Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069968.t1 | XP_003603887.2 | 72.1 | 412 | 33 | 5 | 4 | 415 | 1178 | 1507 | 9.60E-158 | 566.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069968.t1 | Q9SXA1 | 55.9 | 410 | 97 | 7 | 7 | 415 | 1174 | 1500 | 2.2e-118 | 427.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069968.t1 | G7J6H9 | 72.1 | 412 | 33 | 5 | 4 | 415 | 1178 | 1507 | 6.9e-158 | 566.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050817 | MS.gene069968 | 0.814697 | 1.35E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069968.t1 | MTR_3g116250 | 97.917 | 192 | 4 | 0 | 4 | 195 | 1178 | 1369 | 3.64e-125 | 399 |
| MS.gene069968.t1 | MTR_3g116250 | 92.593 | 108 | 8 | 0 | 308 | 415 | 1400 | 1507 | 8.47e-61 | 214 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069968.t1 | AT1G49340 | 81.053 | 190 | 36 | 0 | 7 | 196 | 1167 | 1356 | 1.12e-101 | 332 |
| MS.gene069968.t1 | AT1G49340 | 59.633 | 109 | 42 | 2 | 308 | 415 | 1386 | 1493 | 8.46e-34 | 135 |
| MS.gene069968.t1 | AT1G49340 | 81.053 | 190 | 36 | 0 | 7 | 196 | 1167 | 1356 | 1.12e-101 | 332 |
| MS.gene069968.t1 | AT1G49340 | 59.633 | 109 | 42 | 2 | 308 | 415 | 1386 | 1493 | 8.46e-34 | 135 |
| MS.gene069968.t1 | AT1G49340 | 81.053 | 190 | 36 | 0 | 7 | 196 | 1174 | 1363 | 1.23e-101 | 332 |
| MS.gene069968.t1 | AT1G49340 | 59.633 | 109 | 42 | 2 | 308 | 415 | 1393 | 1500 | 8.16e-34 | 135 |
| MS.gene069968.t1 | AT1G49340 | 81.053 | 190 | 36 | 0 | 7 | 196 | 1174 | 1363 | 1.23e-101 | 332 |
| MS.gene069968.t1 | AT1G49340 | 59.633 | 109 | 42 | 2 | 308 | 415 | 1393 | 1500 | 8.16e-34 | 135 |
Find 106 sgRNAs with CRISPR-Local
Find 307 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTACTGCTCCTGCCAGTTTC+AGG | 0.138444 | 3.1:-91829015 | MS.gene069968:CDS |
| CCAAGATTAGTTCAGATAAA+TGG | 0.164604 | 3.1:-91827509 | MS.gene069968:CDS |
| GAATACACGTTATAATCTTT+TGG | 0.213641 | 3.1:+91828753 | None:intergenic |
| TGATCTCTTTCATCCTGTTT+GGG | 0.216233 | 3.1:-91827756 | MS.gene069968:CDS |
| AAAGGAAATGGACAAGAAAA+TGG | 0.229363 | 3.1:-91827953 | MS.gene069968:CDS |
| ATGATCTCTTTCATCCTGTT+TGG | 0.250618 | 3.1:-91827757 | MS.gene069968:CDS |
| AACTTCTCCGTCTTCTTTGC+TGG | 0.258840 | 3.1:-91831407 | MS.gene069968:CDS |
| TCTGCGTGCCAATATGCTTT+TGG | 0.261701 | 3.1:-91828616 | MS.gene069968:CDS |
| GTGCATTTGCAGGGCCGCAT+TGG | 0.297373 | 3.1:-91828107 | MS.gene069968:intron |
| CCATTTATCTGAACTAATCT+TGG | 0.298616 | 3.1:+91827509 | None:intergenic |
| TTTCTTATGGACAAGAGTTC+TGG | 0.300725 | 3.1:-91831459 | None:intergenic |
| TCAATCTGAGGCTGTGATTC+AGG | 0.304416 | 3.1:+91831168 | None:intergenic |
| GGCACTGATAAAGCAATCTT+TGG | 0.312777 | 3.1:+91827453 | None:intergenic |
| CTTTGTATAGAAGATATTTC+AGG | 0.319864 | 3.1:-91828367 | MS.gene069968:intron |
| GCTTCTCGGTAGGATGTTGC+AGG | 0.335892 | 3.1:-91829120 | MS.gene069968:CDS |
| AGCTGATAGGCTTGAGGTCT+GGG | 0.338339 | 3.1:-91827663 | MS.gene069968:CDS |
| TAGTTTGTGTCATACCATTC+AGG | 0.346869 | 3.1:+91828067 | None:intergenic |
| AAAGGAGATGCTGTTCAATT+TGG | 0.347108 | 3.1:-91827980 | MS.gene069968:intron |
| CAATTTGGTTCAAAAGGAAA+TGG | 0.355911 | 3.1:-91827965 | MS.gene069968:CDS |
| GCTGTTCAATTTGGTTCAAA+AGG | 0.360820 | 3.1:-91827971 | MS.gene069968:CDS |
| GGCTGTGATTCAGGCTCCCC+GGG | 0.366307 | 3.1:+91831177 | None:intergenic |
| AGCTTGTTGATGCATGGTTA+TGG | 0.370952 | 3.1:-91831281 | MS.gene069968:CDS |
| TTCAGTCTTCACAAATGTAT+TGG | 0.375567 | 3.1:+91827417 | None:intergenic |
| AAGCTGATAGGCTTGAGGTC+TGG | 0.380097 | 3.1:-91827664 | MS.gene069968:CDS |
| AGATAATTGCTCATCGACTA+TGG | 0.386587 | 3.1:-91831134 | MS.gene069968:CDS |
| TTTGTAGATGACCCTGAAAC+TGG | 0.388445 | 3.1:+91829003 | None:intergenic |
| TGCATTTGCAGGGCCGCATT+GGG | 0.399806 | 3.1:-91828106 | MS.gene069968:intron |
| GTTTCTGCTGCACCTCAGCT+TGG | 0.400339 | 3.1:-91831321 | MS.gene069968:CDS |
| AGGCTGTGATTCAGGCTCCC+CGG | 0.408359 | 3.1:+91831176 | None:intergenic |
| GTCTTCACAAATGTATTGGT+TGG | 0.410597 | 3.1:+91827421 | None:intergenic |
| TCAAATGGGGCTTCAGCTGC+TGG | 0.413604 | 3.1:-91828976 | MS.gene069968:CDS |
| GATATATACTTTGTGTTAGT+GGG | 0.420908 | 3.1:+91827635 | None:intergenic |
| TCATCCTGTTTGGGGTCAAA+TGG | 0.428443 | 3.1:-91827747 | MS.gene069968:CDS |
| CAAGATTAGTTCAGATAAAT+GGG | 0.429262 | 3.1:-91827508 | MS.gene069968:CDS |
| AGATATATACTTTGTGTTAG+TGG | 0.437571 | 3.1:+91827634 | None:intergenic |
| GTGGAGGCAACTCTGCTTCT+CGG | 0.441231 | 3.1:-91829134 | MS.gene069968:CDS |
| CATTTATCTGAACTAATCTT+GGG | 0.454659 | 3.1:+91827510 | None:intergenic |
| TTCTCCATTTGACCCCAAAC+AGG | 0.455580 | 3.1:+91827743 | None:intergenic |
| GTTCAACGTCTCTTCTTGCA+TGG | 0.455682 | 3.1:-91828727 | MS.gene069968:CDS |
| AATATTACCACATCAGCTAA+AGG | 0.462093 | 3.1:+91827926 | None:intergenic |
| TCTTCACAAATGTATTGGTT+GGG | 0.468024 | 3.1:+91827422 | None:intergenic |
| ACACATGATGCAATGGAAAC+CGG | 0.469401 | 3.1:-91831366 | MS.gene069968:CDS |
| TTTGCAGGGCCGCATTGGGT+TGG | 0.472843 | 3.1:-91828102 | MS.gene069968:intron |
| GTCTACCGCGAAGGCAGTCC+TGG | 0.483520 | 3.1:+91827476 | None:intergenic |
| ATTGCTCATCGACTATGGCT+TGG | 0.485093 | 3.1:-91831129 | MS.gene069968:CDS |
| CTAAGGCCTCACCTGTCCCC+CGG | 0.485758 | 3.1:-91831195 | MS.gene069968:CDS |
| GGGGCTTAGATGGGATGAGT+TGG | 0.485801 | 3.1:-91828594 | MS.gene069968:CDS |
| TTGCTGAGCTTGTTGATGCA+TGG | 0.487339 | 3.1:-91831287 | MS.gene069968:CDS |
| TCACATCATCCTGCAGCCAC+TGG | 0.487678 | 3.1:-91829071 | MS.gene069968:CDS |
| GGTTTGCTTATGAGCCTGAA+TGG | 0.492742 | 3.1:-91828081 | MS.gene069968:intron |
| TACTGCTCCTGCCAGTTTCA+GGG | 0.493149 | 3.1:-91829014 | MS.gene069968:CDS |
| AAGGAAATGGACAAGAAAAT+GGG | 0.494367 | 3.1:-91827952 | MS.gene069968:CDS |
| GGCTTCAGCTGCTGGAAGAT+CGG | 0.513220 | 3.1:-91828968 | MS.gene069968:CDS |
| CCTTTCACATCACCACGGTA+AGG | 0.515247 | 3.1:+91828695 | None:intergenic |
| GATCTCTTTCATCCTGTTTG+GGG | 0.516172 | 3.1:-91827755 | MS.gene069968:CDS |
| ATATTACCACATCAGCTAAA+GGG | 0.517201 | 3.1:+91827927 | None:intergenic |
| GCACTGATAAAGCAATCTTT+GGG | 0.520914 | 3.1:+91827454 | None:intergenic |
| GTGGGCCTGCTGCAAAACTA+AGG | 0.521026 | 3.1:-91831212 | MS.gene069968:CDS |
| TGACCATCTAAAAGTGAAGC+AGG | 0.524425 | 3.1:+91828646 | None:intergenic |
| ACATACCAGGACTGCCTTCG+CGG | 0.528035 | 3.1:-91827481 | MS.gene069968:CDS |
| TGCTGGAAGATCGGATCTAT+CGG | 0.528858 | 3.1:-91828959 | MS.gene069968:intron |
| TATGTCAACATGAAGCTGAT+AGG | 0.530463 | 3.1:-91827676 | MS.gene069968:CDS |
| GCAGAGTTGCCTCCACACTT+TGG | 0.541814 | 3.1:+91829141 | None:intergenic |
| TGGGAACCCTTTAGCTGATG+TGG | 0.547312 | 3.1:-91827933 | MS.gene069968:intron |
| ATTGCTTTATCAGTGCCTCT+AGG | 0.550851 | 3.1:-91827447 | MS.gene069968:CDS |
| GAAATCATGTAGACTAACTC+AGG | 0.564491 | 3.1:-91828564 | MS.gene069968:CDS |
| TAGATGACCCTGAAACTGGC+AGG | 0.573401 | 3.1:+91829007 | None:intergenic |
| TGAAGCAGGCCAAAGTTGCA+TGG | 0.574298 | 3.1:+91828660 | None:intergenic |
| CATGTATCTTACTTTCACAT+TGG | 0.583149 | 3.1:-91828223 | MS.gene069968:CDS |
| ATGGACAATTGATACCAAGC+GGG | 0.583682 | 3.1:-91831262 | MS.gene069968:CDS |
| CATCTGAAACAAGGTACTGT+GGG | 0.584306 | 3.1:-91831230 | MS.gene069968:CDS |
| TATTTCCACACATGATGCAA+TGG | 0.586475 | 3.1:-91831373 | MS.gene069968:CDS |
| AGGCAACTCTGCTTCTCGGT+AGG | 0.588169 | 3.1:-91829130 | MS.gene069968:CDS |
| GGATCTAAATCGAATGTGGA+GGG | 0.590541 | 3.1:-91831438 | MS.gene069968:CDS |
| AGGGGACGACAAAGCTTCCA+TGG | 0.590577 | 3.1:-91829100 | MS.gene069968:CDS |
| AATCTTTGGGTCTACCGCGA+AGG | 0.593174 | 3.1:+91827467 | None:intergenic |
| CTTCTCGGTAGGATGTTGCA+GGG | 0.595990 | 3.1:-91829119 | MS.gene069968:CDS |
| CAAATGGAGAACTATGCTGT+TGG | 0.598752 | 3.1:-91827731 | MS.gene069968:CDS |
| TTCTGGATCTAAATCGAATG+TGG | 0.602420 | 3.1:-91831442 | MS.gene069968:CDS |
| GGTTTCCATTGCATCATGTG+TGG | 0.610649 | 3.1:+91831368 | None:intergenic |
| TGGATCTAAATCGAATGTGG+AGG | 0.611703 | 3.1:-91831439 | MS.gene069968:CDS |
| AGGACAAGAGCTCCAAGCTG+AGG | 0.611826 | 3.1:+91831309 | None:intergenic |
| CTTTCACATCACCACGGTAA+GGG | 0.614099 | 3.1:+91828696 | None:intergenic |
| GCATCTGAAACAAGGTACTG+TGG | 0.615081 | 3.1:-91831231 | MS.gene069968:CDS |
| GCAAGAAGAGACGTTGAACA+AGG | 0.615136 | 3.1:+91828731 | None:intergenic |
| TGGTTTCAATTCCCTTACCG+TGG | 0.615816 | 3.1:-91828707 | MS.gene069968:CDS |
| ATTGTTTACTTTGATCACCT+CGG | 0.617718 | 3.1:+91828338 | None:intergenic |
| ACATGAAGCTGATAGGCTTG+AGG | 0.620179 | 3.1:-91827669 | MS.gene069968:CDS |
| CCTTACCGTGGTGATGTGAA+AGG | 0.620384 | 3.1:-91828695 | MS.gene069968:CDS |
| GGCGGTTCGACACCAAAGTG+TGG | 0.625928 | 3.1:-91829153 | MS.gene069968:CDS |
| TCATGTGTGGAAATATATGC+AGG | 0.632244 | 3.1:+91831381 | None:intergenic |
| CAGGACACCAGCAAAGAAGA+CGG | 0.641746 | 3.1:+91831400 | None:intergenic |
| ATAAATGGGTAGAACATACC+AGG | 0.648458 | 3.1:-91827494 | MS.gene069968:CDS |
| ATGCATCAACAAGCTCAGCA+AGG | 0.673487 | 3.1:+91831289 | None:intergenic |
| TTCTCGGTAGGATGTTGCAG+GGG | 0.674042 | 3.1:-91829118 | MS.gene069968:CDS |
| CCATGTCCATATGAAAACAC+CGG | 0.676634 | 3.1:+91831347 | None:intergenic |
| GGTTCGACACCAAAGTGTGG+AGG | 0.681781 | 3.1:-91829150 | MS.gene069968:CDS |
| TGCTCAACGAGATCAATCTG+AGG | 0.683227 | 3.1:+91831156 | None:intergenic |
| TATGGACAATTGATACCAAG+CGG | 0.689155 | 3.1:-91831263 | MS.gene069968:CDS |
| GATATTTCAGGAAATGACCG+AGG | 0.707482 | 3.1:-91828355 | MS.gene069968:CDS |
| CTGTGATTCAGGCTCCCCGG+GGG | 0.708736 | 3.1:+91831179 | None:intergenic |
| TGGACAATTGATACCAAGCG+GGG | 0.715622 | 3.1:-91831261 | MS.gene069968:CDS |
| TGTATTGGTTGGGAACCTAG+AGG | 0.719754 | 3.1:+91827432 | None:intergenic |
| ATAAGCAAACCAACCCAATG+CGG | 0.727793 | 3.1:+91828093 | None:intergenic |
| GCTGTGATTCAGGCTCCCCG+GGG | 0.730448 | 3.1:+91831178 | None:intergenic |
| AAACACCTTTCACATCACCA+CGG | 0.758559 | 3.1:+91828690 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATAAAGAATAAATACAAA+AGG | + | chr3.1:91830611-91830630 | None:intergenic | 10.0% |
| !!! | CATTTTTTATTTTTTTTTGA+AGG | - | chr3.1:91828911-91828930 | MS.gene069968:intron | 10.0% |
| !!! | TAAAAAGATTTTTTAATGTT+TGG | - | chr3.1:91828961-91828980 | MS.gene069968:CDS | 10.0% |
| !!! | TATCACATTTTATTTTATTT+TGG | - | chr3.1:91828154-91828173 | MS.gene069968:intron | 10.0% |
| !! | ATAAAAAAATCCAAATTTGT+TGG | + | chr3.1:91828595-91828614 | None:intergenic | 15.0% |
| !! | ATCATAATAAAAATAGCTTT+AGG | - | chr3.1:91828654-91828673 | MS.gene069968:CDS | 15.0% |
| !! | CTATAAATATTAACTAGAAT+CGG | + | chr3.1:91828331-91828350 | None:intergenic | 15.0% |
| !! | TTATTACAATTTAGAAAAAC+AGG | + | chr3.1:91827846-91827865 | None:intergenic | 15.0% |
| !!! | AAGATCATTTTTAAAATTAG+AGG | + | chr3.1:91828774-91828793 | None:intergenic | 15.0% |
| !!! | AAGTAAATGAAAATATTTTG+AGG | + | chr3.1:91828476-91828495 | None:intergenic | 15.0% |
| !!! | AATTGCTGTTTATTTTATTT+TGG | - | chr3.1:91827864-91827883 | MS.gene069968:intron | 15.0% |
| !!! | CATCTTATAATTTTTTTCTT+TGG | - | chr3.1:91829946-91829965 | MS.gene069968:intron | 15.0% |
| !!! | GTATTTATTCTTTATTTTCT+TGG | - | chr3.1:91830614-91830633 | MS.gene069968:intron | 15.0% |
| !! | AAAAAATCATTCAATCTTTG+CGG | + | chr3.1:91828225-91828244 | None:intergenic | 20.0% |
| !! | AATGAGAAGATGAAAATATT+TGG | + | chr3.1:91830368-91830387 | None:intergenic | 20.0% |
| !! | ATAACTAGTAAATATACTGA+GGG | - | chr3.1:91828385-91828404 | MS.gene069968:intron | 20.0% |
| !! | ATCTACAAAAATTTCAAATG+GGG | - | chr3.1:91829889-91829908 | MS.gene069968:intron | 20.0% |
| !! | CAAACATAATTAGATTTACA+AGG | + | chr3.1:91829414-91829433 | None:intergenic | 20.0% |
| !! | CATCTACAAAAATTTCAAAT+GGG | - | chr3.1:91829888-91829907 | MS.gene069968:intron | 20.0% |
| !! | CTTGTAAATCTAATTATGTT+TGG | - | chr3.1:91829412-91829431 | MS.gene069968:intron | 20.0% |
| !! | TCATCTACAAAAATTTCAAA+TGG | - | chr3.1:91829887-91829906 | MS.gene069968:intron | 20.0% |
| !! | TCATTTGAAAAGAACAAAAA+AGG | - | chr3.1:91828806-91828825 | MS.gene069968:intron | 20.0% |
| !! | TGAAATATCTTCTATACAAA+GGG | + | chr3.1:91830512-91830531 | None:intergenic | 20.0% |
| !!! | AATACACGTTATAATCTTTT+GGG | + | chr3.1:91830127-91830146 | None:intergenic | 20.0% |
| !!! | ATCAGATTTTAAAGATATGA+AGG | + | chr3.1:91830429-91830448 | None:intergenic | 20.0% |
| !!! | GTTTCTTTTATAGTTTTTCT+AGG | + | chr3.1:91829218-91829237 | None:intergenic | 20.0% |
| !!! | TATGAAGGAAATAATTTTGA+CGG | + | chr3.1:91830414-91830433 | None:intergenic | 20.0% |
| !!! | TCAATGTTTTAACAAAATAG+AGG | + | chr3.1:91829640-91829659 | None:intergenic | 20.0% |
| !!! | TTCTATCATAAACCATATTT+TGG | + | chr3.1:91829274-91829293 | None:intergenic | 20.0% |
| !!! | TTTTGTTTAGTAGTGTATTA+TGG | + | chr3.1:91829079-91829098 | None:intergenic | 20.0% |
| !!! | TTTTTAAAATTAGAGGTGAT+TGG | + | chr3.1:91828767-91828786 | None:intergenic | 20.0% |
| ! | AAAAAAAAAAATGACGCAGT+AGG | + | chr3.1:91829377-91829396 | None:intergenic | 25.0% |
| ! | AAACAATTAGAAAGAGAGTT+CGG | - | chr3.1:91827934-91827953 | MS.gene069968:CDS | 25.0% |
| ! | AAATTCTTAGAACTTTATGC+AGG | - | chr3.1:91829097-91829116 | MS.gene069968:CDS | 25.0% |
| ! | ACAAGATAAGTAGTAATACA+GGG | + | chr3.1:91829698-91829717 | None:intergenic | 25.0% |
| ! | ACATAATTAGATTTACAAGG+CGG | + | chr3.1:91829411-91829430 | None:intergenic | 25.0% |
| ! | AGAAACTATTAGAAAAGACT+TGG | - | chr3.1:91829232-91829251 | MS.gene069968:intron | 25.0% |
| ! | AGATATATACTTTGTGTTAG+TGG | + | chr3.1:91831247-91831266 | None:intergenic | 25.0% |
| ! | ATTTCAATTAGTCCAAAGAA+AGG | + | chr3.1:91830745-91830764 | None:intergenic | 25.0% |
| ! | CATTTATCTGAACTAATCTT+GGG | + | chr3.1:91831371-91831390 | None:intergenic | 25.0% |
| ! | CTGAAATATCTTCTATACAA+AGG | + | chr3.1:91830513-91830532 | None:intergenic | 25.0% |
| ! | CTTTGTATAGAAGATATTTC+AGG | - | chr3.1:91830511-91830530 | MS.gene069968:intron | 25.0% |
| ! | GAACACCAGAAAATATTATT+TGG | + | chr3.1:91829497-91829516 | None:intergenic | 25.0% |
| ! | GATAACTAGTAAATATACTG+AGG | - | chr3.1:91828384-91828403 | MS.gene069968:intron | 25.0% |
| ! | GATATATACTTTGTGTTAGT+GGG | + | chr3.1:91831246-91831265 | None:intergenic | 25.0% |
| ! | TAAAAATGATCTTGATCGTA+TGG | - | chr3.1:91828781-91828800 | MS.gene069968:CDS | 25.0% |
| ! | TAATGAGTTAGACCAAAATA+TGG | - | chr3.1:91829259-91829278 | MS.gene069968:intron | 25.0% |
| ! | TAATGTTTGGAAACAAGAAA+AGG | - | chr3.1:91828974-91828993 | MS.gene069968:CDS | 25.0% |
| ! | TCACGAAAAATTAAGCAAAA+AGG | + | chr3.1:91831051-91831070 | None:intergenic | 25.0% |
| ! | TCTATGCATATGTAGATATT+AGG | + | chr3.1:91831101-91831120 | None:intergenic | 25.0% |
| ! | TTGGACTAATTGAAATTGTT+TGG | - | chr3.1:91830749-91830768 | MS.gene069968:intron | 25.0% |
| !! | AACCACCAAATAATATTTTC+TGG | - | chr3.1:91829489-91829508 | MS.gene069968:intron | 25.0% |
| !! | CAAGATTAGTTCAGATAAAT+GGG | - | chr3.1:91831370-91831389 | MS.gene069968:CDS | 25.0% |
| !! | GAATACACGTTATAATCTTT+TGG | + | chr3.1:91830128-91830147 | None:intergenic | 25.0% |
| !! | TACAAATTTTACTCAATGTG+AGG | - | chr3.1:91830834-91830853 | MS.gene069968:intron | 25.0% |
| !!! | AATAATATTTTCTGGTGTTC+TGG | - | chr3.1:91829497-91829516 | MS.gene069968:intron | 25.0% |
| !!! | ATGTTTTAACAAAATAGAGG+TGG | + | chr3.1:91829637-91829656 | None:intergenic | 25.0% |
| !!! | TTTTTGAAGGATTCATGTTT+TGG | - | chr3.1:91828924-91828943 | MS.gene069968:intron | 25.0% |
| AAAGGAAATGGACAAGAAAA+TGG | - | chr3.1:91830925-91830944 | MS.gene069968:intron | 30.0% | |
| AACAATTAGAAAGAGAGTTC+GGG | - | chr3.1:91827935-91827954 | MS.gene069968:CDS | 30.0% | |
| AAGGAAATGGACAAGAAAAT+GGG | - | chr3.1:91830926-91830945 | MS.gene069968:intron | 30.0% | |
| AATATTACCACATCAGCTAA+AGG | + | chr3.1:91830955-91830974 | None:intergenic | 30.0% | |
| AATTGCACAAATCATTTCCA+AGG | + | chr3.1:91831076-91831095 | None:intergenic | 30.0% | |
| ATACATGTTGAACAATGTGT+GGG | + | chr3.1:91829129-91829148 | None:intergenic | 30.0% | |
| ATATTACCACATCAGCTAAA+GGG | + | chr3.1:91830954-91830973 | None:intergenic | 30.0% | |
| ATCGTAATTCTATCCCATAT+AGG | + | chr3.1:91827966-91827985 | None:intergenic | 30.0% | |
| ATTGTTTACTTTGATCACCT+CGG | + | chr3.1:91830543-91830562 | None:intergenic | 30.0% | |
| CACCAGAAAATATTATTTGG+TGG | + | chr3.1:91829494-91829513 | None:intergenic | 30.0% | |
| CATGTATCTTACTTTCACAT+TGG | - | chr3.1:91830655-91830674 | MS.gene069968:intron | 30.0% | |
| CATTACCTTTCAAATGTGAA+AGG | - | chr3.1:91830880-91830899 | MS.gene069968:intron | 30.0% | |
| CCATTTATCTGAACTAATCT+TGG | + | chr3.1:91831372-91831391 | None:intergenic | 30.0% | |
| CCTTAGACATAGAAAATATG+AGG | + | chr3.1:91828558-91828577 | None:intergenic | 30.0% | |
| GACAAGATAAGTAGTAATAC+AGG | + | chr3.1:91829699-91829718 | None:intergenic | 30.0% | |
| TTAACAAAATAGAGGTGGTA+AGG | + | chr3.1:91829632-91829651 | None:intergenic | 30.0% | |
| ! | ATATATCTCTTTTTGACGAC+TGG | - | chr3.1:91831259-91831278 | MS.gene069968:CDS | 30.0% |
| ! | ATTTCTCATTGATCGTTTTG+AGG | - | chr3.1:91827772-91827791 | MS.gene069968:intron | 30.0% |
| ! | CAATTTGGTTCAAAAGGAAA+TGG | - | chr3.1:91830913-91830932 | MS.gene069968:intron | 30.0% |
| ! | CCAAGATTAGTTCAGATAAA+TGG | - | chr3.1:91831369-91831388 | MS.gene069968:CDS | 30.0% |
| ! | CCTCATATTTTCTATGTCTA+AGG | - | chr3.1:91828555-91828574 | MS.gene069968:CDS | 30.0% |
| ! | CTTAATTTTTCGTGAAACCT+TGG | - | chr3.1:91831056-91831075 | MS.gene069968:intron | 30.0% |
| ! | GGTTACTCTAGGTAAATTTT+AGG | + | chr3.1:91829473-91829492 | None:intergenic | 30.0% |
| ! | TATTATTTGGTGGTTACTCT+AGG | + | chr3.1:91829484-91829503 | None:intergenic | 30.0% |
| ! | TGGTATCTGTGTATTTTTCA+GGG | - | chr3.1:91831331-91831350 | MS.gene069968:CDS | 30.0% |
| !! | ATCCAGAAATTTTGAAAGTG+GGG | - | chr3.1:91828121-91828140 | MS.gene069968:intron | 30.0% |
| !! | GATCCAGAAATTTTGAAAGT+GGG | - | chr3.1:91828120-91828139 | MS.gene069968:intron | 30.0% |
| !! | TATGTTTGGTTTGACTTCTT+GGG | - | chr3.1:91829426-91829445 | MS.gene069968:intron | 30.0% |
| !! | TCAAGTTGAGTTTAAAGTGT+AGG | - | chr3.1:91828532-91828551 | MS.gene069968:intron | 30.0% |
| !! | TTATGTTTGGTTTGACTTCT+TGG | - | chr3.1:91829425-91829444 | MS.gene069968:intron | 30.0% |
| AAAGGAGATGCTGTTCAATT+TGG | - | chr3.1:91830898-91830917 | MS.gene069968:intron | 35.0% | |
| AAGAGAGAAAAGTTGTGTGA+TGG | - | chr3.1:91829024-91829043 | MS.gene069968:CDS | 35.0% | |
| ACCCATCTAAGTGTATTGTT+GGG | - | chr3.1:91830008-91830027 | MS.gene069968:intron | 35.0% | |
| AGAGAGAAAAGTTGTGTGAT+GGG | - | chr3.1:91829025-91829044 | MS.gene069968:CDS | 35.0% | |
| ATAAATGGGTAGAACATACC+AGG | - | chr3.1:91831384-91831403 | MS.gene069968:CDS | 35.0% | |
| ATCTACTCTCCTTATAACCA+GGG | + | chr3.1:91829156-91829175 | None:intergenic | 35.0% | |
| ATGATCTCTTTCATCCTGTT+TGG | - | chr3.1:91831121-91831140 | MS.gene069968:CDS | 35.0% | |
| ATGTCACGTATGATAAGTGT+GGG | - | chr3.1:91828999-91829018 | MS.gene069968:CDS | 35.0% | |
| CATCTCCTTTCACATTTGAA+AGG | + | chr3.1:91830888-91830907 | None:intergenic | 35.0% | |
| CTGAAAAATACACAGATACC+AGG | + | chr3.1:91831332-91831351 | None:intergenic | 35.0% | |
| CTGCTTATAACAGAATCTAC+AGG | + | chr3.1:91828095-91828114 | None:intergenic | 35.0% | |
| GAAAATAGCTTAGGTGGTTT+GGG | - | chr3.1:91828054-91828073 | MS.gene069968:intron | 35.0% | |
| GAAATCATGTAGACTAACTC+AGG | - | chr3.1:91830314-91830333 | MS.gene069968:intron | 35.0% | |
| GATACATGTTGAACAATGTG+TGG | + | chr3.1:91829130-91829149 | None:intergenic | 35.0% | |
| GATTCTGTTATAAGCAGTGA+CGG | - | chr3.1:91828098-91828117 | MS.gene069968:CDS | 35.0% | |
| GCAAAACATTCAGCTTGAAA+TGG | + | chr3.1:91830490-91830509 | None:intergenic | 35.0% | |
| GGATGATGTGAAAAATTCCA+TGG | + | chr3.1:91829798-91829817 | None:intergenic | 35.0% | |
| TAACTTACACTTTCTTGTCG+TGG | - | chr3.1:91827819-91827838 | MS.gene069968:intron | 35.0% | |
| TACCAGGTATTTGAAAGATC+AGG | + | chr3.1:91831316-91831335 | None:intergenic | 35.0% | |
| TACCCATCTAAGTGTATTGT+TGG | - | chr3.1:91830007-91830026 | MS.gene069968:intron | 35.0% | |
| TATAAGGAGAGTAGATGCAA+TGG | - | chr3.1:91829160-91829179 | MS.gene069968:intron | 35.0% | |
| TATGGACAATTGATACCAAG+CGG | - | chr3.1:91827615-91827634 | MS.gene069968:intron | 35.0% | |
| TATGTCAACATGAAGCTGAT+AGG | - | chr3.1:91831202-91831221 | MS.gene069968:CDS | 35.0% | |
| TATGTCACGTATGATAAGTG+TGG | - | chr3.1:91828998-91829017 | MS.gene069968:CDS | 35.0% | |
| TATTTCCACACATGATGCAA+TGG | - | chr3.1:91827505-91827524 | MS.gene069968:CDS | 35.0% | |
| TCATGTGTGGAAATATATGC+AGG | + | chr3.1:91827500-91827519 | None:intergenic | 35.0% | |
| TGATCTCTTTCATCCTGTTT+GGG | - | chr3.1:91831122-91831141 | MS.gene069968:CDS | 35.0% | |
| TTCTGGATCTAAATCGAATG+TGG | - | chr3.1:91827436-91827455 | MS.gene069968:CDS | 35.0% | |
| TTTGGCATAAAAGATTCACG+TGG | + | chr3.1:91830350-91830369 | None:intergenic | 35.0% | |
| ! | AGATAATTGCTCATCGACTA+TGG | - | chr3.1:91827744-91827763 | MS.gene069968:CDS | 35.0% |
| ! | ATCACACAACTTTTCTCTCT+TGG | + | chr3.1:91829025-91829044 | None:intergenic | 35.0% |
| ! | CTGGTATCTGTGTATTTTTC+AGG | - | chr3.1:91831330-91831349 | MS.gene069968:CDS | 35.0% |
| ! | GCTGTTCAATTTGGTTCAAA+AGG | - | chr3.1:91830907-91830926 | MS.gene069968:intron | 35.0% |
| ! | TAGTTTGTGTCATACCATTC+AGG | + | chr3.1:91830814-91830833 | None:intergenic | 35.0% |
| ! | TATGTCTAAGGTTCAACTCT+TGG | - | chr3.1:91828567-91828586 | MS.gene069968:CDS | 35.0% |
| ! | TGTTTTCATATGGACATGGT+TGG | - | chr3.1:91827535-91827554 | MS.gene069968:intron | 35.0% |
| ! | TTTTCACTCTCATGCTTCTA+GGG | - | chr3.1:91829835-91829854 | MS.gene069968:intron | 35.0% |
| ! | TTTTTCACTCTCATGCTTCT+AGG | - | chr3.1:91829834-91829853 | MS.gene069968:intron | 35.0% |
| !! | AAATTGTTTGGTGCATTTGC+AGG | - | chr3.1:91830761-91830780 | MS.gene069968:intron | 35.0% |
| !! | AATTGTTTGGTGCATTTGCA+GGG | - | chr3.1:91830762-91830781 | MS.gene069968:intron | 35.0% |
| !! | GGATCCAGAAATTTTGAAAG+TGG | - | chr3.1:91828119-91828138 | MS.gene069968:intron | 35.0% |
| !! | GTCTTTTTGCATCTGAAACA+AGG | - | chr3.1:91827639-91827658 | MS.gene069968:intron | 35.0% |
| !! | TCCAGAAATTTTGAAAGTGG+GGG | - | chr3.1:91828122-91828141 | MS.gene069968:intron | 35.0% |
| !! | TTTTGGAAACCATGCAACTT+TGG | - | chr3.1:91830209-91830228 | MS.gene069968:intron | 35.0% |
| !! | TTTTGGCTGTGATCTTAAGT+GGG | - | chr3.1:91827881-91827900 | MS.gene069968:intron | 35.0% |
| !!! | ATCTGTGTATTTTTCAGGGA+AGG | - | chr3.1:91831335-91831354 | MS.gene069968:CDS | 35.0% |
| !!! | ATTTTGGCTGTGATCTTAAG+TGG | - | chr3.1:91827880-91827899 | MS.gene069968:intron | 35.0% |
| AAACACCTTTCACATCACCA+CGG | + | chr3.1:91830191-91830210 | None:intergenic | 40.0% | |
| AAACTTAGTGGGATAAGGCT+TGG | - | chr3.1:91829327-91829346 | MS.gene069968:intron | 40.0% | |
| AAGGCAAACATGGTGAATCA+AGG | + | chr3.1:91830726-91830745 | None:intergenic | 40.0% | |
| ACACATGATGCAATGGAAAC+CGG | - | chr3.1:91827512-91827531 | MS.gene069968:CDS | 40.0% | |
| ACCTATAGTAGAAATGGTGG+CGG | - | chr3.1:91828032-91828051 | MS.gene069968:intron | 40.0% | |
| ACTAAGTTTGGTCGGCTAAA+TGG | + | chr3.1:91829316-91829335 | None:intergenic | 40.0% | |
| ACTACTTATCTTGTCCCTGT+AGG | - | chr3.1:91829704-91829723 | MS.gene069968:intron | 40.0% | |
| ACTCTTGGCTCCAACAAATT+TGG | - | chr3.1:91828582-91828601 | MS.gene069968:CDS | 40.0% | |
| AGCACCTATAGTAGAAATGG+TGG | - | chr3.1:91828029-91828048 | MS.gene069968:intron | 40.0% | |
| AGCCCAACAATACACTTAGA+TGG | + | chr3.1:91830013-91830032 | None:intergenic | 40.0% | |
| AGTCCAAAGAAAGGCAAACA+TGG | + | chr3.1:91830736-91830755 | None:intergenic | 40.0% | |
| ATAAGCAAACCAACCCAATG+CGG | + | chr3.1:91830788-91830807 | None:intergenic | 40.0% | |
| ATGCTGTTGGCAGAGAAAAA+CGG | - | chr3.1:91831160-91831179 | MS.gene069968:CDS | 40.0% | |
| ATGGACAATTGATACCAAGC+GGG | - | chr3.1:91827616-91827635 | MS.gene069968:intron | 40.0% | |
| ATTGCTTTATCAGTGCCTCT+AGG | - | chr3.1:91831431-91831450 | MS.gene069968:CDS | 40.0% | |
| ATTTAGCCGACCAAACTTAG+TGG | - | chr3.1:91829315-91829334 | MS.gene069968:intron | 40.0% | |
| CAAATGGAGAACTATGCTGT+TGG | - | chr3.1:91831147-91831166 | MS.gene069968:CDS | 40.0% | |
| CATCTACTCTCCTTATAACC+AGG | + | chr3.1:91829157-91829176 | None:intergenic | 40.0% | |
| CCATGTCCATATGAAAACAC+CGG | + | chr3.1:91827534-91827553 | None:intergenic | 40.0% | |
| CTAGTAAATATACTGAGGGC+CGG | - | chr3.1:91828389-91828408 | MS.gene069968:intron | 40.0% | |
| CTTATCCCACTAAGTTTGGT+CGG | + | chr3.1:91829324-91829343 | None:intergenic | 40.0% | |
| CTTTAGGCCTCTAAACTTGT+TGG | - | chr3.1:91828670-91828689 | MS.gene069968:CDS | 40.0% | |
| GATATTTCAGGAAATGACCG+AGG | - | chr3.1:91830523-91830542 | MS.gene069968:intron | 40.0% | |
| GATCTCTTTCATCCTGTTTG+GGG | - | chr3.1:91831123-91831142 | MS.gene069968:CDS | 40.0% | |
| GCCCAACAATACACTTAGAT+GGG | + | chr3.1:91830012-91830031 | None:intergenic | 40.0% | |
| GGAAAATAGCTTAGGTGGTT+TGG | - | chr3.1:91828053-91828072 | MS.gene069968:intron | 40.0% | |
| GGATCTAAATCGAATGTGGA+GGG | - | chr3.1:91827440-91827459 | MS.gene069968:CDS | 40.0% | |
| GGTAGCACCTATAGTAGAAA+TGG | - | chr3.1:91828026-91828045 | MS.gene069968:intron | 40.0% | |
| GGTATTTGAAAGATCAGGAC+AGG | + | chr3.1:91831311-91831330 | None:intergenic | 40.0% | |
| GTCCTGATCTTTCAAATACC+TGG | - | chr3.1:91831311-91831330 | MS.gene069968:CDS | 40.0% | |
| TAAGTGTATTGTTGGGCTGT+TGG | - | chr3.1:91830015-91830034 | MS.gene069968:intron | 40.0% | |
| TCACCATGTTTGCCTTTCTT+TGG | - | chr3.1:91830730-91830749 | MS.gene069968:intron | 40.0% | |
| TGAACGAATTAGTGAGGGAA+AGG | - | chr3.1:91828831-91828850 | MS.gene069968:intron | 40.0% | |
| TGACCATCTAAAAGTGAAGC+AGG | + | chr3.1:91830235-91830254 | None:intergenic | 40.0% | |
| TGGATCTAAATCGAATGTGG+AGG | - | chr3.1:91827439-91827458 | MS.gene069968:CDS | 40.0% | |
| TTCTCCAAGCCAAAAGTTTG+AGG | + | chr3.1:91828450-91828469 | None:intergenic | 40.0% | |
| TTGACGGCATTGTTAAGTCA+AGG | + | chr3.1:91830398-91830417 | None:intergenic | 40.0% | |
| TTTAGCCGACCAAACTTAGT+GGG | - | chr3.1:91829316-91829335 | MS.gene069968:intron | 40.0% | |
| TTTGTAGATGACCCTGAAAC+TGG | + | chr3.1:91829878-91829897 | None:intergenic | 40.0% | |
| ! | AAGCCTTATCCCACTAAGTT+TGG | + | chr3.1:91829328-91829347 | None:intergenic | 40.0% |
| ! | ATGGATTGAAGTGCTTGAAG+AGG | - | chr3.1:91829593-91829612 | MS.gene069968:intron | 40.0% |
| ! | TGGAAACCGGTGTTTTCATA+TGG | - | chr3.1:91827525-91827544 | MS.gene069968:CDS | 40.0% |
| ! | TGGATTGAAGTGCTTGAAGA+GGG | - | chr3.1:91829594-91829613 | MS.gene069968:intron | 40.0% |
| ! | TTTCTGGTGTTCTGGATGAT+TGG | - | chr3.1:91829505-91829524 | MS.gene069968:intron | 40.0% |
| !! | AAAAGTTGTGTGATGGGTGT+AGG | - | chr3.1:91829031-91829050 | MS.gene069968:CDS | 40.0% |
| !! | AGCTTGTTGATGCATGGTTA+TGG | - | chr3.1:91827597-91827616 | MS.gene069968:intron | 40.0% |
| !! | CATCTGAAACAAGGTACTGT+GGG | - | chr3.1:91827648-91827667 | MS.gene069968:CDS | 40.0% |
| !! | GGCACTGATAAAGCAATCTT+TGG | + | chr3.1:91831428-91831447 | None:intergenic | 40.0% |
| !!! | GGTGATGTGAAAGGTGTTTT+TGG | - | chr3.1:91830192-91830211 | MS.gene069968:intron | 40.0% |
| AACTTCTCCGTCTTCTTTGC+TGG | - | chr3.1:91827471-91827490 | MS.gene069968:CDS | 45.0% | |
| AAGGAGAGTAGATGCAATGG+AGG | - | chr3.1:91829163-91829182 | MS.gene069968:intron | 45.0% | |
| AAGGCGTGAACGAATTAGTG+AGG | - | chr3.1:91828825-91828844 | MS.gene069968:intron | 45.0% | |
| ACATGAAGCTGATAGGCTTG+AGG | - | chr3.1:91831209-91831228 | MS.gene069968:CDS | 45.0% | |
| ACTCTCCTTATAACCAGGGA+CGG | + | chr3.1:91829152-91829171 | None:intergenic | 45.0% | |
| ACTTATCTTGTCCCTGTAGG+CGG | - | chr3.1:91829707-91829726 | MS.gene069968:intron | 45.0% | |
| AGAGAGAGAGAGAGAGAGTT+GGG | - | chr3.1:91828004-91828023 | MS.gene069968:intron | 45.0% | |
| AGGCGTGAACGAATTAGTGA+GGG | - | chr3.1:91828826-91828845 | MS.gene069968:intron | 45.0% | |
| AGTTCGGGTAGCACCTATAT+GGG | - | chr3.1:91827950-91827969 | MS.gene069968:CDS | 45.0% | |
| ATGCATCAACAAGCTCAGCA+AGG | + | chr3.1:91827592-91827611 | None:intergenic | 45.0% | |
| CACAGTTAACACTGCGAACA+TGG | - | chr3.1:91829574-91829593 | MS.gene069968:intron | 45.0% | |
| CATATTGTGTACCCACCAGT+TGG | + | chr3.1:91828710-91828729 | None:intergenic | 45.0% | |
| CGACCAAACTTAGTGGGATA+AGG | - | chr3.1:91829322-91829341 | MS.gene069968:intron | 45.0% | |
| CTTTCACATCACCACGGTAA+GGG | + | chr3.1:91830185-91830204 | None:intergenic | 45.0% | |
| GCAAGAAGAGACGTTGAACA+AGG | + | chr3.1:91830150-91830169 | None:intergenic | 45.0% | |
| GCCCCCACTTTCAAAATTTC+TGG | + | chr3.1:91828126-91828145 | None:intergenic | 45.0% | |
| GCTAAAAAGCCCAGTGTAAG+CGG | + | chr3.1:91830997-91831016 | None:intergenic | 45.0% | |
| GGTTTCCATTGCATCATGTG+TGG | + | chr3.1:91827513-91827532 | None:intergenic | 45.0% | |
| GTGATAGTTGACCACACACA+TGG | + | chr3.1:91829057-91829076 | None:intergenic | 45.0% | |
| GTTCAACGTCTCTTCTTGCA+TGG | - | chr3.1:91830151-91830170 | MS.gene069968:intron | 45.0% | |
| TCCGCCACCATTTCTACTAT+AGG | + | chr3.1:91828036-91828055 | None:intergenic | 45.0% | |
| TGCTCAACGAGATCAATCTG+AGG | + | chr3.1:91827725-91827744 | None:intergenic | 45.0% | |
| TGCTGGAAGATCGGATCTAT+CGG | - | chr3.1:91829919-91829938 | MS.gene069968:intron | 45.0% | |
| TGGACAATTGATACCAAGCG+GGG | - | chr3.1:91827617-91827636 | MS.gene069968:intron | 45.0% | |
| TGGTTTCAATTCCCTTACCG+TGG | - | chr3.1:91830171-91830190 | MS.gene069968:intron | 45.0% | |
| TGTATCCGTCCCTGGTTATA+AGG | - | chr3.1:91829144-91829163 | MS.gene069968:CDS | 45.0% | |
| TTAGATTTACAAGGCGGTCG+TGG | + | chr3.1:91829405-91829424 | None:intergenic | 45.0% | |
| TTCTCCATTTGACCCCAAAC+AGG | + | chr3.1:91831138-91831157 | None:intergenic | 45.0% | |
| ! | ATTGCTCATCGACTATGGCT+TGG | - | chr3.1:91827749-91827768 | MS.gene069968:CDS | 45.0% |
| ! | CCGGTGTTTTCATATGGACA+TGG | - | chr3.1:91827531-91827550 | MS.gene069968:intron | 45.0% |
| ! | CTAAGCCCCCAAAAGCATAT+TGG | + | chr3.1:91830273-91830292 | None:intergenic | 45.0% |
| ! | CTGCGTGCCAATATGCTTTT+GGG | - | chr3.1:91830263-91830282 | MS.gene069968:intron | 45.0% |
| ! | GGTTTGCTTATGAGCCTGAA+TGG | - | chr3.1:91830797-91830816 | MS.gene069968:intron | 45.0% |
| ! | TACCCACCAGTTGGTATACA+GGG | + | chr3.1:91828701-91828720 | None:intergenic | 45.0% |
| ! | TCAATCTGAGGCTGTGATTC+AGG | + | chr3.1:91827713-91827732 | None:intergenic | 45.0% |
| ! | TCATCCTGTTTGGGGTCAAA+TGG | - | chr3.1:91831131-91831150 | MS.gene069968:CDS | 45.0% |
| ! | TCTGCGTGCCAATATGCTTT+TGG | - | chr3.1:91830262-91830281 | MS.gene069968:intron | 45.0% |
| ! | TGCGTGCCAATATGCTTTTG+GGG | - | chr3.1:91830264-91830283 | MS.gene069968:intron | 45.0% |
| !! | ATGCTTTTGGGGGCTTAGAT+GGG | - | chr3.1:91830275-91830294 | MS.gene069968:intron | 45.0% |
| !! | ATGGTGGCGGAAAATAGCTT+AGG | - | chr3.1:91828045-91828064 | MS.gene069968:intron | 45.0% |
| !! | GAGAGTGAAAAAAGTGCCAG+TGG | + | chr3.1:91829826-91829845 | None:intergenic | 45.0% |
| !! | GCATCTGAAACAAGGTACTG+TGG | - | chr3.1:91827647-91827666 | MS.gene069968:CDS | 45.0% |
| !! | TAGGCCTCAAACTTTTGGCT+TGG | - | chr3.1:91828443-91828462 | MS.gene069968:intron | 45.0% |
| !! | TATGCTTTTGGGGGCTTAGA+TGG | - | chr3.1:91830274-91830293 | MS.gene069968:intron | 45.0% |
| !! | TGGCCTGCTTCACTTTTAGA+TGG | - | chr3.1:91830229-91830248 | MS.gene069968:intron | 45.0% |
| !! | TGTATTGGTTGGGAACCTAG+AGG | + | chr3.1:91831449-91831468 | None:intergenic | 45.0% |
| !! | TTGCTGAGCTTGTTGATGCA+TGG | - | chr3.1:91827591-91827610 | MS.gene069968:intron | 45.0% |
| !!! | GGCTTTAGGCCTCAAACTTT+TGG | - | chr3.1:91828438-91828457 | MS.gene069968:intron | 45.0% |
| AAGCTGATAGGCTTGAGGTC+TGG | - | chr3.1:91831214-91831233 | MS.gene069968:CDS | 50.0% | |
| AGATGCAAAAAGACCCCGCT+TGG | + | chr3.1:91827633-91827652 | None:intergenic | 50.0% | |
| AGCTGATAGGCTTGAGGTCT+GGG | - | chr3.1:91831215-91831234 | MS.gene069968:CDS | 50.0% | |
| CAGGACACCAGCAAAGAAGA+CGG | + | chr3.1:91827481-91827500 | None:intergenic | 50.0% | |
| CCTTTCACATCACCACGGTA+AGG | + | chr3.1:91830186-91830205 | None:intergenic | 50.0% | |
| CTGTTGGCAGAGAAAAACGG+AGG | - | chr3.1:91831163-91831182 | MS.gene069968:CDS | 50.0% | |
| CTTCTCGGTAGGATGTTGCA+GGG | - | chr3.1:91829759-91829778 | MS.gene069968:intron | 50.0% | |
| GAGAGAGAGAGAGAGAGAGT+TGG | - | chr3.1:91828003-91828022 | MS.gene069968:intron | 50.0% | |
| GAGAGAGAGAGAGAGAGTTG+GGG | - | chr3.1:91828005-91828024 | MS.gene069968:intron | 50.0% | |
| GAGGATAGTCAGATCACGAG+AGG | - | chr3.1:91829182-91829201 | MS.gene069968:intron | 50.0% | |
| GAGTTCGGGTAGCACCTATA+TGG | - | chr3.1:91827949-91827968 | MS.gene069968:CDS | 50.0% | |
| GCACTGAATCCGCTTACACT+GGG | - | chr3.1:91830985-91831004 | MS.gene069968:intron | 50.0% | |
| GTTCAACATGTATCCGTCCC+TGG | - | chr3.1:91829136-91829155 | MS.gene069968:CDS | 50.0% | |
| TACTGCTCCTGCCAGTTTCA+GGG | - | chr3.1:91829864-91829883 | MS.gene069968:intron | 50.0% | |
| TAGATGACCCTGAAACTGGC+AGG | + | chr3.1:91829874-91829893 | None:intergenic | 50.0% | |
| TGAAGCAGGCCAAAGTTGCA+TGG | + | chr3.1:91830221-91830240 | None:intergenic | 50.0% | |
| TGGGAACCCTTTAGCTGATG+TGG | - | chr3.1:91830945-91830964 | MS.gene069968:intron | 50.0% | |
| TTCTCGGTAGGATGTTGCAG+GGG | - | chr3.1:91829760-91829779 | MS.gene069968:intron | 50.0% | |
| ! | AGCACTGAATCCGCTTACAC+TGG | - | chr3.1:91830984-91831003 | MS.gene069968:intron | 50.0% |
| ! | CCTTACCGTGGTGATGTGAA+AGG | - | chr3.1:91830183-91830202 | MS.gene069968:intron | 50.0% |
| ! | GCGTGCCAATATGCTTTTGG+GGG | - | chr3.1:91830265-91830284 | MS.gene069968:intron | 50.0% |
| ! | GTACCCACCAGTTGGTATAC+AGG | + | chr3.1:91828702-91828721 | None:intergenic | 50.0% |
| ! | GTGGCGGAAAATAGCTTAGG+TGG | - | chr3.1:91828048-91828067 | MS.gene069968:intron | 50.0% |
| !! | AAAAAAGTGCCAGTGGCTGC+AGG | + | chr3.1:91829819-91829838 | None:intergenic | 50.0% |
| !! | GGCCTCTAAACTTGTTGGAC+CGG | - | chr3.1:91828675-91828694 | MS.gene069968:CDS | 50.0% |
| !!! | TGAGGCCTTAGTTTTGCAGC+AGG | + | chr3.1:91827674-91827693 | None:intergenic | 50.0% |
| ACATACCAGGACTGCCTTCG+CGG | - | chr3.1:91831397-91831416 | MS.gene069968:CDS | 55.0% | |
| AGGACAAGAGCTCCAAGCTG+AGG | + | chr3.1:91827572-91827591 | None:intergenic | 55.0% | |
| AGGCAACTCTGCTTCTCGGT+AGG | - | chr3.1:91829748-91829767 | MS.gene069968:intron | 55.0% | |
| AGGGGACGACAAAGCTTCCA+TGG | - | chr3.1:91829778-91829797 | MS.gene069968:intron | 55.0% | |
| AGTCAGATCACGAGAGGCAG+AGG | - | chr3.1:91829188-91829207 | MS.gene069968:intron | 55.0% | |
| ATGGGTGTAGGCCATGTGTG+TGG | - | chr3.1:91829043-91829062 | MS.gene069968:CDS | 55.0% | |
| GAGGCCTAAAGCCCTTGCTT+GGG | + | chr3.1:91828431-91828450 | None:intergenic | 55.0% | |
| GCAGAGTTGCCTCCACACTT+TGG | + | chr3.1:91829740-91829759 | None:intergenic | 55.0% | |
| GCTTCTCGGTAGGATGTTGC+AGG | - | chr3.1:91829758-91829777 | MS.gene069968:intron | 55.0% | |
| GGCCCTGTATACCAACTGGT+GGG | - | chr3.1:91828696-91828715 | MS.gene069968:CDS | 55.0% | |
| GGCCGGTCCAACAAGTTTAG+AGG | + | chr3.1:91828680-91828699 | None:intergenic | 55.0% | |
| GGCTTCAGCTGCTGGAAGAT+CGG | - | chr3.1:91829910-91829929 | MS.gene069968:intron | 55.0% | |
| GGGGCTTAGATGGGATGAGT+TGG | - | chr3.1:91830284-91830303 | MS.gene069968:intron | 55.0% | |
| GGTTCGACACCAAAGTGTGG+AGG | - | chr3.1:91829728-91829747 | MS.gene069968:intron | 55.0% | |
| GTACTGCTCCTGCCAGTTTC+AGG | - | chr3.1:91829863-91829882 | MS.gene069968:intron | 55.0% | |
| GTGGAGGCAACTCTGCTTCT+CGG | - | chr3.1:91829744-91829763 | MS.gene069968:intron | 55.0% | |
| GTGGGCCTGCTGCAAAACTA+AGG | - | chr3.1:91827666-91827685 | MS.gene069968:CDS | 55.0% | |
| GTTTCTGCTGCACCTCAGCT+TGG | - | chr3.1:91827557-91827576 | MS.gene069968:intron | 55.0% | |
| TCAAATGGGGCTTCAGCTGC+TGG | - | chr3.1:91829902-91829921 | MS.gene069968:intron | 55.0% | |
| TCACATCATCCTGCAGCCAC+TGG | - | chr3.1:91829807-91829826 | MS.gene069968:intron | 55.0% | |
| TGAGGCCTAAAGCCCTTGCT+TGG | + | chr3.1:91828432-91828451 | None:intergenic | 55.0% | |
| TGCATTTGCAGGGCCGCATT+GGG | - | chr3.1:91830772-91830791 | MS.gene069968:intron | 55.0% | |
| ! | CACCAGTTGGTATACAGGGC+CGG | + | chr3.1:91828697-91828716 | None:intergenic | 55.0% |
| !! | TTGGTGTCGAACCGCCTACA+GGG | + | chr3.1:91829721-91829740 | None:intergenic | 55.0% |
| !! | TTTGGTGTCGAACCGCCTAC+AGG | + | chr3.1:91829722-91829741 | None:intergenic | 55.0% |
| AGGCTGTGATTCAGGCTCCC+CGG | + | chr3.1:91827705-91827724 | None:intergenic | 60.0% | |
| AGGGTCATGTGGCCCAAGCA+AGG | - | chr3.1:91828416-91828435 | MS.gene069968:intron | 60.0% | |
| ATATACTGAGGGCCGGCCCA+AGG | - | chr3.1:91828396-91828415 | MS.gene069968:intron | 60.0% | |
| CGGCCCTGTATACCAACTGG+TGG | - | chr3.1:91828695-91828714 | MS.gene069968:CDS | 60.0% | |
| GACCGGCCCTGTATACCAAC+TGG | - | chr3.1:91828692-91828711 | MS.gene069968:CDS | 60.0% | |
| GCTTGGGCCACATGACCCTT+GGG | + | chr3.1:91828415-91828434 | None:intergenic | 60.0% | |
| GGCGGTTCGACACCAAAGTG+TGG | - | chr3.1:91829725-91829744 | MS.gene069968:intron | 60.0% | |
| GGGTCATGTGGCCCAAGCAA+GGG | - | chr3.1:91828417-91828436 | MS.gene069968:intron | 60.0% | |
| GTGCATTTGCAGGGCCGCAT+TGG | - | chr3.1:91830771-91830790 | MS.gene069968:intron | 60.0% | |
| GTGGCCCAAGCAAGGGCTTT+AGG | - | chr3.1:91828424-91828443 | MS.gene069968:intron | 60.0% | |
| TATACTGAGGGCCGGCCCAA+GGG | - | chr3.1:91828397-91828416 | MS.gene069968:intron | 60.0% | |
| TGCTTGGGCCACATGACCCT+TGG | + | chr3.1:91828416-91828435 | None:intergenic | 60.0% | |
| TTTGCAGGGCCGCATTGGGT+TGG | - | chr3.1:91830776-91830795 | MS.gene069968:intron | 60.0% | |
| CTAAGGCCTCACCTGTCCCC+CGG | - | chr3.1:91827683-91827702 | MS.gene069968:CDS | 65.0% | |
| CTGTGATTCAGGCTCCCCGG+GGG | + | chr3.1:91827702-91827721 | None:intergenic | 65.0% | |
| GCTGTGATTCAGGCTCCCCG+GGG | + | chr3.1:91827703-91827722 | None:intergenic | 65.0% | |
| GGCTGTGATTCAGGCTCCCC+GGG | + | chr3.1:91827704-91827723 | None:intergenic | 65.0% | |
| GTCTACCGCGAAGGCAGTCC+TGG | + | chr3.1:91831405-91831424 | None:intergenic | 65.0% | |
| TAAGGCCTCACCTGTCCCCC+GGG | - | chr3.1:91827684-91827703 | MS.gene069968:CDS | 65.0% | |
| AAGGCCTCACCTGTCCCCCG+GGG | - | chr3.1:91827685-91827704 | MS.gene069968:CDS | 70.0% | |
| ATTCAGGCTCCCCGGGGGAC+AGG | + | chr3.1:91827697-91827716 | None:intergenic | 70.0% | |
| GGGCCACATGACCCTTGGGC+CGG | + | chr3.1:91828411-91828430 | None:intergenic | 70.0% | |
| GGGCCGGCCCAAGGGTCATG+TGG | - | chr3.1:91828405-91828424 | MS.gene069968:intron | 75.0% | |
| ! | GGCTCCCCGGGGGACAGGTG+AGG | + | chr3.1:91827692-91827711 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 91827425 | 91831475 | 91827425 | ID=MS.gene069968 |
| chr3.1 | mRNA | 91827425 | 91831475 | 91827425 | ID=MS.gene069968.t1;Parent=MS.gene069968 |
| chr3.1 | exon | 91831107 | 91831475 | 91831107 | ID=MS.gene069968.t1.exon1;Parent=MS.gene069968.t1 |
| chr3.1 | CDS | 91831107 | 91831475 | 91831107 | ID=cds.MS.gene069968.t1;Parent=MS.gene069968.t1 |
| chr3.1 | exon | 91828960 | 91829174 | 91828960 | ID=MS.gene069968.t1.exon2;Parent=MS.gene069968.t1 |
| chr3.1 | CDS | 91828960 | 91829174 | 91828960 | ID=cds.MS.gene069968.t1;Parent=MS.gene069968.t1 |
| chr3.1 | exon | 91828550 | 91828805 | 91828550 | ID=MS.gene069968.t1.exon3;Parent=MS.gene069968.t1 |
| chr3.1 | CDS | 91828550 | 91828805 | 91828550 | ID=cds.MS.gene069968.t1;Parent=MS.gene069968.t1 |
| chr3.1 | exon | 91828347 | 91828379 | 91828347 | ID=MS.gene069968.t1.exon4;Parent=MS.gene069968.t1 |
| chr3.1 | CDS | 91828347 | 91828379 | 91828347 | ID=cds.MS.gene069968.t1;Parent=MS.gene069968.t1 |
| chr3.1 | exon | 91828206 | 91828245 | 91828206 | ID=MS.gene069968.t1.exon5;Parent=MS.gene069968.t1 |
| chr3.1 | CDS | 91828206 | 91828245 | 91828206 | ID=cds.MS.gene069968.t1;Parent=MS.gene069968.t1 |
| chr3.1 | exon | 91828082 | 91828117 | 91828082 | ID=MS.gene069968.t1.exon6;Parent=MS.gene069968.t1 |
| chr3.1 | CDS | 91828082 | 91828117 | 91828082 | ID=cds.MS.gene069968.t1;Parent=MS.gene069968.t1 |
| chr3.1 | exon | 91827934 | 91827998 | 91827934 | ID=MS.gene069968.t1.exon7;Parent=MS.gene069968.t1 |
| chr3.1 | CDS | 91827934 | 91827998 | 91827934 | ID=cds.MS.gene069968.t1;Parent=MS.gene069968.t1 |
| chr3.1 | exon | 91827644 | 91827780 | 91827644 | ID=MS.gene069968.t1.exon8;Parent=MS.gene069968.t1 |
| chr3.1 | CDS | 91827644 | 91827780 | 91827644 | ID=cds.MS.gene069968.t1;Parent=MS.gene069968.t1 |
| chr3.1 | exon | 91827425 | 91827548 | 91827425 | ID=MS.gene069968.t1.exon9;Parent=MS.gene069968.t1 |
| chr3.1 | CDS | 91827425 | 91827548 | 91827425 | ID=cds.MS.gene069968.t1;Parent=MS.gene069968.t1 |
| Gene Sequence |
| Protein sequence |
