AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene069381

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene069381.t1 MTR_2g079990 93.296 358 18 2 1 358 3 354 0.0 682
MS.gene069381.t1 MTR_2g079990 86.528 386 18 3 1 358 3 382 0.0 666
MS.gene069381.t1 MTR_8g059170 65.330 349 96 8 1 347 1 326 6.19e-150 426
MS.gene069381.t1 MTR_3g088110 66.279 172 54 2 10 178 3 173 4.00e-78 241
MS.gene069381.t1 MTR_2g080010 64.162 173 49 2 11 170 12 184 2.33e-76 239
MS.gene069381.t1 MTR_8g094580 67.702 161 47 2 12 168 5 164 2.14e-75 234
MS.gene069381.t1 MTR_4g089135 63.388 183 42 3 14 171 15 197 1.22e-74 234
MS.gene069381.t1 MTR_2157s0010 50.584 257 105 7 10 254 4 250 1.92e-74 231
MS.gene069381.t1 MTR_3g096920 66.049 162 51 2 10 168 3 163 1.14e-73 230
MS.gene069381.t1 MTR_7g085220 63.314 169 49 3 11 166 5 173 4.81e-73 230
MS.gene069381.t1 MTR_7g100990 62.130 169 58 3 5 167 2 170 7.72e-71 224
MS.gene069381.t1 MTR_4g081870 63.057 157 54 1 10 162 5 161 2.80e-70 221
MS.gene069381.t1 MTR_5g041940 63.871 155 52 1 12 162 1 155 3.20e-70 220
MS.gene069381.t1 MTR_2g093810 59.756 164 60 2 10 167 10 173 2.72e-68 218
MS.gene069381.t1 MTR_3g096920 53.769 199 51 2 10 168 3 200 1.95e-67 216
MS.gene069381.t1 MTR_2g064090 55.063 158 68 2 9 163 1 158 3.10e-60 197
MS.gene069381.t1 MTR_5g076850 51.351 185 79 2 9 191 1 176 5.02e-60 204
MS.gene069381.t1 MTR_6g084430 55.414 157 68 1 13 169 4 158 5.18e-59 194
MS.gene069381.t1 MTR_3g435150 55.090 167 73 1 11 175 13 179 3.66e-58 191
MS.gene069381.t1 MTR_6g012670 52.000 175 82 1 4 176 10 184 4.83e-58 191
MS.gene069381.t1 MTR_3g064580 50.262 191 90 3 9 196 1 189 6.95e-58 199
MS.gene069381.t1 MTR_4g108760 53.293 167 76 1 11 175 14 180 1.51e-57 191
MS.gene069381.t1 MTR_7g085260 48.792 207 86 4 12 210 15 209 6.66e-57 190
MS.gene069381.t1 MTR_6g477900 51.592 157 74 1 9 163 1 157 1.44e-56 184
MS.gene069381.t1 MTR_5g040420 52.083 192 80 6 5 185 6 196 2.14e-56 189
MS.gene069381.t1 MTR_3g109340 54.430 158 68 2 13 168 21 176 1.34e-55 186
MS.gene069381.t1 MTR_3g109340 55.000 160 65 3 13 168 21 177 2.24e-55 185
MS.gene069381.t1 MTR_4g134460 56.051 157 62 3 16 169 56 208 3.11e-55 187
MS.gene069381.t1 MTR_3g070030 45.918 196 100 2 11 203 16 208 1.22e-54 183
MS.gene069381.t1 MTR_4g035590 55.263 152 62 2 14 162 8 156 2.15e-54 182
MS.gene069381.t1 MTR_1g008740 54.037 161 66 4 13 168 12 169 3.17e-54 182
MS.gene069381.t1 MTR_1g008740 54.037 161 66 4 13 168 26 183 3.86e-54 182
MS.gene069381.t1 MTR_6g011860 52.469 162 67 2 14 165 15 176 6.16e-54 182
MS.gene069381.t1 MTR_5g021710 44.670 197 101 3 14 204 8 202 6.57e-54 181
MS.gene069381.t1 MTR_8g467490 48.168 191 87 5 16 194 16 206 1.18e-53 182
MS.gene069381.t1 MTR_2g062730 50.595 168 74 4 10 170 6 171 5.56e-53 179
MS.gene069381.t1 MTR_2g078700 55.000 160 60 3 14 165 23 178 6.92e-53 179
MS.gene069381.t1 MTR_1g096430 46.821 173 87 2 14 183 7 177 2.49e-52 177
MS.gene069381.t1 MTR_5g014300 51.786 168 67 4 9 166 1 164 2.83e-52 176
MS.gene069381.t1 MTR_8g076110 48.765 162 78 2 9 167 1 160 3.89e-52 175
MS.gene069381.t1 MTR_6g032770 46.759 216 87 6 12 211 16 219 1.48e-51 176
MS.gene069381.t1 MTR_5g090970 47.150 193 89 3 16 196 20 211 1.88e-51 174
MS.gene069381.t1 MTR_4g036030 50.658 152 70 2 14 162 7 156 1.97e-51 174
MS.gene069381.t1 MTR_8g024480 47.879 165 74 2 10 162 11 175 3.59e-51 176
MS.gene069381.t1 MTR_4g098630 44.949 198 103 3 13 205 5 201 7.94e-51 172
MS.gene069381.t1 MTR_7g005280 54.658 161 66 3 10 168 11 166 8.72e-51 170
MS.gene069381.t1 MTR_5g090970 47.150 193 88 4 16 196 20 210 1.41e-50 171
MS.gene069381.t1 MTR_2g064470 44.898 196 91 5 9 199 6 189 2.41e-50 171
MS.gene069381.t1 MTR_4g101680 51.316 152 69 2 14 162 7 156 3.12e-50 172
MS.gene069381.t1 MTR_7g011130 38.224 259 136 4 11 253 16 266 3.83e-50 171
MS.gene069381.t1 MTR_2g068920 41.736 242 110 8 16 239 23 251 5.09e-50 169
MS.gene069381.t1 MTR_2g068880 49.133 173 72 4 16 172 24 196 1.41e-48 166
MS.gene069381.t1 MTR_5g012080 50.000 154 70 4 14 162 7 158 1.49e-48 167
MS.gene069381.t1 MTR_8g094580 69.091 110 29 2 63 168 2 110 1.58e-48 163
MS.gene069381.t1 MTR_7g011120 46.108 167 81 1 11 168 5 171 3.29e-48 165
MS.gene069381.t1 MTR_1g069805 43.602 211 92 7 1 194 1 201 6.57e-47 160
MS.gene069381.t1 MTR_3g093040 48.148 162 78 3 9 166 103 262 6.68e-47 162
MS.gene069381.t1 MTR_3g096140 46.309 149 78 1 16 162 9 157 1.07e-46 160
MS.gene069381.t1 MTR_5g069030 50.000 164 77 2 4 162 12 175 2.09e-46 167
MS.gene069381.t1 MTR_3g096140 46.309 149 78 1 16 162 9 157 6.93e-46 160
MS.gene069381.t1 MTR_8g063550 42.614 176 96 2 9 182 1 173 7.31e-46 160
MS.gene069381.t1 MTR_2g086880 48.408 157 72 3 9 164 13 161 9.52e-46 164
MS.gene069381.t1 MTR_2g086880 48.408 157 72 3 9 164 13 161 1.18e-45 164
MS.gene069381.t1 MTR_7g097090 48.148 162 74 3 1 160 1 154 1.59e-45 157
MS.gene069381.t1 MTR_3g093050 48.750 160 80 1 9 166 17 176 2.43e-45 164
MS.gene069381.t1 MTR_8g063550 42.614 176 96 2 9 182 1 173 2.94e-45 160
MS.gene069381.t1 MTR_8g063550 42.614 176 96 2 9 182 1 173 3.88e-45 160
MS.gene069381.t1 MTR_3g093050 48.750 160 80 1 9 166 17 176 4.68e-45 163
MS.gene069381.t1 MTR_1g090723 48.718 156 77 2 16 168 10 165 7.42e-45 163
MS.gene069381.t1 MTR_3g116070 52.857 140 63 2 3 139 12 151 1.28e-44 157
MS.gene069381.t1 MTR_1g097300 45.283 159 85 1 12 168 17 175 1.46e-44 161
MS.gene069381.t1 MTR_1g090720 48.521 169 76 3 13 173 41 206 2.63e-44 159
MS.gene069381.t1 MTR_0036s0150 38.462 234 122 6 16 246 7 221 2.85e-44 160
MS.gene069381.t1 MTR_4g075980 49.375 160 72 4 11 167 13 166 3.22e-44 154
MS.gene069381.t1 MTR_1g090723 48.718 156 76 3 16 168 10 164 1.31e-43 159
MS.gene069381.t1 MTR_1g090723 48.718 156 76 3 16 168 10 164 1.56e-43 159
MS.gene069381.t1 MTR_8g093580 41.477 176 98 2 9 182 1 173 1.88e-43 157
MS.gene069381.t1 MTR_3g098810 47.531 162 73 3 14 165 14 173 3.10e-41 145
MS.gene069381.t1 MTR_8g099750 46.405 153 73 3 14 159 14 164 6.28e-41 144
MS.gene069381.t1 MTR_3g070040 42.105 190 100 5 18 203 12 195 2.35e-40 145
MS.gene069381.t1 MTR_3g096140 44.030 134 73 1 31 162 3 136 1.42e-37 138
MS.gene069381.t1 MTR_3g098810 51.515 132 58 2 14 141 14 143 1.23e-36 130
MS.gene069381.t1 MTR_4g094302 40.123 162 81 3 14 167 11 164 9.41e-36 129
MS.gene069381.t1 MTR_2g086690 45.570 158 72 5 15 160 5 160 1.64e-35 130
MS.gene069381.t1 MTR_8g023840 46.104 154 66 6 14 159 11 155 9.86e-35 132
MS.gene069381.t1 MTR_7g105170 36.598 194 103 8 14 189 4 195 1.24e-34 128
MS.gene069381.t1 MTR_4g052620 43.038 158 77 6 14 160 5 160 1.91e-33 125
MS.gene069381.t1 MTR_4g094302 44.531 128 61 2 14 139 11 130 7.96e-33 120
MS.gene069381.t1 MTR_8g023900 36.123 227 113 11 1 206 173 388 2.70e-31 123
MS.gene069381.t1 MTR_8g023900 40.252 159 86 5 9 162 7 161 3.26e-29 117
MS.gene069381.t1 MTR_8g023930 35.545 211 110 10 14 215 24 217 1.20e-29 119
MS.gene069381.t1 MTR_8g023860 40.909 154 74 6 14 159 12 156 2.01e-29 117
MS.gene069381.t1 MTR_8g093790 35.294 204 107 7 10 213 6 184 1.88e-25 101
MS.gene069381.t1 MTR_8g023880 39.053 169 74 7 13 162 6 164 5.49e-25 102
MS.gene069381.t1 MTR_7g070140 56.790 81 33 1 67 145 17 97 9.55e-23 92.8
MS.gene069381.t1 MTR_3g096400 30.952 210 117 6 12 207 5 200 3.05e-21 90.9
MS.gene069381.t1 MTR_7g083360 31.206 141 88 5 10 144 6 143 3.08e-18 81.3
MS.gene069381.t1 MTR_7g083330 32.558 129 81 4 12 137 16 141 6.09e-14 70.1
MS.gene069381.t1 MTR_7g070150 53.448 58 24 1 111 168 9 63 3.72e-13 65.1
MS.gene069381.t1 MTR_8g102240 32.895 152 76 5 12 139 45 194 5.13e-12 67.4
MS.gene069381.t1 MTR_8g102240 32.895 152 76 5 12 139 45 194 5.14e-12 67.4
MS.gene069381.t1 MTR_7g116460 35.714 154 83 9 20 163 11 158 5.68e-12 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene069381.t1 AT4G27410 78.636 220 46 1 1 220 1 219 7.82e-124 358
MS.gene069381.t1 AT1G52890 57.349 347 115 9 1 345 1 316 5.95e-122 354
MS.gene069381.t1 AT4G27410 72.996 237 46 2 1 220 1 236 2.29e-119 348
MS.gene069381.t1 AT3G15500 68.924 251 71 4 1 247 1 248 9.99e-118 343
MS.gene069381.t1 AT3G04070 62.694 193 57 5 6 185 4 194 1.26e-76 239
MS.gene069381.t1 AT1G01720 65.341 176 55 3 12 182 5 179 3.18e-76 237
MS.gene069381.t1 AT5G63790 59.162 191 69 3 10 195 46 232 2.47e-74 233
MS.gene069381.t1 AT5G63790 59.162 191 69 3 10 195 56 242 2.90e-74 233
MS.gene069381.t1 AT5G08790 64.072 167 54 2 10 171 3 168 4.49e-74 231
MS.gene069381.t1 AT1G61110 66.477 176 43 4 14 175 16 189 3.69e-73 230
MS.gene069381.t1 AT1G77450 65.432 162 52 2 10 168 6 166 6.22e-73 227
MS.gene069381.t1 AT3G04070 57.895 209 57 6 6 185 4 210 1.21e-72 230
MS.gene069381.t1 AT1G69490 62.963 162 56 1 10 167 5 166 4.12e-71 223
MS.gene069381.t1 AT3G15510 64.417 163 45 3 18 167 21 183 7.54e-70 223
MS.gene069381.t1 AT3G18400 43.388 242 128 3 14 248 5 244 1.08e-62 203
MS.gene069381.t1 AT1G52880 63.125 160 47 2 18 165 21 180 2.45e-61 199
MS.gene069381.t1 AT1G65910 48.990 198 96 3 9 202 1 197 6.12e-59 201
MS.gene069381.t1 AT5G07680 48.293 205 104 1 1 203 4 208 7.04e-59 193
MS.gene069381.t1 AT3G17730 46.114 193 92 3 9 198 1 184 2.49e-58 189
MS.gene069381.t1 AT5G61430 45.299 234 109 5 11 225 13 246 3.07e-58 192
MS.gene069381.t1 AT2G02450 52.874 174 79 2 16 188 53 224 8.62e-58 192
MS.gene069381.t1 AT2G02450 52.874 174 79 2 16 188 53 224 1.43e-57 192
MS.gene069381.t1 AT5G07680 49.485 194 96 1 12 203 1 194 2.05e-57 189
MS.gene069381.t1 AT2G24430 55.625 160 68 2 13 170 15 173 3.12e-57 189
MS.gene069381.t1 AT2G24430 55.625 160 68 2 13 170 15 173 3.12e-57 189
MS.gene069381.t1 AT3G03200 48.691 191 91 3 9 196 1 187 6.82e-57 192
MS.gene069381.t1 AT5G18270 49.505 202 95 4 12 210 19 216 1.64e-56 187
MS.gene069381.t1 AT5G17260 53.049 164 74 2 9 169 1 164 2.34e-56 191
MS.gene069381.t1 AT5G39610 49.749 199 84 4 11 195 17 213 7.90e-56 184
MS.gene069381.t1 AT1G26870 50.811 185 79 4 5 177 7 191 1.29e-55 187
MS.gene069381.t1 AT5G18270 48.515 202 97 4 12 210 19 216 1.37e-55 185
MS.gene069381.t1 AT5G39820 49.730 185 68 4 16 175 22 206 1.23e-54 182
MS.gene069381.t1 AT2G43000 54.194 155 70 1 16 169 20 174 1.28e-54 181
MS.gene069381.t1 AT3G04060 49.505 202 90 5 12 210 18 210 2.64e-54 182
MS.gene069381.t1 AT2G33480 57.143 154 63 1 12 165 13 163 5.89e-54 179
MS.gene069381.t1 AT4G10350 51.974 152 70 1 14 162 9 160 1.00e-53 180
MS.gene069381.t1 AT5G53950 56.051 157 65 2 14 166 17 173 4.81e-53 179
MS.gene069381.t1 AT2G18060 48.171 164 80 2 7 167 2 163 4.90e-53 179
MS.gene069381.t1 AT2G18060 48.171 164 80 2 7 167 2 163 4.90e-53 179
MS.gene069381.t1 AT2G33480 57.143 154 61 2 12 165 13 161 6.66e-53 176
MS.gene069381.t1 AT1G71930 42.640 197 103 3 7 195 2 196 6.84e-53 178
MS.gene069381.t1 AT1G71930 42.640 197 103 3 7 195 2 196 6.84e-53 178
MS.gene069381.t1 AT1G33280 52.632 152 66 2 14 162 8 156 1.70e-52 176
MS.gene069381.t1 AT1G79580 54.140 157 65 3 10 162 13 166 2.07e-52 178
MS.gene069381.t1 AT1G79580 54.140 157 65 3 10 162 13 166 2.07e-52 178
MS.gene069381.t1 AT1G79580 54.140 157 65 3 10 162 13 166 2.07e-52 178
MS.gene069381.t1 AT1G79580 54.140 157 65 3 10 162 13 166 2.07e-52 178
MS.gene069381.t1 AT1G79580 54.140 157 65 3 10 162 13 166 2.07e-52 178
MS.gene069381.t1 AT1G54330 52.866 157 69 2 9 163 1 154 3.08e-52 175
MS.gene069381.t1 AT5G46590 55.195 154 65 3 14 163 6 159 3.89e-52 175
MS.gene069381.t1 AT3G29035 53.750 160 72 1 11 168 21 180 6.14e-52 175
MS.gene069381.t1 AT5G13180 56.604 159 63 4 12 168 12 166 6.88e-52 173
MS.gene069381.t1 AT3G15170 53.896 154 67 2 14 163 20 173 2.64e-51 173
MS.gene069381.t1 AT4G17980 53.750 160 60 4 14 163 6 161 3.88e-51 171
MS.gene069381.t1 AT4G17980 52.121 165 65 4 9 163 1 161 7.00e-51 171
MS.gene069381.t1 AT4G36160 51.634 153 69 2 13 162 9 159 1.03e-50 174
MS.gene069381.t1 AT4G36160 51.634 153 69 2 13 162 9 159 1.03e-50 174
MS.gene069381.t1 AT1G32510 43.182 220 100 5 14 208 6 225 1.06e-50 171
MS.gene069381.t1 AT4G36160 51.634 153 69 2 13 162 13 163 1.08e-50 174
MS.gene069381.t1 AT5G66300 50.000 156 74 2 13 165 11 165 1.71e-50 171
MS.gene069381.t1 AT1G56010 46.875 160 81 2 9 164 14 173 1.73e-50 171
MS.gene069381.t1 AT1G12260 50.641 156 72 2 14 166 7 160 1.94e-50 172
MS.gene069381.t1 AT3G12977 46.541 159 84 1 9 166 13 171 2.14e-50 170
MS.gene069381.t1 AT1G12260 50.641 156 72 2 14 166 7 160 3.19e-50 173
MS.gene069381.t1 AT3G10480 50.633 158 76 1 9 164 22 179 3.67e-50 174
MS.gene069381.t1 AT1G76420 48.837 172 77 3 1 162 1 171 5.00e-50 171
MS.gene069381.t1 AT5G62380 51.974 152 68 2 14 162 7 156 6.58e-50 171
MS.gene069381.t1 AT5G62380 51.974 152 68 2 14 162 7 156 6.58e-50 171
MS.gene069381.t1 AT1G33060 48.466 163 82 1 9 169 19 181 1.34e-49 176
MS.gene069381.t1 AT1G33060 48.466 163 82 1 9 169 19 181 1.37e-49 176
MS.gene069381.t1 AT1G32770 45.604 182 85 3 10 177 12 193 2.09e-49 169
MS.gene069381.t1 AT1G62700 50.641 156 72 2 14 166 7 160 2.34e-49 171
MS.gene069381.t1 AT1G62700 50.641 156 72 2 14 166 7 160 2.34e-49 171
MS.gene069381.t1 AT5G46590 56.028 141 59 2 14 151 6 146 2.79e-49 167
MS.gene069381.t1 AT2G46770 41.038 212 106 3 10 202 12 223 7.33e-49 168
MS.gene069381.t1 AT3G10480 50.314 159 76 2 9 164 22 180 1.05e-48 170
MS.gene069381.t1 AT4G35580 45.408 196 99 3 13 206 8 197 1.53e-48 171
MS.gene069381.t1 AT4G35580 45.408 196 99 3 13 206 8 197 1.69e-48 171
MS.gene069381.t1 AT3G10500 50.000 158 77 1 13 168 8 165 1.78e-48 171
MS.gene069381.t1 AT4G35580 45.408 196 99 3 13 206 8 197 1.83e-48 171
MS.gene069381.t1 AT5G24590 42.929 198 105 3 4 198 3 195 4.26e-48 169
MS.gene069381.t1 AT5G04410 50.000 158 77 1 13 168 8 165 5.31e-48 171
MS.gene069381.t1 AT3G10490 50.323 155 74 2 13 164 26 180 8.20e-48 162
MS.gene069381.t1 AT3G10490 50.000 158 70 3 13 164 26 180 3.84e-47 166
MS.gene069381.t1 AT3G61910 43.478 184 88 3 10 177 7 190 1.56e-46 161
MS.gene069381.t1 AT2G17040 40.909 220 116 5 16 229 8 219 4.00e-46 159
MS.gene069381.t1 AT3G49530 47.134 157 80 2 9 162 8 164 4.56e-45 159
MS.gene069381.t1 AT3G12910 38.783 263 123 9 4 237 15 268 4.75e-45 157
MS.gene069381.t1 AT1G34180 45.161 155 83 1 16 168 18 172 7.96e-45 160
MS.gene069381.t1 AT3G49530 47.134 157 80 2 9 162 8 164 1.29e-44 159
MS.gene069381.t1 AT2G27300 38.009 221 110 5 9 210 9 221 3.43e-44 155
MS.gene069381.t1 AT5G64060 44.586 157 85 1 9 163 1 157 4.96e-44 155
MS.gene069381.t1 AT1G34180 45.161 155 83 1 16 168 18 172 4.98e-44 160
MS.gene069381.t1 AT1G34190 43.871 155 85 1 16 168 18 172 6.49e-44 159
MS.gene069381.t1 AT3G10480 43.085 188 71 3 13 164 26 213 6.61e-44 159
MS.gene069381.t1 AT5G22290 41.304 184 92 5 16 192 23 197 7.48e-44 154
MS.gene069381.t1 AT1G34180 42.515 167 82 1 16 168 18 184 2.14e-42 153
MS.gene069381.t1 AT4G28530 45.556 180 72 6 1 162 1 172 3.79e-42 150
MS.gene069381.t1 AT3G44290 43.396 159 78 3 16 169 16 167 4.21e-42 147
MS.gene069381.t1 AT1G34180 42.515 167 82 1 16 168 18 184 9.76e-42 154
MS.gene069381.t1 AT3G44290 43.396 159 78 3 16 169 16 167 2.36e-41 148
MS.gene069381.t1 AT5G09330 42.675 157 88 1 9 163 1 157 6.02e-41 150
MS.gene069381.t1 AT5G09330 42.675 157 88 1 9 163 1 157 6.02e-41 150
MS.gene069381.t1 AT5G09330 42.675 157 88 1 9 163 1 157 6.02e-41 150
MS.gene069381.t1 AT5G09330 42.675 157 88 1 9 163 1 157 6.02e-41 150
MS.gene069381.t1 AT5G09330 42.675 157 88 1 9 163 1 157 6.02e-41 150
MS.gene069381.t1 AT1G32870 50.314 159 73 3 14 168 10 166 6.88e-41 150
MS.gene069381.t1 AT1G32870 50.314 159 73 3 14 168 10 166 7.52e-41 150
MS.gene069381.t1 AT1G32870 50.314 159 73 3 14 168 46 202 1.35e-40 150
MS.gene069381.t1 AT5G61430 42.308 182 86 5 63 225 2 183 1.63e-35 130
MS.gene069381.t1 AT4G10350 55.208 96 43 0 67 162 18 113 1.13e-33 126
MS.gene069381.t1 AT1G56010 51.429 105 48 1 63 164 2 106 2.19e-33 125
MS.gene069381.t1 AT5G64530 39.306 173 77 4 12 168 1 161 3.07e-33 122
MS.gene069381.t1 AT2G33480 57.576 99 42 0 67 165 8 106 6.43e-33 122
MS.gene069381.t1 AT3G44350 40.625 160 84 5 17 167 8 165 9.00e-33 122
MS.gene069381.t1 AT3G12977 51.429 105 50 1 63 166 14 118 1.72e-32 121
MS.gene069381.t1 AT5G22380 37.245 196 111 8 17 201 8 202 6.09e-31 117
MS.gene069381.t1 AT5G04395 42.857 147 66 3 10 139 24 169 1.48e-30 115
MS.gene069381.t1 AT5G64530 44.697 132 59 3 12 141 1 120 2.97e-30 113
MS.gene069381.t1 AT3G44350 42.029 138 70 4 14 143 5 140 1.62e-29 111
MS.gene069381.t1 AT4G01550 37.714 175 90 7 17 182 7 171 1.07e-26 110
MS.gene069381.t1 AT3G04420 41.732 127 70 2 15 137 4 130 2.65e-26 106
MS.gene069381.t1 AT2G43000 50.526 95 46 1 76 169 2 96 3.80e-26 103
MS.gene069381.t1 AT4G28530 35.758 165 51 3 14 162 10 135 4.85e-26 106
MS.gene069381.t1 AT3G04420 41.732 127 70 2 15 137 4 130 5.73e-26 107
MS.gene069381.t1 AT4G01520 35.632 174 97 6 15 178 5 173 7.88e-25 102
MS.gene069381.t1 AT4G27410 62.069 87 32 1 134 220 1 86 2.18e-24 98.2
MS.gene069381.t1 AT4G01540 36.047 172 95 6 17 178 7 173 2.36e-24 103
MS.gene069381.t1 AT4G01540 36.047 172 95 6 17 178 7 173 2.54e-24 103
MS.gene069381.t1 AT4G01540 36.257 171 94 6 17 177 7 172 3.69e-24 103
MS.gene069381.t1 AT4G01540 36.257 171 94 6 17 177 7 172 3.70e-24 103
MS.gene069381.t1 AT1G02230 41.538 130 66 5 15 137 4 130 3.20e-23 99.4
MS.gene069381.t1 AT1G02250 35.503 169 95 5 12 173 1 162 3.29e-22 96.7
MS.gene069381.t1 AT1G02220 37.692 130 74 3 12 137 1 127 3.89e-21 94.0
MS.gene069381.t1 AT3G56530 36.601 153 92 4 11 160 49 199 1.49e-20 91.3
MS.gene069381.t1 AT3G10490 49.367 79 39 1 87 164 2 80 2.59e-20 91.3
MS.gene069381.t1 AT3G10490 49.367 79 39 1 87 164 2 80 2.59e-20 91.3
MS.gene069381.t1 AT2G18060 47.368 76 38 1 92 167 2 75 8.99e-19 85.5
MS.gene069381.t1 AT5G50820 37.226 137 70 5 12 142 15 141 4.37e-18 81.6
MS.gene069381.t1 AT3G55210 34.161 161 88 5 14 160 11 167 6.84e-18 83.2
MS.gene069381.t1 AT5G22290 39.623 106 49 4 93 192 2 98 2.99e-17 80.5
MS.gene069381.t1 AT1G01010 34.146 164 85 8 17 166 6 160 3.05e-17 82.8
MS.gene069381.t1 AT5G14000 31.646 158 97 4 12 165 13 163 2.24e-16 77.4
MS.gene069381.t1 AT5G14000 34.615 130 81 2 12 139 13 140 8.08e-16 74.3
MS.gene069381.t1 AT3G04430 35.606 132 71 5 20 138 6 136 4.19e-12 65.1
MS.gene069381.t1 AT4G28500 34.641 153 80 6 14 148 59 209 3.27e-11 63.9
MS.gene069381.t1 AT4G29230 31.210 157 81 5 8 139 42 196 5.08e-11 64.3

Find 83 sgRNAs with CRISPR-Local

Find 124 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTAAAGGCACCAAAACTAAT+TGG 0.246600 2.3:-17848140 MS.gene069381:CDS
CGGTTGACCCGTTTGGGTTT+AGG 0.268222 2.3:-17846945 MS.gene069381:CDS
CCAGATCCAGCTACTCTATT+TGG 0.287866 2.3:+17848258 None:intergenic
CCGGTTCAACTAGTTGGATT+TGG 0.305568 2.3:-17846919 MS.gene069381:CDS
ATGCATAATCCAATTAGTTT+TGG 0.307345 2.3:+17848131 None:intergenic
GATTCATCTTCTCTTCTTGT+TGG 0.315390 2.3:+17847289 None:intergenic
TGCTGCAAATAACAATTTCA+TGG 0.318107 2.3:-17847253 MS.gene069381:CDS
CTAATCCGGTTGACCCGTTT+GGG 0.322735 2.3:-17846951 MS.gene069381:CDS
TGTTATAATCTTGTCTGTTC+CGG 0.334569 2.3:+17848221 None:intergenic
CTATTTGGCCTAGTCCCATT+TGG 0.338304 2.3:+17848273 None:intergenic
TTTGGATACTTCCTATCTCT+TGG 0.340923 2.3:+17848291 None:intergenic
CTACTTGAAACGACGCCATT+TGG 0.343967 2.3:+17847450 None:intergenic
GAAACGACGCCATTTGGAAT+AGG 0.373309 2.3:+17847456 None:intergenic
ACTAATCCGGTTGACCCGTT+TGG 0.373818 2.3:-17846952 MS.gene069381:CDS
AACCAAGTTGAGAATTCGTC+TGG 0.381998 2.3:-17847021 MS.gene069381:CDS
CCAAATAGAGTAGCTGGATC+TGG 0.382299 2.3:-17848258 MS.gene069381:CDS
TGTCCCCACATTATGTCAAT+TGG 0.390928 2.3:-17847124 MS.gene069381:CDS
CTTCCTATCCGGTTCATTGT+TGG 0.391276 2.3:+17846893 None:intergenic
CCAAATCCAACTAGTTGAAC+CGG 0.394658 2.3:+17846919 None:intergenic
TTGAATTGCAGCTAGATGAT+TGG 0.399386 2.3:-17847521 MS.gene069381:intron
CCCGTTTGGGTTTAGGTACC+CGG 0.405638 2.3:-17846938 MS.gene069381:CDS
TGAATTGCAGCTAGATGATT+GGG 0.406156 2.3:-17847520 MS.gene069381:intron
ACAAATGAAGGTAGAAAAGT+TGG 0.415542 2.3:-17848201 MS.gene069381:CDS
CTAAACCCAAACGGGTCAAC+CGG 0.415585 2.3:+17846946 None:intergenic
ATTTCTTTAGTCCAAGAGAT+AGG 0.426397 2.3:-17848302 MS.gene069381:CDS
CAAATAACAATTTCATGGAT+TGG 0.437272 2.3:-17847248 MS.gene069381:CDS
GAGTAGCTGGATCTGGGTAT+TGG 0.458403 2.3:-17848251 MS.gene069381:CDS
TCCTCTTCAGTCGGATGCAC+GGG 0.469154 2.3:+17847066 None:intergenic
AGAGATAGGAAGTATCCAAA+TGG 0.473419 2.3:-17848288 MS.gene069381:CDS
TATGTTGGTAAAGCTCCTAA+AGG 0.483857 2.3:-17848156 MS.gene069381:CDS
CCGGGTACCTAAACCCAAAC+GGG 0.483949 2.3:+17846938 None:intergenic
TTCTAGAACGTCGTCGAGGT+GGG 0.485920 2.3:+17847383 None:intergenic
ACTAGGCCAAATAGAGTAGC+TGG 0.487807 2.3:-17848264 MS.gene069381:CDS
TGGGGACAGAAGGGACATAA+AGG 0.491862 2.3:+17847139 None:intergenic
ACCGGGTACCTAAACCCAAA+CGG 0.492810 2.3:+17846937 None:intergenic
AAGCAATGGTCGTCAATTTG+TGG 0.495194 2.3:+17847354 None:intergenic
AACAAGAAGCTCTTCATCAG+TGG 0.495470 2.3:+17848599 None:intergenic
ATCTCTACAAATTCGACCCA+TGG 0.496775 2.3:-17848515 MS.gene069381:CDS
GACAAGATTATAACAAATGA+AGG 0.510810 2.3:-17848213 MS.gene069381:CDS
TGACATAATGTGGGGACAGA+AGG 0.514449 2.3:+17847129 None:intergenic
CAAATAGAGTAGCTGGATCT+GGG 0.514453 2.3:-17848257 MS.gene069381:CDS
TATCTATGTCGTAAAGTAGC+TGG 0.519439 2.3:-17848573 MS.gene069381:CDS
AGAGTCCAATTGACATAATG+TGG 0.520252 2.3:+17847119 None:intergenic
AGGTACCCGGTTCAACTAGT+TGG 0.522644 2.3:-17846925 MS.gene069381:CDS
CTCCTCTTCAGTCGGATGCA+CGG 0.528695 2.3:+17847065 None:intergenic
GGAAGTATCCAAATGGGACT+AGG 0.531933 2.3:-17848281 MS.gene069381:CDS
GAGATAGGAAGTATCCAAAT+GGG 0.536430 2.3:-17848287 MS.gene069381:CDS
ACCCAGACGAATTCTCAACT+TGG 0.539808 2.3:+17847019 None:intergenic
AACTCACTTGGAAGAACCCA+TGG 0.541829 2.3:+17848498 None:intergenic
AGGAATGGGATACACTAATC+CGG 0.545779 2.3:-17846965 MS.gene069381:CDS
CTTTGAACCTCCTCTTCAGT+CGG 0.546459 2.3:+17847057 None:intergenic
ATTCTAGAACGTCGTCGAGG+TGG 0.546760 2.3:+17847382 None:intergenic
CACGTGGCAGCTTGAAGCAA+TGG 0.554810 2.3:+17847340 None:intergenic
ATTGGACTCTTCCGTTATCA+CGG 0.556755 2.3:-17847106 MS.gene069381:CDS
GCACAATTGAGTTTACCTCC+TGG 0.560444 2.3:-17848636 MS.gene069381:CDS
ACAAGAAGCTCTTCATCAGT+GGG 0.569952 2.3:+17848600 None:intergenic
GACATAATGTGGGGACAGAA+GGG 0.579791 2.3:+17847130 None:intergenic
TTTCAAGACGGTCAAACTCA+AGG 0.582786 2.3:-17847189 MS.gene069381:CDS
GGTAAACTCAATTGTGCAAG+AGG 0.592070 2.3:+17848642 None:intergenic
TATAATCTTGTCTGTTCCGG+TGG 0.597425 2.3:+17848224 None:intergenic
TCTGGGTATTGGAAAGCCAC+CGG 0.602092 2.3:-17848240 MS.gene069381:CDS
GAGTCCAATTGACATAATGT+GGG 0.603037 2.3:+17847120 None:intergenic
CTGAAGAGGAGGTTCAAAGT+GGG 0.606883 2.3:-17847053 MS.gene069381:CDS
TCTCTACAAATTCGACCCAT+GGG 0.608644 2.3:-17848514 MS.gene069381:CDS
ACCAAGTTGAGAATTCGTCT+GGG 0.609603 2.3:-17847020 MS.gene069381:CDS
ACGTGTCAACTCGCTAAGAA+CGG 0.615896 2.3:-17847322 MS.gene069381:CDS
CAAATCCAACTAGTTGAACC+GGG 0.621401 2.3:+17846920 None:intergenic
ACCCGTGCATCCGACTGAAG+AGG 0.627654 2.3:-17847067 MS.gene069381:CDS
CGTGCATCCGACTGAAGAGG+AGG 0.634276 2.3:-17847064 MS.gene069381:CDS
GTGGGGTAAAATCTAAAACC+AGG 0.636836 2.3:+17848618 None:intergenic
ACTGAAGAGGAGGTTCAAAG+TGG 0.641217 2.3:-17847054 MS.gene069381:CDS
GACTCTTCACGAAACAACGG+TGG 0.660789 2.3:-17848093 MS.gene069381:CDS
GTTCTTAGCGAGTTGACACG+TGG 0.662417 2.3:+17847324 None:intergenic
CTTGACTCTTCACGAAACAA+CGG 0.662587 2.3:-17848096 MS.gene069381:CDS
TGAAGAGGAGGTTCAAAGTG+GGG 0.669043 2.3:-17847052 MS.gene069381:CDS
GAATACACTCAATATAGCAA+CGG 0.676166 2.3:-17847426 MS.gene069381:CDS
GTGATTCTAGAACGTCGTCG+AGG 0.677704 2.3:+17847379 None:intergenic
ACAGTAACAGGGTTTCAAGA+CGG 0.683973 2.3:-17847201 MS.gene069381:CDS
ACGAAACAACGGTGGCACCA+AGG 0.687136 2.3:-17848085 MS.gene069381:intron
ACTCACTTGGAAGAACCCAT+GGG 0.692817 2.3:+17848499 None:intergenic
AGTCCAATTGACATAATGTG+GGG 0.700465 2.3:+17847121 None:intergenic
GGGTAAAATCTAAAACCAGG+AGG 0.717933 2.3:+17848621 None:intergenic
CAAGAAGCTCTTCATCAGTG+GGG 0.743838 2.3:+17848601 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CTTTAATATAAATAAACCAT+AGG + chr2.3:17847194-17847213 None:intergenic 15.0%
!!! ATATTTTAAAATGGAACAAA+AGG + chr2.3:17847933-17847952 None:intergenic 15.0%
!!! TATTACAAAGAATTTTATCT+AGG - chr2.3:17847625-17847644 MS.gene069381:intron 15.0%
!!! TTAAAAAAGAGTTTGATAAT+TGG + chr2.3:17847874-17847893 None:intergenic 15.0%
!! AATAATCCCATAAAACAATT+TGG + chr2.3:17847990-17848009 None:intergenic 20.0%
!! GAATTGTGAAATAAATAATG+TGG + chr2.3:17847906-17847925 None:intergenic 20.0%
!! GATTTAAATAATTGTACCTA+TGG - chr2.3:17847175-17847194 MS.gene069381:CDS 20.0%
!! GTCAATATTTGATATTTCAA+AGG - chr2.3:17847750-17847769 MS.gene069381:intron 20.0%
!! TAAAATTTGTGATCATGATT+AGG + chr2.3:17847834-17847853 None:intergenic 20.0%
!!! AGGAAGTGAATATTTTAAAA+TGG + chr2.3:17847942-17847961 None:intergenic 20.0%
!!! ATTTGTTTTTGTTAGAATCA+CGG - chr2.3:17847141-17847160 MS.gene069381:CDS 20.0%
!!! GTTTTACCAAATTGTTTTAT+GGG - chr2.3:17847981-17848000 MS.gene069381:intron 20.0%
!!! TGTTTTACCAAATTGTTTTA+TGG - chr2.3:17847980-17847999 MS.gene069381:intron 20.0%
! AAATAAATAATGTGGTGACA+AGG + chr2.3:17847898-17847917 None:intergenic 25.0%
! ATGAATGTCATATAATACCT+TGG + chr2.3:17847504-17847523 None:intergenic 25.0%
! CAAATAACAATTTCATGGAT+TGG - chr2.3:17848321-17848340 MS.gene069381:CDS 25.0%
! CAATTTGGTAAAACAGTAAA+AGG + chr2.3:17847975-17847994 None:intergenic 25.0%
! GACAAGATTATAACAAATGA+AGG - chr2.3:17847356-17847375 MS.gene069381:CDS 25.0%
! TAAAAAAATTGGGTGATACA+TGG - chr2.3:17847699-17847718 MS.gene069381:intron 25.0%
!! AAATGATTTTACTCAAGGAA+TGG - chr2.3:17848589-17848608 MS.gene069381:CDS 25.0%
!! AATGATTTTACTCAAGGAAT+GGG - chr2.3:17848590-17848609 MS.gene069381:CDS 25.0%
!!! AAAGCACTTGTTTTTTATGT+TGG - chr2.3:17847398-17847417 MS.gene069381:CDS 25.0%
!!! ATGCATAATCCAATTAGTTT+TGG + chr2.3:17847441-17847460 None:intergenic 25.0%
ACAAATGAAGGTAGAAAAGT+TGG - chr2.3:17847368-17847387 MS.gene069381:CDS 30.0%
ATAAACGTGTACGAAATAGT+TGG + chr2.3:17847104-17847123 None:intergenic 30.0%
ATTTCTTTAGTCCAAGAGAT+AGG - chr2.3:17847267-17847286 MS.gene069381:CDS 30.0%
GAATACACTCAATATAGCAA+CGG - chr2.3:17848143-17848162 MS.gene069381:CDS 30.0%
TAGGCTGATGATTTGAAAAT+GGG - chr2.3:17847644-17847663 MS.gene069381:intron 30.0%
TGCTGCAAATAACAATTTCA+TGG - chr2.3:17848316-17848335 MS.gene069381:CDS 30.0%
TGTTATAATCTTGTCTGTTC+CGG + chr2.3:17847351-17847370 None:intergenic 30.0%
! AAGAGTTTGATAATTGGCAA+AGG + chr2.3:17847868-17847887 None:intergenic 30.0%
! AGAGTTTGATAATTGGCAAA+GGG + chr2.3:17847867-17847886 None:intergenic 30.0%
! CAAGGAATGATGAATTTTAG+TGG - chr2.3:17848398-17848417 MS.gene069381:intron 30.0%
! GGTTCAAATGATTTTACTCA+AGG - chr2.3:17848584-17848603 MS.gene069381:CDS 30.0%
!! GTGATTAATTTGTGTAGGTA+AGG - chr2.3:17847220-17847239 MS.gene069381:CDS 30.0%
!! TGTGTGTGATTAATTTGTGT+AGG - chr2.3:17847215-17847234 MS.gene069381:CDS 30.0%
!!! CAATTTTTGGTGAGAAAGAA+TGG - chr2.3:17847243-17847262 MS.gene069381:CDS 30.0%
AGAGTCCAATTGACATAATG+TGG + chr2.3:17848453-17848472 None:intergenic 35.0%
AGTCCAATTGACATAATGTG+GGG + chr2.3:17848451-17848470 None:intergenic 35.0%
CAGTAAAAGGTCAAAAACAG+AGG + chr2.3:17847962-17847981 None:intergenic 35.0%
CTAGGCTGATGATTTGAAAA+TGG - chr2.3:17847643-17847662 MS.gene069381:intron 35.0%
GAGTCCAATTGACATAATGT+GGG + chr2.3:17848452-17848471 None:intergenic 35.0%
GATTCATCTTCTCTTCTTGT+TGG + chr2.3:17848283-17848302 None:intergenic 35.0%
GCACAAAAACCTATTCCAAA+TGG - chr2.3:17848104-17848123 MS.gene069381:CDS 35.0%
TATCTATGTCGTAAAGTAGC+TGG - chr2.3:17846996-17847015 MS.gene069381:CDS 35.0%
TGAATTGCAGCTAGATGATT+GGG - chr2.3:17848049-17848068 MS.gene069381:intron 35.0%
TTGAATTGCAGCTAGATGAT+TGG - chr2.3:17848048-17848067 MS.gene069381:intron 35.0%
TTTGGATACTTCCTATCTCT+TGG + chr2.3:17847281-17847300 None:intergenic 35.0%
! CGATTTTGAACACAGTAACA+GGG - chr2.3:17848357-17848376 MS.gene069381:intron 35.0%
! TATGTTGGTAAAGCTCCTAA+AGG - chr2.3:17847413-17847432 MS.gene069381:CDS 35.0%
! TCGATTTTGAACACAGTAAC+AGG - chr2.3:17848356-17848375 MS.gene069381:intron 35.0%
! TGTGTAGGTAAGGCAATTTT+TGG - chr2.3:17847230-17847249 MS.gene069381:CDS 35.0%
!! AGAGATAGGAAGTATCCAAA+TGG - chr2.3:17847281-17847300 MS.gene069381:CDS 35.0%
!! CTAAAGGCACCAAAACTAAT+TGG - chr2.3:17847429-17847448 MS.gene069381:CDS 35.0%
!! GAGATAGGAAGTATCCAAAT+GGG - chr2.3:17847282-17847301 MS.gene069381:CDS 35.0%
!!! CAATTAGTTTTGGTGCCTTT+AGG + chr2.3:17847431-17847450 None:intergenic 35.0%
AACAAGAAGCTCTTCATCAG+TGG + chr2.3:17846973-17846992 None:intergenic 40.0%
AAGCAATGGTCGTCAATTTG+TGG + chr2.3:17848218-17848237 None:intergenic 40.0%
ACAAGAAGCTCTTCATCAGT+GGG + chr2.3:17846972-17846991 None:intergenic 40.0%
ACAGTAACAGGGTTTCAAGA+CGG - chr2.3:17848368-17848387 MS.gene069381:intron 40.0%
AGGAATGGGATACACTAATC+CGG - chr2.3:17848604-17848623 MS.gene069381:CDS 40.0%
ATCTCTACAAATTCGACCCA+TGG - chr2.3:17847054-17847073 MS.gene069381:CDS 40.0%
ATTGGACTCTTCCGTTATCA+CGG - chr2.3:17848463-17848482 MS.gene069381:intron 40.0%
CAAATAGAGTAGCTGGATCT+GGG - chr2.3:17847312-17847331 MS.gene069381:CDS 40.0%
CAAATCCAACTAGTTGAACC+GGG + chr2.3:17848652-17848671 None:intergenic 40.0%
CCAAATCCAACTAGTTGAAC+CGG + chr2.3:17848653-17848672 None:intergenic 40.0%
CTTGACTCTTCACGAAACAA+CGG - chr2.3:17847473-17847492 MS.gene069381:CDS 40.0%
GGTAAACTCAATTGTGCAAG+AGG + chr2.3:17846930-17846949 None:intergenic 40.0%
TATAATCTTGTCTGTTCCGG+TGG + chr2.3:17847348-17847367 None:intergenic 40.0%
TCTCTACAAATTCGACCCAT+GGG - chr2.3:17847055-17847074 MS.gene069381:CDS 40.0%
TGTCCCCACATTATGTCAAT+TGG - chr2.3:17848445-17848464 MS.gene069381:intron 40.0%
TTTCAAGACGGTCAAACTCA+AGG - chr2.3:17848380-17848399 MS.gene069381:intron 40.0%
! AACCAAGTTGAGAATTCGTC+TGG - chr2.3:17848548-17848567 MS.gene069381:CDS 40.0%
! ACCAAGTTGAGAATTCGTCT+GGG - chr2.3:17848549-17848568 MS.gene069381:CDS 40.0%
! GGGTAAAATCTAAAACCAGG+AGG + chr2.3:17846951-17846970 None:intergenic 40.0%
! GTGGGGTAAAATCTAAAACC+AGG + chr2.3:17846954-17846973 None:intergenic 40.0%
! GTTGGTGAAGTTAACTCACT+TGG + chr2.3:17847086-17847105 None:intergenic 40.0%
!!! GCTAGTTTTCTCCGTGATAA+CGG + chr2.3:17848477-17848496 None:intergenic 40.0%
AACTCACTTGGAAGAACCCA+TGG + chr2.3:17847074-17847093 None:intergenic 45.0%
ACCCAGACGAATTCTCAACT+TGG + chr2.3:17848553-17848572 None:intergenic 45.0%
ACGTGTCAACTCGCTAAGAA+CGG - chr2.3:17848247-17848266 MS.gene069381:CDS 45.0%
ACTAGGCCAAATAGAGTAGC+TGG - chr2.3:17847305-17847324 MS.gene069381:CDS 45.0%
ACTCACTTGGAAGAACCCAT+GGG + chr2.3:17847073-17847092 None:intergenic 45.0%
ACTGAAGAGGAGGTTCAAAG+TGG - chr2.3:17848515-17848534 MS.gene069381:CDS 45.0%
CAAGAAGCTCTTCATCAGTG+GGG + chr2.3:17846971-17846990 None:intergenic 45.0%
CCAAATAGAGTAGCTGGATC+TGG - chr2.3:17847311-17847330 MS.gene069381:CDS 45.0%
CCAGATCCAGCTACTCTATT+TGG + chr2.3:17847314-17847333 None:intergenic 45.0%
CCGGTTCAACTAGTTGGATT+TGG - chr2.3:17848650-17848669 MS.gene069381:CDS 45.0%
CTACTTGAAACGACGCCATT+TGG + chr2.3:17848122-17848141 None:intergenic 45.0%
CTATTTGGCCTAGTCCCATT+TGG + chr2.3:17847299-17847318 None:intergenic 45.0%
CTGAAGAGGAGGTTCAAAGT+GGG - chr2.3:17848516-17848535 MS.gene069381:CDS 45.0%
CTTTGAACCTCCTCTTCAGT+CGG + chr2.3:17848515-17848534 None:intergenic 45.0%
GACATAATGTGGGGACAGAA+GGG + chr2.3:17848442-17848461 None:intergenic 45.0%
GCACAATTGAGTTTACCTCC+TGG - chr2.3:17846933-17846952 MS.gene069381:CDS 45.0%
TGAAGAGGAGGTTCAAAGTG+GGG - chr2.3:17848517-17848536 MS.gene069381:CDS 45.0%
TGACATAATGTGGGGACAGA+AGG + chr2.3:17848443-17848462 None:intergenic 45.0%
! GAAACGACGCCATTTGGAAT+AGG + chr2.3:17848116-17848135 None:intergenic 45.0%
!! GGAAGTATCCAAATGGGACT+AGG - chr2.3:17847288-17847307 MS.gene069381:CDS 45.0%
!!! TCGTCTGGGTTTTTTCAACG+CGG - chr2.3:17848563-17848582 MS.gene069381:CDS 45.0%
!!! AACAAATTTTTTAAAAAAAT+TGG - chr2.3:17847688-17847707 MS.gene069381:intron 5.0%
!!! ACAAATTTTTTAAAAAAATT+GGG - chr2.3:17847689-17847708 MS.gene069381:intron 5.0%
!!! TATTTATTATTTTTTTAAGA+AGG + chr2.3:17847797-17847816 None:intergenic 5.0%
ACCGGGTACCTAAACCCAAA+CGG + chr2.3:17848635-17848654 None:intergenic 50.0%
ACTAATCCGGTTGACCCGTT+TGG - chr2.3:17848617-17848636 MS.gene069381:CDS 50.0%
AGGTACCCGGTTCAACTAGT+TGG - chr2.3:17848644-17848663 MS.gene069381:CDS 50.0%
CTAAACCCAAACGGGTCAAC+CGG + chr2.3:17848626-17848645 None:intergenic 50.0%
CTAATCCGGTTGACCCGTTT+GGG - chr2.3:17848618-17848637 MS.gene069381:CDS 50.0%
GACTCTTCACGAAACAACGG+TGG - chr2.3:17847476-17847495 MS.gene069381:CDS 50.0%
GAGTAGCTGGATCTGGGTAT+TGG - chr2.3:17847318-17847337 MS.gene069381:CDS 50.0%
TGGGGACAGAAGGGACATAA+AGG + chr2.3:17848433-17848452 None:intergenic 50.0%
! GTTCTTAGCGAGTTGACACG+TGG + chr2.3:17848248-17848267 None:intergenic 50.0%
!! ATTCTAGAACGTCGTCGAGG+TGG + chr2.3:17848190-17848209 None:intergenic 50.0%
!! GTGATTCTAGAACGTCGTCG+AGG + chr2.3:17848193-17848212 None:intergenic 50.0%
!! TCTGGGTATTGGAAAGCCAC+CGG - chr2.3:17847329-17847348 MS.gene069381:CDS 50.0%
!! TTCTAGAACGTCGTCGAGGT+GGG + chr2.3:17848189-17848208 None:intergenic 50.0%
ACGAAACAACGGTGGCACCA+AGG - chr2.3:17847484-17847503 MS.gene069381:CDS 55.0%
CACGTGGCAGCTTGAAGCAA+TGG + chr2.3:17848232-17848251 None:intergenic 55.0%
CCGGGTACCTAAACCCAAAC+GGG + chr2.3:17848634-17848653 None:intergenic 55.0%
CTCCTCTTCAGTCGGATGCA+CGG + chr2.3:17848507-17848526 None:intergenic 55.0%
TCCTCTTCAGTCGGATGCAC+GGG + chr2.3:17848506-17848525 None:intergenic 55.0%
! CCCGTTTGGGTTTAGGTACC+CGG - chr2.3:17848631-17848650 MS.gene069381:CDS 55.0%
! CGGTTGACCCGTTTGGGTTT+AGG - chr2.3:17848624-17848643 MS.gene069381:CDS 55.0%
ACCCGTGCATCCGACTGAAG+AGG - chr2.3:17848502-17848521 MS.gene069381:intron 60.0%
CGTGCATCCGACTGAAGAGG+AGG - chr2.3:17848505-17848524 MS.gene069381:CDS 60.0%


Chromosome Type Strat End Strand Name
chr2.3 gene 17846906 17848685 17846906 ID=MS.gene069381
chr2.3 mRNA 17846906 17848685 17846906 ID=MS.gene069381.t1;Parent=MS.gene069381
chr2.3 exon 17848505 17848685 17848505 ID=MS.gene069381.t1.exon1;Parent=MS.gene069381.t1
chr2.3 CDS 17848505 17848685 17848505 ID=cds.MS.gene069381.t1;Parent=MS.gene069381.t1
chr2.3 exon 17848086 17848354 17848086 ID=MS.gene069381.t1.exon2;Parent=MS.gene069381.t1
chr2.3 CDS 17848086 17848354 17848086 ID=cds.MS.gene069381.t1;Parent=MS.gene069381.t1
chr2.3 exon 17846906 17847532 17846906 ID=MS.gene069381.t1.exon3;Parent=MS.gene069381.t1
chr2.3 CDS 17846906 17847532 17846906 ID=cds.MS.gene069381.t1;Parent=MS.gene069381.t1
Gene Sequence

>MS.gene069381

ATGGGAATTCAAGACAAAGATCCTCTTGCACAATTGAGTTTACCTCCTGGTTTTAGATTTTACCCCACTGATGAAGAGCTTCTTGTTCAATATCTATGTCGTAAAGTAGCTGGTCATCATTTTTCTCTTCAAATCATTGCTGAAATTGATCTCTACAAATTCGACCCATGGGTTCTTCCAAGTGAGTTAACTTCACCAACTATTTCGTACACGTTTATGTTTGATATCACAACGAATTTGTTTTTGTTAGAATCACGGTGAATCATCGTGATTTAAATAATTGTACCTATGGTTTATTTATATTAAAGTTGTGTGTGATTAATTTGTGTAGGTAAGGCAATTTTTGGTGAGAAAGAATGGTATTTCTTTAGTCCAAGAGATAGGAAGTATCCAAATGGGACTAGGCCAAATAGAGTAGCTGGATCTGGGTATTGGAAAGCCACCGGAACAGACAAGATTATAACAAATGAAGGTAGAAAAGTTGGTATAAAAAAAGCACTTGTTTTTTATGTTGGTAAAGCTCCTAAAGGCACCAAAACTAATTGGATTATGCATGAGTATCGACTACTTGACTCTTCACGAAACAACGGTGGCACCAAGGTATTATATGACATTCATTTTTTTTGTTACTATTTAACTATTTCAAATGTCTAAATTTAGCATTACTAATTTTTACTTAGTATATACACAAATAATTTTAAATTGATCACAATTCTCAATATTACAAAGAATTTTATCTAGGCTGATGATTTGAAAATGGGCAATCAAATATTGAGAATCACAACAAATTTTTTAAAAAAATTGGGTGATACATGGTTTAAATGAATTGCACTCATACATACACGTCAATATTTGATATTTCAAAGGATTAATATTAAATTTTTTTCTCCTTCTTAAAAAAATAATAAATATTTTTTTAATAATTCCTAATCATGATCACAAATTTTATTTTTTGAAACCCTTTGCCAATTATCAAACTCTTTTTTAAACCTTGTCACCACATTATTTATTTCACAATTCACTTCCTTTTGTTCCATTTTAAAATATTCACTTCCTCTGTTTTTGACCTTTTACTGTTTTACCAAATTGTTTTATGGGATTATTATTATTATTACAACGTTAATTTGTTGAAATTTTTGTTCTTGAATTGCAGCTAGATGATTGGGTTCTATGTCGTATCTACAAGAAAAATTCAAGTGCACAAAAACCTATTCCAAATGGCGTCGTTTCAAGTAGAGAATACACTCAATATAGCAACGGTTCATCGTCTTCTTCATCATCCCACCTCGACGACGTTCTAGAATCACTTCCACAAATTGACGACCATTGCTTCAAGCTGCCACGTGTCAACTCGCTAAGAACGGCGCAACATCACCAACAAGAAGAGAAGATGAATCTTCAAAATTTAAATGCTGCAAATAACAATTTCATGGATTGGTCTAATTCATCATCGATTTTGAACACAGTAACAGGGTTTCAAGACGGTCAAACTCAAGGAATGATGAATTTTAGTGGTTGCAATGACCTTTATGTCCCTTCTGTCCCCACATTATGTCAATTGGACTCTTCCGTTATCACGGAGAAAACTAGCAAGATACCCGTGCATCCGACTGAAGAGGAGGTTCAAAGTGGGGCGAGAGCAAACCAAGTTGAGAATTCGTCTGGGTTTTTTCAACGCGGTTCAAATGATTTTACTCAAGGAATGGGATACACTAATCCGGTTGACCCGTTTGGGTTTAGGTACCCGGTTCAACTAGTTGGATTTGGATTCCAACAATGA
Protein sequence

>MS.gene069381.t1

MGIQDKDPLAQLSLPPGFRFYPTDEELLVQYLCRKVAGHHFSLQIIAEIDLYKFDPWVLPSKAIFGEKEWYFFSPRDRKYPNGTRPNRVAGSGYWKATGTDKIITNEGRKVGIKKALVFYVGKAPKGTKTNWIMHEYRLLDSSRNNGGTKLDDWVLCRIYKKNSSAQKPIPNGVVSSREYTQYSNGSSSSSSSHLDDVLESLPQIDDHCFKLPRVNSLRTAQHHQQEEKMNLQNLNAANNNFMDWSNSSSILNTVTGFQDGQTQGMMNFSGCNDLYVPSVPTLCQLDSSVITEKTSKIPVHPTEEEVQSGARANQVENSSGFFQRGSNDFTQGMGYTNPVDPFGFRYPVQLVGFGFQQ