Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070016.t1 | XP_013462281.1 | 96.8 | 909 | 29 | 0 | 1 | 909 | 1 | 909 | 0.00E+00 | 1718.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070016.t1 | Q9LE38 | 49.2 | 891 | 374 | 20 | 21 | 900 | 7 | 829 | 6.2e-203 | 709.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070016.t1 | A0A072V3U8 | 96.8 | 909 | 29 | 0 | 1 | 909 | 1 | 909 | 0.0e+00 | 1718.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene070016.t1 | TF | RWP-RK |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene064839 | MS.gene070016 | PPI |
| MS.gene070016 | MS.gene69323 | PPI |
| MS.gene014342 | MS.gene070016 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070016.t1 | MTR_3g115400 | 97.580 | 909 | 22 | 0 | 1 | 909 | 1 | 909 | 0.0 | 1840 |
| MS.gene070016.t1 | MTR_0022s0430 | 36.057 | 918 | 476 | 27 | 20 | 907 | 17 | 853 | 2.00e-149 | 463 |
| MS.gene070016.t1 | MTR_0022s0430 | 38.131 | 792 | 409 | 21 | 143 | 907 | 1 | 738 | 1.46e-145 | 449 |
| MS.gene070016.t1 | MTR_1g100970 | 42.241 | 580 | 300 | 11 | 135 | 701 | 40 | 597 | 2.32e-135 | 427 |
| MS.gene070016.t1 | MTR_1g100970 | 45.946 | 74 | 39 | 1 | 818 | 891 | 806 | 878 | 3.38e-13 | 74.3 |
| MS.gene070016.t1 | MTR_1g100970 | 42.241 | 580 | 300 | 11 | 135 | 701 | 120 | 677 | 7.75e-135 | 428 |
| MS.gene070016.t1 | MTR_1g100970 | 45.946 | 74 | 39 | 1 | 818 | 891 | 886 | 958 | 4.36e-13 | 73.9 |
| MS.gene070016.t1 | MTR_4g068000 | 33.748 | 803 | 444 | 22 | 138 | 896 | 146 | 904 | 4.59e-125 | 400 |
| MS.gene070016.t1 | MTR_2g099350 | 40.219 | 547 | 277 | 14 | 134 | 665 | 167 | 678 | 4.04e-118 | 383 |
| MS.gene070016.t1 | MTR_5g099060 | 40.000 | 475 | 218 | 14 | 29 | 487 | 27 | 450 | 2.07e-85 | 294 |
| MS.gene070016.t1 | MTR_5g099060 | 46.349 | 315 | 156 | 6 | 584 | 895 | 607 | 911 | 7.36e-69 | 247 |
| MS.gene070016.t1 | MTR_1g100970 | 41.895 | 401 | 202 | 8 | 314 | 701 | 7 | 389 | 2.60e-81 | 277 |
| MS.gene070016.t1 | MTR_1g100970 | 45.946 | 74 | 39 | 1 | 818 | 891 | 598 | 670 | 1.71e-13 | 75.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070016.t1 | AT1G20640 | 48.600 | 893 | 376 | 21 | 21 | 900 | 7 | 829 | 0.0 | 723 |
| MS.gene070016.t1 | AT1G20640 | 48.600 | 893 | 376 | 21 | 21 | 900 | 7 | 829 | 0.0 | 723 |
| MS.gene070016.t1 | AT1G20640 | 48.600 | 893 | 376 | 21 | 21 | 900 | 7 | 829 | 0.0 | 723 |
| MS.gene070016.t1 | AT1G76350 | 46.075 | 879 | 361 | 17 | 25 | 892 | 11 | 787 | 0.0 | 703 |
| MS.gene070016.t1 | AT1G76350 | 46.075 | 879 | 361 | 17 | 25 | 892 | 11 | 787 | 0.0 | 703 |
| MS.gene070016.t1 | AT1G76350 | 46.075 | 879 | 361 | 17 | 25 | 892 | 11 | 787 | 0.0 | 703 |
| MS.gene070016.t1 | AT1G76350 | 46.075 | 879 | 361 | 17 | 25 | 892 | 11 | 787 | 0.0 | 703 |
| MS.gene070016.t1 | AT4G35270 | 42.463 | 942 | 459 | 20 | 23 | 899 | 23 | 946 | 0.0 | 668 |
| MS.gene070016.t1 | AT4G35270 | 42.463 | 942 | 459 | 20 | 23 | 899 | 23 | 946 | 0.0 | 668 |
| MS.gene070016.t1 | AT4G35270 | 42.463 | 942 | 459 | 20 | 23 | 899 | 23 | 946 | 0.0 | 668 |
| MS.gene070016.t1 | AT4G35270 | 42.463 | 942 | 459 | 20 | 23 | 899 | 23 | 946 | 0.0 | 668 |
| MS.gene070016.t1 | AT2G17150 | 41.575 | 914 | 452 | 18 | 23 | 899 | 27 | 895 | 0.0 | 638 |
| MS.gene070016.t1 | AT2G17150 | 41.575 | 914 | 452 | 18 | 23 | 899 | 27 | 895 | 0.0 | 638 |
| MS.gene070016.t1 | AT1G64530 | 36.679 | 807 | 392 | 19 | 126 | 893 | 92 | 818 | 1.77e-147 | 457 |
| MS.gene070016.t1 | AT2G17150 | 41.150 | 661 | 329 | 13 | 276 | 899 | 3 | 640 | 9.55e-144 | 441 |
| MS.gene070016.t1 | AT4G24020 | 35.689 | 849 | 425 | 24 | 139 | 907 | 147 | 954 | 1.59e-137 | 434 |
| MS.gene070016.t1 | AT1G64530 | 36.821 | 736 | 350 | 16 | 196 | 893 | 5 | 663 | 1.53e-135 | 421 |
| MS.gene070016.t1 | AT2G17150 | 39.394 | 627 | 320 | 12 | 23 | 615 | 27 | 627 | 7.95e-134 | 416 |
| MS.gene070016.t1 | AT2G17150 | 39.365 | 630 | 319 | 13 | 23 | 615 | 27 | 630 | 1.42e-132 | 412 |
| MS.gene070016.t1 | AT2G17150 | 39.365 | 630 | 319 | 13 | 23 | 615 | 27 | 630 | 1.42e-132 | 412 |
| MS.gene070016.t1 | AT2G43500 | 39.963 | 543 | 281 | 13 | 138 | 671 | 162 | 668 | 7.71e-121 | 390 |
| MS.gene070016.t1 | AT2G43500 | 39.963 | 543 | 281 | 13 | 138 | 671 | 162 | 668 | 7.71e-121 | 390 |
| MS.gene070016.t1 | AT2G43500 | 39.963 | 543 | 281 | 13 | 138 | 671 | 162 | 668 | 7.71e-121 | 390 |
| MS.gene070016.t1 | AT2G43500 | 39.963 | 543 | 281 | 13 | 138 | 671 | 162 | 668 | 7.71e-121 | 390 |
| MS.gene070016.t1 | AT2G43500 | 39.963 | 543 | 281 | 13 | 138 | 671 | 162 | 668 | 7.71e-121 | 390 |
| MS.gene070016.t1 | AT2G43500 | 39.963 | 543 | 281 | 13 | 138 | 671 | 162 | 668 | 7.71e-121 | 390 |
| MS.gene070016.t1 | AT2G43500 | 39.963 | 543 | 281 | 13 | 138 | 671 | 162 | 668 | 7.71e-121 | 390 |
| MS.gene070016.t1 | AT2G43500 | 39.963 | 543 | 281 | 13 | 138 | 671 | 162 | 668 | 7.71e-121 | 390 |
| MS.gene070016.t1 | AT2G43500 | 39.209 | 556 | 280 | 14 | 138 | 671 | 162 | 681 | 9.17e-118 | 382 |
| MS.gene070016.t1 | AT2G43500 | 39.209 | 556 | 280 | 14 | 138 | 671 | 162 | 681 | 9.17e-118 | 382 |
| MS.gene070016.t1 | AT2G43500 | 38.849 | 556 | 282 | 14 | 138 | 671 | 162 | 681 | 2.17e-116 | 378 |
| MS.gene070016.t1 | AT4G24020 | 34.318 | 711 | 350 | 21 | 277 | 907 | 1 | 674 | 1.16e-95 | 316 |
| MS.gene070016.t1 | AT4G38340 | 40.000 | 340 | 185 | 7 | 137 | 473 | 41 | 364 | 3.12e-70 | 247 |
| MS.gene070016.t1 | AT4G38340 | 77.381 | 84 | 19 | 0 | 585 | 668 | 419 | 502 | 5.17e-34 | 140 |
| MS.gene070016.t1 | AT4G38340 | 49.462 | 93 | 41 | 3 | 807 | 896 | 597 | 686 | 9.33e-16 | 82.4 |
| MS.gene070016.t1 | AT4G38340 | 40.000 | 340 | 185 | 7 | 137 | 473 | 112 | 435 | 1.93e-69 | 246 |
| MS.gene070016.t1 | AT4G38340 | 77.381 | 84 | 19 | 0 | 585 | 668 | 490 | 573 | 8.96e-34 | 140 |
| MS.gene070016.t1 | AT4G38340 | 49.462 | 93 | 41 | 3 | 807 | 896 | 668 | 757 | 1.09e-15 | 82.4 |
Find 220 sgRNAs with CRISPR-Local
Find 309 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAATTCGATATCAAATATT+TGG | 0.153465 | 3.1:+91327514 | MS.gene070016:CDS |
| AAGATATGCTTATACAAATA+TGG | 0.190554 | 3.1:+91324144 | MS.gene070016:CDS |
| GTTTCCTGGCTTTGTGATCT+TGG | 0.257901 | 3.1:-91327296 | None:intergenic |
| GACCTTGATTCAAGTGAAAA+AGG | 0.270581 | 3.1:-91324218 | None:intergenic |
| GACTCGGTTCAAGGTGCCTC+TGG | 0.272348 | 3.1:+91326909 | MS.gene070016:CDS |
| GTTTGCCTGGTCGAGTTTAT+AGG | 0.274228 | 3.1:+91324324 | MS.gene070016:CDS |
| TCTTCATAACACCAATTCTT+TGG | 0.279461 | 3.1:-91327446 | None:intergenic |
| CCATAACAGAGAAGCTGATT+AGG | 0.284422 | 3.1:+91324087 | MS.gene070016:CDS |
| CTTGATTCAGAGTTGAGATT+AGG | 0.293147 | 3.1:-91327001 | None:intergenic |
| TCTCATCATGCCAGGTTGTT+TGG | 0.296000 | 3.1:+91325384 | MS.gene070016:CDS |
| CTTGCGAGTTATAACAAATA+AGG | 0.307272 | 3.1:+91325563 | MS.gene070016:CDS |
| TTGATTTATTATCTTGAATC+AGG | 0.308616 | 3.1:-91327265 | None:intergenic |
| GGTAATTTCTTGTCAAGTTT+GGG | 0.309321 | 3.1:+91325822 | MS.gene070016:CDS |
| GGGTAATTTCTTGTCAAGTT+TGG | 0.312500 | 3.1:+91325821 | MS.gene070016:CDS |
| GGTGATTTCGATGCACCTTC+AGG | 0.318756 | 3.1:-91327074 | None:intergenic |
| AACTTGTGATGCAGATTTAG+AGG | 0.322889 | 3.1:+91327562 | MS.gene070016:CDS |
| AGAACTCCTGATAAAATTAC+TGG | 0.324430 | 3.1:-91327645 | None:intergenic |
| AATTCTTTGGCAACCTAAAC+CGG | 0.326494 | 3.1:-91327433 | None:intergenic |
| GTGATGGCCGTTGCTGATAT+TGG | 0.327958 | 3.1:+91325618 | MS.gene070016:CDS |
| TTGATTCAGAGTTGAGATTA+GGG | 0.328089 | 3.1:-91327000 | None:intergenic |
| CAAGAAAATCTTACTTTAAG+AGG | 0.331533 | 3.1:+91325759 | MS.gene070016:CDS |
| TTCATTCTCTTGGCCTGCCT+TGG | 0.333817 | 3.1:+91323866 | MS.gene070016:CDS |
| GGTGTTCACCAAGTGTTTCC+TGG | 0.335547 | 3.1:-91327310 | None:intergenic |
| GTATTAAGCGTTGGCCTTCT+CGG | 0.340723 | 3.1:+91326838 | MS.gene070016:CDS |
| TCAAAGATTGGATTGGAAAA+AGG | 0.346376 | 3.1:-91323840 | None:intergenic |
| ACAAGGGAGCAGGACATGTT+TGG | 0.349788 | 3.1:+91324463 | MS.gene070016:CDS |
| TTCCTTCTATTCAAAATTCT+CGG | 0.352144 | 3.1:+91326947 | MS.gene070016:CDS |
| CTATCGTCTCCAAATTTATC+AGG | 0.353197 | 3.1:+91326972 | MS.gene070016:CDS |
| ATGGAGCATCACTTGTTAAT+AGG | 0.355386 | 3.1:+91325273 | MS.gene070016:CDS |
| TGTAAGTTTAAGACTCATTT+GGG | 0.359064 | 3.1:+91324005 | MS.gene070016:CDS |
| AAAGATGCTGCAAAGAATAT+TGG | 0.364050 | 3.1:+91325933 | MS.gene070016:CDS |
| GAGTTGGTGGCGGGTTTGCC+TGG | 0.366616 | 3.1:+91324311 | MS.gene070016:CDS |
| AGGGTGGTTCCTGATAAATT+TGG | 0.376289 | 3.1:-91326981 | None:intergenic |
| GAGACGAGAAAACCCGGTTT+AGG | 0.376446 | 3.1:+91327420 | MS.gene070016:CDS |
| GTGTAAGTTTAAGACTCATT+TGG | 0.376447 | 3.1:+91324004 | MS.gene070016:CDS |
| TCTTTGACCCTTCATTCTCT+TGG | 0.378297 | 3.1:+91323856 | MS.gene070016:CDS |
| GAGTGTTCTCCTTCTGTTGA+GGG | 0.378313 | 3.1:+91325801 | MS.gene070016:CDS |
| GTGAAGGGGTTAGTAGGTTG+TGG | 0.382908 | 3.1:+91324027 | MS.gene070016:CDS |
| TTTGCCTGGTCGAGTTTATA+GGG | 0.385793 | 3.1:+91324325 | MS.gene070016:CDS |
| CAAGAGGATGGCTGTCTCAT+TGG | 0.386966 | 3.1:+91325677 | MS.gene070016:CDS |
| CCTAATCAGCTTCTCTGTTA+TGG | 0.387869 | 3.1:-91324087 | None:intergenic |
| GTGGGTCTCTTGCATCCAAC+AGG | 0.388191 | 3.1:+91325140 | MS.gene070016:CDS |
| TTCCAGCGAAATATTGTCTA+AGG | 0.388915 | 3.1:-91325905 | None:intergenic |
| CACCTGATGTTAGATTCTTC+AGG | 0.389748 | 3.1:+91324366 | MS.gene070016:CDS |
| TTAATAGGTCAAGGTGTTGC+CGG | 0.393576 | 3.1:+91325288 | MS.gene070016:CDS |
| CATAGAGTAAAAGTTACATT+TGG | 0.399282 | 3.1:+91327398 | MS.gene070016:CDS |
| ACAACACAGCAGAGCAACTA+TGG | 0.400513 | 3.1:+91324506 | MS.gene070016:CDS |
| AGTTATAACAAATAAGGAAT+TGG | 0.408257 | 3.1:+91325569 | MS.gene070016:CDS |
| CATAACAGAGAAGCTGATTA+GGG | 0.414549 | 3.1:+91324088 | MS.gene070016:CDS |
| GGTTTAGGTTGCCAAAGAAT+TGG | 0.416151 | 3.1:+91327435 | MS.gene070016:CDS |
| CTCGGGTAGTGCGGTTTCAT+AGG | 0.417672 | 3.1:-91325061 | None:intergenic |
| TGCCCCTCCTTGTACTGAAC+AGG | 0.419648 | 3.1:+91323935 | MS.gene070016:CDS |
| GTCTGGTAACAAAGATTCAT+TGG | 0.422317 | 3.1:+91327181 | MS.gene070016:CDS |
| TGCTCGTTGTTCTCCAAGGC+AGG | 0.422575 | 3.1:-91323879 | None:intergenic |
| GAGAATGAAGGGTCAAAGAT+TGG | 0.423559 | 3.1:-91323852 | None:intergenic |
| AGATCATTAGCTCTCAGAAT+TGG | 0.423575 | 3.1:-91324194 | None:intergenic |
| ATTTGGGTGAAGGGGTTAGT+AGG | 0.424980 | 3.1:+91324021 | MS.gene070016:CDS |
| TGGAGCTTCCATCATGGTAT+TGG | 0.425349 | 3.1:-91323709 | None:intergenic |
| GATATCTCACAGAGATTTCT+CGG | 0.426588 | 3.1:-91324259 | None:intergenic |
| CAAGGGAGCAGGACATGTTT+GGG | 0.427327 | 3.1:+91324464 | MS.gene070016:CDS |
| CTCGTCATTGACTCGGTTCA+AGG | 0.434191 | 3.1:+91326900 | MS.gene070016:CDS |
| GGGCTCAACGAATCGGGATC+TGG | 0.434923 | 3.1:-91327053 | None:intergenic |
| TAATAGGTCAAGGTGTTGCC+GGG | 0.435218 | 3.1:+91325289 | MS.gene070016:CDS |
| ACCTTCAGGGCTCAACGAAT+CGG | 0.436452 | 3.1:-91327060 | None:intergenic |
| TGGTTGGAAGCTTCTGCTGA+TGG | 0.437275 | 3.1:+91323792 | MS.gene070016:CDS |
| ACACGGAACATTAGCGGTTC+CGG | 0.438801 | 3.1:+91324433 | MS.gene070016:CDS |
| CGGCTTTCCTGTTCAGTACA+AGG | 0.438876 | 3.1:-91323942 | None:intergenic |
| CTCGTGCCGAACATCATTGC+CGG | 0.439855 | 3.1:-91323904 | None:intergenic |
| GTTGTTGATCTCAGCAGCTC+TGG | 0.440941 | 3.1:+91324916 | MS.gene070016:CDS |
| TTGCTATGTTGGTGATTCTT+CGG | 0.441455 | 3.1:+91325227 | MS.gene070016:CDS |
| CTATCATCCCCTCTATTAAC+CGG | 0.442227 | 3.1:-91324170 | None:intergenic |
| ATTGTCCATGATTATTCAAA+GGG | 0.447950 | 3.1:+91325530 | MS.gene070016:CDS |
| GAAATCCTTGATCCACTTGA+GGG | 0.448167 | 3.1:-91324111 | None:intergenic |
| ATTTGGACGATGATTATGAA+TGG | 0.449463 | 3.1:+91327531 | MS.gene070016:CDS |
| CTCAGAACCTCTTGAATCTC+GGG | 0.451350 | 3.1:-91325078 | None:intergenic |
| GGCTGTATGCTTAATGAGAC+TGG | 0.451702 | 3.1:-91327032 | None:intergenic |
| AGTGGATCAAGGATTTCAAT+AGG | 0.453026 | 3.1:+91324117 | MS.gene070016:CDS |
| AGATATGCTTATACAAATAT+GGG | 0.453741 | 3.1:+91324145 | MS.gene070016:CDS |
| CCTTCAGGGCTCAACGAATC+GGG | 0.455000 | 3.1:-91327059 | None:intergenic |
| GACTCAAAGGAGTTGGTGGC+GGG | 0.455558 | 3.1:+91324302 | MS.gene070016:CDS |
| GGAACATGAATGGCTTGAAT+AGG | 0.455976 | 3.1:-91327120 | None:intergenic |
| TGCAAACAGTCTCAAGTTCA+CGG | 0.457700 | 3.1:-91324529 | None:intergenic |
| CTGAGATACTATAGATGCTT+CGG | 0.458538 | 3.1:-91325434 | None:intergenic |
| CAGCATTATTAACTATAATC+CGG | 0.460364 | 3.1:-91323962 | None:intergenic |
| CATTGTCCATGATTATTCAA+AGG | 0.467851 | 3.1:+91325529 | MS.gene070016:CDS |
| GATCCACCAGGTCCTGGATT+AGG | 0.474573 | 3.1:-91324062 | None:intergenic |
| AGCAACCCGGCAATGATGTT+CGG | 0.474729 | 3.1:+91323898 | MS.gene070016:CDS |
| TGCATCCAACAGGGAAAAGA+TGG | 0.475400 | 3.1:+91325150 | MS.gene070016:CDS |
| TCACTGTCATTGCAATCTAC+AGG | 0.475999 | 3.1:-91325483 | None:intergenic |
| GAGGAGATGTTGACTGTGGT+AGG | 0.478292 | 3.1:+91325778 | MS.gene070016:CDS |
| ACCACAAGATGAAAATTCAA+TGG | 0.483142 | 3.1:+91323731 | MS.gene070016:CDS |
| GAGACCCACGTCTGAGCTAA+AGG | 0.485407 | 3.1:-91325126 | None:intergenic |
| ATGTTGGTGATTCTTCGGTC+AGG | 0.486077 | 3.1:+91325232 | MS.gene070016:CDS |
| GTGTTGTTGCTCTGACAAGC+TGG | 0.486344 | 3.1:-91327141 | None:intergenic |
| ATATGGGTGCCGGTTAATAG+AGG | 0.486599 | 3.1:+91324161 | MS.gene070016:CDS |
| CGGTTAATAGAGGGGATGAT+AGG | 0.488453 | 3.1:+91324171 | MS.gene070016:CDS |
| AGGAGAGAAAAGACGGGCCA+AGG | 0.490415 | 3.1:+91325857 | MS.gene070016:CDS |
| GTCCTTAGACAATATTTCGC+TGG | 0.494295 | 3.1:+91325903 | MS.gene070016:CDS |
| TTTGGACGATGATTATGAAT+GGG | 0.496780 | 3.1:+91327532 | MS.gene070016:CDS |
| GTGATTTCGATGCACCTTCA+GGG | 0.498166 | 3.1:-91327073 | None:intergenic |
| GGTAACAAAGATTCATTGGT+TGG | 0.498700 | 3.1:+91327185 | MS.gene070016:CDS |
| GCACACCCTTTGAATAATCA+TGG | 0.498968 | 3.1:-91325535 | None:intergenic |
| ATGGAAGATCCACCAGGTCC+TGG | 0.499029 | 3.1:-91324068 | None:intergenic |
| TGAAGGGTCAAAGATTGGAT+TGG | 0.499145 | 3.1:-91323847 | None:intergenic |
| CACACAAACAATGTTGCGTC+TGG | 0.501686 | 3.1:+91327164 | MS.gene070016:CDS |
| TCTCAGAACCTCTTGAATCT+CGG | 0.503095 | 3.1:-91325079 | None:intergenic |
| TTAAGACTCATTTGGGTGAA+GGG | 0.507490 | 3.1:+91324012 | MS.gene070016:CDS |
| GGACTCAAAGGAGTTGGTGG+CGG | 0.508229 | 3.1:+91324301 | MS.gene070016:CDS |
| CAACTCTGAAAAGGATCTGC+AGG | 0.508919 | 3.1:+91326808 | MS.gene070016:CDS |
| CCCGATTCGTTGAGCCCTGA+AGG | 0.511003 | 3.1:+91327059 | MS.gene070016:CDS |
| AGGAGATGTTGACTGTGGTA+GGG | 0.511843 | 3.1:+91325779 | MS.gene070016:CDS |
| AGTTTGGGAGTAAATAGAAC+AGG | 0.512927 | 3.1:+91325837 | MS.gene070016:CDS |
| CTGACAAGCTGGAACATGAA+TGG | 0.515320 | 3.1:-91327130 | None:intergenic |
| TCTGTACTACAACTCTGAAA+AGG | 0.515505 | 3.1:+91326799 | MS.gene070016:CDS |
| CACTCGCAAAGCGTCTCAAA+AGG | 0.517406 | 3.1:+91327367 | MS.gene070016:CDS |
| TTTAAGACTCATTTGGGTGA+AGG | 0.517547 | 3.1:+91324011 | MS.gene070016:CDS |
| GGGTTGCTCGTTGTTCTCCA+AGG | 0.518849 | 3.1:-91323883 | None:intergenic |
| GGGTTGCAGACAAAGTTTGA+TGG | 0.518963 | 3.1:-91327621 | None:intergenic |
| CGGATTATAGTTAATAATGC+TGG | 0.519737 | 3.1:+91323963 | MS.gene070016:CDS |
| AGATTTCTCGGTACTTTGCA+AGG | 0.526853 | 3.1:-91324247 | None:intergenic |
| ATCCACTGTCTCATCATGCC+AGG | 0.527462 | 3.1:+91325376 | MS.gene070016:CDS |
| CGGTGTTTGAACAAGGGAGC+AGG | 0.529135 | 3.1:+91324453 | MS.gene070016:CDS |
| GCGGTTCCGGTGTTTGAACA+AGG | 0.534054 | 3.1:+91324446 | MS.gene070016:CDS |
| GTGGAGTATGCTTGCTATGT+TGG | 0.534634 | 3.1:+91325216 | MS.gene070016:CDS |
| TCTTAAACTTACACTGCTGC+AGG | 0.539283 | 3.1:-91323995 | None:intergenic |
| AAGGCAGGCCAAGAGAATGA+AGG | 0.539487 | 3.1:-91323864 | None:intergenic |
| GCTTATACAAATATGGGTGC+CGG | 0.542004 | 3.1:+91324151 | MS.gene070016:CDS |
| AACAGGGAAAAGATGGCTGC+CGG | 0.543888 | 3.1:+91325157 | MS.gene070016:CDS |
| CTCCTGAAGAATCTAACATC+AGG | 0.545399 | 3.1:-91324368 | None:intergenic |
| ACTCGGTTCAAGGTGCCTCT+GGG | 0.547073 | 3.1:+91326910 | MS.gene070016:CDS |
| TGTAATTATCATCAGAGTGC+CGG | 0.547779 | 3.1:-91325176 | None:intergenic |
| TAATAAGGACTTGCGATACT+CGG | 0.548860 | 3.1:-91327339 | None:intergenic |
| CATGCCAAGATCACAAAGCC+AGG | 0.549068 | 3.1:+91327292 | MS.gene070016:CDS |
| TGCTACAGATGTAATTCAGT+CGG | 0.550485 | 3.1:+91325644 | MS.gene070016:CDS |
| GGAGGACTCAAAGGAGTTGG+TGG | 0.551490 | 3.1:+91324298 | MS.gene070016:CDS |
| ATTCTTTGGCAACCTAAACC+GGG | 0.552603 | 3.1:-91327432 | None:intergenic |
| TGAAATCCTTGATCCACTTG+AGG | 0.552895 | 3.1:-91324112 | None:intergenic |
| TAGGGCCCTCAAGTGGATCA+AGG | 0.554118 | 3.1:+91324106 | MS.gene070016:CDS |
| TTTGTTAGATGGTTGTTGGT+TGG | 0.554167 | 3.1:+91323776 | MS.gene070016:CDS |
| CTTATCATCTAATGAAGTGA+TGG | 0.555317 | 3.1:+91325602 | MS.gene070016:CDS |
| CTCTTGAATCTCGGGTAGTG+CGG | 0.556527 | 3.1:-91325070 | None:intergenic |
| TGCAGAGGTGGAGGACTCAA+AGG | 0.557266 | 3.1:+91324289 | MS.gene070016:CDS |
| CATTTGGAGACGAGAAAACC+CGG | 0.558546 | 3.1:+91327414 | MS.gene070016:CDS |
| CCAGGTCCTGGATTAGGCGT+CGG | 0.559684 | 3.1:-91324056 | None:intergenic |
| TAAGACTCATTTGGGTGAAG+GGG | 0.560800 | 3.1:+91324013 | MS.gene070016:CDS |
| GTTTGTCATAAAAGCACCCC+CGG | 0.561641 | 3.1:-91325307 | None:intergenic |
| GGTGGAGGACTCAAAGGAGT+TGG | 0.562364 | 3.1:+91324295 | MS.gene070016:CDS |
| TTACACACACTGTATATCTC+CGG | 0.564968 | 3.1:+91325194 | MS.gene070016:CDS |
| GGAGTGTTCTCCTTCTGTTG+AGG | 0.565245 | 3.1:+91325800 | MS.gene070016:CDS |
| TCGTGCCGAACATCATTGCC+GGG | 0.569558 | 3.1:-91323903 | None:intergenic |
| CTTGCTTAAAGAAGTAATGT+CGG | 0.569630 | 3.1:-91325346 | None:intergenic |
| ATCTTGTGCAGGAAATTGCT+AGG | 0.569881 | 3.1:+91327468 | MS.gene070016:CDS |
| ATTCCACCGACGCCTAATCC+AGG | 0.570972 | 3.1:+91324050 | MS.gene070016:CDS |
| GATGCTGCAAAGAATATTGG+CGG | 0.571710 | 3.1:+91325936 | MS.gene070016:CDS |
| TTTCCTGTTCAGTACAAGGA+GGG | 0.573869 | 3.1:-91323938 | None:intergenic |
| GACTGTTTGCAAAGCGCTAG+AGG | 0.574356 | 3.1:+91324541 | MS.gene070016:CDS |
| CTTTCCTGTTCAGTACAAGG+AGG | 0.575536 | 3.1:-91323939 | None:intergenic |
| TTGTGGTGGAGCTTCCATCA+TGG | 0.576729 | 3.1:-91323715 | None:intergenic |
| AGACAGCCATCCTCTTGTGT+TGG | 0.577568 | 3.1:-91325671 | None:intergenic |
| ATCTGCAACCAATACCATGA+TGG | 0.578563 | 3.1:+91323701 | MS.gene070016:CDS |
| CTTGTACTGAACAGGAAAGC+CGG | 0.578699 | 3.1:+91323943 | MS.gene070016:CDS |
| GGCAACACGGTATTAAGCGT+TGG | 0.579088 | 3.1:+91326829 | MS.gene070016:CDS |
| GTGTTATGAAGATCTTGTGC+AGG | 0.580834 | 3.1:+91327457 | MS.gene070016:CDS |
| AGCATACCCATCATGGGAGA+TGG | 0.583903 | 3.1:+91323663 | None:intergenic |
| ATAGAACAGGAGAGAAAAGA+CGG | 0.585692 | 3.1:+91325850 | MS.gene070016:CDS |
| CATCACTTGTTAATAGGTCA+AGG | 0.586973 | 3.1:+91325279 | MS.gene070016:CDS |
| TGTCGGTTGAGAAGCACGGT+TGG | 0.589014 | 3.1:-91325329 | None:intergenic |
| CGGTTCCGGTGTTTGAACAA+GGG | 0.589544 | 3.1:+91324447 | MS.gene070016:CDS |
| AGCTGATTAGGGCCCTCAAG+TGG | 0.589968 | 3.1:+91324099 | MS.gene070016:CDS |
| CCGACGCCTAATCCAGGACC+TGG | 0.590475 | 3.1:+91324056 | MS.gene070016:CDS |
| TATGGGTGCCGGTTAATAGA+GGG | 0.590546 | 3.1:+91324162 | MS.gene070016:CDS |
| TCACAAAGCCAGGAAACACT+TGG | 0.593082 | 3.1:+91327302 | MS.gene070016:CDS |
| AGGATGGCTGTCTCATTGGA+TGG | 0.593239 | 3.1:+91325681 | MS.gene070016:CDS |
| ACTCCTGATAAAATTACTGG+AGG | 0.593662 | 3.1:-91327642 | None:intergenic |
| AGGCAGGCCAAGAGAATGAA+GGG | 0.595697 | 3.1:-91323863 | None:intergenic |
| TTGTTATAACTCGCAAGCTG+CGG | 0.597685 | 3.1:-91325557 | None:intergenic |
| AGCTCGCAATCCAAACAACC+TGG | 0.599497 | 3.1:-91325394 | None:intergenic |
| TTCCTGTTCAGTACAAGGAG+GGG | 0.600829 | 3.1:-91323937 | None:intergenic |
| GGAAGTCTGACTACATGAAG+AGG | 0.601423 | 3.1:-91327099 | None:intergenic |
| ACTTCAACTCGTCATTGACT+CGG | 0.601900 | 3.1:+91326893 | MS.gene070016:CDS |
| AATAGGTCAAGGTGTTGCCG+GGG | 0.604344 | 3.1:+91325290 | MS.gene070016:CDS |
| CTCCTGATAAAATTACTGGA+GGG | 0.605907 | 3.1:-91327641 | None:intergenic |
| CAGACGCAACATTGTTTGTG+TGG | 0.607061 | 3.1:-91327163 | None:intergenic |
| AAGAAATTACCCTCAACAGA+AGG | 0.608133 | 3.1:-91325810 | None:intergenic |
| GGTCCTGGATTAGGCGTCGG+TGG | 0.609175 | 3.1:-91324053 | None:intergenic |
| CTAACATCAGGTGTCCACTC+AGG | 0.609459 | 3.1:-91324356 | None:intergenic |
| TTATCCCTATAAACTCGACC+AGG | 0.609566 | 3.1:-91324329 | None:intergenic |
| AGCAAATCCAATATCAGCAA+CGG | 0.612275 | 3.1:-91325625 | None:intergenic |
| CTGCTCCCTTGTTCAAACAC+CGG | 0.615580 | 3.1:-91324452 | None:intergenic |
| TGATGTACACGGAACATTAG+CGG | 0.615722 | 3.1:+91324427 | MS.gene070016:CDS |
| TCTGTTATGGAAGATCCACC+AGG | 0.616650 | 3.1:-91324074 | None:intergenic |
| AATTGCCTTTAGCTCAGACG+TGG | 0.620316 | 3.1:+91325121 | MS.gene070016:CDS |
| TCGCAAAGCGTCTCAAAAGG+AGG | 0.621421 | 3.1:+91327370 | MS.gene070016:CDS |
| TTGGAGAACAACGAGCAACC+CGG | 0.622537 | 3.1:+91323885 | MS.gene070016:CDS |
| ATAGATGCTTCGGAGTCGAA+TGG | 0.625235 | 3.1:-91325424 | None:intergenic |
| AGTCGGAACTCCAACACAAG+AGG | 0.629939 | 3.1:+91325661 | MS.gene070016:CDS |
| GACGAGTTGAAGTTTCTGCA+AGG | 0.629978 | 3.1:-91326883 | None:intergenic |
| ATTCAGAGTTGAGATTAGGG+TGG | 0.634639 | 3.1:-91326997 | None:intergenic |
| ACATAGCAAGCATACTCCAC+CGG | 0.635320 | 3.1:-91325213 | None:intergenic |
| GTACATCACACTCTTGAGCA+TGG | 0.639396 | 3.1:-91324412 | None:intergenic |
| GCTCAAGAGTGTGATGTACA+CGG | 0.639508 | 3.1:+91324416 | MS.gene070016:CDS |
| TCTTGAGCATGGTCAACTCG+TGG | 0.640513 | 3.1:-91324401 | None:intergenic |
| CGCACTACCCGAGATTCAAG+AGG | 0.642440 | 3.1:+91325071 | MS.gene070016:CDS |
| GTCTGACTACATGAAGAGGA+AGG | 0.643172 | 3.1:-91327095 | None:intergenic |
| TAGAACAGGAGAGAAAAGAC+GGG | 0.649215 | 3.1:+91325851 | MS.gene070016:CDS |
| GGAACTCCAACACAAGAGGA+TGG | 0.651641 | 3.1:+91325665 | MS.gene070016:CDS |
| AAAAGGATCTGCAGGCAACA+CGG | 0.653871 | 3.1:+91326816 | MS.gene070016:CDS |
| CACACACTGTATATCTCCGG+TGG | 0.659877 | 3.1:+91325197 | MS.gene070016:CDS |
| ATTGCCTTTAGCTCAGACGT+GGG | 0.661550 | 3.1:+91325122 | MS.gene070016:CDS |
| ATAGGTCAAGGTGTTGCCGG+GGG | 0.662191 | 3.1:+91325291 | MS.gene070016:CDS |
| TTCAAGTCTTCAGAATGTGA+AGG | 0.663202 | 3.1:+91324942 | MS.gene070016:CDS |
| ATGTTTGGGAGTTATTGAAG+TGG | 0.676259 | 3.1:+91324478 | MS.gene070016:CDS |
| TTAAGAGGAGATGTTGACTG+TGG | 0.679381 | 3.1:+91325774 | MS.gene070016:CDS |
| ATGGGTGCCGGTTAATAGAG+GGG | 0.680121 | 3.1:+91324163 | MS.gene070016:CDS |
| TGGGTCTCTTGCATCCAACA+GGG | 0.683646 | 3.1:+91325141 | MS.gene070016:CDS |
| ACGCCTAATCCAGGACCTGG+TGG | 0.693296 | 3.1:+91324059 | MS.gene070016:CDS |
| GTAATGTCGGTTGAGAAGCA+CGG | 0.695561 | 3.1:-91325333 | None:intergenic |
| ATCAATTTGAAATGACCCAG+AGG | 0.697023 | 3.1:-91326925 | None:intergenic |
| AACCTGGCATGATGAGACAG+TGG | 0.699432 | 3.1:-91325378 | None:intergenic |
| ATAGGGATAAGATTCCTGAG+TGG | 0.764696 | 3.1:+91324342 | MS.gene070016:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACATTATGTAAAACTTAATT+TGG | - | chr3.1:91326191-91326210 | None:intergenic | 15.0% |
| !! | AGTACAAAAAAATAATATAG+GGG | - | chr3.1:91326118-91326137 | None:intergenic | 15.0% |
| !! | CAGTACAAAAAAATAATATA+GGG | - | chr3.1:91326119-91326138 | None:intergenic | 15.0% |
| !! | TCAGTACAAAAAAATAATAT+AGG | - | chr3.1:91326120-91326139 | None:intergenic | 15.0% |
| !!! | TTTACATTTAATTCACTTTT+AGG | + | chr3.1:91326643-91326662 | MS.gene070016:intron | 15.0% |
| !!! | TTTCATTTTGTTTTTTCTAT+TGG | - | chr3.1:91326029-91326048 | None:intergenic | 15.0% |
| !! | AAGATATGCTTATACAAATA+TGG | + | chr3.1:91324144-91324163 | MS.gene070016:CDS | 20.0% |
| !! | AGATATGCTTATACAAATAT+GGG | + | chr3.1:91324145-91324164 | MS.gene070016:CDS | 20.0% |
| !! | AGTTATAACAAATAAGGAAT+TGG | + | chr3.1:91325569-91325588 | MS.gene070016:CDS | 20.0% |
| !! | CAAATTCGATATCAAATATT+TGG | + | chr3.1:91327514-91327533 | MS.gene070016:CDS | 20.0% |
| !! | CATTTCAATATAAATGCTTA+TGG | + | chr3.1:91324796-91324815 | MS.gene070016:intron | 20.0% |
| !! | TCTAACTTGAAATTAGAATT+TGG | + | chr3.1:91326577-91326596 | MS.gene070016:intron | 20.0% |
| !! | TTATATTGAAATGTGTAACA+AGG | - | chr3.1:91324789-91324808 | None:intergenic | 20.0% |
| !! | TTGATTTATTATCTTGAATC+AGG | - | chr3.1:91327268-91327287 | None:intergenic | 20.0% |
| !!! | TTTTACATAATGTGACTTAA+AGG | + | chr3.1:91326198-91326217 | MS.gene070016:intron | 20.0% |
| !!! | TTTTAGAACAGTGAATTTAA+GGG | + | chr3.1:91324670-91324689 | MS.gene070016:intron | 20.0% |
| !!! | TTTTTTTGTACTGAACATAT+AGG | + | chr3.1:91326126-91326145 | MS.gene070016:intron | 20.0% |
| ! | AAAATTGATGAGTAGAACAT+AGG | - | chr3.1:91326068-91326087 | None:intergenic | 25.0% |
| ! | AACAAAATCTTAAAGGACTA+CGG | + | chr3.1:91326235-91326254 | MS.gene070016:intron | 25.0% |
| ! | AACTTGAAACAAAGAACTTA+TGG | + | chr3.1:91324647-91324666 | MS.gene070016:intron | 25.0% |
| ! | AATGTAAAACAATAAACCCA+TGG | - | chr3.1:91326631-91326650 | None:intergenic | 25.0% |
| ! | ATTGTCCATGATTATTCAAA+GGG | + | chr3.1:91325530-91325549 | MS.gene070016:CDS | 25.0% |
| ! | CAAGAAAATCTTACTTTAAG+AGG | + | chr3.1:91325759-91325778 | MS.gene070016:CDS | 25.0% |
| ! | CAGCATTATTAACTATAATC+CGG | - | chr3.1:91323965-91323984 | None:intergenic | 25.0% |
| ! | CATAGAGTAAAAGTTACATT+TGG | + | chr3.1:91327398-91327417 | MS.gene070016:CDS | 25.0% |
| ! | GAAAAATTCAATTCAACAGA+TGG | - | chr3.1:91326777-91326796 | None:intergenic | 25.0% |
| ! | TTCCTTCTATTCAAAATTCT+CGG | + | chr3.1:91326947-91326966 | MS.gene070016:CDS | 25.0% |
| ! | TTTGATGAGCTTTACATATA+TGG | - | chr3.1:91324841-91324860 | None:intergenic | 25.0% |
| !! | AACAATGTCTAGAAAGTTTT+CGG | + | chr3.1:91325722-91325741 | MS.gene070016:CDS | 25.0% |
| !! | AATACTAGTTTAATGATCTG+GGG | + | chr3.1:91324875-91324894 | MS.gene070016:intron | 25.0% |
| !! | ACTTTTACATATTGAATTGC+TGG | + | chr3.1:91324736-91324755 | MS.gene070016:intron | 25.0% |
| !! | CAATACTAGTTTAATGATCT+GGG | + | chr3.1:91324874-91324893 | MS.gene070016:intron | 25.0% |
| !! | TCAACAAACTGGTTATATTT+TGG | + | chr3.1:91325022-91325041 | MS.gene070016:intron | 25.0% |
| !! | TCAATACTAGTTTAATGATC+TGG | + | chr3.1:91324873-91324892 | MS.gene070016:intron | 25.0% |
| !! | TGTAAGTTTAAGACTCATTT+GGG | + | chr3.1:91324005-91324024 | MS.gene070016:CDS | 25.0% |
| !!! | AAAATATAACCAGTTTGTTG+AGG | - | chr3.1:91325023-91325042 | None:intergenic | 25.0% |
| !!! | AGAATTGATTTTGACATGTT+TGG | + | chr3.1:91326533-91326552 | MS.gene070016:intron | 25.0% |
| !!! | GTTTTAGAACAGTGAATTTA+AGG | + | chr3.1:91324669-91324688 | MS.gene070016:intron | 25.0% |
| !!! | TAAATTAGCTCTAACGTTTA+AGG | + | chr3.1:91326451-91326470 | MS.gene070016:intron | 25.0% |
| !!! | TCTTTGTTTCAAGTTCTTTT+GGG | - | chr3.1:91324642-91324661 | None:intergenic | 25.0% |
| !!! | TTCTTTGTTTCAAGTTCTTT+TGG | - | chr3.1:91324643-91324662 | None:intergenic | 25.0% |
| !!! | TTTGCGAGTGTTTTTTAATA+AGG | - | chr3.1:91327357-91327376 | None:intergenic | 25.0% |
| AAACATATAGCAAAACCTCA+TGG | + | chr3.1:91326305-91326324 | MS.gene070016:intron | 30.0% | |
| AAAGATGCTGCAAAGAATAT+TGG | + | chr3.1:91325933-91325952 | MS.gene070016:CDS | 30.0% | |
| ACCACAAGATGAAAATTCAA+TGG | + | chr3.1:91323731-91323750 | MS.gene070016:CDS | 30.0% | |
| AGAACTCCTGATAAAATTAC+TGG | - | chr3.1:91327648-91327667 | None:intergenic | 30.0% | |
| AGGAGCAATTTAATCATAAG+AGG | - | chr3.1:91324769-91324788 | None:intergenic | 30.0% | |
| ATGAGCATATTTGCCTATTT+GGG | - | chr3.1:91326353-91326372 | None:intergenic | 30.0% | |
| ATGTAAAGCTCATCAAAAGT+CGG | + | chr3.1:91324844-91324863 | MS.gene070016:intron | 30.0% | |
| ATTTGGACGATGATTATGAA+TGG | + | chr3.1:91327531-91327550 | MS.gene070016:CDS | 30.0% | |
| CATTGTCCATGATTATTCAA+AGG | + | chr3.1:91325529-91325548 | MS.gene070016:CDS | 30.0% | |
| CGGATTATAGTTAATAATGC+TGG | + | chr3.1:91323963-91323982 | MS.gene070016:CDS | 30.0% | |
| CTTATCATCTAATGAAGTGA+TGG | + | chr3.1:91325602-91325621 | MS.gene070016:CDS | 30.0% | |
| CTTGCGAGTTATAACAAATA+AGG | + | chr3.1:91325563-91325582 | MS.gene070016:CDS | 30.0% | |
| CTTGCTTAAAGAAGTAATGT+CGG | - | chr3.1:91325349-91325368 | None:intergenic | 30.0% | |
| GAGACAGAACAAAATCTTAA+AGG | + | chr3.1:91326228-91326247 | MS.gene070016:intron | 30.0% | |
| GGAGCAATTTAATCATAAGA+GGG | - | chr3.1:91324768-91324787 | None:intergenic | 30.0% | |
| GGTAATTTCTTGTCAAGTTT+GGG | + | chr3.1:91325822-91325841 | MS.gene070016:CDS | 30.0% | |
| TACATAGAAAATCATCTCTG+TGG | + | chr3.1:91324965-91324984 | MS.gene070016:intron | 30.0% | |
| TCTTCATAACACCAATTCTT+TGG | - | chr3.1:91327449-91327468 | None:intergenic | 30.0% | |
| TTGATTCAGAGTTGAGATTA+GGG | - | chr3.1:91327003-91327022 | None:intergenic | 30.0% | |
| TTTGGACGATGATTATGAAT+GGG | + | chr3.1:91327532-91327551 | MS.gene070016:CDS | 30.0% | |
| ! | AACTTTTGTTAGATGGTTGT+TGG | + | chr3.1:91323772-91323791 | MS.gene070016:CDS | 30.0% |
| ! | ATCCGAGAATTTTGAATAGA+AGG | - | chr3.1:91326952-91326971 | None:intergenic | 30.0% |
| ! | ATGAGTGAACTTTTGTTAGA+TGG | + | chr3.1:91323765-91323784 | MS.gene070016:CDS | 30.0% |
| ! | ATTGAATTTTCATCTTGTGG+TGG | - | chr3.1:91323732-91323751 | None:intergenic | 30.0% |
| ! | GTGTAAGTTTAAGACTCATT+TGG | + | chr3.1:91324004-91324023 | MS.gene070016:CDS | 30.0% |
| ! | TCAAAGATTGGATTGGAAAA+AGG | - | chr3.1:91323843-91323862 | None:intergenic | 30.0% |
| ! | TCCATTGAATTTTCATCTTG+TGG | - | chr3.1:91323735-91323754 | None:intergenic | 30.0% |
| ! | TTTTCTATTGGCATGCTAAA+TGG | - | chr3.1:91326017-91326036 | None:intergenic | 30.0% |
| !! | ATGAGGTTTTGCTATATGTT+TGG | - | chr3.1:91326306-91326325 | None:intergenic | 30.0% |
| !! | TTCCTTTTTCACTTGAATCA+AGG | + | chr3.1:91324216-91324235 | MS.gene070016:CDS | 30.0% |
| !!! | TACAGTTGATTTTTAGCCAT+GGG | + | chr3.1:91326612-91326631 | MS.gene070016:intron | 30.0% |
| AAAATACATCCTGCAGACTA+CGG | - | chr3.1:91326282-91326301 | None:intergenic | 35.0% | |
| AACTTGTGATGCAGATTTAG+AGG | + | chr3.1:91327562-91327581 | MS.gene070016:CDS | 35.0% | |
| AAGAAATTACCCTCAACAGA+AGG | - | chr3.1:91325813-91325832 | None:intergenic | 35.0% | |
| AATTCTTTGGCAACCTAAAC+CGG | - | chr3.1:91327436-91327455 | None:intergenic | 35.0% | |
| ACTCCTGATAAAATTACTGG+AGG | - | chr3.1:91327645-91327664 | None:intergenic | 35.0% | |
| AGAGAACAGAACTACATGAA+GGG | - | chr3.1:91326403-91326422 | None:intergenic | 35.0% | |
| AGATAGAATGCTTGTGTGTA+AGG | - | chr3.1:91325966-91325985 | None:intergenic | 35.0% | |
| AGCAAATCCAATATCAGCAA+CGG | - | chr3.1:91325628-91325647 | None:intergenic | 35.0% | |
| AGTGGATCAAGGATTTCAAT+AGG | + | chr3.1:91324117-91324136 | MS.gene070016:CDS | 35.0% | |
| AGTTTGGGAGTAAATAGAAC+AGG | + | chr3.1:91325837-91325856 | MS.gene070016:CDS | 35.0% | |
| ATAGAACAGGAGAGAAAAGA+CGG | + | chr3.1:91325850-91325869 | MS.gene070016:CDS | 35.0% | |
| ATGAGACACTTGCATTTGTT+TGG | - | chr3.1:91326710-91326729 | None:intergenic | 35.0% | |
| ATGTTTGGGAGTTATTGAAG+TGG | + | chr3.1:91324478-91324497 | MS.gene070016:CDS | 35.0% | |
| CATAACAGAGAAGCTGATTA+GGG | + | chr3.1:91324088-91324107 | MS.gene070016:CDS | 35.0% | |
| CATGAGCATATTTGCCTATT+TGG | - | chr3.1:91326354-91326373 | None:intergenic | 35.0% | |
| CTATCGTCTCCAAATTTATC+AGG | + | chr3.1:91326972-91326991 | MS.gene070016:CDS | 35.0% | |
| CTCCTGATAAAATTACTGGA+GGG | - | chr3.1:91327644-91327663 | None:intergenic | 35.0% | |
| CTGAGATACTATAGATGCTT+CGG | - | chr3.1:91325437-91325456 | None:intergenic | 35.0% | |
| CTTGATTCAGAGTTGAGATT+AGG | - | chr3.1:91327004-91327023 | None:intergenic | 35.0% | |
| GACCTTGATTCAAGTGAAAA+AGG | - | chr3.1:91324221-91324240 | None:intergenic | 35.0% | |
| GATATCTCACAGAGATTTCT+CGG | - | chr3.1:91324262-91324281 | None:intergenic | 35.0% | |
| GCCTATTTGGGAAACATTAA+GGG | - | chr3.1:91326341-91326360 | None:intergenic | 35.0% | |
| GCTCATGTAATAAAACCTCA+TGG | + | chr3.1:91326367-91326386 | MS.gene070016:intron | 35.0% | |
| GGGTAATTTCTTGTCAAGTT+TGG | + | chr3.1:91325821-91325840 | MS.gene070016:CDS | 35.0% | |
| GGTAACAAAGATTCATTGGT+TGG | + | chr3.1:91327185-91327204 | MS.gene070016:CDS | 35.0% | |
| GTCTGGTAACAAAGATTCAT+TGG | + | chr3.1:91327181-91327200 | MS.gene070016:CDS | 35.0% | |
| TAATAAGGACTTGCGATACT+CGG | - | chr3.1:91327342-91327361 | None:intergenic | 35.0% | |
| TATAGGGGAACGAAACATTA+AGG | - | chr3.1:91326103-91326122 | None:intergenic | 35.0% | |
| TCCCTTAATGTTTCCCAAAT+AGG | + | chr3.1:91326337-91326356 | MS.gene070016:intron | 35.0% | |
| TCTCAATTTCCTCAACAAAC+TGG | + | chr3.1:91325011-91325030 | MS.gene070016:intron | 35.0% | |
| TCTCGGAAGATAAAAAAGGT+TGG | + | chr3.1:91326855-91326874 | MS.gene070016:CDS | 35.0% | |
| TGCCTATTTGGGAAACATTA+AGG | - | chr3.1:91326342-91326361 | None:intergenic | 35.0% | |
| TGCTACAGATGTAATTCAGT+CGG | + | chr3.1:91325644-91325663 | MS.gene070016:CDS | 35.0% | |
| TGGCTAAAAATCAACTGTAG+AGG | - | chr3.1:91326611-91326630 | None:intergenic | 35.0% | |
| TGTAATAAAACCTCATGGTC+TGG | + | chr3.1:91326372-91326391 | MS.gene070016:intron | 35.0% | |
| TGTAATTATCATCAGAGTGC+CGG | - | chr3.1:91325179-91325198 | None:intergenic | 35.0% | |
| TTAAGACTCATTTGGGTGAA+GGG | + | chr3.1:91324012-91324031 | MS.gene070016:CDS | 35.0% | |
| TTACACACACTGTATATCTC+CGG | + | chr3.1:91325194-91325213 | MS.gene070016:CDS | 35.0% | |
| TTCAAGTCTTCAGAATGTGA+AGG | + | chr3.1:91324942-91324961 | MS.gene070016:CDS | 35.0% | |
| TTCCAGCGAAATATTGTCTA+AGG | - | chr3.1:91325908-91325927 | None:intergenic | 35.0% | |
| TTTGTTAGATGGTTGTTGGT+TGG | + | chr3.1:91323776-91323795 | MS.gene070016:CDS | 35.0% | |
| ! | AACCCTCCAGTAATTTTATC+AGG | + | chr3.1:91327639-91327658 | MS.gene070016:CDS | 35.0% |
| ! | AGATCATTAGCTCTCAGAAT+TGG | - | chr3.1:91324197-91324216 | None:intergenic | 35.0% |
| ! | ATCAATTTGAAATGACCCAG+AGG | - | chr3.1:91326928-91326947 | None:intergenic | 35.0% |
| ! | ATGGAGCATCACTTGTTAAT+AGG | + | chr3.1:91325273-91325292 | MS.gene070016:CDS | 35.0% |
| ! | CATCACTTGTTAATAGGTCA+AGG | + | chr3.1:91325279-91325298 | MS.gene070016:CDS | 35.0% |
| ! | CTAGAAAGTTTTCGGAACAA+AGG | + | chr3.1:91325730-91325749 | MS.gene070016:CDS | 35.0% |
| ! | GCATAGAGTTCTTGTTTGTT+TGG | + | chr3.1:91324583-91324602 | MS.gene070016:intron | 35.0% |
| ! | GTCATCTTTTACAACACACA+AGG | + | chr3.1:91324607-91324626 | MS.gene070016:intron | 35.0% |
| ! | TCTGTACTACAACTCTGAAA+AGG | + | chr3.1:91326799-91326818 | MS.gene070016:CDS | 35.0% |
| ! | TTTAAGACTCATTTGGGTGA+AGG | + | chr3.1:91324011-91324030 | MS.gene070016:CDS | 35.0% |
| !! | TTGCTATGTTGGTGATTCTT+CGG | + | chr3.1:91325227-91325246 | MS.gene070016:CDS | 35.0% |
| !!! | ACCTTTTTTATCTTCCGAGA+AGG | - | chr3.1:91326855-91326874 | None:intergenic | 35.0% |
| !!! | CAAACTGGTTATATTTTGGC+AGG | + | chr3.1:91325026-91325045 | MS.gene070016:intron | 35.0% |
| !!! | CTACAGTTGATTTTTAGCCA+TGG | + | chr3.1:91326611-91326630 | MS.gene070016:intron | 35.0% |
| AGATTTCTCGGTACTTTGCA+AGG | - | chr3.1:91324250-91324269 | None:intergenic | 40.0% | |
| AGGGTGGTTCCTGATAAATT+TGG | - | chr3.1:91326984-91327003 | None:intergenic | 40.0% | |
| ATAGGGATAAGATTCCTGAG+TGG | + | chr3.1:91324342-91324361 | MS.gene070016:CDS | 40.0% | |
| ATCTGCAACCAATACCATGA+TGG | + | chr3.1:91323701-91323720 | MS.gene070016:CDS | 40.0% | |
| ATCTTGTGCAGGAAATTGCT+AGG | + | chr3.1:91327468-91327487 | MS.gene070016:CDS | 40.0% | |
| ATTCAGAGTTGAGATTAGGG+TGG | - | chr3.1:91327000-91327019 | None:intergenic | 40.0% | |
| ATTCTTTGGCAACCTAAACC+GGG | - | chr3.1:91327435-91327454 | None:intergenic | 40.0% | |
| CACCTGATGTTAGATTCTTC+AGG | + | chr3.1:91324366-91324385 | MS.gene070016:CDS | 40.0% | |
| CAGAGAACAGAACTACATGA+AGG | - | chr3.1:91326404-91326423 | None:intergenic | 40.0% | |
| CCATAACAGAGAAGCTGATT+AGG | + | chr3.1:91324087-91324106 | MS.gene070016:CDS | 40.0% | |
| CCTAATCAGCTTCTCTGTTA+TGG | - | chr3.1:91324090-91324109 | None:intergenic | 40.0% | |
| CGGACAGTTAAGCAACTTAA+AGG | + | chr3.1:91326255-91326274 | MS.gene070016:intron | 40.0% | |
| CTATCATCCCCTCTATTAAC+CGG | - | chr3.1:91324173-91324192 | None:intergenic | 40.0% | |
| CTCCTGAAGAATCTAACATC+AGG | - | chr3.1:91324371-91324390 | None:intergenic | 40.0% | |
| GAAATCCTTGATCCACTTGA+GGG | - | chr3.1:91324114-91324133 | None:intergenic | 40.0% | |
| GAACTCTATGCAAACAAGCA+AGG | - | chr3.1:91324574-91324593 | None:intergenic | 40.0% | |
| GAGAATGAAGGGTCAAAGAT+TGG | - | chr3.1:91323855-91323874 | None:intergenic | 40.0% | |
| GATGCTGCAAAGAATATTGG+CGG | + | chr3.1:91325936-91325955 | MS.gene070016:CDS | 40.0% | |
| GCACACCCTTTGAATAATCA+TGG | - | chr3.1:91325538-91325557 | None:intergenic | 40.0% | |
| GCCTTCTCGGAAGATAAAAA+AGG | + | chr3.1:91326851-91326870 | MS.gene070016:CDS | 40.0% | |
| GCTTATACAAATATGGGTGC+CGG | + | chr3.1:91324151-91324170 | MS.gene070016:CDS | 40.0% | |
| GGAACATGAATGGCTTGAAT+AGG | - | chr3.1:91327123-91327142 | None:intergenic | 40.0% | |
| GTCCTTAGACAATATTTCGC+TGG | + | chr3.1:91325903-91325922 | MS.gene070016:CDS | 40.0% | |
| GTGTTATGAAGATCTTGTGC+AGG | + | chr3.1:91327457-91327476 | MS.gene070016:CDS | 40.0% | |
| TAAGACTCATTTGGGTGAAG+GGG | + | chr3.1:91324013-91324032 | MS.gene070016:CDS | 40.0% | |
| TAGAACAGGAGAGAAAAGAC+GGG | + | chr3.1:91325851-91325870 | MS.gene070016:CDS | 40.0% | |
| TATAGCAAAACCTCATGGTC+TGG | + | chr3.1:91326310-91326329 | MS.gene070016:intron | 40.0% | |
| TCACTGTCATTGCAATCTAC+AGG | - | chr3.1:91325486-91325505 | None:intergenic | 40.0% | |
| TCTCAGAACCTCTTGAATCT+CGG | - | chr3.1:91325082-91325101 | None:intergenic | 40.0% | |
| TCTTAAACTTACACTGCTGC+AGG | - | chr3.1:91323998-91324017 | None:intergenic | 40.0% | |
| TCTTTGACCCTTCATTCTCT+TGG | + | chr3.1:91323856-91323875 | MS.gene070016:CDS | 40.0% | |
| TGAAATCCTTGATCCACTTG+AGG | - | chr3.1:91324115-91324134 | None:intergenic | 40.0% | |
| TGAAGGGTCAAAGATTGGAT+TGG | - | chr3.1:91323850-91323869 | None:intergenic | 40.0% | |
| TGATGTACACGGAACATTAG+CGG | + | chr3.1:91324427-91324446 | MS.gene070016:CDS | 40.0% | |
| TGCAAACAGTCTCAAGTTCA+CGG | - | chr3.1:91324532-91324551 | None:intergenic | 40.0% | |
| TGGCATGCTAAATGGTAACT+TGG | - | chr3.1:91326009-91326028 | None:intergenic | 40.0% | |
| TTATCCCTATAAACTCGACC+AGG | - | chr3.1:91324332-91324351 | None:intergenic | 40.0% | |
| TTGTTATAACTCGCAAGCTG+CGG | - | chr3.1:91325560-91325579 | None:intergenic | 40.0% | |
| TTTCCTGTTCAGTACAAGGA+GGG | - | chr3.1:91323941-91323960 | None:intergenic | 40.0% | |
| TTTGCCTGGTCGAGTTTATA+GGG | + | chr3.1:91324325-91324344 | MS.gene070016:CDS | 40.0% | |
| ! | ACTTCAACTCGTCATTGACT+CGG | + | chr3.1:91326893-91326912 | MS.gene070016:CDS | 40.0% |
| ! | AGTGATAGTTTTCTCTGCCT+TGG | - | chr3.1:91325877-91325896 | None:intergenic | 40.0% |
| ! | ATATCAGTTTTCTGCAGAGG+TGG | + | chr3.1:91324277-91324296 | MS.gene070016:CDS | 40.0% |
| ! | GAAAGTTTTCGGAACAAAGG+CGG | + | chr3.1:91325733-91325752 | MS.gene070016:CDS | 40.0% |
| ! | GAGATATCAGTTTTCTGCAG+AGG | + | chr3.1:91324274-91324293 | MS.gene070016:CDS | 40.0% |
| ! | TGGTTCTGCAGTGACAAAAA+TGG | - | chr3.1:91326690-91326709 | None:intergenic | 40.0% |
| ! | TTAAGAGGAGATGTTGACTG+TGG | + | chr3.1:91325774-91325793 | MS.gene070016:CDS | 40.0% |
| !! | GGTTTAGGTTGCCAAAGAAT+TGG | + | chr3.1:91327435-91327454 | MS.gene070016:CDS | 40.0% |
| !! | TTAATAGGTCAAGGTGTTGC+CGG | + | chr3.1:91325288-91325307 | MS.gene070016:CDS | 40.0% |
| !!! | GTTTTTTCATGAGGCTTGCA+TGG | + | chr3.1:91325254-91325273 | MS.gene070016:CDS | 40.0% |
| !!! | TTCGGTCAGGTTTTTTCATG+AGG | + | chr3.1:91325245-91325264 | MS.gene070016:CDS | 40.0% |
| AAAAGGATCTGCAGGCAACA+CGG | + | chr3.1:91326816-91326835 | MS.gene070016:CDS | 45.0% | |
| ACAACACAGCAGAGCAACTA+TGG | + | chr3.1:91324506-91324525 | MS.gene070016:CDS | 45.0% | |
| ACATAGCAAGCATACTCCAC+CGG | - | chr3.1:91325216-91325235 | None:intergenic | 45.0% | |
| ATAGATGCTTCGGAGTCGAA+TGG | - | chr3.1:91325427-91325446 | None:intergenic | 45.0% | |
| CACACAAACAATGTTGCGTC+TGG | + | chr3.1:91327164-91327183 | MS.gene070016:CDS | 45.0% | |
| CAGACGCAACATTGTTTGTG+TGG | - | chr3.1:91327166-91327185 | None:intergenic | 45.0% | |
| CATTTGGAGACGAGAAAACC+CGG | + | chr3.1:91327414-91327433 | MS.gene070016:CDS | 45.0% | |
| CGGTTAATAGAGGGGATGAT+AGG | + | chr3.1:91324171-91324190 | MS.gene070016:CDS | 45.0% | |
| CTCAGAACCTCTTGAATCTC+GGG | - | chr3.1:91325081-91325100 | None:intergenic | 45.0% | |
| CTGACAAGCTGGAACATGAA+TGG | - | chr3.1:91327133-91327152 | None:intergenic | 45.0% | |
| CTTGTACTGAACAGGAAAGC+CGG | + | chr3.1:91323943-91323962 | MS.gene070016:CDS | 45.0% | |
| CTTTCCTGTTCAGTACAAGG+AGG | - | chr3.1:91323942-91323961 | None:intergenic | 45.0% | |
| GAGTGTTCTCCTTCTGTTGA+GGG | + | chr3.1:91325801-91325820 | MS.gene070016:CDS | 45.0% | |
| GGAAGTCTGACTACATGAAG+AGG | - | chr3.1:91327102-91327121 | None:intergenic | 45.0% | |
| GGCTGTATGCTTAATGAGAC+TGG | - | chr3.1:91327035-91327054 | None:intergenic | 45.0% | |
| GGGTTGCAGACAAAGTTTGA+TGG | - | chr3.1:91327624-91327643 | None:intergenic | 45.0% | |
| GTACATCACACTCTTGAGCA+TGG | - | chr3.1:91324415-91324434 | None:intergenic | 45.0% | |
| GTCTGACTACATGAAGAGGA+AGG | - | chr3.1:91327098-91327117 | None:intergenic | 45.0% | |
| GTGATTTCGATGCACCTTCA+GGG | - | chr3.1:91327076-91327095 | None:intergenic | 45.0% | |
| GTTTGCCTGGTCGAGTTTAT+AGG | + | chr3.1:91324324-91324343 | MS.gene070016:CDS | 45.0% | |
| TCACAAAGCCAGGAAACACT+TGG | + | chr3.1:91327302-91327321 | MS.gene070016:CDS | 45.0% | |
| TCTCATCATGCCAGGTTGTT+TGG | + | chr3.1:91325384-91325403 | MS.gene070016:CDS | 45.0% | |
| TCTGTTATGGAAGATCCACC+AGG | - | chr3.1:91324077-91324096 | None:intergenic | 45.0% | |
| TGCATCCAACAGGGAAAAGA+TGG | + | chr3.1:91325150-91325169 | MS.gene070016:CDS | 45.0% | |
| TGGAGCTTCCATCATGGTAT+TGG | - | chr3.1:91323712-91323731 | None:intergenic | 45.0% | |
| TTCCTGTTCAGTACAAGGAG+GGG | - | chr3.1:91323940-91323959 | None:intergenic | 45.0% | |
| ! | AATTGCCTTTAGCTCAGACG+TGG | + | chr3.1:91325121-91325140 | MS.gene070016:CDS | 45.0% |
| ! | ACTTGCGATACTCGGTTTTC+GGG | - | chr3.1:91327334-91327353 | None:intergenic | 45.0% |
| ! | AGGAGATGTTGACTGTGGTA+GGG | + | chr3.1:91325779-91325798 | MS.gene070016:CDS | 45.0% |
| ! | ATTGCCTTTAGCTCAGACGT+GGG | + | chr3.1:91325122-91325141 | MS.gene070016:CDS | 45.0% |
| ! | ATTTGGGTGAAGGGGTTAGT+AGG | + | chr3.1:91324021-91324040 | MS.gene070016:CDS | 45.0% |
| ! | CAACTCTGAAAAGGATCTGC+AGG | + | chr3.1:91326808-91326827 | MS.gene070016:CDS | 45.0% |
| ! | GACGAGTTGAAGTTTCTGCA+AGG | - | chr3.1:91326886-91326905 | None:intergenic | 45.0% |
| ! | GACTTGCGATACTCGGTTTT+CGG | - | chr3.1:91327335-91327354 | None:intergenic | 45.0% |
| ! | GCTCAAGAGTGTGATGTACA+CGG | + | chr3.1:91324416-91324435 | MS.gene070016:CDS | 45.0% |
| ! | GTAATGTCGGTTGAGAAGCA+CGG | - | chr3.1:91325336-91325355 | None:intergenic | 45.0% |
| !! | ATATGGGTGCCGGTTAATAG+AGG | + | chr3.1:91324161-91324180 | MS.gene070016:CDS | 45.0% |
| !! | ATGTTGGTGATTCTTCGGTC+AGG | + | chr3.1:91325232-91325251 | MS.gene070016:CDS | 45.0% |
| !! | GGGGAAAGTTGTTAACTTGC+AGG | + | chr3.1:91324894-91324913 | MS.gene070016:intron | 45.0% |
| !! | GTATTAAGCGTTGGCCTTCT+CGG | + | chr3.1:91326838-91326857 | MS.gene070016:CDS | 45.0% |
| !! | GTGGAGTATGCTTGCTATGT+TGG | + | chr3.1:91325216-91325235 | MS.gene070016:CDS | 45.0% |
| !! | GTTTCCTGGCTTTGTGATCT+TGG | - | chr3.1:91327299-91327318 | None:intergenic | 45.0% |
| !! | GTTTGTCATAAAAGCACCCC+CGG | - | chr3.1:91325310-91325329 | None:intergenic | 45.0% |
| !! | TAATAGGTCAAGGTGTTGCC+GGG | + | chr3.1:91325289-91325308 | MS.gene070016:CDS | 45.0% |
| !! | TATGGGTGCCGGTTAATAGA+GGG | + | chr3.1:91324162-91324181 | MS.gene070016:CDS | 45.0% |
| !!! | TATAATCAATTATTTTTTTT+TGG | - | chr3.1:91326477-91326496 | None:intergenic | 5.0% |
| AACAGGGAAAAGATGGCTGC+CGG | + | chr3.1:91325157-91325176 | MS.gene070016:CDS | 50.0% | |
| AACCTGGCATGATGAGACAG+TGG | - | chr3.1:91325381-91325400 | None:intergenic | 50.0% | |
| AAGGCAGGCCAAGAGAATGA+AGG | - | chr3.1:91323867-91323886 | None:intergenic | 50.0% | |
| AAGGGATACTCCAGACCATG+AGG | - | chr3.1:91326385-91326404 | None:intergenic | 50.0% | |
| ACAAGGGAGCAGGACATGTT+TGG | + | chr3.1:91324463-91324482 | MS.gene070016:CDS | 50.0% | |
| ACACGGAACATTAGCGGTTC+CGG | + | chr3.1:91324433-91324452 | MS.gene070016:CDS | 50.0% | |
| ACCTTCAGGGCTCAACGAAT+CGG | - | chr3.1:91327063-91327082 | None:intergenic | 50.0% | |
| AGACAGCCATCCTCTTGTGT+TGG | - | chr3.1:91325674-91325693 | None:intergenic | 50.0% | |
| AGCAACCCGGCAATGATGTT+CGG | + | chr3.1:91323898-91323917 | MS.gene070016:CDS | 50.0% | |
| AGCTCGCAATCCAAACAACC+TGG | - | chr3.1:91325397-91325416 | None:intergenic | 50.0% | |
| AGGATGGCTGTCTCATTGGA+TGG | + | chr3.1:91325681-91325700 | MS.gene070016:CDS | 50.0% | |
| AGGCAGGCCAAGAGAATGAA+GGG | - | chr3.1:91323866-91323885 | None:intergenic | 50.0% | |
| AGTCGGAACTCCAACACAAG+AGG | + | chr3.1:91325661-91325680 | MS.gene070016:CDS | 50.0% | |
| ATCCACTGTCTCATCATGCC+AGG | + | chr3.1:91325376-91325395 | MS.gene070016:CDS | 50.0% | |
| CAAGAGGATGGCTGTCTCAT+TGG | + | chr3.1:91325677-91325696 | MS.gene070016:CDS | 50.0% | |
| CAAGGGAGCAGGACATGTTT+GGG | + | chr3.1:91324464-91324483 | MS.gene070016:CDS | 50.0% | |
| CACACACTGTATATCTCCGG+TGG | + | chr3.1:91325197-91325216 | MS.gene070016:CDS | 50.0% | |
| CATGCCAAGATCACAAAGCC+AGG | + | chr3.1:91327292-91327311 | MS.gene070016:CDS | 50.0% | |
| CGGCTTTCCTGTTCAGTACA+AGG | - | chr3.1:91323945-91323964 | None:intergenic | 50.0% | |
| CGGTTCCGGTGTTTGAACAA+GGG | + | chr3.1:91324447-91324466 | MS.gene070016:CDS | 50.0% | |
| CTAACATCAGGTGTCCACTC+AGG | - | chr3.1:91324359-91324378 | None:intergenic | 50.0% | |
| CTCTTGAATCTCGGGTAGTG+CGG | - | chr3.1:91325073-91325092 | None:intergenic | 50.0% | |
| CTGCTCCCTTGTTCAAACAC+CGG | - | chr3.1:91324455-91324474 | None:intergenic | 50.0% | |
| CTTAAAGGACCGTAGTCTGC+AGG | + | chr3.1:91326270-91326289 | MS.gene070016:intron | 50.0% | |
| GAGACGAGAAAACCCGGTTT+AGG | + | chr3.1:91327420-91327439 | MS.gene070016:CDS | 50.0% | |
| GGAACTCCAACACAAGAGGA+TGG | + | chr3.1:91325665-91325684 | MS.gene070016:CDS | 50.0% | |
| GGCAACACGGTATTAAGCGT+TGG | + | chr3.1:91326829-91326848 | MS.gene070016:CDS | 50.0% | |
| GGTGATTTCGATGCACCTTC+AGG | - | chr3.1:91327077-91327096 | None:intergenic | 50.0% | |
| GGTGTTCACCAAGTGTTTCC+TGG | - | chr3.1:91327313-91327332 | None:intergenic | 50.0% | |
| GTGATGGCCGTTGCTGATAT+TGG | + | chr3.1:91325618-91325637 | MS.gene070016:CDS | 50.0% | |
| GTTGTTGATCTCAGCAGCTC+TGG | + | chr3.1:91324916-91324935 | MS.gene070016:CDS | 50.0% | |
| TCTTGAGCATGGTCAACTCG+TGG | - | chr3.1:91324404-91324423 | None:intergenic | 50.0% | |
| TGGGTCTCTTGCATCCAACA+GGG | + | chr3.1:91325141-91325160 | MS.gene070016:CDS | 50.0% | |
| TGGTTGGAAGCTTCTGCTGA+TGG | + | chr3.1:91323792-91323811 | MS.gene070016:CDS | 50.0% | |
| TTCATTCTCTTGGCCTGCCT+TGG | + | chr3.1:91323866-91323885 | MS.gene070016:CDS | 50.0% | |
| TTGGAGAACAACGAGCAACC+CGG | + | chr3.1:91323885-91323904 | MS.gene070016:CDS | 50.0% | |
| ! | CACTCGCAAAGCGTCTCAAA+AGG | + | chr3.1:91327367-91327386 | MS.gene070016:CDS | 50.0% |
| ! | GACTGTTTGCAAAGCGCTAG+AGG | + | chr3.1:91324541-91324560 | MS.gene070016:CDS | 50.0% |
| ! | GAGGAGATGTTGACTGTGGT+AGG | + | chr3.1:91325778-91325797 | MS.gene070016:CDS | 50.0% |
| ! | GGAGTGTTCTCCTTCTGTTG+AGG | + | chr3.1:91325800-91325819 | MS.gene070016:CDS | 50.0% |
| ! | GTGAAGGGGTTAGTAGGTTG+TGG | + | chr3.1:91324027-91324046 | MS.gene070016:CDS | 50.0% |
| ! | GTGTTGTTGCTCTGACAAGC+TGG | - | chr3.1:91327144-91327163 | None:intergenic | 50.0% |
| ! | TCAGTTTTCTGCAGAGGTGG+AGG | + | chr3.1:91324280-91324299 | MS.gene070016:CDS | 50.0% |
| ! | TCGCAAAGCGTCTCAAAAGG+AGG | + | chr3.1:91327370-91327389 | MS.gene070016:CDS | 50.0% |
| ! | TTGTGGTGGAGCTTCCATCA+TGG | - | chr3.1:91323718-91323737 | None:intergenic | 50.0% |
| !! | AATAGGTCAAGGTGTTGCCG+GGG | + | chr3.1:91325290-91325309 | MS.gene070016:CDS | 50.0% |
| !! | ATGGGTGCCGGTTAATAGAG+GGG | + | chr3.1:91324163-91324182 | MS.gene070016:CDS | 50.0% |
| !! | CTCGTCATTGACTCGGTTCA+AGG | + | chr3.1:91326900-91326919 | MS.gene070016:CDS | 50.0% |
| AAGGGACATGCCAGACCATG+AGG | - | chr3.1:91326323-91326342 | None:intergenic | 55.0% | |
| AGCTGATTAGGGCCCTCAAG+TGG | + | chr3.1:91324099-91324118 | MS.gene070016:CDS | 55.0% | |
| AGGAGAGAAAAGACGGGCCA+AGG | + | chr3.1:91325857-91325876 | MS.gene070016:CDS | 55.0% | |
| ATGGAAGATCCACCAGGTCC+TGG | - | chr3.1:91324071-91324090 | None:intergenic | 55.0% | |
| ATTCCACCGACGCCTAATCC+AGG | + | chr3.1:91324050-91324069 | MS.gene070016:CDS | 55.0% | |
| CCTTCAGGGCTCAACGAATC+GGG | - | chr3.1:91327062-91327081 | None:intergenic | 55.0% | |
| CGCACTACCCGAGATTCAAG+AGG | + | chr3.1:91325071-91325090 | MS.gene070016:CDS | 55.0% | |
| CGGTGTTTGAACAAGGGAGC+AGG | + | chr3.1:91324453-91324472 | MS.gene070016:CDS | 55.0% | |
| CTCGGGTAGTGCGGTTTCAT+AGG | - | chr3.1:91325064-91325083 | None:intergenic | 55.0% | |
| CTCGTGCCGAACATCATTGC+CGG | - | chr3.1:91323907-91323926 | None:intergenic | 55.0% | |
| GAGACCCACGTCTGAGCTAA+AGG | - | chr3.1:91325129-91325148 | None:intergenic | 55.0% | |
| GATCCACCAGGTCCTGGATT+AGG | - | chr3.1:91324065-91324084 | None:intergenic | 55.0% | |
| GCGGTTCCGGTGTTTGAACA+AGG | + | chr3.1:91324446-91324465 | MS.gene070016:CDS | 55.0% | |
| GGAGGACTCAAAGGAGTTGG+TGG | + | chr3.1:91324298-91324317 | MS.gene070016:CDS | 55.0% | |
| GGGTTGCTCGTTGTTCTCCA+AGG | - | chr3.1:91323886-91323905 | None:intergenic | 55.0% | |
| GGTGGAGGACTCAAAGGAGT+TGG | + | chr3.1:91324295-91324314 | MS.gene070016:CDS | 55.0% | |
| GTGGGTCTCTTGCATCCAAC+AGG | + | chr3.1:91325140-91325159 | MS.gene070016:CDS | 55.0% | |
| TAGGGCCCTCAAGTGGATCA+AGG | + | chr3.1:91324106-91324125 | MS.gene070016:CDS | 55.0% | |
| TCGTGCCGAACATCATTGCC+GGG | - | chr3.1:91323906-91323925 | None:intergenic | 55.0% | |
| TGCAGAGGTGGAGGACTCAA+AGG | + | chr3.1:91324289-91324308 | MS.gene070016:CDS | 55.0% | |
| TGCCCCTCCTTGTACTGAAC+AGG | + | chr3.1:91323935-91323954 | MS.gene070016:CDS | 55.0% | |
| TGCTCGTTGTTCTCCAAGGC+AGG | - | chr3.1:91323882-91323901 | None:intergenic | 55.0% | |
| ! | ACTCGGTTCAAGGTGCCTCT+GGG | + | chr3.1:91326910-91326929 | MS.gene070016:CDS | 55.0% |
| ! | GGCAGCCATCTTTTCCCTGT+TGG | - | chr3.1:91325158-91325177 | None:intergenic | 55.0% |
| ! | TGTCGGTTGAGAAGCACGGT+TGG | - | chr3.1:91325332-91325351 | None:intergenic | 55.0% |
| !! | ATAGGTCAAGGTGTTGCCGG+GGG | + | chr3.1:91325291-91325310 | MS.gene070016:CDS | 55.0% |
| !! | GACTCAAAGGAGTTGGTGGC+GGG | + | chr3.1:91324302-91324321 | MS.gene070016:CDS | 55.0% |
| !! | GGACTCAAAGGAGTTGGTGG+CGG | + | chr3.1:91324301-91324320 | MS.gene070016:CDS | 55.0% |
| ACGCCTAATCCAGGACCTGG+TGG | + | chr3.1:91324059-91324078 | MS.gene070016:CDS | 60.0% | |
| GGGCTCAACGAATCGGGATC+TGG | - | chr3.1:91327056-91327075 | None:intergenic | 60.0% | |
| ! | CCAGGTCCTGGATTAGGCGT+CGG | - | chr3.1:91324059-91324078 | None:intergenic | 60.0% |
| ! | CCCGATTCGTTGAGCCCTGA+AGG | + | chr3.1:91327059-91327078 | MS.gene070016:CDS | 60.0% |
| ! | GACTCGGTTCAAGGTGCCTC+TGG | + | chr3.1:91326909-91326928 | MS.gene070016:CDS | 60.0% |
| CCGACGCCTAATCCAGGACC+TGG | + | chr3.1:91324056-91324075 | MS.gene070016:CDS | 65.0% | |
| !! | GAGTTGGTGGCGGGTTTGCC+TGG | + | chr3.1:91324311-91324330 | MS.gene070016:CDS | 65.0% |
| !! | GGTCCTGGATTAGGCGTCGG+TGG | - | chr3.1:91324056-91324075 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 91323675 | 91327682 | 91323675 | ID=MS.gene070016 |
| chr3.1 | mRNA | 91323675 | 91327682 | 91323675 | ID=MS.gene070016.t1;Parent=MS.gene070016 |
| chr3.1 | exon | 91323675 | 91324562 | 91323675 | ID=MS.gene070016.t1.exon1;Parent=MS.gene070016.t1 |
| chr3.1 | CDS | 91323675 | 91324562 | 91323675 | ID=cds.MS.gene070016.t1;Parent=MS.gene070016.t1 |
| chr3.1 | exon | 91324916 | 91324963 | 91324916 | ID=MS.gene070016.t1.exon2;Parent=MS.gene070016.t1 |
| chr3.1 | CDS | 91324916 | 91324963 | 91324916 | ID=cds.MS.gene070016.t1;Parent=MS.gene070016.t1 |
| chr3.1 | exon | 91325048 | 91325957 | 91325048 | ID=MS.gene070016.t1.exon3;Parent=MS.gene070016.t1 |
| chr3.1 | CDS | 91325048 | 91325957 | 91325048 | ID=cds.MS.gene070016.t1;Parent=MS.gene070016.t1 |
| chr3.1 | exon | 91326799 | 91327682 | 91326799 | ID=MS.gene070016.t1.exon4;Parent=MS.gene070016.t1 |
| chr3.1 | CDS | 91326799 | 91327682 | 91326799 | ID=cds.MS.gene070016.t1;Parent=MS.gene070016.t1 |
| Gene Sequence |
| Protein sequence |
