AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene069901

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene069901.t1 MTR_2g100500 97.386 459 12 0 1 459 102 560 0.0 938
MS.gene069901.t1 MTR_4g059550 26.133 375 200 11 55 372 277 631 2.19e-17 85.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene069901.t1 AT3G21300 75.546 458 110 1 1 458 98 553 0.0 728
MS.gene069901.t1 AT2G28450 27.653 311 163 10 90 357 319 610 2.25e-18 88.6
MS.gene069901.t1 AT2G28450 27.653 311 163 10 90 357 319 610 2.75e-18 88.2

Find 121 sgRNAs with CRISPR-Local

Find 339 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACAGTGTAAAGCATGTTTA+TGG 0.151368 2.1:+4305747 MS.gene069901:intron
TCAAGTTCCTCTTAAATCTT+AGG 0.161824 2.1:+4306389 MS.gene069901:CDS
AATAAAATTGATGGAAATTT+CGG 0.162241 2.1:+4305861 MS.gene069901:CDS
AGAAAGAGTTTGCTGATATT+TGG 0.173639 2.1:-4305392 None:intergenic
AAACCTGACATTGTTATTTC+AGG 0.189166 2.1:+4305897 MS.gene069901:CDS
TCTCATTTGGTCCATATAAA+TGG 0.212001 2.1:+4303102 MS.gene069901:CDS
TCTTTAGGCAACCATTTATA+TGG 0.223579 2.1:-4303113 None:intergenic
CGACTTAATGCCAAGCTAAA+TGG 0.256646 2.1:+4305804 MS.gene069901:CDS
ATAAAATTGATGGAAATTTC+GGG 0.260144 2.1:+4305862 MS.gene069901:CDS
TATCGAGTGTGTTTGCCTTC+TGG 0.262006 2.1:+4306641 MS.gene069901:CDS
ACAAACTGATCCTGCTAATA+AGG 0.268322 2.1:+4303241 MS.gene069901:CDS
CTTCCCGGTGAGCGTTTCAT+TGG 0.287130 2.1:+4301916 MS.gene069901:CDS
GACGCAGAATTTGGCTTATC+AGG 0.288607 2.1:+4302056 MS.gene069901:CDS
GCACTTGGATTGCATGTTCC+TGG 0.301094 2.1:+4303179 MS.gene069901:CDS
CCTTGTTTCTATAATGAAAC+TGG 0.314926 2.1:-4302967 None:intergenic
ATCAGCTTCATGTGCATCCC+TGG 0.321719 2.1:-4306367 None:intergenic
CTTTCGTGCAGCGATTCTTT+AGG 0.329365 2.1:-4303128 None:intergenic
GAAATAACAATGTCAGGTTT+AGG 0.350429 2.1:-4305894 None:intergenic
GTGTAGATGGAATTCTCATT+TGG 0.359119 2.1:+4303089 MS.gene069901:intron
TGGTTGTAAGACGCAGAATT+TGG 0.377540 2.1:+4302047 MS.gene069901:CDS
CTTTCAAACAAATACTCATC+AGG 0.380438 2.1:+4305413 MS.gene069901:CDS
TACTAGGACCTTCAGCAAAT+CGG 0.389943 2.1:-4304293 None:intergenic
ACTTAAGTACCAACCACTTC+GGG 0.397718 2.1:-4304334 None:intergenic
CTTCAGCAAATCGGGCTTGT+AGG 0.401351 2.1:-4304284 None:intergenic
CATGTGCATCCCTGGGCGGT+TGG 0.403322 2.1:-4306359 None:intergenic
GGGGATCTTAATAAAATTGA+TGG 0.405003 2.1:+4305852 MS.gene069901:CDS
CTGTTGGTAACACATCTGTT+GGG 0.409302 2.1:+4305307 MS.gene069901:CDS
TTGGAATGTAAGCCCTCTTA+AGG 0.412540 2.1:-4305373 None:intergenic
ATGTGCATCCCTGGGCGGTT+GGG 0.427113 2.1:-4306358 None:intergenic
AGCATTACAGAGACCTTAAG+AGG 0.427859 2.1:+4305360 MS.gene069901:CDS
TGGTGCCTGTTCCACAAAAC+AGG 0.428574 2.1:-4305620 None:intergenic
CAGAAAGACTTGGAATTGAA+TGG 0.432456 2.1:+4302914 MS.gene069901:CDS
ATGTGTGACCGTGCACTTCC+CGG 0.435237 2.1:+4301901 MS.gene069901:CDS
GATTAAAGCTAAAGAGGAAC+AGG 0.438005 2.1:+4302083 MS.gene069901:CDS
CAAGTTCCTCTTAAATCTTA+GGG 0.443744 2.1:+4306390 MS.gene069901:CDS
ATTTAGCTTGGCATTAAGTC+GGG 0.446515 2.1:-4305802 None:intergenic
TTCCCGGTGAGCGTTTCATT+GGG 0.451248 2.1:+4301917 MS.gene069901:CDS
TGCTCTAGGGATGTAATGAC+TGG 0.452195 2.1:+4304226 MS.gene069901:intron
ACTAGGACCTTCAGCAAATC+GGG 0.455837 2.1:-4304292 None:intergenic
TAGGCAGAGCTGAATATAGA+AGG 0.458506 2.1:+4306564 MS.gene069901:intron
ATTGAATGGTATTATGAAAC+CGG 0.461268 2.1:+4302928 MS.gene069901:CDS
TAGGTCTGACACTTGCAAAA+AGG 0.462822 2.1:+4305643 MS.gene069901:CDS
ACAAAATGCAACATTTATTG+AGG 0.464324 2.1:+4305830 MS.gene069901:CDS
TGGATATCACAAGGAACAAC+CGG 0.474896 2.1:-4302947 None:intergenic
TTTGTGTGAATGAACATTGT+AGG 0.475932 2.1:-4303452 None:intergenic
GGCGCATCAACAACATCAAA+AGG 0.484191 2.1:-4302000 None:intergenic
GAATTACGCGGAGGCTACTA+AGG 0.485129 2.1:+4301960 MS.gene069901:CDS
CACGAAAGAAATGTTGATGC+TGG 0.489316 2.1:+4303143 MS.gene069901:CDS
CATTTAGCTTGGCATTAAGT+CGG 0.491991 2.1:-4305803 None:intergenic
CAAAATGCAACATTTATTGA+GGG 0.494797 2.1:+4305831 MS.gene069901:CDS
TCTGTTGGTAACACATCTGT+TGG 0.496204 2.1:+4305306 MS.gene069901:CDS
GGCTCAGATTAAAGCTAAAG+AGG 0.496629 2.1:+4302077 MS.gene069901:CDS
ATGCAGAAACTTTATCTACT+AGG 0.496736 2.1:-4304309 None:intergenic
GAACCTGAAATAACAATGTC+AGG 0.501451 2.1:-4305900 None:intergenic
CTCCCAATGAAACGCTCACC+GGG 0.501880 2.1:-4301919 None:intergenic
AGGTCACGTGCACATGTAGC+AGG 0.511360 2.1:-4306442 None:intergenic
TAACACATCTGTTGGGGAGG+AGG 0.517341 2.1:+4305314 MS.gene069901:CDS
TGGGAGGATTACTCGAAAGA+AGG 0.521125 2.1:+4301936 MS.gene069901:CDS
CCGGTGAGCGTTTCATTGGG+AGG 0.523671 2.1:+4301920 MS.gene069901:CDS
AATAATGTAAATACTTCTGT+TGG 0.525332 2.1:+4305291 MS.gene069901:CDS
CGGGCATCTGCGATGGCTTG+AGG 0.525665 2.1:-4305783 None:intergenic
ACATTGCATACCTTATTAGC+AGG 0.525849 2.1:-4303251 None:intergenic
TTGCGGCTATACAAGAATGT+TGG 0.526698 2.1:+4303404 MS.gene069901:CDS
CCAGTTTCATTATAGAAACA+AGG 0.528382 2.1:+4302967 MS.gene069901:CDS
GGGAGGATTACTCGAAAGAA+GGG 0.529171 2.1:+4301937 MS.gene069901:CDS
TGTTGGAGAGATCCACAACT+TGG 0.529697 2.1:+4303421 MS.gene069901:CDS
AGTTTCTGCATTTCCCGAAG+TGG 0.533202 2.1:+4304321 MS.gene069901:CDS
AACTTAAGTACCAACCACTT+CGG 0.533340 2.1:-4304335 None:intergenic
AATACAGATCCCAACCGCCC+AGG 0.534815 2.1:+4306349 MS.gene069901:intron
GGGAGTGAAAATTATGCACT+TGG 0.538441 2.1:+4303164 MS.gene069901:CDS
GAGGAGGAATACACTTTGCA+TGG 0.544319 2.1:+4305330 MS.gene069901:CDS
ATATAAACAGGTCCGTGACT+TGG 0.545107 2.1:+4302868 MS.gene069901:intron
TGTTGGTAACACATCTGTTG+GGG 0.546344 2.1:+4305308 MS.gene069901:CDS
GTGTGTGGGAACATGTCAAC+TGG 0.546603 2.1:-4306612 None:intergenic
ACAAAGTTGACCATTACTTC+AGG 0.548753 2.1:-4304253 None:intergenic
ATACAGATCCCAACCGCCCA+GGG 0.549026 2.1:+4306350 MS.gene069901:intron
AGGCAAACACACTCGATATG+AGG 0.553725 2.1:-4306636 None:intergenic
CTACAAGCCCGATTTGCTGA+AGG 0.558205 2.1:+4304285 MS.gene069901:CDS
GACTGGTCTGCCTGAAGTAA+TGG 0.558686 2.1:+4304243 MS.gene069901:CDS
GAGGAGCCCTAAGATTTAAG+AGG 0.558995 2.1:-4306396 None:intergenic
TTGTGTGAATGAACATTGTA+GGG 0.564703 2.1:-4303451 None:intergenic
ATTAAGTCGGGCATCTGCGA+TGG 0.565964 2.1:-4305790 None:intergenic
CCTCCCAATGAAACGCTCAC+CGG 0.567152 2.1:-4301920 None:intergenic
TCAGCTTCATGTGCATCCCT+GGG 0.572316 2.1:-4306366 None:intergenic
AAGCATTTGATGCTGAGAAG+TGG 0.572814 2.1:+4303484 MS.gene069901:CDS
AAACTCATCGAAGAATGTGC+TGG 0.574226 2.1:+4305564 MS.gene069901:CDS
CAAATCGGGCTTGTAGGAAG+AGG 0.574944 2.1:-4304278 None:intergenic
CACTCGATATGAGGTGTGTG+TGG 0.575250 2.1:-4306627 None:intergenic
ACTTGGTCATACATGTTGGA+AGG 0.576915 2.1:+4302885 MS.gene069901:CDS
TGTGCTGGCATCAGAAGAGA+TGG 0.581417 2.1:+4305579 MS.gene069901:CDS
CGTGACTTGGTCATACATGT+TGG 0.590483 2.1:+4302881 MS.gene069901:CDS
GGAACATGTCAACTGGCTGT+AGG 0.591918 2.1:-4306605 None:intergenic
GACCTTGATTATCTCTGTCA+TGG 0.592498 2.1:+4306460 MS.gene069901:CDS
AAATGCAACATTTATTGAGG+GGG 0.600230 2.1:+4305833 MS.gene069901:CDS
TGATTATCTCTGTCATGGTG+TGG 0.603583 2.1:+4306465 MS.gene069901:CDS
AACGCTCACCGGGAAGTGCA+CGG 0.608647 2.1:-4301909 None:intergenic
AACATCTGAACAGGTTCTTG+CGG 0.610504 2.1:+4303387 MS.gene069901:intron
CAGATCAACAAAGCTCCAGA+AGG 0.620050 2.1:-4306656 None:intergenic
CAATGCGGAACATAAACACA+AGG 0.621712 2.1:-4302021 None:intergenic
AAAATGCAACATTTATTGAG+GGG 0.623055 2.1:+4305832 MS.gene069901:CDS
TACAATGTTCATTCACACAA+AGG 0.623279 2.1:+4303454 MS.gene069901:CDS
CACCATGACAGAGATAATCA+AGG 0.625231 2.1:-4306462 None:intergenic
CTGTTCCACAAAACAGGTCA+AGG 0.628072 2.1:-4305614 None:intergenic
TAGGGTGAGAAACCAAGTTG+TGG 0.632395 2.1:-4303433 None:intergenic
AGGAGGAATACACTTTGCAT+GGG 0.640766 2.1:+4305331 MS.gene069901:CDS
TGGTAACACATCTGTTGGGG+AGG 0.641397 2.1:+4305311 MS.gene069901:CDS
GTTTATGTTCCGCATTGTGG+TGG 0.642868 2.1:+4302027 MS.gene069901:CDS
GCATTACAGAGACCTTAAGA+GGG 0.644303 2.1:+4305361 MS.gene069901:CDS
TGTGTTTATGTTCCGCATTG+TGG 0.644470 2.1:+4302024 MS.gene069901:CDS
ACGAAAGAAATGTTGATGCT+GGG 0.651196 2.1:+4303144 MS.gene069901:CDS
CATGAAACATACACTATGCG+AGG 0.657406 2.1:-4306415 None:intergenic
ATTTGATGCTGAGAAGTGGA+AGG 0.658726 2.1:+4303488 MS.gene069901:CDS
TAATGAAACTGGATATCACA+AGG 0.661138 2.1:-4302956 None:intergenic
GCATCAACAACATCAAAAGG+AGG 0.683556 2.1:-4301997 None:intergenic
GCTTCATGTGCATCCCTGGG+CGG 0.687592 2.1:-4306363 None:intergenic
GGAGGATTACTCGAAAGAAG+GGG 0.687721 2.1:+4301938 MS.gene069901:CDS
CAACATGTATGACCAAGTCA+CGG 0.695459 2.1:-4302880 None:intergenic
ACTCGATATGAGGTGTGTGT+GGG 0.718262 2.1:-4306626 None:intergenic
TCGAAAGAAGGGGAATTACG+CGG 0.719439 2.1:+4301948 MS.gene069901:CDS
GTCTTACAACCACCACAATG+CGG 0.732370 2.1:-4302036 None:intergenic
AAAGAAGGGGAATTACGCGG+AGG 0.735551 2.1:+4301951 MS.gene069901:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CAATTTAAGAAATAAAATAT+GGG - chr2.1:4305482-4305501 None:intergenic 10.0%
!! TCAATTTAAGAAATAAAATA+TGG - chr2.1:4305483-4305502 None:intergenic 10.0%
!! AATAAAATTGATGGAAATTT+CGG + chr2.1:4305861-4305880 MS.gene069901:CDS 15.0%
!! ATTAAACTGTTTATATAAAC+AGG + chr2.1:4302856-4302875 MS.gene069901:intron 15.0%
!! ATTAATATTGATAGAAAACA+AGG - chr2.1:4304196-4304215 None:intergenic 15.0%
!! TAATTAAAATAGAGCAAATA+TGG - chr2.1:4306255-4306274 None:intergenic 15.0%
!! TACAATAATTACATAAAGTT+TGG - chr2.1:4305221-4305240 None:intergenic 15.0%
!! TTAAATAATTTATCCAAACA+AGG + chr2.1:4302697-4302716 MS.gene069901:intron 15.0%
!!! AATATTTAATTTTTGCTCTA+GGG + chr2.1:4304213-4304232 MS.gene069901:intron 15.0%
!!! ATAATTTTATCAAAAAAACC+AGG - chr2.1:4303200-4303219 None:intergenic 15.0%
!!! CTATTAACATTTTAGTTTTA+TGG + chr2.1:4305021-4305040 MS.gene069901:intron 15.0%
!!! TAATATTTAATTTTTGCTCT+AGG + chr2.1:4304212-4304231 MS.gene069901:intron 15.0%
!!! TCAAATTTAATTTCTATACA+AGG + chr2.1:4304593-4304612 MS.gene069901:intron 15.0%
!!! TTATTTATTTCTTTAATGGA+GGG + chr2.1:4306154-4306173 MS.gene069901:intron 15.0%
!!! TTCGTTATTTATTTCTTTAA+TGG + chr2.1:4306150-4306169 MS.gene069901:intron 15.0%
!! AATAATGTAAATACTTCTGT+TGG + chr2.1:4305291-4305310 MS.gene069901:CDS 20.0%
!! AATATAGCAATAGAATAAGT+AGG - chr2.1:4305947-4305966 None:intergenic 20.0%
!! AATTTCTATACAAGGTTAAA+TGG + chr2.1:4304601-4304620 MS.gene069901:intron 20.0%
!! ATAAAATTGATGGAAATTTC+GGG + chr2.1:4305862-4305881 MS.gene069901:CDS 20.0%
!! ATACCAATATTTCATTTGAA+GGG + chr2.1:4304168-4304187 MS.gene069901:intron 20.0%
!! ATATGAAATCAAATAAGTGT+AGG - chr2.1:4303323-4303342 None:intergenic 20.0%
!! ATTTCTATACAAGGTTAAAT+GGG + chr2.1:4304602-4304621 MS.gene069901:intron 20.0%
!! CATGGAAAACTTATATAAAT+AGG - chr2.1:4302723-4302742 None:intergenic 20.0%
!! TAAATTTGATCGTAAAGAAT+GGG - chr2.1:4304582-4304601 None:intergenic 20.0%
!! TTAAATTTGATCGTAAAGAA+TGG - chr2.1:4304583-4304602 None:intergenic 20.0%
!!! AACATTTTAGTTTTATGGAT+GGG + chr2.1:4305026-4305045 MS.gene069901:intron 20.0%
!!! ACATTGATTTTAAATTGGTA+TGG + chr2.1:4303953-4303972 MS.gene069901:intron 20.0%
!!! CTCAAACATTGATTTTAAAT+TGG + chr2.1:4303948-4303967 MS.gene069901:intron 20.0%
!!! GTTATTTATTTCTTTAATGG+AGG + chr2.1:4306153-4306172 MS.gene069901:intron 20.0%
!!! TAACATTTTAGTTTTATGGA+TGG + chr2.1:4305025-4305044 MS.gene069901:intron 20.0%
!!! TATGGAGTTTATTTTAACTT+GGG + chr2.1:4303971-4303990 MS.gene069901:intron 20.0%
!!! TATTTGATCAGAAGTATATA+TGG + chr2.1:4305998-4306017 MS.gene069901:intron 20.0%
!!! TCATTTGGTTTTAGTATATT+AGG + chr2.1:4305679-4305698 MS.gene069901:intron 20.0%
!!! TTACAATATGCCAATTTTTT+TGG + chr2.1:4305437-4305456 MS.gene069901:intron 20.0%
! AAAATGCAACATTTATTGAG+GGG + chr2.1:4305832-4305851 MS.gene069901:CDS 25.0%
! AAACAGAAATTACAGGTTTA+AGG - chr2.1:4304435-4304454 None:intergenic 25.0%
! AAATACTGCTTATAAGTGAT+CGG - chr2.1:4303657-4303676 None:intergenic 25.0%
! AACAGAAATTACAGGTTTAA+GGG - chr2.1:4304434-4304453 None:intergenic 25.0%
! ACAAAATGCAACATTTATTG+AGG + chr2.1:4305830-4305849 MS.gene069901:CDS 25.0%
! ACATGTTTAATTGTGATCTT+CGG - chr2.1:4306312-4306331 None:intergenic 25.0%
! AGAGTCTATCATATATATGT+TGG - chr2.1:4303783-4303802 None:intergenic 25.0%
! AGTTTGGAAACAAGTTAAAA+AGG - chr2.1:4305205-4305224 None:intergenic 25.0%
! ATGAGATCTCTTACATAATA+AGG - chr2.1:4304993-4305012 None:intergenic 25.0%
! ATTGAATGGTATTATGAAAC+CGG + chr2.1:4302928-4302947 MS.gene069901:CDS 25.0%
! ATTTGTTTGAGCTTATCTAA+TGG + chr2.1:4302477-4302496 MS.gene069901:intron 25.0%
! CAAAATGCAACATTTATTGA+GGG + chr2.1:4305831-4305850 MS.gene069901:CDS 25.0%
! CAAATAGACAGATATTGTTA+AGG - chr2.1:4304742-4304761 None:intergenic 25.0%
! CAATAGAATAAGTAGGAATA+TGG - chr2.1:4305940-4305959 None:intergenic 25.0%
! CAATTAAACATGTTGTCATT+TGG + chr2.1:4306319-4306338 MS.gene069901:intron 25.0%
! CAGCTAACATTCAAATAAAT+GGG - chr2.1:4306084-4306103 None:intergenic 25.0%
! CATACCAATATTTCATTTGA+AGG + chr2.1:4304167-4304186 MS.gene069901:intron 25.0%
! CGTTTATTGAGCTTATTTAT+TGG + chr2.1:4302136-4302155 MS.gene069901:intron 25.0%
! GAGTCTATCATATATATGTT+GGG - chr2.1:4303782-4303801 None:intergenic 25.0%
! GAGTTTATAAAATCAGCTTA+TGG + chr2.1:4302408-4302427 MS.gene069901:intron 25.0%
! TAACATTCAAATAAATGGGT+TGG - chr2.1:4306080-4306099 None:intergenic 25.0%
! TAAGAAATAAAATATGGGAC+AGG - chr2.1:4305477-4305496 None:intergenic 25.0%
! TAGATTTCAAAGTATATCCT+GGG + chr2.1:4304771-4304790 MS.gene069901:intron 25.0%
! TCAGCTAACATTCAAATAAA+TGG - chr2.1:4306085-4306104 None:intergenic 25.0%
! TTGATTTCATATTCACAACT+GGG + chr2.1:4303331-4303350 MS.gene069901:intron 25.0%
! TTTGTTTGAGCTTATCTAAT+GGG + chr2.1:4302478-4302497 MS.gene069901:intron 25.0%
!! AACATTCAAATAAATGGGTT+GGG - chr2.1:4306079-4306098 None:intergenic 25.0%
!! ACCTTAAAATTTGAAATCTG+AGG - chr2.1:4304838-4304857 None:intergenic 25.0%
!! CAAATATGGTTTTCTTTACA+TGG - chr2.1:4306241-4306260 None:intergenic 25.0%
!! CATATTTTATGAAGTTTCGT+TGG - chr2.1:4304100-4304119 None:intergenic 25.0%
!! CCTTAAAATTTGAAATCTGA+GGG - chr2.1:4304837-4304856 None:intergenic 25.0%
!! TTTGATTTCATATTCACAAC+TGG + chr2.1:4303330-4303349 MS.gene069901:intron 25.0%
!!! AAAAAGCATCAAATTCAAAG+GGG + chr2.1:4304141-4304160 MS.gene069901:intron 25.0%
!!! AAATTTTAAGGTATACCAAG+GGG + chr2.1:4304846-4304865 MS.gene069901:intron 25.0%
!!! AGGATATACTTTGAAATCTA+CGG - chr2.1:4304771-4304790 None:intergenic 25.0%
!!! CAAATTTTAAGGTATACCAA+GGG + chr2.1:4304845-4304864 MS.gene069901:intron 25.0%
!!! GAAAAAGCATCAAATTCAAA+GGG + chr2.1:4304140-4304159 MS.gene069901:intron 25.0%
!!! GTATGGAGTTTATTTTAACT+TGG + chr2.1:4303970-4303989 MS.gene069901:intron 25.0%
!!! GTGGTTTTGTAAGTTTATTT+AGG - chr2.1:4303616-4303635 None:intergenic 25.0%
!!! TAAGTTGTTGTTTTAGCTTA+TGG + chr2.1:4302295-4302314 MS.gene069901:intron 25.0%
!!! TCAAATTTTAAGGTATACCA+AGG + chr2.1:4304844-4304863 MS.gene069901:intron 25.0%
!!! TGAAAAAGCATCAAATTCAA+AGG + chr2.1:4304139-4304158 MS.gene069901:intron 25.0%
!!! TTATATAAATAGGCCTTGTT+TGG - chr2.1:4302713-4302732 None:intergenic 25.0%
!!! TTTGAATTTGATGCTTTTTC+AGG - chr2.1:4304140-4304159 None:intergenic 25.0%
AAAGACAGAGCCAAAAAAAT+TGG - chr2.1:4305450-4305469 None:intergenic 30.0%
AAATGCAACATTTATTGAGG+GGG + chr2.1:4305833-4305852 MS.gene069901:CDS 30.0%
AACAGTGTAAAGCATGTTTA+TGG + chr2.1:4305747-4305766 MS.gene069901:intron 30.0%
AAGTAGGAATATGGAAATGT+AGG - chr2.1:4305931-4305950 None:intergenic 30.0%
AATAAAGTGACAACGTATGA+GGG - chr2.1:4305136-4305155 None:intergenic 30.0%
ACAGAAATTACAGGTTTAAG+GGG - chr2.1:4304433-4304452 None:intergenic 30.0%
ACTTACAAAACCACCTTATA+AGG + chr2.1:4303622-4303641 MS.gene069901:intron 30.0%
ATACAAAACTTCTGCCTAAT+AGG - chr2.1:4305544-4305563 None:intergenic 30.0%
ATGCAGAAACTTTATCTACT+AGG - chr2.1:4304312-4304331 None:intergenic 30.0%
CAAGTTCCTCTTAAATCTTA+GGG + chr2.1:4306390-4306409 MS.gene069901:CDS 30.0%
CAATGGCAATTTCAACAATT+AGG - chr2.1:4306035-4306054 None:intergenic 30.0%
CCAGTTTCATTATAGAAACA+AGG + chr2.1:4302967-4302986 MS.gene069901:CDS 30.0%
CTCAAACAAATCAATCCAAA+TGG - chr2.1:4302468-4302487 None:intergenic 30.0%
CTTTCAAACAAATACTCATC+AGG + chr2.1:4305413-4305432 MS.gene069901:CDS 30.0%
GATGTTCAAGACAAAACATA+AGG - chr2.1:4303373-4303392 None:intergenic 30.0%
GCAATTTCAACAATTAGGAT+AGG - chr2.1:4306030-4306049 None:intergenic 30.0%
GGGGATCTTAATAAAATTGA+TGG + chr2.1:4305852-4305871 MS.gene069901:CDS 30.0%
GTACCCTTCAAATGAAATAT+TGG - chr2.1:4304174-4304193 None:intergenic 30.0%
GTAGATTTCAAAGTATATCC+TGG + chr2.1:4304770-4304789 MS.gene069901:intron 30.0%
GTCAATCAAACTAACAGATT+CGG - chr2.1:4304815-4304834 None:intergenic 30.0%
GTTTGAATAGTGATAGTAAG+TGG - chr2.1:4303887-4303906 None:intergenic 30.0%
TAAAAGCTTAAGATGTTACG+AGG - chr2.1:4304708-4304727 None:intergenic 30.0%
TAACATCCCACTTCTAAATA+GGG + chr2.1:4304879-4304898 MS.gene069901:intron 30.0%
TAATGAAACTGGATATCACA+AGG - chr2.1:4302959-4302978 None:intergenic 30.0%
TACAAAACTTCTGCCTAATA+GGG - chr2.1:4305543-4305562 None:intergenic 30.0%
TACAATGTTCATTCACACAA+AGG + chr2.1:4303454-4303473 MS.gene069901:CDS 30.0%
TATGAAGTTTCGTTGGAATT+TGG - chr2.1:4304093-4304112 None:intergenic 30.0%
TCAACAGAAACAGAAATTAC+AGG - chr2.1:4304442-4304461 None:intergenic 30.0%
TCAAGTTCCTCTTAAATCTT+AGG + chr2.1:4306389-4306408 MS.gene069901:CDS 30.0%
TCAATCAAACTAACAGATTC+GGG - chr2.1:4304814-4304833 None:intergenic 30.0%
TCTCATTTGGTCCATATAAA+TGG + chr2.1:4303102-4303121 MS.gene069901:CDS 30.0%
TCTTTAGGCAACCATTTATA+TGG - chr2.1:4303116-4303135 None:intergenic 30.0%
TGAGTGAATTATGATGTGTT+TGG + chr2.1:4302110-4302129 MS.gene069901:intron 30.0%
TGCTTTACACTGTTCAAAAT+TGG - chr2.1:4305741-4305760 None:intergenic 30.0%
TGTTTACTTTCTTGTGTAGA+TGG + chr2.1:4303076-4303095 MS.gene069901:intron 30.0%
TTGTGTGAATGAACATTGTA+GGG - chr2.1:4303454-4303473 None:intergenic 30.0%
TTTGTGTGAATGAACATTGT+AGG - chr2.1:4303455-4303474 None:intergenic 30.0%
! CCCTCAGATTTCAAATTTTA+AGG + chr2.1:4304834-4304853 MS.gene069901:intron 30.0%
! GGTATGCTTTTATCTTCATT+TGG + chr2.1:4305664-4305683 MS.gene069901:intron 30.0%
! TAAGCAAGATTTTCCCTATT+AGG + chr2.1:4305527-4305546 MS.gene069901:intron 30.0%
! TCGTAACATCTTAAGCTTTT+AGG + chr2.1:4304707-4304726 MS.gene069901:intron 30.0%
! TGCTTACATTTCTTTTCTGA+TGG - chr2.1:4305513-4305532 None:intergenic 30.0%
!! AGAAAGAGTTTGCTGATATT+TGG - chr2.1:4305395-4305414 None:intergenic 30.0%
!! ATTTTGTATGCCATTTAGCT+TGG - chr2.1:4305817-4305836 None:intergenic 30.0%
!! CCTTGTTTCTATAATGAAAC+TGG - chr2.1:4302970-4302989 None:intergenic 30.0%
!! GGATATACTTTGAAATCTAC+GGG - chr2.1:4304770-4304789 None:intergenic 30.0%
!! GTAATTTCTGTTTCTGTTGA+AGG + chr2.1:4304442-4304461 MS.gene069901:intron 30.0%
!! TTCCTTGTCTTACTTGTTTT+GGG + chr2.1:4303531-4303550 MS.gene069901:intron 30.0%
!!! GTTTATTTTAACTTGGGCAA+AGG + chr2.1:4303977-4303996 MS.gene069901:intron 30.0%
!!! TCTTAAGCTTTTAGGATAGT+TGG + chr2.1:4304715-4304734 MS.gene069901:intron 30.0%
AACCATATCACTATGCAATG+TGG + chr2.1:4303904-4303923 MS.gene069901:intron 35.0%
AACTACAACTTGTGCTATCA+TGG - chr2.1:4302741-4302760 None:intergenic 35.0%
AACTTAAGTACCAACCACTT+CGG - chr2.1:4304338-4304357 None:intergenic 35.0%
AAGCCATCTTGGAAAACTTA+AGG - chr2.1:4302566-4302585 None:intergenic 35.0%
ACAAAACCACCTTATAAGGT+GGG + chr2.1:4303626-4303645 MS.gene069901:intron 35.0%
ACAAACTGATCCTGCTAATA+AGG + chr2.1:4303241-4303260 MS.gene069901:CDS 35.0%
ACAAAGTTGACCATTACTTC+AGG - chr2.1:4304256-4304275 None:intergenic 35.0%
ACATATGAAGAAGCTAAAGC+AGG - chr2.1:4304388-4304407 None:intergenic 35.0%
ACATTGCATACCTTATTAGC+AGG - chr2.1:4303254-4303273 None:intergenic 35.0%
ACCATATCACTATGCAATGT+GGG + chr2.1:4303905-4303924 MS.gene069901:intron 35.0%
ACGAAAGAAATGTTGATGCT+GGG + chr2.1:4303144-4303163 MS.gene069901:CDS 35.0%
AGTTCTTGCATCTATATTCG+TGG + chr2.1:4303570-4303589 MS.gene069901:intron 35.0%
AGTTGATCTTAACACTGTAG+TGG + chr2.1:4304515-4304534 MS.gene069901:intron 35.0%
AGTTTCATTGATCAAGTGTC+AGG + chr2.1:4304538-4304557 MS.gene069901:intron 35.0%
ATTCGTGGACCATAGAATTT+GGG + chr2.1:4303585-4303604 MS.gene069901:intron 35.0%
ATTTCATATTCACAACTGGG+AGG + chr2.1:4303334-4303353 MS.gene069901:intron 35.0%
CAAAAAAGCTATAGCCCATA+GGG + chr2.1:4304650-4304669 MS.gene069901:intron 35.0%
CAGAAAGACTTGGAATTGAA+TGG + chr2.1:4302914-4302933 MS.gene069901:CDS 35.0%
CCTATGTCACGAACTATAAA+GGG - chr2.1:4302324-4302343 None:intergenic 35.0%
CTAAATGACATGAAGCTATG+TGG + chr2.1:4304677-4304696 MS.gene069901:intron 35.0%
GAATAAAGTGACAACGTATG+AGG - chr2.1:4305137-4305156 None:intergenic 35.0%
GAATAGTGATAGTAAGTGGT+GGG - chr2.1:4303883-4303902 None:intergenic 35.0%
GATTAAAGCTAAAGAGGAAC+AGG + chr2.1:4302083-4302102 MS.gene069901:CDS 35.0%
GTAACATCCCACTTCTAAAT+AGG + chr2.1:4304878-4304897 MS.gene069901:intron 35.0%
GTGTAGATGGAATTCTCATT+TGG + chr2.1:4303089-4303108 MS.gene069901:intron 35.0%
TAAGTGTTTGTGACACTGTT+TGG + chr2.1:4302501-4302520 MS.gene069901:intron 35.0%
TACAAAACCACCTTATAAGG+TGG + chr2.1:4303625-4303644 MS.gene069901:intron 35.0%
TACCCAAAACAAGTAAGACA+AGG - chr2.1:4303536-4303555 None:intergenic 35.0%
TATCTGCATAAGCACTTCTA+AGG + chr2.1:4302375-4302394 MS.gene069901:intron 35.0%
TATTCGTGGACCATAGAATT+TGG + chr2.1:4303584-4303603 MS.gene069901:intron 35.0%
TCAACTATCTGAGTTGTTGA+AGG + chr2.1:4306534-4306553 MS.gene069901:intron 35.0%
TCCTATGTCACGAACTATAA+AGG - chr2.1:4302325-4302344 None:intergenic 35.0%
TCGTAAAGAATGGGTGTAAA+AGG - chr2.1:4304573-4304592 None:intergenic 35.0%
TGAATAGTGATAGTAAGTGG+TGG - chr2.1:4303884-4303903 None:intergenic 35.0%
TTAAGGGGTTTCGAAAGTTA+AGG - chr2.1:4304418-4304437 None:intergenic 35.0%
TTCAAAGTATATCCTGGGAA+TGG + chr2.1:4304776-4304795 MS.gene069901:intron 35.0%
TTTGTCTTGAACATCTGAAC+AGG + chr2.1:4303378-4303397 MS.gene069901:intron 35.0%
! AAGGTTTTCTCAGAAAGACT+TGG + chr2.1:4302904-4302923 MS.gene069901:CDS 35.0%
! ATCAATGTTTGAGCCTTATC+CGG - chr2.1:4303941-4303960 None:intergenic 35.0%
! ATGTCATTTAGACAACCCTA+TGG - chr2.1:4304668-4304687 None:intergenic 35.0%
! GTTCCTTGTCTTACTTGTTT+TGG + chr2.1:4303530-4303549 MS.gene069901:intron 35.0%
! TAGTTTGTCTAGAAAACGCT+TGG + chr2.1:4304946-4304965 MS.gene069901:intron 35.0%
! TCTCATGCAAATGCATCTTT+TGG + chr2.1:4303028-4303047 MS.gene069901:intron 35.0%
! TGTCATTTAGACAACCCTAT+GGG - chr2.1:4304667-4304686 None:intergenic 35.0%
! TTTAATGGAGGGAGATTTTC+TGG + chr2.1:4306165-4306184 MS.gene069901:intron 35.0%
!! AGCTTAAGTTGATGAATGCA+AGG - chr2.1:4304488-4304507 None:intergenic 35.0%
!! AGTTGTTGAAGGTTTTGTGT+AGG + chr2.1:4306545-4306564 MS.gene069901:intron 35.0%
!! ATTCAAATAAATGGGTTGGG+TGG - chr2.1:4306076-4306095 None:intergenic 35.0%
!! ATTTAGCTTGGCATTAAGTC+GGG - chr2.1:4305805-4305824 None:intergenic 35.0%
!! CATTTAGCTTGGCATTAAGT+CGG - chr2.1:4305806-4305825 None:intergenic 35.0%
!! GTTGTTTTCATAAGCCATCT+TGG - chr2.1:4302577-4302596 None:intergenic 35.0%
!! TTCAAATAAATGGGTTGGGT+GGG - chr2.1:4306075-4306094 None:intergenic 35.0%
!!! TTACTTGTTTTGGGTACACA+TGG + chr2.1:4303540-4303559 MS.gene069901:intron 35.0%
AAACTCATCGAAGAATGTGC+TGG + chr2.1:4305564-4305583 MS.gene069901:CDS 40.0%
AACATCTGAACAGGTTCTTG+CGG + chr2.1:4303387-4303406 MS.gene069901:intron 40.0%
AAGCATTTGATGCTGAGAAG+TGG + chr2.1:4303484-4303503 MS.gene069901:CDS 40.0%
ACCTATCATTCATGCAGAGA+AGG - chr2.1:4305261-4305280 None:intergenic 40.0%
ACTTAAGTACCAACCACTTC+GGG - chr2.1:4304337-4304356 None:intergenic 40.0%
ACTTGGTCATACATGTTGGA+AGG + chr2.1:4302885-4302904 MS.gene069901:CDS 40.0%
AGCATTACAGAGACCTTAAG+AGG + chr2.1:4305360-4305379 MS.gene069901:CDS 40.0%
AGGAGGAATACACTTTGCAT+GGG + chr2.1:4305331-4305350 MS.gene069901:CDS 40.0%
ATATAAACAGGTCCGTGACT+TGG + chr2.1:4302868-4302887 MS.gene069901:intron 40.0%
ATCCCACTTCTAAATAGGGA+GGG + chr2.1:4304883-4304902 MS.gene069901:intron 40.0%
ATTTGATGCTGAGAAGTGGA+AGG + chr2.1:4303488-4303507 MS.gene069901:CDS 40.0%
CAACATGTATGACCAAGTCA+CGG - chr2.1:4302883-4302902 None:intergenic 40.0%
CAATGCGGAACATAAACACA+AGG - chr2.1:4302024-4302043 None:intergenic 40.0%
CACACAAAAAGAGACAGTTG+GGG - chr2.1:4305169-4305188 None:intergenic 40.0%
CACCATGACAGAGATAATCA+AGG - chr2.1:4306465-4306484 None:intergenic 40.0%
CACGAAAGAAATGTTGATGC+TGG + chr2.1:4303143-4303162 MS.gene069901:CDS 40.0%
CATGAAACATACACTATGCG+AGG - chr2.1:4306418-4306437 None:intergenic 40.0%
CATGCAGAGAAGGAATTTAC+TGG - chr2.1:4305251-4305270 None:intergenic 40.0%
CCAAAAAAGCTATAGCCCAT+AGG + chr2.1:4304649-4304668 MS.gene069901:intron 40.0%
CCATATCACTATGCAATGTG+GGG + chr2.1:4303906-4303925 MS.gene069901:intron 40.0%
CCCTTTATAGTTCGTGACAT+AGG + chr2.1:4302321-4302340 MS.gene069901:intron 40.0%
CGACTTAATGCCAAGCTAAA+TGG + chr2.1:4305804-4305823 MS.gene069901:CDS 40.0%
GACCTTGATTATCTCTGTCA+TGG + chr2.1:4306460-4306479 MS.gene069901:CDS 40.0%
GCACACAAAAAGAGACAGTT+GGG - chr2.1:4305170-4305189 None:intergenic 40.0%
GCATCAACAACATCAAAAGG+AGG - chr2.1:4302000-4302019 None:intergenic 40.0%
GCATTACAGAGACCTTAAGA+GGG + chr2.1:4305361-4305380 MS.gene069901:CDS 40.0%
GGCTCAGATTAAAGCTAAAG+AGG + chr2.1:4302077-4302096 MS.gene069901:CDS 40.0%
GGGAAAGAAGTGAACAACAA+TGG - chr2.1:4306052-4306071 None:intergenic 40.0%
GGGAGTGAAAATTATGCACT+TGG + chr2.1:4303164-4303183 MS.gene069901:CDS 40.0%
TAACAGATTCGGGATGTTAC+AGG - chr2.1:4304804-4304823 None:intergenic 40.0%
TACTAGGACCTTCAGCAAAT+CGG - chr2.1:4304296-4304315 None:intergenic 40.0%
TAGGCAGAGCTGAATATAGA+AGG + chr2.1:4306564-4306583 MS.gene069901:intron 40.0%
TAGGTCTGACACTTGCAAAA+AGG + chr2.1:4305643-4305662 MS.gene069901:CDS 40.0%
TCCTTCTCTGCATGAATGAT+AGG + chr2.1:4305257-4305276 MS.gene069901:intron 40.0%
TCGCACATTGGATAGTGATA+TGG - chr2.1:4303683-4303702 None:intergenic 40.0%
TGACCTAGGTGACTCAATTA+CGG + chr2.1:4303752-4303771 MS.gene069901:intron 40.0%
TGATTATCTCTGTCATGGTG+TGG + chr2.1:4306465-4306484 MS.gene069901:CDS 40.0%
TGGATATCACAAGGAACAAC+CGG - chr2.1:4302950-4302969 None:intergenic 40.0%
TGGTTGTAAGACGCAGAATT+TGG + chr2.1:4302047-4302066 MS.gene069901:CDS 40.0%
TGTGTTTATGTTCCGCATTG+TGG + chr2.1:4302024-4302043 MS.gene069901:CDS 40.0%
TTGCGGCTATACAAGAATGT+TGG + chr2.1:4303404-4303423 MS.gene069901:CDS 40.0%
TTGGAATGTAAGCCCTCTTA+AGG - chr2.1:4305376-4305395 None:intergenic 40.0%
TTTATGGATGGGTGAACTTC+AGG + chr2.1:4305037-4305056 MS.gene069901:intron 40.0%
TTTCAGCTTATGGGTCCATT+TGG + chr2.1:4302450-4302469 MS.gene069901:intron 40.0%
! AAAGCTGGCTTATATGGTGA+TGG + chr2.1:4303854-4303873 MS.gene069901:intron 40.0%
! GCTCCTTAAGTTTTCCAAGA+TGG + chr2.1:4302560-4302579 MS.gene069901:intron 40.0%
! TATAGCATAAGAGCGCATCA+TGG - chr2.1:4302668-4302687 None:intergenic 40.0%
! TTTAAGGTATACCAAGGGGA+TGG + chr2.1:4304850-4304869 MS.gene069901:intron 40.0%
! TTTTGCAAGTGTCAGACCTA+TGG - chr2.1:4305643-4305662 None:intergenic 40.0%
!! CTGTTGGTAACACATCTGTT+GGG + chr2.1:4305307-4305326 MS.gene069901:CDS 40.0%
!! TCAAATAAATGGGTTGGGTG+GGG - chr2.1:4306074-4306093 None:intergenic 40.0%
!! TCTGTTGGTAACACATCTGT+TGG + chr2.1:4305306-4305325 MS.gene069901:CDS 40.0%
!! TGTTGGTAACACATCTGTTG+GGG + chr2.1:4305308-4305327 MS.gene069901:CDS 40.0%
!! TTTAACTTGGGCAAAGGTGT+GGG + chr2.1:4303983-4304002 MS.gene069901:intron 40.0%
!!! AAGCTGCTGTTTTCAGCTTA+TGG + chr2.1:4302440-4302459 MS.gene069901:intron 40.0%
!!! AGCTGCTGTTTTCAGCTTAT+GGG + chr2.1:4302441-4302460 MS.gene069901:intron 40.0%
!!! CCTATGGGCTATAGCTTTTT+TGG - chr2.1:4304652-4304671 None:intergenic 40.0%
!!! TTTTAACTTGGGCAAAGGTG+TGG + chr2.1:4303982-4304001 MS.gene069901:intron 40.0%
ACTAGGACCTTCAGCAAATC+GGG - chr2.1:4304295-4304314 None:intergenic 45.0%
ACTCGATATGAGGTGTGTGT+GGG - chr2.1:4306629-4306648 None:intergenic 45.0%
ACTTCTAAATAGGGAGGGGA+TGG + chr2.1:4304888-4304907 MS.gene069901:intron 45.0%
AGGCAAACACACTCGATATG+AGG - chr2.1:4306639-4306658 None:intergenic 45.0%
AGTTTCTGCATTTCCCGAAG+TGG + chr2.1:4304321-4304340 MS.gene069901:CDS 45.0%
ATCCCCTCCCTATTTAGAAG+TGG - chr2.1:4304889-4304908 None:intergenic 45.0%
ATGTTACAGGATCCATTCCC+AGG - chr2.1:4304791-4304810 None:intergenic 45.0%
CATCCCACTTCTAAATAGGG+AGG + chr2.1:4304882-4304901 MS.gene069901:intron 45.0%
CCCCACATTGCATAGTGATA+TGG - chr2.1:4303909-4303928 None:intergenic 45.0%
CGCACACAAAAAGAGACAGT+TGG - chr2.1:4305171-4305190 None:intergenic 45.0%
CTGTTCCACAAAACAGGTCA+AGG - chr2.1:4305617-4305636 None:intergenic 45.0%
CTTTCGTGCAGCGATTCTTT+AGG - chr2.1:4303131-4303150 None:intergenic 45.0%
GACCTAGGTGACTCAATTAC+GGG + chr2.1:4303753-4303772 MS.gene069901:intron 45.0%
GAGGAGCCCTAAGATTTAAG+AGG - chr2.1:4306399-4306418 None:intergenic 45.0%
GAGGAGGAATACACTTTGCA+TGG + chr2.1:4305330-4305349 MS.gene069901:CDS 45.0%
GCATTTCCCACCTTATAAGG+TGG - chr2.1:4303635-4303654 None:intergenic 45.0%
GGAGGATTACTCGAAAGAAG+GGG + chr2.1:4301938-4301957 MS.gene069901:CDS 45.0%
GGCGCATCAACAACATCAAA+AGG - chr2.1:4302003-4302022 None:intergenic 45.0%
GGGAGGATTACTCGAAAGAA+GGG + chr2.1:4301937-4301956 MS.gene069901:CDS 45.0%
GTCTTACAACCACCACAATG+CGG - chr2.1:4302039-4302058 None:intergenic 45.0%
GTGTTTGTGACACTGTTTGG+AGG + chr2.1:4302504-4302523 MS.gene069901:intron 45.0%
GTTTATGTTCCGCATTGTGG+TGG + chr2.1:4302027-4302046 MS.gene069901:CDS 45.0%
TAGGCTCGACCCAAATTCTA+TGG - chr2.1:4303597-4303616 None:intergenic 45.0%
TAGGGTGAGAAACCAAGTTG+TGG - chr2.1:4303436-4303455 None:intergenic 45.0%
TATCGAGTGTGTTTGCCTTC+TGG + chr2.1:4306641-4306660 MS.gene069901:CDS 45.0%
TCCCACTTCTAAATAGGGAG+GGG + chr2.1:4304884-4304903 MS.gene069901:intron 45.0%
TCCCCTCCCTATTTAGAAGT+GGG - chr2.1:4304888-4304907 None:intergenic 45.0%
TCGAAAGAAGGGGAATTACG+CGG + chr2.1:4301948-4301967 MS.gene069901:CDS 45.0%
TCGGCATTTCCCACCTTATA+AGG - chr2.1:4303638-4303657 None:intergenic 45.0%
TGGGAGGATTACTCGAAAGA+AGG + chr2.1:4301936-4301955 MS.gene069901:CDS 45.0%
TGTTACAGAATCCATCCCCT+TGG - chr2.1:4304864-4304883 None:intergenic 45.0%
TGTTGGAGAGATCCACAACT+TGG + chr2.1:4303421-4303440 MS.gene069901:CDS 45.0%
TTCGTGACATAGGACATGCT+TGG + chr2.1:4302331-4302350 MS.gene069901:intron 45.0%
! ACTGTCTCTTTTTGTGTGCG+TGG + chr2.1:4305171-4305190 MS.gene069901:intron 45.0%
! CCATATAAGCCAGCTTTGTG+CGG - chr2.1:4303851-4303870 None:intergenic 45.0%
! CTTGACCTGTTTTGTGGAAC+AGG + chr2.1:4305615-4305634 MS.gene069901:CDS 45.0%
! GACGCAGAATTTGGCTTATC+AGG + chr2.1:4302056-4302075 MS.gene069901:CDS 45.0%
! GTTGTCCTTGACCTGTTTTG+TGG + chr2.1:4305609-4305628 MS.gene069901:CDS 45.0%
! TTTGAGCCTTATCCGGTGTA+TGG - chr2.1:4303934-4303953 None:intergenic 45.0%
! TTTTGTGGAACAGGCACCAT+AGG + chr2.1:4305624-4305643 MS.gene069901:CDS 45.0%
!! AAATAAATGGGTTGGGTGGG+GGG - chr2.1:4306072-4306091 None:intergenic 45.0%
!! CAAATAAATGGGTTGGGTGG+GGG - chr2.1:4306073-4306092 None:intergenic 45.0%
!! CGTGACTTGGTCATACATGT+TGG + chr2.1:4302881-4302900 MS.gene069901:CDS 45.0%
!! GCACTTCTAAGGCTGTATGA+TGG + chr2.1:4302386-4302405 MS.gene069901:intron 45.0%
!! TGCTCTAGGGATGTAATGAC+TGG + chr2.1:4304226-4304245 MS.gene069901:intron 45.0%
!!! AGCTTTTTTGGCTTGGAGCA+TGG - chr2.1:4304640-4304659 None:intergenic 45.0%
!!! GGGCTATAGCTTTTTTGGCT+TGG - chr2.1:4304647-4304666 None:intergenic 45.0%
!!! TTTTTTGGCTTGGAGCATGG+AGG - chr2.1:4304637-4304656 None:intergenic 45.0%
AAAGAAGGGGAATTACGCGG+AGG + chr2.1:4301951-4301970 MS.gene069901:CDS 50.0%
ATCAGCTTCATGTGCATCCC+TGG - chr2.1:4306370-4306389 None:intergenic 50.0%
ATTAAGTCGGGCATCTGCGA+TGG - chr2.1:4305793-4305812 None:intergenic 50.0%
CAAATCGGGCTTGTAGGAAG+AGG - chr2.1:4304281-4304300 None:intergenic 50.0%
CAATGTGGGGTTCCATACAC+CGG + chr2.1:4303919-4303938 MS.gene069901:intron 50.0%
CACCCGTAATTGAGTCACCT+AGG - chr2.1:4303758-4303777 None:intergenic 50.0%
CACTCGATATGAGGTGTGTG+TGG - chr2.1:4306630-4306649 None:intergenic 50.0%
CTAACTCAACCGCACAAAGC+TGG + chr2.1:4303839-4303858 MS.gene069901:intron 50.0%
CTTCAGCAAATCGGGCTTGT+AGG - chr2.1:4304287-4304306 None:intergenic 50.0%
GAATTACGCGGAGGCTACTA+AGG + chr2.1:4301960-4301979 MS.gene069901:CDS 50.0%
GCACTTGGATTGCATGTTCC+TGG + chr2.1:4303179-4303198 MS.gene069901:CDS 50.0%
GGAACATGTCAACTGGCTGT+AGG - chr2.1:4306608-4306627 None:intergenic 50.0%
GTGCGGTTGAGTTAGGCATT+AGG - chr2.1:4303834-4303853 None:intergenic 50.0%
GTGTGTGGGAACATGTCAAC+TGG - chr2.1:4306615-4306634 None:intergenic 50.0%
TAACACATCTGTTGGGGAGG+AGG + chr2.1:4305314-4305333 MS.gene069901:CDS 50.0%
TCAGCTTCATGTGCATCCCT+GGG - chr2.1:4306369-4306388 None:intergenic 50.0%
TCTGCATTTCCCGAAGTGGT+TGG + chr2.1:4304325-4304344 MS.gene069901:intron 50.0%
TGGTAACACATCTGTTGGGG+AGG + chr2.1:4305311-4305330 MS.gene069901:CDS 50.0%
TGGTGCCTGTTCCACAAAAC+AGG - chr2.1:4305623-4305642 None:intergenic 50.0%
TTCCCGGTGAGCGTTTCATT+GGG + chr2.1:4301917-4301936 MS.gene069901:CDS 50.0%
! CAGCTTTGTGCGGTTGAGTT+AGG - chr2.1:4303841-4303860 None:intergenic 50.0%
! CCGCACAAAGCTGGCTTATA+TGG + chr2.1:4303848-4303867 MS.gene069901:intron 50.0%
! GTGTGTTGAGTGTCGCACAT+TGG - chr2.1:4303695-4303714 None:intergenic 50.0%
! TGTGCTGGCATCAGAAGAGA+TGG + chr2.1:4305579-4305598 MS.gene069901:CDS 50.0%
!! CTACAAGCCCGATTTGCTGA+AGG + chr2.1:4304285-4304304 MS.gene069901:CDS 50.0%
!! GACTGGTCTGCCTGAAGTAA+TGG + chr2.1:4304243-4304262 MS.gene069901:CDS 50.0%
AATACAGATCCCAACCGCCC+AGG + chr2.1:4306349-4306368 MS.gene069901:intron 55.0%
AGGTCACGTGCACATGTAGC+AGG - chr2.1:4306445-4306464 None:intergenic 55.0%
ATACAGATCCCAACCGCCCA+GGG + chr2.1:4306350-4306369 MS.gene069901:intron 55.0%
ATAGGGAGGGGATGGAACTG+AGG + chr2.1:4304896-4304915 MS.gene069901:intron 55.0%
ATGTGTGACCGTGCACTTCC+CGG + chr2.1:4301901-4301920 MS.gene069901:CDS 55.0%
CACCTAGGTCACACTCAAGC+CGG - chr2.1:4303743-4303762 None:intergenic 55.0%
CCTCCCAATGAAACGCTCAC+CGG - chr2.1:4301923-4301942 None:intergenic 55.0%
CTCCCAATGAAACGCTCACC+GGG - chr2.1:4301922-4301941 None:intergenic 55.0%
CTTCCCGGTGAGCGTTTCAT+TGG + chr2.1:4301916-4301935 MS.gene069901:CDS 55.0%
GGGGTTCCATACACCGGATA+AGG + chr2.1:4303925-4303944 MS.gene069901:intron 55.0%
TGGGCGGTTGGGATCTGTAT+TGG - chr2.1:4306350-4306369 None:intergenic 55.0%
ATGTGCATCCCTGGGCGGTT+GGG - chr2.1:4306361-4306380 None:intergenic 60.0%
ATTCCTGCCTGGGCGTCTGA+GGG - chr2.1:4303718-4303737 None:intergenic 60.0%
CAAGCCGGCTATTCCTGCCT+GGG - chr2.1:4303728-4303747 None:intergenic 60.0%
CCGGTGAGCGTTTCATTGGG+AGG + chr2.1:4301920-4301939 MS.gene069901:CDS 60.0%
GCTTCATGTGCATCCCTGGG+CGG - chr2.1:4306366-4306385 None:intergenic 60.0%
TATTCCTGCCTGGGCGTCTG+AGG - chr2.1:4303719-4303738 None:intergenic 60.0%
TCAAGCCGGCTATTCCTGCC+TGG - chr2.1:4303729-4303748 None:intergenic 60.0%
! AACGCTCACCGGGAAGTGCA+CGG - chr2.1:4301912-4301931 None:intergenic 60.0%
!! AGCCGGCTTGAGTGTGACCT+AGG + chr2.1:4303738-4303757 MS.gene069901:intron 60.0%
AACACACCCCTCAGACGCCC+AGG + chr2.1:4303708-4303727 MS.gene069901:intron 65.0%
CATGTGCATCCCTGGGCGGT+TGG - chr2.1:4306362-4306381 None:intergenic 65.0%
CGGGCATCTGCGATGGCTTG+AGG - chr2.1:4305786-4305805 None:intergenic 65.0%
GACGCCCAGGCAGGAATAGC+CGG + chr2.1:4303721-4303740 MS.gene069901:intron 65.0%
TTCCTGCCTGGGCGTCTGAG+GGG - chr2.1:4303717-4303736 None:intergenic 65.0%
CACCCCTCAGACGCCCAGGC+AGG + chr2.1:4303712-4303731 MS.gene069901:intron 75.0%


Chromosome Type Strat End Strand Name
chr2.1 gene 4301901 4306674 4301901 ID=MS.gene069901
chr2.1 mRNA 4301901 4306674 4301901 ID=MS.gene069901.t1;Parent=MS.gene069901
chr2.1 exon 4301901 4302104 4301901 ID=MS.gene069901.t1.exon1;Parent=MS.gene069901.t1
chr2.1 CDS 4301901 4302104 4301901 ID=cds.MS.gene069901.t1;Parent=MS.gene069901.t1
chr2.1 exon 4302878 4302988 4302878 ID=MS.gene069901.t1.exon2;Parent=MS.gene069901.t1
chr2.1 CDS 4302878 4302988 4302878 ID=cds.MS.gene069901.t1;Parent=MS.gene069901.t1
chr2.1 exon 4303095 4303262 4303095 ID=MS.gene069901.t1.exon3;Parent=MS.gene069901.t1
chr2.1 CDS 4303095 4303262 4303095 ID=cds.MS.gene069901.t1;Parent=MS.gene069901.t1
chr2.1 exon 4303400 4303509 4303400 ID=MS.gene069901.t1.exon4;Parent=MS.gene069901.t1
chr2.1 CDS 4303400 4303509 4303400 ID=cds.MS.gene069901.t1;Parent=MS.gene069901.t1
chr2.1 exon 4304234 4304342 4304234 ID=MS.gene069901.t1.exon5;Parent=MS.gene069901.t1
chr2.1 CDS 4304234 4304342 4304234 ID=cds.MS.gene069901.t1;Parent=MS.gene069901.t1
chr2.1 exon 4305279 4305434 4305279 ID=MS.gene069901.t1.exon6;Parent=MS.gene069901.t1
chr2.1 CDS 4305279 4305434 4305279 ID=cds.MS.gene069901.t1;Parent=MS.gene069901.t1
chr2.1 exon 4305549 4305664 4305549 ID=MS.gene069901.t1.exon7;Parent=MS.gene069901.t1
chr2.1 CDS 4305549 4305664 4305549 ID=cds.MS.gene069901.t1;Parent=MS.gene069901.t1
chr2.1 exon 4305752 4305918 4305752 ID=MS.gene069901.t1.exon8;Parent=MS.gene069901.t1
chr2.1 CDS 4305752 4305918 4305752 ID=cds.MS.gene069901.t1;Parent=MS.gene069901.t1
chr2.1 exon 4306356 4306486 4306356 ID=MS.gene069901.t1.exon9;Parent=MS.gene069901.t1
chr2.1 CDS 4306356 4306486 4306356 ID=cds.MS.gene069901.t1;Parent=MS.gene069901.t1
chr2.1 exon 4306567 4306674 4306567 ID=MS.gene069901.t1.exon10;Parent=MS.gene069901.t1
chr2.1 CDS 4306567 4306674 4306567 ID=cds.MS.gene069901.t1;Parent=MS.gene069901.t1
Gene Sequence

>MS.gene069901

ATGTGTGACCGTGCACTTCCCGGTGAGCGTTTCATTGGGAGGATTACTCGAAAGAAGGGGAATTACGCGGAGGCTACTAAGGTTGAGACTTTAACTCCTCCTTTTGATGTTGTTGATGCGCCTTGTGTTTATGTTCCGCATTGTGGTGGTTGTAAGACGCAGAATTTGGCTTATCAGGCTCAGATTAAAGCTAAAGAGGAACAGGTGAGTGAGTGAATTATGATGTGTTTGGATTCGTTTATTGAGCTTATTTATTGGTATACATACTTGTGAAACTGTTTAAGAGAGTTTTTTAAATCAGCTTATGACATGTCTATGACGCTGTTTAGATAAACAACTTATTTTGCAACTTATGCATACATGCTTATCATGATAAGTACTCATGTATGAATCATAAGTTGTTGTTTTAGCTTATGGCAACCCTTTATAGTTCGTGACATAGGACATGCTTGGATTGATTTTTTTAAGCTTATTTATCTGCATAAGCACTTCTAAGGCTGTATGATGGAGTTTATAAAATCAGCTTATGGCATGTCTATAAGCTGCTGTTTTCAGCTTATGGGTCCATTTGGATTGATTTGTTTGAGCTTATCTAATGGGTAAGTGTTTGTGACACTGTTTGGAGGAACTTATGAAAACAACTTATGACATGTTCATCAGCTCCTTAAGTTTTCCAAGATGGCTTATGAAAACAACTTATAGCTTGTACAAAAACAATTTAACTTTATCTTTTGTTGTAAAAATAGCTTATACACAAAAACTTACCATGATGCGCTCTTATGCTATAAGCTGCAAATTAAATAATTTATCCAAACAAGGCCTATTTATATAAGTTTTCCATGATAGCACAAGTTGTAGTTTATACGATTTTTTTTTTACTTAATTTCATCTTTTGTTATATAAATAATTTAAACATTAGCACTTATATGATAACTGCTTATGTTATAAGCATTTAATTAAACTGTTTATATAAACAGGTCCGTGACTTGGTCATACATGTTGGAAGGTTTTCTCAGAAAGACTTGGAATTGAATGGTATTATGAAACCGGTTGTTCCTTGTGATATCCAGTTTCATTATAGAAACAAGGTTAGTTAGTTTATTTTTGTCATTTTCAAAAACTGTATATCTCATGCAAATGCATCTTTTGGTTAATGACTAAGTTGTATTGTGCTTTGTTTACTTTCTTGTGTAGATGGAATTCTCATTTGGTCCATATAAATGGTTGCCTAAAGAATCGCTGCACGAAAGAAATGTTGATGCTGGGAGTGAAAATTATGCACTTGGATTGCATGTTCCTGGTTTTTTTGATAAAATTATAAATGTTGAAAAGTGCTTACTACAAACTGATCCTGCTAATAAGGTATGCAATGTTGTTGTTTTTCTGTGATTCAACTGTTGCATGTTTCTGTGACAGTAACCTACACTTATTTGATTTCATATTCACAACTGGGAGGTTTATTGCATTCTCCTTATGTTTTGTCTTGAACATCTGAACAGGTTCTTGCGGCTATACAAGAATGTTGGAGAGATCCACAACTTGGTTTCTCACCCTACAATGTTCATTCACACAAAGGATTTCTTAAGCATTTGATGCTGAGAAGTGGAAGGTATTTAAGTTATATTATTTGTTCCTTGTCTTACTTGTTTTGGGTACACATGGACATTTTAGTTCTTGCATCTATATTCGTGGACCATAGAATTTGGGTCGAGCCTAAATAAACTTACAAAACCACCTTATAAGGTGGGAAATGCCGATCACTTATAAGCAGTATTTAGACCATATCACTATCCAATGTGCGACACTCAACACACCCCTCAGACGCCCAGGCAGGAATAGCCGGCTTGAGTGTGACCTAGGTGACTCAATTACGGGTGACCCAACATATATATGATAGACTCTCTATCTTAGAATTAGAATTTGTGTTGAGCCTAATGCCTAACTCAACCGCACAAAGCTGGCTTATATGGTGATGGATGCCCACCACTTACTATCACTATTCAAACCATATCACTATGCAATGTGGGGTTCCATACACCGGATAAGGCTCAAACATTGATTTTAAATTGGTATGGAGTTTATTTTAACTTGGGCAAAGGTGTGGGATGATGTGTCATTTAGAAATATAACTATATAAACAATAAAGTCATTGAATCACAAGATAAATACAATTTCGACAATGTTCAATTCCAAATTCCAACGAAACTTCATAAAATATGTAATGTGAGTAATAATACCTGAAAAAGCATCAAATTCAAAGGGGTGACATACCAATATTTCATTTGAAGGGTACCTTGTTTTCTATCAATATTAATATTTAATTTTTGCTCTAGGGATGTAATGACTGGTCTGCCTGAAGTAATGGTCAACTTTGTGACCTCTTCCTACAAGCCCGATTTGCTGAAGGTCCTAGTAGATAAAGTTTCTGCATTTCCCGAAGTGGTTGGTACTTAAGTTTTTCAATTTTTCACTACGATTATACATCCTGCTTTAGCTTCTTCATATGTGCTTCTTCCTTAACTTTCGAAACCCCTTAAACCTGTAATTTCTGTTTCTGTTGAAGGTATTAAACATTTAAGTGCTTCCTTGCATTCATCAACTTAAGCTATATAAGAGTTGATCTTAACACTGTAGTGGAGTTTCATTGATCAAGTGTCAGGAGTTTTGAGCCTTTTACACCCATTCTTTACGATCAAATTTAATTTCTATACAAGGTTAAATGGGCTTTTGCATCCTCCATGCTCCAAGCCAAAAAAGCTATAGCCCATAGGGTTGTCTAAATGACATGAAGCTATGTGGTGCTTCCTCGTAACATCTTAAGCTTTTAGGATAGTTGGTCCTTAACAATATCTGTCTATTTGATTGACCCGTAGATTTCAAAGTATATCCTGGGAATGGATCCTGTAACATCCCGAATCTGTTAGTTTGATTGACCCTCAGATTTCAAATTTTAAGGTATACCAAGGGGATGGATTCTGTAACATCCCACTTCTAAATAGGGAGGGGATGGAACTGAGGTGAACTGATGCTGAGCGAAATATTGTTTAGTTTGTCTAGAAAACGCTTGGCACTGAACTATGATTACTAAACCTTATTATGTAAGAGATCTCATCAATGTAACTATTAACATTTTAGTTTTATGGATGGGTGAACTTCAGGATTTCTGTGATAACATATTTTAAAAAATTGTTGAAATTTTATTGAGTAAAATTTTCATTTTTAAAGTGTATTTCCCTCATACGTTGTCACTTTATTCAATACTTAACCCCAACTGTCTCTTTTTGTGTGCGTGGATATCTGACCTTTTTAACTTGTTTCCAAACTTTATGTAATTATTGTATTTAATACCAGTAAATTCCTTCTCTGCATGAATGATAGGTAAGCATCATGAATAATGTAAATACTTCTGTTGGTAACACATCTGTTGGGGAGGAGGAATACACTTTGCATGGGAAATCTAGCATTACAGAGACCTTAAGAGGGCTTACATTCCAAATATCAGCAAACTCTTTCTTTCAAACAAATACTCATCAGGTTTACAATATGCCAATTTTTTTGGCTCTGTCTTTAGATCCTGTCCCATATTTTATTTCTTAAATTGAATAATGACCATCAGAAAAGAAATGTAAGCAAGATTTTCCCTATTAGGCAGAAGTTTTGTATAAACTCATCGAAGAATGTGCTGGCATCAGAAGAGATGGCTCAGAAGTTGTCCTTGACCTGTTTTGTGGAACAGGCACCATAGGTCTGACACTTGCAAAAAGGTATGCTTTTATCTTCATTTGGTTTTAGTATATTAGGACAAAATGTCAAACAATTAAAGTAATGTCTTCTCTTCCAATTTTGAACAGTGTAAAGCATGTTTATGGCTATGAAGTTGTTCCTCAAGCCATCGCAGATGCCCGACTTAATGCCAAGCTAAATGGCATACAAAATGCAACATTTATTGAGGGGGATCTTAATAAAATTGATGGAAATTTCGGGAAGAATTTTCCTAAACCTGACATTGTTATTTCAGGTTCGTTGTCCTACATTTCCATATTCCTACTTATTCTATTGCTATATTATTTTATTCAATTAGTTTGACTTGTGAACTTTATTTGATCAGAAGTATATATGGATCTATCCTATCCTAATTGTTGAAATTGCCATTGTTGTTCACTTCTTTCCCCCCACCCAACCCATTTATTTGAATGTTAGCTGAAGCATATATCTATTCTGCATTTGCATACATTTGAGCTGTACTTGCTTCGTTATTTATTTCTTTAATGGAGGGAGATTTTCTGGTTTATGCGAGTTTTAATAAGTAATTGCTTCAAGTCATCGACAGATAATTTCCATGTAAAGAAAACCATATTTGCTCTATTTTAATTATCAACATGCTGATCATATATATTCTTCACACTCACCGAAGATCACAATTAAACATGTTGTCATTTGGTGTGACCAATACAGATCCCAACCGCCCAGGGATGCACATGAAGCTGATCAAGTTCCTCTTAAATCTTAGGGCTCCTCGCATAGTGTATGTTTCATGCAATCCTGCTACATGTGCACGTGACCTTGATTATCTCTGTCATGGTGTGGTATGTGTCATTTTAATTTTATTGTGTTTTAGCTCTATTTTTGAGATTCAACTATCTGAGTTGTTGAAGGTTTTGTGTAGGCAGAGCTGAATATAGAAGGATGTTATAAGCTAATAAGCCTACAGCCAGTTGACATGTTCCCACACACACCTCATATCGAGTGTGTTTGCCTTCTGGAGCTTTGTTGA
Protein sequence

>MS.gene069901.t1

MCDRALPGERFIGRITRKKGNYAEATKVETLTPPFDVVDAPCVYVPHCGGCKTQNLAYQAQIKAKEEQVRDLVIHVGRFSQKDLELNGIMKPVVPCDIQFHYRNKMEFSFGPYKWLPKESLHERNVDAGSENYALGLHVPGFFDKIINVEKCLLQTDPANKVLAAIQECWRDPQLGFSPYNVHSHKGFLKHLMLRSGRDVMTGLPEVMVNFVTSSYKPDLLKVLVDKVSAFPEVVSIMNNVNTSVGNTSVGEEEYTLHGKSSITETLRGLTFQISANSFFQTNTHQAEVLYKLIEECAGIRRDGSEVVLDLFCGTGTIGLTLAKSVKHVYGYEVVPQAIADARLNAKLNGIQNATFIEGDLNKIDGNFGKNFPKPDIVISDPNRPGMHMKLIKFLLNLRAPRIVYVSCNPATCARDLDYLCHGVAELNIEGCYKLISLQPVDMFPHTPHIECVCLLELC