG+TGG - chr5.3:20488524-20488543 MS.gene069134:intron 60.0%
!! GCAGCACCGGTACAAGTGGA+GGG - chr5.3:20490007-20490026 MS.gene069134:CDS 60.0%
!! TCCACTTGTACCGGTGCTGC+TGG + chr5.3:20490007-20490026 None:intergenic 60.0%
CAACCACCGCATCCTCGCAG+TGG + chr5.3:20485019-20485038 None:intergenic 65.0%
CAACGGCGGCGGAGAAAGTG+GGG + chr5.3:20484797-20484816 None:intergenic 65.0%
CACTGCGAGGATGCGGTGGT+TGG - chr5.3:20485017-20485036 MS.gene069134:intron 65.0%
!! AACGACGACGGTGGTGGTGG+TGG + chr5.3:20484846-20484865 None:intergenic 65.0%
!! CCCAGCAGCACCGGTACAAG+TGG - chr5.3:20490003-20490022 MS.gene069134:CDS 65.0%
!! GACGGTGGTGGTGGTGGTTG+TGG + chr5.3:20484840-20484859 None:intergenic 65.0%
!! GTGGTGGTGGTGGTTGTGGG+TGG + chr5.3:20484836-20484855 None:intergenic 65.0%
!! GTGGTGGTGGTTGTGGGTGG+TGG + chr5.3:20484833-20484852 None:intergenic 65.0%
AGGAGGCAGCCCCGTTGAGG+GGG - chr5.3:20485864-20485883 MS.gene069134:intron 70.0%
GAGGAGGCAGCCCCGTTGAG+GGG - chr5.3:20485863-20485882 MS.gene069134:intron 70.0%
GGAGGAGGCAGCCCCGTTGA+GGG - chr5.3:20485862-20485881 MS.gene069134:intron 70.0%
ACGGGGCTGCCTCCTCCCCT+AGG + chr5.3:20485859-20485878 None:intergenic 75.0%
GGGAGGAGGCAGCCCCGTTG+AGG - chr5.3:20485861-20485880 MS.gene069134:intron 75.0%
GGGCTGCCTCCTCCCCTAGG+TGG + chr5.3:20485856-20485875 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr5.3 gene 20484786 20490116 20484786 ID=MS.gene069134
chr5.3 mRNA 20484786 20490116 20484786 ID=MS.gene069134.t1;Parent=MS.gene069134
chr5.3 exon 20489550 20490116 20489550 ID=MS.gene069134.t1.exon1;Parent=MS.gene069134.t1
chr5.3 CDS 20489550 20490116 20489550 ID=cds.MS.gene069134.t1;Parent=MS.gene069134.t1
chr5.3 exon 20487740 20488171 20487740 ID=MS.gene069134.t1.exon2;Parent=MS.gene069134.t1
chr5.3 CDS 20487740 20488171 20487740 ID=cds.MS.gene069134.t1;Parent=MS.gene069134.t1
chr5.3 exon 20487387 20487659 20487387 ID=MS.gene069134.t1.exon3;Parent=MS.gene069134.t1
chr5.3 CDS 20487387 20487659 20487387 ID=cds.MS.gene069134.t1;Parent=MS.gene069134.t1
chr5.3 exon 20486080 20486274 20486080 ID=MS.gene069134.t1.exon4;Parent=MS.gene069134.t1
chr5.3 CDS 20486080 20486274 20486080 ID=cds.MS.gene069134.t1;Parent=MS.gene069134.t1
chr5.3 exon 20485891 20485973 20485891 ID=MS.gene069134.t1.exon5;Parent=MS.gene069134.t1
chr5.3 CDS 20485891 20485973 20485891 ID=cds.MS.gene069134.t1;Parent=MS.gene069134.t1
chr5.3 exon 20485544 20485655 20485544 ID=MS.gene069134.t1.exon6;Parent=MS.gene069134.t1
chr5.3 CDS 20485544 20485655 20485544 ID=cds.MS.gene069134.t1;Parent=MS.gene069134.t1
chr5.3 exon 20484786 20484929 20484786 ID=MS.gene069134.t1.exon7;Parent=MS.gene069134.t1
chr5.3 CDS 20484786 20484929 20484786 ID=cds.MS.gene069134.t1;Parent=MS.gene069134.t1
Gene Sequence

>MS.gene069134

ATGCAAGACCCCACTTTCTCCGCCGCCGTTGAAACCACTGATCACCACCACCCACAACCACCACCACCACCGTCGTCGTTGAAACGGAACAACCGAAAACGACCCGTTTTCAAACTTCTACCGGGTCAGATCGCGTTTCGTTTGGTCTGTCATTCGTCAACGGTTGGTGGGTTGATCGGAAGTTCAGGGTCAATCGTTTCTCAGCTCCGGCGAGAAACCGGATGCAAAATCCACTGCGAGGATGCGGTGGTTGGGACTGACGATAGGGTTATTTTGGTAATTGGGTCGATGTCGGATCGAAAAGGGATTGTTTTGGGTGATAGGGAAATGGAGGTTTCTAATGCACAAGAAGGTGTTGTTAGGGTTTTTGATAGGGTTTGGGGGCTTGAAAGTGAGAAAGGGGGAAATGGTGAAGTTTATGGGAAATTGTTGGCACATAGTTCTCAAATTGGTGCTATTGTTGGAAAAGGAGGGAAGAATATAAGTAATATTAGGAATAATAGTGGTTCTAATATTAGGGTTTGTCCTGCTCCACATTGTGCTGCTAAAGACGAGGAGTTAATTCTTGTGAGTTTTGCTTTTGTCTATTATTACTATTAATTAATAGGATTTAATTTGTATTTAAAACTTTTTTACACGAACATTTAACTAAATATTAATAATTAGTTGTTAAATTAGTTGTTCTCCTTTGTCTGGATTGAACCGGACCTCGAACTCCTTAGCTCAAACCAACTGAGCTACCCGACCACTAGTAAATATTTATAAAGATATTTTATGGATAGCCTTAAAAATTATGTATAAAAAAGGTTTGCACGATGGAGGATCTAAATTAATCACTAATGACTTTGTTAAAAAAAGTTAATTACTAATTAATATTGTTACTACTATTATTCTTATTAGGCACGGTAAATGCAATTGGATTTGACTCTAAGTTGAGCTCTTTGAATTAAGATAACTCAATCATTAATTAATGTTTTAATATAGAGTTTAAATCCACGTATGCGATTGTAAAATAGTTTTACACTGATATGAAATTCAATGATAGGCCGTTATTTTTCAATGTCATACCACCTAGGGGAGGAGGCAGCCCCGTTGAGGGGGTTGAACTTAAAAAAATGCAAATATACATCTATATATTTTGCATTCTGAAGCCCCTGATTTTATTTTTCCTAAAAAAAATCAAAAGTTTGAACCCTTTGGGCTAGGGTCTTGGATCCGCCACTGATACTATCGATTTCAAAATACATTTGTAAAAGTGGCTTGATCGGGCAGAATTGGGGATTTTCATTGGAAATTAATGTAAAAATGTTCTATATATTGACAATGCATATCCTTTAAAGCATTTAATATATGTATGATTTGTTATACGGAGAATGTAATAATAGTAATTTTTATATATTTTTTTCTCAATTGTGGAATTCTTTCCTTTTGGTTAAGATTGAAAATTAAAAATGTAGTATTCAATAAAACAACAAAGTTTATTGAATGCCGCACATTTTATTGATTTTTCTTACAAAAATCCTTGAGAAAGGAGATTGGTTATCCTTTGTATCATTATTATTATTGTTGTTGTTATTATTATGAGAAATTTGGGATAAAGATTCATGCCAAGTGGAATTCATGTCAAGTATTATGTTATTATTAATGGTCAGTGAAATCTTGATCTTGTTTTCTTCCTATATTTTGGCATGAACATCATATTACTATGTGTATGTTATGTAAGTGAATTGGAACTTCAATTTTGAGATTGTAGGCCTTGTGATAAATAAGAATGTCTAAGTGGAGGTAACTGGCAAGTAGTCGACCATATTAAATTTGATCCGTCATTTAACTGAATGTCTATAATGATTTAACCAAATATATTTTCAAGAACTGCGAAAATAACACCATTCACTTGTCATTGAACTGATTATTTAATATTCTTGTTCTTTTGTTTGATTGGCAGATAACTGGTGAAAGTTTGGCTGTAAAGAAAGCACTGATTTATGTATCTTATTGTCTTCAAGATTGTCCACCGATGGGCAAAGTATCTTTGAACACGCCGCCAACTATTAACTCGTCTGATAGGTCAACCTCTTACACACATGAGGATCTTTTTCCTCACCTTAATTCATGGTTACCTTCAATGGAAGGTTTATCTATAAACGATGCTTCAAAACAGACAACAAACGCTAACGGAAACTCTAGCCTTGACTCAAAAGGTTCCGGACAAGCAGTTGTTTTCAGACTCCTTTGCTCTAACAACGTAGCTGGTAGTGTGATCGGCAAAAAAGGGTCTATAGTCAGAACTTTTGAAATCCAAACTGGTGCTTCTATTGTCTTTGCCCCTCCTTTAGGTCAGTATGAAGAGCGCATCGTCACTATTTCTGCTTTTGAGGTTAGTCACGTGATTTTGATACTCATTTTGATTTGCCATAATATTCTATTATTGATCTAGATTTTTTTTTTTCCTTCCAGAACCTTGAATCAAGTAATTCTCCTGCACAAGATGCTGCTATTCTTGTCTTCACTAGAATTGCTGAAGATCACATTCGAAATGGATTTCAGCCAGCCACTGCTGTGGAATCACCTGTAACTGCGAGGCTTTTAATCACAACAAGCACGTTACATTTATTGACTGGTAATGAAGGTCAGGTGATTTCAGAATTGAGAGAAGTGAGTGGGGCTGATATTCAACTACTGCATGGAGAGCCAATTCCTAATGCTTCAGATAATGATGTGGTAGTCCAGGTACAATTATGTATCTTGTATAATTTAAGACAGCTACGCCTTTTTTTTTTAAGGCTCTCAAGAGTTTATATTTGTTACTTTACGCTGAGCTTCTGTAATTGTTTAGATCTTGATTTTATTATCATATGCTGACATCCTTCATGATAAAAGGATAACTTTTGTTTGTTGCTCAATTTCCAATTTAAAGGTCTTTAATACGGGAAACAGTTAAGTTAATTATGCTTGGCTAGTAGAAGTGCTACCTAACTTACACCAATATATTTCAGGTGCTGTTTGGATAAACAGTTAAATCAAGTGTTTACAGATAAAACAGTTCATTTATTGACTTGTGAATTTGTTTTCAGCTTATTTGCCTAACAAAAAATAAAATAAAGTCAAGCTTTTATATAAGCTATCCCGAAAAGTTTATGAAAATAAACCGAAAACAATTTATGTACATTTCATAAGCTGTTTGCATAGGCTTTCTCAAATAGACTCACAAGTGGTTATGTCACTACTCACTAGATAAGTCAATCCAAACAGACCCTCAATAAAATACTTAAAAGTAGAAAAAAGCTATTGTATCCAACATAAAGGTCCTCATTTGTTAGTTTCTGGAAGCTTCCGTCTAATGTTCGTGTACTTATTTTATGGTGTCTTTTCAATCCTTATTATATCTGCTTCGGTATTGCTGTAGAATTCTTCTTTTGCTGCCAGCTTAGTTAAGAATGTAAATGATAACAAATATCTTATTTTGTTGCACTGCATTAGTGCTTTTACTACTGAGGCATTCATGTGGTCAGAATAGATTGATAACTTGTTTTGATAAACAACTTAATAAGCATTTATATCATAAGTACTTATGTGTGAGTTATATTTATAACAAGATAAATAAAATAAAATCAAAATGTTTTCATATAAACTTTAAGCTGTTTTCATAAGTTATCTTGAAGAGCTTATGAAAATAAGTTGAAAACAACGTATGGACATGTCATAAGCTGTTTTCATAAGCTCTCTCTCCTAGACAATCTCAGAAGCGCTCATGCCAGTGGCTGAGTTTCTTGTCGGGGTTCCAACAATCTTTTCTTACTGTTTGCTAGTCATGTTTATACATAGAGAGATATTTCATGCAGATCACTGGTGGATACAGATGCGTAGAAAATGCTCTACGTAAAATCACTTCTATAATTAGGGATAATCCTTTACCCAATGAGGTGCTTGCTGAAGCAAGAGTCAAACCAAGTTTTCCTTTAAATAAAGATACTGTTAGGAGTAAGTTCATTACCCGCAAAAAACCTTCTTTTCCTTTTGCGAGGTTTCTACCACAGGTATTCTTCACCTTCTTTATTTTAACCATCTTTTGATATTCTATTACATCTCTTGTTTTCCAAGGGTTTTTAGTACAAGATTGTTAAGAATCTTGTATATTTGCAGAATGCAGGGGTGTATCAAACTAAAAAGGTCACAGAAAATGTGGAACCACATAAAAATTTAATCGAGAATGTGGAACCTGGCAGGTCAGTATAATCCAGCTGGGAGTATGCGCCTTTTCTGTGATTTTTTCTCCCTTTCCCTTAGTAAAATCTTAGATTCCTGTAATTATTAGATCTAGAAGCCAATGGCATAATAAATATTCACTACAAATACATAAAATAATATATTGCTGGATAAACAAATAACTCAATCTGTGAAGACATCTTCCTGCTTCTGATCTTTTTTCAACCTTTCTCTTTTGGTAAAATCTTTTGGCAGAGGAAACATTGTTGCCACTGTGACAAACACTACCGTGGAGATTATAGTCTCAGAGCATGTCTTTGGTTCTGTTTATGGTGAAGATGGCGGCAATTTAGATCGAATTAGACAGGTTTGCGATTATTTATTCCCTTAGAAAGATGACATGAATTATTTAATTTGCCGTGGTTGGGCTGTGTTAAACTTTCTTCTGATTATTTGGTGTGTTTTGAATCATTTGATCATTGTGGTGTTTGGAGTGATAATGATTTTAATTAAGGTAGAAAAAAAAAAGGTATATATGATCTGAGTATGAAACTTGCATTTCATTTTGTTACATTTGTTAGTACTGTAACTCCAAAAAATTAGGGAATTTTAGCATTGTTTGCACCAAGTGAAATTTATTGGCCATTATCAAAGTTTAGACTTTCGTATCAAGACCTTTCATTTTAACCCTTTTTATGTTTAAACCGTTTAACAAAAAAATGCAGATGCATATATAATACTAATACAAATGAAAGGTTAAATTTTAATATACATAATTATTTTTAGATTATATTTGTTGTATATGGATTATGGTGTCCACGAGGGCAATCTCCTTAAGGACGGTTGTAAAATGTTTATTGGTGTCACTTTAATTATTAAAAAAGTCTCGCTTTCTCAATTTTTTATTTGTATAAGGATTATGGAGATAGCATATCTATTAAAGATGATATTAATATGCTCTAGTGTTGTTTCTGGGACCAGATTTCAGGTGCAGATGTTACTGTATTTGATCCCAGCAGCACCGGTACAAGTGGAGGGAAGGTTGTGATATCTGGAACACCTGATCAAACATTTGCAGCTCAGAGTTTGCTTCAAGCTTTCATTCAAACTGCACAAGCAAGCTGA
Protein sequence

>MS.gene069134.t1

MQDPTFSAAVETTDHHHPQPPPPPSSLKRNNRKRPVFKLLPGQIAFRLVCHSSTVGGLIGSSGSIVSQLRRETGCKIHCEDAVVGTDDRVILVIGSMSDRKGIVLGDREMEVSNAQEGVVRVFDRVWGLESEKGGNGEVYGKLLAHSSQIGAIVGKGGKNISNIRNNSGSNIRVCPAPHCAAKDEELILITGESLAVKKALIYVSYCLQDCPPMGKVSLNTPPTINSSDRSTSYTHEDLFPHLNSWLPSMEGLSINDASKQTTNANGNSSLDSKGSGQAVVFRLLCSNNVAGSVIGKKGSIVRTFEIQTGASIVFAPPLGQYEERIVTISAFENLESSNSPAQDAAILVFTRIAEDHIRNGFQPATAVESPVTARLLITTSTLHLLTGNEGQVISELREVSGADIQLLHGEPIPNASDNDVVVQITGGYRCVENALRKITSIIRDNPLPNEVLAEARVKPSFPLNKDTVRSKFITRKKPSFPFARFLPQNAGVYQTKKVTENVEPHKNLIENVEPGRGNIVATVTNTTVEIIVSEHVFGSVYGEDGGNLDRIRQISGADVTVFDPSSTGTSGGKVVISGTPDQTFAAQSLLQAFIQTAQAS