AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene69323

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene69323.t1 MTR_3g115400 97.250 909 25 0 1 909 1 909 0.0 1826
MS.gene69323.t1 MTR_0022s0430 35.185 918 484 25 20 907 17 853 7.95e-149 461
MS.gene69323.t1 MTR_0022s0430 38.005 792 410 21 143 907 1 738 1.05e-145 449
MS.gene69323.t1 MTR_1g100970 42.241 580 300 11 135 701 40 597 1.88e-135 427
MS.gene69323.t1 MTR_1g100970 45.946 74 39 1 818 891 806 878 2.29e-13 74.7
MS.gene69323.t1 MTR_1g100970 42.241 580 300 11 135 701 120 677 7.05e-135 428
MS.gene69323.t1 MTR_1g100970 45.946 74 39 1 818 891 886 958 2.90e-13 74.7
MS.gene69323.t1 MTR_4g068000 33.541 802 447 20 138 896 146 904 2.14e-126 404
MS.gene69323.t1 MTR_2g099350 40.219 547 277 14 134 665 167 678 2.14e-118 384
MS.gene69323.t1 MTR_5g099060 40.000 475 218 14 29 487 27 450 3.73e-85 293
MS.gene69323.t1 MTR_5g099060 45.714 315 158 6 584 895 607 911 3.12e-67 242
MS.gene69323.t1 MTR_1g100970 41.895 401 202 8 314 701 7 389 1.50e-81 278
MS.gene69323.t1 MTR_1g100970 45.946 74 39 1 818 891 598 670 1.05e-13 75.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene69323.t1 AT1G20640 48.485 891 380 19 21 900 7 829 0.0 728
MS.gene69323.t1 AT1G20640 48.485 891 380 19 21 900 7 829 0.0 728
MS.gene69323.t1 AT1G20640 48.485 891 380 19 21 900 7 829 0.0 728
MS.gene69323.t1 AT1G76350 46.189 879 360 18 25 892 11 787 0.0 709
MS.gene69323.t1 AT1G76350 46.189 879 360 18 25 892 11 787 0.0 709
MS.gene69323.t1 AT1G76350 46.189 879 360 18 25 892 11 787 0.0 709
MS.gene69323.t1 AT1G76350 46.189 879 360 18 25 892 11 787 0.0 709
MS.gene69323.t1 AT4G35270 42.251 942 461 20 23 899 23 946 0.0 664
MS.gene69323.t1 AT4G35270 42.251 942 461 20 23 899 23 946 0.0 664
MS.gene69323.t1 AT4G35270 42.251 942 461 20 23 899 23 946 0.0 664
MS.gene69323.t1 AT4G35270 42.251 942 461 20 23 899 23 946 0.0 664
MS.gene69323.t1 AT2G17150 41.575 914 452 18 23 899 27 895 0.0 637
MS.gene69323.t1 AT2G17150 41.575 914 452 18 23 899 27 895 0.0 637
MS.gene69323.t1 AT2G17150 41.301 661 328 13 276 899 3 640 6.86e-144 442
MS.gene69323.t1 AT2G17150 39.394 627 320 12 23 615 27 627 4.62e-134 416
MS.gene69323.t1 AT1G64530 42.729 557 286 9 126 667 92 630 4.90e-134 422
MS.gene69323.t1 AT1G64530 41.558 77 42 3 818 893 744 818 4.16e-11 67.4
MS.gene69323.t1 AT2G17150 39.365 630 319 13 23 615 27 630 6.74e-133 413
MS.gene69323.t1 AT2G17150 39.365 630 319 13 23 615 27 630 6.74e-133 413
MS.gene69323.t1 AT4G24020 40.909 594 305 13 139 709 147 717 7.15e-123 396
MS.gene69323.t1 AT4G24020 40.000 90 53 1 818 907 866 954 3.41e-14 77.8
MS.gene69323.t1 AT1G64530 43.827 486 244 6 196 667 5 475 3.02e-122 386
MS.gene69323.t1 AT1G64530 41.096 73 41 2 818 889 589 660 4.11e-11 67.4
MS.gene69323.t1 AT2G43500 39.483 542 285 11 138 671 162 668 4.30e-121 390
MS.gene69323.t1 AT2G43500 39.483 542 285 11 138 671 162 668 4.30e-121 390
MS.gene69323.t1 AT2G43500 39.483 542 285 11 138 671 162 668 4.30e-121 390
MS.gene69323.t1 AT2G43500 39.483 542 285 11 138 671 162 668 4.30e-121 390
MS.gene69323.t1 AT2G43500 39.483 542 285 11 138 671 162 668 4.30e-121 390
MS.gene69323.t1 AT2G43500 39.483 542 285 11 138 671 162 668 4.30e-121 390
MS.gene69323.t1 AT2G43500 39.483 542 285 11 138 671 162 668 4.30e-121 390
MS.gene69323.t1 AT2G43500 39.483 542 285 11 138 671 162 668 4.30e-121 390
MS.gene69323.t1 AT2G43500 38.739 555 284 12 138 671 162 681 5.51e-118 382
MS.gene69323.t1 AT2G43500 38.739 555 284 12 138 671 162 681 5.51e-118 382
MS.gene69323.t1 AT2G43500 38.378 555 286 12 138 671 162 681 1.06e-116 379
MS.gene69323.t1 AT3G59580 38.798 549 281 13 138 671 105 613 9.95e-116 375
MS.gene69323.t1 AT3G59580 38.798 549 281 13 138 671 105 613 9.95e-116 375
MS.gene69323.t1 AT3G59580 38.798 549 281 13 138 671 105 613 9.95e-116 375
MS.gene69323.t1 AT4G24020 40.351 456 230 10 277 709 1 437 7.08e-81 276
MS.gene69323.t1 AT4G24020 40.000 90 53 1 818 907 586 674 2.34e-14 77.8
MS.gene69323.t1 AT4G38340 40.000 340 185 7 137 473 41 364 3.55e-70 246
MS.gene69323.t1 AT4G38340 77.381 84 19 0 585 668 419 502 5.26e-34 140
MS.gene69323.t1 AT4G38340 50.538 93 40 3 807 896 597 686 6.19e-17 86.3
MS.gene69323.t1 AT4G38340 40.000 340 185 7 137 473 112 435 1.63e-69 246
MS.gene69323.t1 AT4G38340 77.381 84 19 0 585 668 490 573 8.42e-34 140
MS.gene69323.t1 AT4G38340 50.538 93 40 3 807 896 668 757 6.86e-17 86.3

Find 221 sgRNAs with CRISPR-Local

Find 345 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAATTCGATATCAAATATT+TGG 0.153465 3.3:+94138375 MS.gene69323:CDS
AAGATATGCTTATACAAATA+TGG 0.190554 3.3:+94134461 MS.gene69323:CDS
GTTTCCTGGCTTTGTGATCT+TGG 0.257901 3.3:-94138157 None:intergenic
GACCTTGATTCAAGTGAAAA+AGG 0.270581 3.3:-94134535 None:intergenic
GACTCGGTTCAAGGTGCCTC+TGG 0.272348 3.3:+94137770 MS.gene69323:CDS
GTTTGCCTGGTCGAGTTTAT+AGG 0.274228 3.3:+94134641 MS.gene69323:CDS
CTTGATTCAGAGTTGAGATT+AGG 0.293147 3.3:-94137862 None:intergenic
TCTTCATAACGCCAATTCTT+TGG 0.293995 3.3:-94138307 None:intergenic
TCTCATCATGCCAGGTTGTT+TGG 0.296000 3.3:+94135702 MS.gene69323:CDS
CTTGCGAGTTATAACAAATA+AGG 0.307272 3.3:+94135881 MS.gene69323:CDS
TTGATTTATTATCTTGAATC+AGG 0.308616 3.3:-94138126 None:intergenic
CCTTATCAGCTTCTCTGTTA+TGG 0.316161 3.3:-94134404 None:intergenic
GGTGATTTCGATGCACCTTC+AGG 0.318756 3.3:-94137935 None:intergenic
GGGTAACTTCTTGTCAAGTT+TGG 0.320273 3.3:+94136139 MS.gene69323:CDS
AACTTGTGATGCAGATTTAG+AGG 0.322889 3.3:+94138423 MS.gene69323:CDS
AGAACTCCTGATAAAATTAC+TGG 0.324430 3.3:-94138506 None:intergenic
GTGATGGCCGTTGCTGATAT+TGG 0.327958 3.3:+94135936 MS.gene69323:CDS
TTGATTCAGAGTTGAGATTA+GGG 0.328089 3.3:-94137861 None:intergenic
TTCATTCTCTTGGCCTGCCT+TGG 0.333817 3.3:+94134183 MS.gene69323:CDS
GGTGTTCACCAAGTGTTTCC+TGG 0.335547 3.3:-94138171 None:intergenic
AATTCTTTGGCAACCTAAAC+CGG 0.340512 3.3:-94138294 None:intergenic
GTATTAAGCGTTGGCCTTCT+CGG 0.340723 3.3:+94137699 MS.gene69323:CDS
CAAGAAAGTCTTACTTTAAG+AGG 0.342735 3.3:+94136077 MS.gene69323:CDS
TCAAAGATTGGATTGGAAAA+AGG 0.346376 3.3:-94134157 None:intergenic
GTTTGAGTTTAAGACTCATT+TGG 0.347090 3.3:+94134321 MS.gene69323:CDS
ACAAGGGAGCAGGACATGTT+TGG 0.349788 3.3:+94134780 MS.gene69323:CDS
TTCCTTCTATTCAAAATTCT+CGG 0.352144 3.3:+94137808 MS.gene69323:CDS
CTATCGTCTCCAAATTTATC+AGG 0.353197 3.3:+94137833 MS.gene69323:CDS
ATGGAGCATCACTTGTTAAT+AGG 0.355386 3.3:+94135591 MS.gene69323:CDS
GGTAACTTCTTGTCAAGTTT+GGG 0.360621 3.3:+94136140 MS.gene69323:CDS
TTTGAGTTTAAGACTCATTT+GGG 0.363096 3.3:+94134322 MS.gene69323:CDS
AAAGATGCTGCAAAGAATAT+TGG 0.364050 3.3:+94136251 MS.gene69323:CDS
GAGTTGGTGGCGGGTTTGCC+TGG 0.366616 3.3:+94134628 MS.gene69323:CDS
CACCTGATGTTCGATTCTTC+AGG 0.370588 3.3:+94134683 MS.gene69323:CDS
AGGGTGGTTCCTGATAAATT+TGG 0.376289 3.3:-94137842 None:intergenic
GAGACGAGAAAACCCGGTTT+AGG 0.376446 3.3:+94138281 MS.gene69323:CDS
TCTTTGACCCTTCATTCTCT+TGG 0.378297 3.3:+94134173 MS.gene69323:CDS
GTGAAGGGGTTAGTAGGTTG+TGG 0.382908 3.3:+94134344 MS.gene69323:CDS
TTTGCCTGGTCGAGTTTATA+GGG 0.385793 3.3:+94134642 MS.gene69323:CDS
CAAGAGGATGGCTGTCTCAT+TGG 0.386966 3.3:+94135995 MS.gene69323:CDS
GTGGGTCTCTTGCATCCAAC+AGG 0.388191 3.3:+94135458 MS.gene69323:CDS
TTCCAGCGAAATATTGTCTA+AGG 0.388915 3.3:-94136223 None:intergenic
TTAATAGGTCAAGGTGTTGC+CGG 0.393576 3.3:+94135606 MS.gene69323:CDS
CATAGAGTAAAAGTTACATT+TGG 0.399282 3.3:+94138259 MS.gene69323:CDS
ACAACACAGCAGAGCAACTA+TGG 0.400513 3.3:+94134823 MS.gene69323:CDS
GGTTTAGGTTGCCAAAGAAT+TGG 0.400528 3.3:+94138296 MS.gene69323:CDS
GAGTGTTCTCCTTCCGTTGA+GGG 0.401877 3.3:+94136119 MS.gene69323:CDS
CCATAACAGAGAAGCTGATA+AGG 0.402380 3.3:+94134404 MS.gene69323:CDS
AGTGGATCAAAGATTTCAAT+AGG 0.403479 3.3:+94134434 MS.gene69323:CDS
AGTTATAACAAATAAGGAAT+TGG 0.408257 3.3:+94135887 MS.gene69323:CDS
CGGCTTTCCTGTTCAGTACA+TGG 0.410252 3.3:-94134259 None:intergenic
CTCGGGTAGTGCGGTTTCAT+AGG 0.417672 3.3:-94135379 None:intergenic
GAAATCTTTGATCCACTTGA+GGG 0.419150 3.3:-94134428 None:intergenic
GTCTGGTAACAAAGATTCAT+TGG 0.422317 3.3:+94138042 MS.gene69323:CDS
TGCTCGTTGTTCTCCAAGGC+AGG 0.422575 3.3:-94134196 None:intergenic
GAGAATGAAGGGTCAAAGAT+TGG 0.423559 3.3:-94134169 None:intergenic
AGATCATTAGCTCTCAGAAT+TGG 0.423575 3.3:-94134511 None:intergenic
AACAATGTCTAGAAAGTTCT+CGG 0.424847 3.3:+94136040 MS.gene69323:CDS
ATTTGGGTGAAGGGGTTAGT+AGG 0.424980 3.3:+94134338 MS.gene69323:CDS
TGGAGCTTCCATCATGGTAT+TGG 0.425349 3.3:-94134026 None:intergenic
GATATCTCACAGAGATTTCT+CGG 0.426588 3.3:-94134576 None:intergenic
CAAGGGAGCAGGACATGTTT+GGG 0.427327 3.3:+94134781 MS.gene69323:CDS
TGCTCCTCCATGTACTGAAC+AGG 0.433075 3.3:+94134252 MS.gene69323:CDS
CTCGTCATTGACTCGGTTCA+AGG 0.434191 3.3:+94137761 MS.gene69323:CDS
GGGCTCAACGAATCGGGATC+TGG 0.434923 3.3:-94137914 None:intergenic
TAATAGGTCAAGGTGTTGCC+GGG 0.435218 3.3:+94135607 MS.gene69323:CDS
ACCTTCAGGGCTCAACGAAT+CGG 0.436452 3.3:-94137921 None:intergenic
TGGTTGGAAGCTTCTGCTGA+TGG 0.437275 3.3:+94134109 MS.gene69323:CDS
ACACGGAACATTAGCGGTTC+CGG 0.438801 3.3:+94134750 MS.gene69323:CDS
CTCGTGCCGAACATCATTGC+CGG 0.439855 3.3:-94134221 None:intergenic
GTTGTTGATCTCAGCAGCTC+TGG 0.440941 3.3:+94135234 MS.gene69323:CDS
TTGCTATGTTGGTGATTCTT+CGG 0.441455 3.3:+94135545 MS.gene69323:CDS
CTATCATCCCCTCTATTAAC+CGG 0.442227 3.3:-94134487 None:intergenic
ATTGTCCATGATTATTCAAA+GGG 0.447950 3.3:+94135848 MS.gene69323:CDS
ATTTGGACGATGATTATGAA+TGG 0.449463 3.3:+94138392 MS.gene69323:CDS
CTCAGAACCTCTTGAATCTC+GGG 0.451350 3.3:-94135396 None:intergenic
GGCTGTATGCTTAATGAGAC+TGG 0.451702 3.3:-94137893 None:intergenic
AGATATGCTTATACAAATAT+GGG 0.453741 3.3:+94134462 MS.gene69323:CDS
CCTTCAGGGCTCAACGAATC+GGG 0.455000 3.3:-94137920 None:intergenic
GACTCAAAGGAGTTGGTGGC+GGG 0.455558 3.3:+94134619 MS.gene69323:CDS
GGAACATGAATGGCTTGAAT+AGG 0.455976 3.3:-94137981 None:intergenic
TGCAAACAGTCTCAAGTTCA+CGG 0.457700 3.3:-94134846 None:intergenic
CAGCATTATTAACTATAATC+CGG 0.460364 3.3:-94134279 None:intergenic
CATTGTCCATGATTATTCAA+AGG 0.467851 3.3:+94135847 MS.gene69323:CDS
GATCCACCAGGTCCTGGATT+AGG 0.474573 3.3:-94134379 None:intergenic
AGCAACCCGGCAATGATGTT+CGG 0.474729 3.3:+94134215 MS.gene69323:CDS
TGCATCCAACAGGGAAAAGA+TGG 0.475400 3.3:+94135468 MS.gene69323:CDS
TCACTGTCATTGCAATCTAC+AGG 0.475999 3.3:-94135801 None:intergenic
GAGGAGATGTTGACTGTGGT+AGG 0.478292 3.3:+94136096 MS.gene69323:CDS
ACCACAAGATGAAAATTCAA+TGG 0.483142 3.3:+94134048 MS.gene69323:CDS
GAGACCCACGTCTGAGCTAA+AGG 0.485407 3.3:-94135444 None:intergenic
ATGTTGGTGATTCTTCGGTC+AGG 0.486077 3.3:+94135550 MS.gene69323:CDS
GTGTTGTTGCTCTGACAAGC+TGG 0.486344 3.3:-94138002 None:intergenic
ATATGGGTGCCGGTTAATAG+AGG 0.486599 3.3:+94134478 MS.gene69323:CDS
CGGTTAATAGAGGGGATGAT+AGG 0.488453 3.3:+94134488 MS.gene69323:CDS
CATAACAGAGAAGCTGATAA+GGG 0.488496 3.3:+94134405 MS.gene69323:CDS
CTCCTGAAGAATCGAACATC+AGG 0.489431 3.3:-94134685 None:intergenic
AGGAGAGAAAAGACGGGCCA+AGG 0.490415 3.3:+94136175 MS.gene69323:CDS
GTCCTTAGACAATATTTCGC+TGG 0.494295 3.3:+94136221 MS.gene69323:CDS
TCTTAAACTCAAACTGCTGC+AGG 0.496219 3.3:-94134312 None:intergenic
TTTGGACGATGATTATGAAT+GGG 0.496780 3.3:+94138393 MS.gene69323:CDS
GTGATTTCGATGCACCTTCA+GGG 0.498166 3.3:-94137934 None:intergenic
GGTAACAAAGATTCATTGGT+TGG 0.498700 3.3:+94138046 MS.gene69323:CDS
GCACACCCTTTGAATAATCA+TGG 0.498968 3.3:-94135853 None:intergenic
ATGGAAGATCCACCAGGTCC+TGG 0.499029 3.3:-94134385 None:intergenic
TGAAGGGTCAAAGATTGGAT+TGG 0.499145 3.3:-94134164 None:intergenic
CACACAAACAATGTTGCGTC+TGG 0.501686 3.3:+94138025 MS.gene69323:CDS
TCTCAGAACCTCTTGAATCT+CGG 0.503095 3.3:-94135397 None:intergenic
GGACTCAAAGGAGTTGGTGG+CGG 0.508229 3.3:+94134618 MS.gene69323:CDS
CAACTCTGAAAAGGATCTGC+AGG 0.508919 3.3:+94137669 MS.gene69323:CDS
CCCGATTCGTTGAGCCCTGA+AGG 0.511003 3.3:+94137920 MS.gene69323:CDS
AGGAGATGTTGACTGTGGTA+GGG 0.511843 3.3:+94136097 MS.gene69323:CDS
AGTTTGGGAGTAAATAGAAC+AGG 0.512927 3.3:+94136155 MS.gene69323:CDS
CTGACAAGCTGGAACATGAA+TGG 0.515320 3.3:-94137991 None:intergenic
TCTGTACTACAACTCTGAAA+AGG 0.515505 3.3:+94137660 MS.gene69323:CDS
CACTCGCAAAGCGTCTCAAA+AGG 0.517406 3.3:+94138228 MS.gene69323:CDS
GGGTTGCTCGTTGTTCTCCA+AGG 0.518849 3.3:-94134200 None:intergenic
GGGTTGCAGACAAAGTTTGA+TGG 0.518963 3.3:-94138482 None:intergenic
CGGATTATAGTTAATAATGC+TGG 0.519737 3.3:+94134280 MS.gene69323:CDS
TTAAGACTCATTTGGGTGAA+GGG 0.525792 3.3:+94134329 MS.gene69323:CDS
AGATTTCTCGGTACTTTGCA+AGG 0.526853 3.3:-94134564 None:intergenic
ATCCACTGTCTCATCATGCC+AGG 0.527462 3.3:+94135694 MS.gene69323:CDS
TTTAAGACTCATTTGGGTGA+AGG 0.528588 3.3:+94134328 MS.gene69323:CDS
CGGTGTTTGAACAAGGGAGC+AGG 0.529135 3.3:+94134770 MS.gene69323:CDS
TGAAATCTTTGATCCACTTG+AGG 0.531373 3.3:-94134429 None:intergenic
GCGGTTCCGGTGTTTGAACA+AGG 0.534054 3.3:+94134763 MS.gene69323:CDS
GTGGAGTATGCTTGCTATGT+TGG 0.534634 3.3:+94135534 MS.gene69323:CDS
GGTCCTGGATTAGGCGTTGG+TGG 0.534809 3.3:-94134370 None:intergenic
AAGGCAGGCCAAGAGAATGA+AGG 0.539487 3.3:-94134181 None:intergenic
GCGTTATGAAGATCTTGTGC+AGG 0.540519 3.3:+94138318 MS.gene69323:CDS
GCTTATACAAATATGGGTGC+CGG 0.542004 3.3:+94134468 MS.gene69323:CDS
AACAGGGAAAAGATGGCTGC+CGG 0.543888 3.3:+94135475 MS.gene69323:CDS
AGCTGATAAGGGCCCTCAAG+TGG 0.545368 3.3:+94134416 MS.gene69323:CDS
ACTCGGTTCAAGGTGCCTCT+GGG 0.547073 3.3:+94137771 MS.gene69323:CDS
TGTAATTATCATCAGAGTGC+CGG 0.547779 3.3:-94135494 None:intergenic
TAATAAGGACTTGCGATACT+CGG 0.548860 3.3:-94138200 None:intergenic
CATGCCAAGATCACAAAGCC+AGG 0.549068 3.3:+94138153 MS.gene69323:CDS
TGCTGCAGATGTAATTCAGT+CGG 0.549867 3.3:+94135962 MS.gene69323:CDS
CCAGGTCCTGGATTAGGCGT+TGG 0.550312 3.3:-94134373 None:intergenic
GGAGGACTCAAAGGAGTTGG+TGG 0.551490 3.3:+94134615 MS.gene69323:CDS
ATTCTTTGGCAACCTAAACC+GGG 0.553102 3.3:-94138293 None:intergenic
TTTGTTAGATGGTTGTTGGT+TGG 0.554167 3.3:+94134093 MS.gene69323:CDS
CTGAGATACTATAGATACTT+CGG 0.554550 3.3:-94135752 None:intergenic
CTTATCATCTAATGAAGTGA+TGG 0.555317 3.3:+94135920 MS.gene69323:CDS
CTCTTGAATCTCGGGTAGTG+CGG 0.556527 3.3:-94135388 None:intergenic
TGCAGAGGTGGAGGACTCAA+AGG 0.557266 3.3:+94134606 MS.gene69323:CDS
ATTCCACCAACGCCTAATCC+AGG 0.557897 3.3:+94134367 MS.gene69323:CDS
CATTTGGAGACGAGAAAACC+CGG 0.558546 3.3:+94138275 MS.gene69323:CDS
TAAGACTCATTTGGGTGAAG+GGG 0.560800 3.3:+94134330 MS.gene69323:CDS
GTTTGTCATAAAAGCACCCC+CGG 0.561641 3.3:-94135625 None:intergenic
GGTGGAGGACTCAAAGGAGT+TGG 0.562364 3.3:+94134612 MS.gene69323:CDS
TTACACACACTGTATATCTC+CGG 0.564968 3.3:+94135512 MS.gene69323:CDS
TCGTGCCGAACATCATTGCC+GGG 0.569558 3.3:-94134220 None:intergenic
CTTGCTTAAAGAAGTAATGT+CGG 0.569630 3.3:-94135664 None:intergenic
ATCTTGTGCAGGAAATTGCT+AGG 0.569881 3.3:+94138329 MS.gene69323:CDS
GATGCTGCAAAGAATATTGG+CGG 0.571710 3.3:+94136254 MS.gene69323:CDS
GACTGTTTGCAAAGCGCTAG+AGG 0.574356 3.3:+94134858 MS.gene69323:CDS
TTGTGGTGGAGCTTCCATCA+TGG 0.576729 3.3:-94134032 None:intergenic
AGACAGCCATCCTCTTGTGT+TGG 0.577568 3.3:-94135989 None:intergenic
ATCTGCAACCAATACCATGA+TGG 0.578563 3.3:+94134018 MS.gene69323:CDS
GGCAACACGGTATTAAGCGT+TGG 0.579088 3.3:+94137690 MS.gene69323:CDS
AGCATACCCATCATGGGAGA+TGG 0.583903 3.3:+94133980 None:intergenic
GGAAGTCAGACTACATGAAG+AGG 0.584647 3.3:-94137960 None:intergenic
ATAGAACAGGAGAGAAAAGA+CGG 0.585692 3.3:+94136168 MS.gene69323:CDS
CATGTACTGAACAGGAAAGC+CGG 0.586722 3.3:+94134260 MS.gene69323:CDS
CATCACTTGTTAATAGGTCA+AGG 0.586973 3.3:+94135597 MS.gene69323:CDS
TGTCGGTTGAGAAGCACGGT+TGG 0.589014 3.3:-94135647 None:intergenic
CGGTTCCGGTGTTTGAACAA+GGG 0.589544 3.3:+94134764 MS.gene69323:CDS
CGAACATCAGGTGTCCACTC+AGG 0.589765 3.3:-94134673 None:intergenic
TATGGGTGCCGGTTAATAGA+GGG 0.590546 3.3:+94134479 MS.gene69323:CDS
TCACAAAGCCAGGAAACACT+TGG 0.593082 3.3:+94138163 MS.gene69323:CDS
AGGATGGCTGTCTCATTGGA+TGG 0.593239 3.3:+94135999 MS.gene69323:CDS
ACTCCTGATAAAATTACTGG+AGG 0.593662 3.3:-94138503 None:intergenic
AGGCAGGCCAAGAGAATGAA+GGG 0.595697 3.3:-94134180 None:intergenic
TTGTTATAACTCGCAAGCTG+CGG 0.597685 3.3:-94135875 None:intergenic
AGCTCGCAATCCAAACAACC+TGG 0.599497 3.3:-94135712 None:intergenic
ACTTCAACTCGTCATTGACT+CGG 0.601900 3.3:+94137754 MS.gene69323:CDS
AATAGGTCAAGGTGTTGCCG+GGG 0.604344 3.3:+94135608 MS.gene69323:CDS
CTCCTGATAAAATTACTGGA+GGG 0.605907 3.3:-94138502 None:intergenic
CTAGAAAGTTCTCGGAACAA+AGG 0.606403 3.3:+94136048 MS.gene69323:CDS
CAGACGCAACATTGTTTGTG+TGG 0.607061 3.3:-94138024 None:intergenic
TTATCCCTATAAACTCGACC+AGG 0.609566 3.3:-94134646 None:intergenic
AGCAAATCCAATATCAGCAA+CGG 0.611864 3.3:-94135943 None:intergenic
GGAGTGTTCTCCTTCCGTTG+AGG 0.611994 3.3:+94136118 MS.gene69323:CDS
CCAACGCCTAATCCAGGACC+TGG 0.614235 3.3:+94134373 MS.gene69323:CDS
CTGCTCCCTTGTTCAAACAC+CGG 0.615580 3.3:-94134769 None:intergenic
TGATGTACACGGAACATTAG+CGG 0.615722 3.3:+94134744 MS.gene69323:CDS
TCTGTTATGGAAGATCCACC+AGG 0.616650 3.3:-94134391 None:intergenic
ATAGATACTTCGGAGTCGAA+TGG 0.619918 3.3:-94135742 None:intergenic
AATTGCCTTTAGCTCAGACG+TGG 0.620316 3.3:+94135439 MS.gene69323:CDS
TGACAAGAAGTTACCCTCAA+CGG 0.620322 3.3:-94136132 None:intergenic
TCGCAAAGCGTCTCAAAAGG+AGG 0.621421 3.3:+94138231 MS.gene69323:CDS
TTGGAGAACAACGAGCAACC+CGG 0.622537 3.3:+94134202 MS.gene69323:CDS
AGTCGGAACTCCAACACAAG+AGG 0.629939 3.3:+94135979 MS.gene69323:CDS
GACGAGTTGAAGTTTCTGCA+AGG 0.629978 3.3:-94137744 None:intergenic
ATTCAGAGTTGAGATTAGGG+TGG 0.634639 3.3:-94137858 None:intergenic
ACATAGCAAGCATACTCCAC+CGG 0.635320 3.3:-94135531 None:intergenic
GTACATCACACTCTTGAGCA+TGG 0.639396 3.3:-94134729 None:intergenic
GCTCAAGAGTGTGATGTACA+CGG 0.639508 3.3:+94134733 MS.gene69323:CDS
TCTTGAGCATGGTCAACTCG+TGG 0.640513 3.3:-94134718 None:intergenic
CGCACTACCCGAGATTCAAG+AGG 0.642440 3.3:+94135389 MS.gene69323:CDS
AAGAAGTTACCCTCAACGGA+AGG 0.646367 3.3:-94136128 None:intergenic
TAGAACAGGAGAGAAAAGAC+GGG 0.649215 3.3:+94136169 MS.gene69323:CDS
GTCAGACTACATGAAGAGGA+AGG 0.650160 3.3:-94137956 None:intergenic
GGAACTCCAACACAAGAGGA+TGG 0.651641 3.3:+94135983 MS.gene69323:CDS
AAAAGGATCTGCAGGCAACA+CGG 0.653871 3.3:+94137677 MS.gene69323:CDS
CTTTCCTGTTCAGTACATGG+AGG 0.656242 3.3:-94134256 None:intergenic
GAAAGTTCTCGGAACAAAGG+CGG 0.656927 3.3:+94136051 MS.gene69323:CDS
CACACACTGTATATCTCCGG+TGG 0.659877 3.3:+94135515 MS.gene69323:CDS
ATTGCCTTTAGCTCAGACGT+GGG 0.661550 3.3:+94135440 MS.gene69323:CDS
ATAGGTCAAGGTGTTGCCGG+GGG 0.662191 3.3:+94135609 MS.gene69323:CDS
TTCAAGTCTTCAGAATGTGA+AGG 0.663202 3.3:+94135260 MS.gene69323:CDS
ATGTTTGGGAGTTATTGAAG+TGG 0.676259 3.3:+94134795 MS.gene69323:CDS
TTAAGAGGAGATGTTGACTG+TGG 0.679381 3.3:+94136092 MS.gene69323:CDS
ATGGGTGCCGGTTAATAGAG+GGG 0.680121 3.3:+94134480 MS.gene69323:CDS
TGGGTCTCTTGCATCCAACA+GGG 0.683646 3.3:+94135459 MS.gene69323:CDS
ACGCCTAATCCAGGACCTGG+TGG 0.693296 3.3:+94134376 MS.gene69323:CDS
GTAATGTCGGTTGAGAAGCA+CGG 0.695561 3.3:-94135651 None:intergenic
ATCAATTTGAAATGACCCAG+AGG 0.697023 3.3:-94137786 None:intergenic
AACCTGGCATGATGAGACAG+TGG 0.699432 3.3:-94135696 None:intergenic
ATAGGGATAAGATTCCTGAG+TGG 0.764696 3.3:+94134659 MS.gene69323:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTATCATATATTTTTGT+AGG - chr3.3:94137046-94137065 None:intergenic 10.0%
!! ACATTATGTAAAACTTAATT+TGG - chr3.3:94136514-94136533 None:intergenic 15.0%
!! AGTACAAAAAAATAATATAG+GGG - chr3.3:94136441-94136460 None:intergenic 15.0%
!! CAGTACAAAAAAATAATATA+GGG - chr3.3:94136442-94136461 None:intergenic 15.0%
!! TCAGTACAAAAAAATAATAT+AGG - chr3.3:94136443-94136462 None:intergenic 15.0%
!!! TTTACATTTAATTCACTTTT+AGG + chr3.3:94137504-94137523 MS.gene69323:intron 15.0%
!! AAGATATGCTTATACAAATA+TGG + chr3.3:94134461-94134480 MS.gene69323:CDS 20.0%
!! AGATATGCTTATACAAATAT+GGG + chr3.3:94134462-94134481 MS.gene69323:CDS 20.0%
!! AGTTATAACAAATAAGGAAT+TGG + chr3.3:94135887-94135906 MS.gene69323:CDS 20.0%
!! CAAATTCGATATCAAATATT+TGG + chr3.3:94138375-94138394 MS.gene69323:CDS 20.0%
!! CATTTCAATATAAATGCTTA+TGG + chr3.3:94135113-94135132 MS.gene69323:intron 20.0%
!! TATGATAAAATTAAAGTGAC+CGG + chr3.3:94137055-94137074 MS.gene69323:intron 20.0%
!! TCTAACTTGAAATTAGAATT+TGG + chr3.3:94137438-94137457 MS.gene69323:intron 20.0%
!! TTATATTGAAATGTGTAACA+AGG - chr3.3:94135106-94135125 None:intergenic 20.0%
!! TTGATTTATTATCTTGAATC+AGG - chr3.3:94138129-94138148 None:intergenic 20.0%
!!! GATTTTTCAATCAAAGATTT+GGG - chr3.3:94137115-94137134 None:intergenic 20.0%
!!! TTTTACATAATGTGACTTAA+AGG + chr3.3:94136521-94136540 MS.gene69323:intron 20.0%
!!! TTTTAGAACAGTGAATTTAA+GGG + chr3.3:94134987-94135006 MS.gene69323:intron 20.0%
!!! TTTTTTTGTACTGAACATAT+AGG + chr3.3:94136449-94136468 MS.gene69323:intron 20.0%
! AAAATTGATGAGTAGAACAT+AGG - chr3.3:94136386-94136405 None:intergenic 25.0%
! AACAAAATCTTAAAGGACTA+CGG + chr3.3:94136558-94136577 MS.gene69323:intron 25.0%
! AACTTGAAACAAAGAACTTA+TGG + chr3.3:94134964-94134983 MS.gene69323:intron 25.0%
! AATGTAAAACAATAAACCCA+TGG - chr3.3:94137492-94137511 None:intergenic 25.0%
! ATTGTCCATGATTATTCAAA+GGG + chr3.3:94135848-94135867 MS.gene69323:CDS 25.0%
! CAGCATTATTAACTATAATC+CGG - chr3.3:94134282-94134301 None:intergenic 25.0%
! CATAGAGTAAAAGTTACATT+TGG + chr3.3:94138259-94138278 MS.gene69323:CDS 25.0%
! GAAAAATTCAATTCAACAGA+TGG - chr3.3:94137638-94137657 None:intergenic 25.0%
! TCCAAGTTAATAGCATATAA+CGG + chr3.3:94137013-94137032 MS.gene69323:intron 25.0%
! TTCCTTCTATTCAAAATTCT+CGG + chr3.3:94137808-94137827 MS.gene69323:CDS 25.0%
! TTTGATGAGCTTTACATATA+TGG - chr3.3:94135158-94135177 None:intergenic 25.0%
!! AATACTAGTTTAATGATCTG+GGG + chr3.3:94135193-94135212 MS.gene69323:intron 25.0%
!! ACTTTTACATATTGAATTGC+TGG + chr3.3:94135053-94135072 MS.gene69323:intron 25.0%
!! CAATACTAGTTTAATGATCT+GGG + chr3.3:94135192-94135211 MS.gene69323:intron 25.0%
!! TCAACAAACTGGTTATATTT+TGG + chr3.3:94135340-94135359 MS.gene69323:intron 25.0%
!! TCAATACTAGTTTAATGATC+TGG + chr3.3:94135191-94135210 MS.gene69323:intron 25.0%
!! TTATATGCTATTAACTTGGA+TGG - chr3.3:94137013-94137032 None:intergenic 25.0%
!! TTTGAGTTTAAGACTCATTT+GGG + chr3.3:94134322-94134341 MS.gene69323:CDS 25.0%
!! TTTTCTATTGACATGCTAAA+TGG - chr3.3:94136335-94136354 None:intergenic 25.0%
!!! AAAATATAACCAGTTTGTTG+AGG - chr3.3:94135341-94135360 None:intergenic 25.0%
!!! AGAATTGATTTTGACATGTT+TGG + chr3.3:94136857-94136876 MS.gene69323:intron 25.0%
!!! CGATTTTTCAATCAAAGATT+TGG - chr3.3:94137116-94137135 None:intergenic 25.0%
!!! GTTTTAGAACAGTGAATTTA+AGG + chr3.3:94134986-94135005 MS.gene69323:intron 25.0%
!!! TAAATTAGCTCTAACGTTTA+AGG + chr3.3:94136774-94136793 MS.gene69323:intron 25.0%
!!! TCTTTGTTTCAAGTTCTTTT+GGG - chr3.3:94134959-94134978 None:intergenic 25.0%
!!! TTCTTTGTTTCAAGTTCTTT+TGG - chr3.3:94134960-94134979 None:intergenic 25.0%
!!! TTTGCGAGTGTTTTTTAATA+AGG - chr3.3:94138218-94138237 None:intergenic 25.0%
AAACATATAGCAAAACCTCA+TGG + chr3.3:94136628-94136647 MS.gene69323:intron 30.0%
AAAGATGCTGCAAAGAATAT+TGG + chr3.3:94136251-94136270 MS.gene69323:CDS 30.0%
AACAATGTCTAGAAAGTTCT+CGG + chr3.3:94136040-94136059 MS.gene69323:CDS 30.0%
ACCACAAGATGAAAATTCAA+TGG + chr3.3:94134048-94134067 MS.gene69323:CDS 30.0%
AGAAACTCGAAGTAAAAACT+AGG + chr3.3:94137354-94137373 MS.gene69323:intron 30.0%
AGAACTCCTGATAAAATTAC+TGG - chr3.3:94138509-94138528 None:intergenic 30.0%
AGGAGCAATTTAATCATAAG+AGG - chr3.3:94135086-94135105 None:intergenic 30.0%
AGTGGATCAAAGATTTCAAT+AGG + chr3.3:94134434-94134453 MS.gene69323:CDS 30.0%
ATGAGCATATTTGCCTATTT+GGG - chr3.3:94136676-94136695 None:intergenic 30.0%
ATGTAAAGCTCATCAAAAGT+CGG + chr3.3:94135161-94135180 MS.gene69323:intron 30.0%
ATTTGGACGATGATTATGAA+TGG + chr3.3:94138392-94138411 MS.gene69323:CDS 30.0%
CAAGAAAGTCTTACTTTAAG+AGG + chr3.3:94136077-94136096 MS.gene69323:CDS 30.0%
CATTGTCCATGATTATTCAA+AGG + chr3.3:94135847-94135866 MS.gene69323:CDS 30.0%
CGGATTATAGTTAATAATGC+TGG + chr3.3:94134280-94134299 MS.gene69323:CDS 30.0%
CTGAGATACTATAGATACTT+CGG - chr3.3:94135755-94135774 None:intergenic 30.0%
CTTATCATCTAATGAAGTGA+TGG + chr3.3:94135920-94135939 MS.gene69323:CDS 30.0%
CTTGCGAGTTATAACAAATA+AGG + chr3.3:94135881-94135900 MS.gene69323:CDS 30.0%
CTTGCTTAAAGAAGTAATGT+CGG - chr3.3:94135667-94135686 None:intergenic 30.0%
GAGACAGAACAAAATCTTAA+AGG + chr3.3:94136551-94136570 MS.gene69323:intron 30.0%
GGAGCAATTTAATCATAAGA+GGG - chr3.3:94135085-94135104 None:intergenic 30.0%
TACATAGAAAATCATCTCTG+TGG + chr3.3:94135283-94135302 MS.gene69323:intron 30.0%
TTGATTCAGAGTTGAGATTA+GGG - chr3.3:94137864-94137883 None:intergenic 30.0%
TTTGGACGATGATTATGAAT+GGG + chr3.3:94138393-94138412 MS.gene69323:CDS 30.0%
! AACTTTTGTTAGATGGTTGT+TGG + chr3.3:94134089-94134108 MS.gene69323:CDS 30.0%
! AGTGATTTTCACATAGATCT+AGG - chr3.3:94137253-94137272 None:intergenic 30.0%
! ATCCGAGAATTTTGAATAGA+AGG - chr3.3:94137813-94137832 None:intergenic 30.0%
! ATGAGTGAACTTTTGTTAGA+TGG + chr3.3:94134082-94134101 MS.gene69323:CDS 30.0%
! ATTGAATTTTCATCTTGTGG+TGG - chr3.3:94134049-94134068 None:intergenic 30.0%
! GTTTGAGTTTAAGACTCATT+TGG + chr3.3:94134321-94134340 MS.gene69323:CDS 30.0%
! TCAAAGATTGGATTGGAAAA+AGG - chr3.3:94134160-94134179 None:intergenic 30.0%
! TCCATTGAATTTTCATCTTG+TGG - chr3.3:94134052-94134071 None:intergenic 30.0%
!! ATGAGGTTTTGCTATATGTT+TGG - chr3.3:94136629-94136648 None:intergenic 30.0%
!! ATTTTTGTTTGCAAACACCA+AGG + chr3.3:94136307-94136326 MS.gene69323:intron 30.0%
!! GCATAGAGTTTTTGTTTGTT+TGG + chr3.3:94134900-94134919 MS.gene69323:intron 30.0%
!! TTCATCCTTTACGTTTTTAG+CGG - chr3.3:94136978-94136997 None:intergenic 30.0%
!! TTCCTTTTTCACTTGAATCA+AGG + chr3.3:94134533-94134552 MS.gene69323:CDS 30.0%
!!! GTCATTTTTTACAACACACA+AGG + chr3.3:94134924-94134943 MS.gene69323:intron 30.0%
!!! TACAGTTGATTTTTAGCCAT+GGG + chr3.3:94137473-94137492 MS.gene69323:intron 30.0%
AAAATACATCCTGCAGACTA+CGG - chr3.3:94136605-94136624 None:intergenic 35.0%
AAACTCTATGCAAACAAGCA+AGG - chr3.3:94134891-94134910 None:intergenic 35.0%
AACTTGTGATGCAGATTTAG+AGG + chr3.3:94138423-94138442 MS.gene69323:CDS 35.0%
AATTCTTTGGCAACCTAAAC+CGG - chr3.3:94138297-94138316 None:intergenic 35.0%
ACTCCTGATAAAATTACTGG+AGG - chr3.3:94138506-94138525 None:intergenic 35.0%
AGAGAACAGAACTACATGAA+GGG - chr3.3:94136726-94136745 None:intergenic 35.0%
AGATAGAATGCTTGTGTGTA+AGG - chr3.3:94136284-94136303 None:intergenic 35.0%
AGCAAATCCAATATCAGCAA+CGG - chr3.3:94135946-94135965 None:intergenic 35.0%
AGTTTGGGAGTAAATAGAAC+AGG + chr3.3:94136155-94136174 MS.gene69323:CDS 35.0%
ATAGAACAGGAGAGAAAAGA+CGG + chr3.3:94136168-94136187 MS.gene69323:CDS 35.0%
ATGAGACACTTGCATTTGTT+TGG - chr3.3:94137571-94137590 None:intergenic 35.0%
ATGTTTGGGAGTTATTGAAG+TGG + chr3.3:94134795-94134814 MS.gene69323:CDS 35.0%
ATTTCATCATCTAAGTGTGG+TGG - chr3.3:94137217-94137236 None:intergenic 35.0%
CATAACAGAGAAGCTGATAA+GGG + chr3.3:94134405-94134424 MS.gene69323:CDS 35.0%
CATGAGCATATTTGCCTATT+TGG - chr3.3:94136677-94136696 None:intergenic 35.0%
CTATCGTCTCCAAATTTATC+AGG + chr3.3:94137833-94137852 MS.gene69323:CDS 35.0%
CTCCTGATAAAATTACTGGA+GGG - chr3.3:94138505-94138524 None:intergenic 35.0%
CTTGATTCAGAGTTGAGATT+AGG - chr3.3:94137865-94137884 None:intergenic 35.0%
GAAATCTTTGATCCACTTGA+GGG - chr3.3:94134431-94134450 None:intergenic 35.0%
GACCTTGATTCAAGTGAAAA+AGG - chr3.3:94134538-94134557 None:intergenic 35.0%
GATATCTCACAGAGATTTCT+CGG - chr3.3:94134579-94134598 None:intergenic 35.0%
GCCGTTATATGCTATTAACT+TGG - chr3.3:94137017-94137036 None:intergenic 35.0%
GCTCATGTAATAAAACCTCA+TGG + chr3.3:94136690-94136709 MS.gene69323:intron 35.0%
GGTAACAAAGATTCATTGGT+TGG + chr3.3:94138046-94138065 MS.gene69323:CDS 35.0%
GGTAACTTCTTGTCAAGTTT+GGG + chr3.3:94136140-94136159 MS.gene69323:CDS 35.0%
GTCTGGTAACAAAGATTCAT+TGG + chr3.3:94138042-94138061 MS.gene69323:CDS 35.0%
GTGATTTCATCATCTAAGTG+TGG - chr3.3:94137220-94137239 None:intergenic 35.0%
TAATAAGGACTTGCGATACT+CGG - chr3.3:94138203-94138222 None:intergenic 35.0%
TATAGGGGAACGAAACATTA+AGG - chr3.3:94136426-94136445 None:intergenic 35.0%
TCTCAATTTCCTCAACAAAC+TGG + chr3.3:94135329-94135348 MS.gene69323:intron 35.0%
TCTCGGAAGATAAAAAAGGT+TGG + chr3.3:94137716-94137735 MS.gene69323:CDS 35.0%
TCTTCATAACGCCAATTCTT+TGG - chr3.3:94138310-94138329 None:intergenic 35.0%
TGAAATCTTTGATCCACTTG+AGG - chr3.3:94134432-94134451 None:intergenic 35.0%
TGGCTAAAAATCAACTGTAG+AGG - chr3.3:94137472-94137491 None:intergenic 35.0%
TGTAATAAAACCTCATGGTC+TGG + chr3.3:94136695-94136714 MS.gene69323:intron 35.0%
TGTAATTATCATCAGAGTGC+CGG - chr3.3:94135497-94135516 None:intergenic 35.0%
TTAAGACTCATTTGGGTGAA+GGG + chr3.3:94134329-94134348 MS.gene69323:CDS 35.0%
TTACACACACTGTATATCTC+CGG + chr3.3:94135512-94135531 MS.gene69323:CDS 35.0%
TTCAAGTCTTCAGAATGTGA+AGG + chr3.3:94135260-94135279 MS.gene69323:CDS 35.0%
TTCCAGCGAAATATTGTCTA+AGG - chr3.3:94136226-94136245 None:intergenic 35.0%
TTTGTTAGATGGTTGTTGGT+TGG + chr3.3:94134093-94134112 MS.gene69323:CDS 35.0%
! AACCCTCCAGTAATTTTATC+AGG + chr3.3:94138500-94138519 MS.gene69323:CDS 35.0%
! ACTTCGAGTTTCTTCATTGA+GGG - chr3.3:94137347-94137366 None:intergenic 35.0%
! AGATCATTAGCTCTCAGAAT+TGG - chr3.3:94134514-94134533 None:intergenic 35.0%
! ATCAATTTGAAATGACCCAG+AGG - chr3.3:94137789-94137808 None:intergenic 35.0%
! ATGGAGCATCACTTGTTAAT+AGG + chr3.3:94135591-94135610 MS.gene69323:CDS 35.0%
! CATCACTTGTTAATAGGTCA+AGG + chr3.3:94135597-94135616 MS.gene69323:CDS 35.0%
! TACTTCGAGTTTCTTCATTG+AGG - chr3.3:94137348-94137367 None:intergenic 35.0%
! TCTGTACTACAACTCTGAAA+AGG + chr3.3:94137660-94137679 MS.gene69323:CDS 35.0%
! TTTAAGACTCATTTGGGTGA+AGG + chr3.3:94134328-94134347 MS.gene69323:CDS 35.0%
!! TTGCTATGTTGGTGATTCTT+CGG + chr3.3:94135545-94135564 MS.gene69323:CDS 35.0%
!!! ACCTTTTTTATCTTCCGAGA+AGG - chr3.3:94137716-94137735 None:intergenic 35.0%
!!! CAAACTGGTTATATTTTGGC+AGG + chr3.3:94135344-94135363 MS.gene69323:intron 35.0%
!!! CTACAGTTGATTTTTAGCCA+TGG + chr3.3:94137472-94137491 MS.gene69323:intron 35.0%
AAAAACTAGGACCAGCTTGT+TGG + chr3.3:94137367-94137386 MS.gene69323:intron 40.0%
AAATGAACACCGCAAGAAGA+CGG + chr3.3:94137153-94137172 MS.gene69323:intron 40.0%
ACAGAGAGAAAAAGATGACG+AGG + chr3.3:94137286-94137305 MS.gene69323:intron 40.0%
AGAGAGAAAAAGATGACGAG+GGG + chr3.3:94137288-94137307 MS.gene69323:intron 40.0%
AGATTTCTCGGTACTTTGCA+AGG - chr3.3:94134567-94134586 None:intergenic 40.0%
AGGGTGGTTCCTGATAAATT+TGG - chr3.3:94137845-94137864 None:intergenic 40.0%
ATAGATACTTCGGAGTCGAA+TGG - chr3.3:94135745-94135764 None:intergenic 40.0%
ATAGGGATAAGATTCCTGAG+TGG + chr3.3:94134659-94134678 MS.gene69323:CDS 40.0%
ATCTGCAACCAATACCATGA+TGG + chr3.3:94134018-94134037 MS.gene69323:CDS 40.0%
ATCTTGTGCAGGAAATTGCT+AGG + chr3.3:94138329-94138348 MS.gene69323:CDS 40.0%
ATTCAGAGTTGAGATTAGGG+TGG - chr3.3:94137861-94137880 None:intergenic 40.0%
ATTCTTTGGCAACCTAAACC+GGG - chr3.3:94138296-94138315 None:intergenic 40.0%
CAACACCGCTAAAAACGTAA+AGG + chr3.3:94136970-94136989 MS.gene69323:intron 40.0%
CAGAGAACAGAACTACATGA+AGG - chr3.3:94136727-94136746 None:intergenic 40.0%
CAGAGAGAAAAAGATGACGA+GGG + chr3.3:94137287-94137306 MS.gene69323:intron 40.0%
CCATAACAGAGAAGCTGATA+AGG + chr3.3:94134404-94134423 MS.gene69323:CDS 40.0%
CCTTATCAGCTTCTCTGTTA+TGG - chr3.3:94134407-94134426 None:intergenic 40.0%
CGGACAGTTAAGCAACTTAA+AGG + chr3.3:94136578-94136597 MS.gene69323:intron 40.0%
CTAGAAAGTTCTCGGAACAA+AGG + chr3.3:94136048-94136067 MS.gene69323:CDS 40.0%
CTATCATCCCCTCTATTAAC+CGG - chr3.3:94134490-94134509 None:intergenic 40.0%
GAGAATGAAGGGTCAAAGAT+TGG - chr3.3:94134172-94134191 None:intergenic 40.0%
GATGCTGCAAAGAATATTGG+CGG + chr3.3:94136254-94136273 MS.gene69323:CDS 40.0%
GCACACCCTTTGAATAATCA+TGG - chr3.3:94135856-94135875 None:intergenic 40.0%
GCCTATTTGGGAAACATGAA+GGG - chr3.3:94136664-94136683 None:intergenic 40.0%
GCCTTCTCGGAAGATAAAAA+AGG + chr3.3:94137712-94137731 MS.gene69323:CDS 40.0%
GCTTATACAAATATGGGTGC+CGG + chr3.3:94134468-94134487 MS.gene69323:CDS 40.0%
GGGTAACTTCTTGTCAAGTT+TGG + chr3.3:94136139-94136158 MS.gene69323:CDS 40.0%
GTCCTTAGACAATATTTCGC+TGG + chr3.3:94136221-94136240 MS.gene69323:CDS 40.0%
TAAAGTGACCGGAATATCCA+TGG + chr3.3:94137066-94137085 MS.gene69323:intron 40.0%
TAAGACTCATTTGGGTGAAG+GGG + chr3.3:94134330-94134349 MS.gene69323:CDS 40.0%
TAGAACAGGAGAGAAAAGAC+GGG + chr3.3:94136169-94136188 MS.gene69323:CDS 40.0%
TATAGCAAAACCTCATGGTC+TGG + chr3.3:94136633-94136652 MS.gene69323:intron 40.0%
TCACTGTCATTGCAATCTAC+AGG - chr3.3:94135804-94135823 None:intergenic 40.0%
TCCCTTCATGTTTCCCAAAT+AGG + chr3.3:94136660-94136679 MS.gene69323:intron 40.0%
TCTCAGAACCTCTTGAATCT+CGG - chr3.3:94135400-94135419 None:intergenic 40.0%
TCTTAAACTCAAACTGCTGC+AGG - chr3.3:94134315-94134334 None:intergenic 40.0%
TCTTTGACCCTTCATTCTCT+TGG + chr3.3:94134173-94134192 MS.gene69323:CDS 40.0%
TGAAGGGTCAAAGATTGGAT+TGG - chr3.3:94134167-94134186 None:intergenic 40.0%
TGACAAGAAGTTACCCTCAA+CGG - chr3.3:94136135-94136154 None:intergenic 40.0%
TGACATGCTAAATGGTACCT+TGG - chr3.3:94136327-94136346 None:intergenic 40.0%
TGATGTACACGGAACATTAG+CGG + chr3.3:94134744-94134763 MS.gene69323:CDS 40.0%
TGCAAACAGTCTCAAGTTCA+CGG - chr3.3:94134849-94134868 None:intergenic 40.0%
TGCCTATTTGGGAAACATGA+AGG - chr3.3:94136665-94136684 None:intergenic 40.0%
TGCTGCAGATGTAATTCAGT+CGG + chr3.3:94135962-94135981 MS.gene69323:CDS 40.0%
TTATCCCTATAAACTCGACC+AGG - chr3.3:94134649-94134668 None:intergenic 40.0%
TTGTTATAACTCGCAAGCTG+CGG - chr3.3:94135878-94135897 None:intergenic 40.0%
TTTGCCTGGTCGAGTTTATA+GGG + chr3.3:94134642-94134661 MS.gene69323:CDS 40.0%
! ACTTCAACTCGTCATTGACT+CGG + chr3.3:94137754-94137773 MS.gene69323:CDS 40.0%
! AGTGATAGTTTTCTCTGCCT+TGG - chr3.3:94136195-94136214 None:intergenic 40.0%
! ATATCAGTTTTCTGCAGAGG+TGG + chr3.3:94134594-94134613 MS.gene69323:CDS 40.0%
! CTTCGAGTTTCTTCATTGAG+GGG - chr3.3:94137346-94137365 None:intergenic 40.0%
! GAGATATCAGTTTTCTGCAG+AGG + chr3.3:94134591-94134610 MS.gene69323:CDS 40.0%
! TGGTTCTGCAGTGACAAAAA+TGG - chr3.3:94137551-94137570 None:intergenic 40.0%
! TTAAGAGGAGATGTTGACTG+TGG + chr3.3:94136092-94136111 MS.gene69323:CDS 40.0%
! TTTGATTTCCCGTCTTCTTG+CGG - chr3.3:94137165-94137184 None:intergenic 40.0%
!! GGTTTAGGTTGCCAAAGAAT+TGG + chr3.3:94138296-94138315 MS.gene69323:CDS 40.0%
!! TTAATAGGTCAAGGTGTTGC+CGG + chr3.3:94135606-94135625 MS.gene69323:CDS 40.0%
!!! GTTTTTTCATGAGGCTTGCA+TGG + chr3.3:94135572-94135591 MS.gene69323:CDS 40.0%
!!! TTCGGTCAGGTTTTTTCATG+AGG + chr3.3:94135563-94135582 MS.gene69323:CDS 40.0%
AAAAGGATCTGCAGGCAACA+CGG + chr3.3:94137677-94137696 MS.gene69323:CDS 45.0%
AAGAAGTTACCCTCAACGGA+AGG - chr3.3:94136131-94136150 None:intergenic 45.0%
AATGAACACCGCAAGAAGAC+GGG + chr3.3:94137154-94137173 MS.gene69323:intron 45.0%
ACAACACAGCAGAGCAACTA+TGG + chr3.3:94134823-94134842 MS.gene69323:CDS 45.0%
ACATAGCAAGCATACTCCAC+CGG - chr3.3:94135534-94135553 None:intergenic 45.0%
CACACAAACAATGTTGCGTC+TGG + chr3.3:94138025-94138044 MS.gene69323:CDS 45.0%
CACCTGATGTTCGATTCTTC+AGG + chr3.3:94134683-94134702 MS.gene69323:CDS 45.0%
CAGACGCAACATTGTTTGTG+TGG - chr3.3:94138027-94138046 None:intergenic 45.0%
CATGTACTGAACAGGAAAGC+CGG + chr3.3:94134260-94134279 MS.gene69323:CDS 45.0%
CATTTGGAGACGAGAAAACC+CGG + chr3.3:94138275-94138294 MS.gene69323:CDS 45.0%
CGGTTAATAGAGGGGATGAT+AGG + chr3.3:94134488-94134507 MS.gene69323:CDS 45.0%
CTCAGAACCTCTTGAATCTC+GGG - chr3.3:94135399-94135418 None:intergenic 45.0%
CTCCTGAAGAATCGAACATC+AGG - chr3.3:94134688-94134707 None:intergenic 45.0%
CTTTCCTGTTCAGTACATGG+AGG - chr3.3:94134259-94134278 None:intergenic 45.0%
GAAAGTTCTCGGAACAAAGG+CGG + chr3.3:94136051-94136070 MS.gene69323:CDS 45.0%
GAGAGAAAAAGATGACGAGG+GGG + chr3.3:94137289-94137308 MS.gene69323:intron 45.0%
GCGTTATGAAGATCTTGTGC+AGG + chr3.3:94138318-94138337 MS.gene69323:CDS 45.0%
GGAAGTCAGACTACATGAAG+AGG - chr3.3:94137963-94137982 None:intergenic 45.0%
GGCTGTATGCTTAATGAGAC+TGG - chr3.3:94137896-94137915 None:intergenic 45.0%
GGGTTGCAGACAAAGTTTGA+TGG - chr3.3:94138485-94138504 None:intergenic 45.0%
GTACATCACACTCTTGAGCA+TGG - chr3.3:94134732-94134751 None:intergenic 45.0%
GTCAGACTACATGAAGAGGA+AGG - chr3.3:94137959-94137978 None:intergenic 45.0%
GTGATTTCGATGCACCTTCA+GGG - chr3.3:94137937-94137956 None:intergenic 45.0%
GTTTGCCTGGTCGAGTTTAT+AGG + chr3.3:94134641-94134660 MS.gene69323:CDS 45.0%
TCACAAAGCCAGGAAACACT+TGG + chr3.3:94138163-94138182 MS.gene69323:CDS 45.0%
TCTCATCATGCCAGGTTGTT+TGG + chr3.3:94135702-94135721 MS.gene69323:CDS 45.0%
TCTGTTATGGAAGATCCACC+AGG - chr3.3:94134394-94134413 None:intergenic 45.0%
TGCATCCAACAGGGAAAAGA+TGG + chr3.3:94135468-94135487 MS.gene69323:CDS 45.0%
TGGAGCTTCCATCATGGTAT+TGG - chr3.3:94134029-94134048 None:intergenic 45.0%
! AATTGCCTTTAGCTCAGACG+TGG + chr3.3:94135439-94135458 MS.gene69323:CDS 45.0%
! ACTTGCGATACTCGGTTTTC+GGG - chr3.3:94138195-94138214 None:intergenic 45.0%
! AGGAGATGTTGACTGTGGTA+GGG + chr3.3:94136097-94136116 MS.gene69323:CDS 45.0%
! ATTGCCTTTAGCTCAGACGT+GGG + chr3.3:94135440-94135459 MS.gene69323:CDS 45.0%
! ATTTGGGTGAAGGGGTTAGT+AGG + chr3.3:94134338-94134357 MS.gene69323:CDS 45.0%
! CAACTCTGAAAAGGATCTGC+AGG + chr3.3:94137669-94137688 MS.gene69323:CDS 45.0%
! CTTCATTGAGGGGTGGTTTT+GGG - chr3.3:94137336-94137355 None:intergenic 45.0%
! GACGAGTTGAAGTTTCTGCA+AGG - chr3.3:94137747-94137766 None:intergenic 45.0%
! GACTTGCGATACTCGGTTTT+CGG - chr3.3:94138196-94138215 None:intergenic 45.0%
! GCTCAAGAGTGTGATGTACA+CGG + chr3.3:94134733-94134752 MS.gene69323:CDS 45.0%
! GTAATGTCGGTTGAGAAGCA+CGG - chr3.3:94135654-94135673 None:intergenic 45.0%
! TCTTCATTGAGGGGTGGTTT+TGG - chr3.3:94137337-94137356 None:intergenic 45.0%
! TTGTTGTTCGTCGTCTTGTG+CGG - chr3.3:94137193-94137212 None:intergenic 45.0%
!! ATATGGGTGCCGGTTAATAG+AGG + chr3.3:94134478-94134497 MS.gene69323:CDS 45.0%
!! ATGTTGGTGATTCTTCGGTC+AGG + chr3.3:94135550-94135569 MS.gene69323:CDS 45.0%
!! GGGGAAAGTTGTTAACTTGC+AGG + chr3.3:94135212-94135231 MS.gene69323:intron 45.0%
!! GTATTAAGCGTTGGCCTTCT+CGG + chr3.3:94137699-94137718 MS.gene69323:CDS 45.0%
!! GTGGAGTATGCTTGCTATGT+TGG + chr3.3:94135534-94135553 MS.gene69323:CDS 45.0%
!! GTTTCCTGGCTTTGTGATCT+TGG - chr3.3:94138160-94138179 None:intergenic 45.0%
!! GTTTGTCATAAAAGCACCCC+CGG - chr3.3:94135628-94135647 None:intergenic 45.0%
!! TAATAGGTCAAGGTGTTGCC+GGG + chr3.3:94135607-94135626 MS.gene69323:CDS 45.0%
!! TATGGGTGCCGGTTAATAGA+GGG + chr3.3:94134479-94134498 MS.gene69323:CDS 45.0%
!!! ATAATCAATTTTTTTTTTTT+TGG - chr3.3:94136800-94136819 None:intergenic 5.0%
AACAGGGAAAAGATGGCTGC+CGG + chr3.3:94135475-94135494 MS.gene69323:CDS 50.0%
AACCTGGCATGATGAGACAG+TGG - chr3.3:94135699-94135718 None:intergenic 50.0%
AAGGCAGGCCAAGAGAATGA+AGG - chr3.3:94134184-94134203 None:intergenic 50.0%
AAGGGATACTCCAGACCATG+AGG - chr3.3:94136708-94136727 None:intergenic 50.0%
ACAAGGGAGCAGGACATGTT+TGG + chr3.3:94134780-94134799 MS.gene69323:CDS 50.0%
ACACGGAACATTAGCGGTTC+CGG + chr3.3:94134750-94134769 MS.gene69323:CDS 50.0%
ACCGGAATATCCATGGTCTC+CGG + chr3.3:94137073-94137092 MS.gene69323:intron 50.0%
ACCTTCAGGGCTCAACGAAT+CGG - chr3.3:94137924-94137943 None:intergenic 50.0%
AGACAGCCATCCTCTTGTGT+TGG - chr3.3:94135992-94136011 None:intergenic 50.0%
AGCAACCCGGCAATGATGTT+CGG + chr3.3:94134215-94134234 MS.gene69323:CDS 50.0%
AGCTCGCAATCCAAACAACC+TGG - chr3.3:94135715-94135734 None:intergenic 50.0%
AGGATGGCTGTCTCATTGGA+TGG + chr3.3:94135999-94136018 MS.gene69323:CDS 50.0%
AGGCAGGCCAAGAGAATGAA+GGG - chr3.3:94134183-94134202 None:intergenic 50.0%
AGTCGGAACTCCAACACAAG+AGG + chr3.3:94135979-94135998 MS.gene69323:CDS 50.0%
ATCCACTGTCTCATCATGCC+AGG + chr3.3:94135694-94135713 MS.gene69323:CDS 50.0%
ATTCCACCAACGCCTAATCC+AGG + chr3.3:94134367-94134386 MS.gene69323:CDS 50.0%
CAAGAGGATGGCTGTCTCAT+TGG + chr3.3:94135995-94136014 MS.gene69323:CDS 50.0%
CAAGGGAGCAGGACATGTTT+GGG + chr3.3:94134781-94134800 MS.gene69323:CDS 50.0%
CACACACTGTATATCTCCGG+TGG + chr3.3:94135515-94135534 MS.gene69323:CDS 50.0%
CATGCCAAGATCACAAAGCC+AGG + chr3.3:94138153-94138172 MS.gene69323:CDS 50.0%
CGAGTTTCTTCATTGAGGGG+TGG - chr3.3:94137343-94137362 None:intergenic 50.0%
CGGCTTTCCTGTTCAGTACA+TGG - chr3.3:94134262-94134281 None:intergenic 50.0%
CGGTTCCGGTGTTTGAACAA+GGG + chr3.3:94134764-94134783 MS.gene69323:CDS 50.0%
CTCTTGAATCTCGGGTAGTG+CGG - chr3.3:94135391-94135410 None:intergenic 50.0%
CTGCTCCCTTGTTCAAACAC+CGG - chr3.3:94134772-94134791 None:intergenic 50.0%
CTTAAAGGACCGTAGTCTGC+AGG + chr3.3:94136593-94136612 MS.gene69323:intron 50.0%
GAGACGAGAAAACCCGGTTT+AGG + chr3.3:94138281-94138300 MS.gene69323:CDS 50.0%
GAGTGTTCTCCTTCCGTTGA+GGG + chr3.3:94136119-94136138 MS.gene69323:CDS 50.0%
GGAACTCCAACACAAGAGGA+TGG + chr3.3:94135983-94136002 MS.gene69323:CDS 50.0%
GGCAACACGGTATTAAGCGT+TGG + chr3.3:94137690-94137709 MS.gene69323:CDS 50.0%
GGTGATTTCGATGCACCTTC+AGG - chr3.3:94137938-94137957 None:intergenic 50.0%
GGTGTTCACCAAGTGTTTCC+TGG - chr3.3:94138174-94138193 None:intergenic 50.0%
GTGATGGCCGTTGCTGATAT+TGG + chr3.3:94135936-94135955 MS.gene69323:CDS 50.0%
GTTGTTGATCTCAGCAGCTC+TGG + chr3.3:94135234-94135253 MS.gene69323:CDS 50.0%
TCCGGAGACCATGGATATTC+CGG - chr3.3:94137077-94137096 None:intergenic 50.0%
TCTTGAGCATGGTCAACTCG+TGG - chr3.3:94134721-94134740 None:intergenic 50.0%
TGCTCCTCCATGTACTGAAC+AGG + chr3.3:94134252-94134271 MS.gene69323:CDS 50.0%
TGGGTCTCTTGCATCCAACA+GGG + chr3.3:94135459-94135478 MS.gene69323:CDS 50.0%
TGGTTGGAAGCTTCTGCTGA+TGG + chr3.3:94134109-94134128 MS.gene69323:CDS 50.0%
TTCATTCTCTTGGCCTGCCT+TGG + chr3.3:94134183-94134202 MS.gene69323:CDS 50.0%
TTGGAGAACAACGAGCAACC+CGG + chr3.3:94134202-94134221 MS.gene69323:CDS 50.0%
! CACTCGCAAAGCGTCTCAAA+AGG + chr3.3:94138228-94138247 MS.gene69323:CDS 50.0%
! GACTGTTTGCAAAGCGCTAG+AGG + chr3.3:94134858-94134877 MS.gene69323:CDS 50.0%
! GAGGAGATGTTGACTGTGGT+AGG + chr3.3:94136096-94136115 MS.gene69323:CDS 50.0%
! GTGAAGGGGTTAGTAGGTTG+TGG + chr3.3:94134344-94134363 MS.gene69323:CDS 50.0%
! GTGTTGTTGCTCTGACAAGC+TGG - chr3.3:94138005-94138024 None:intergenic 50.0%
! TCAGTTTTCTGCAGAGGTGG+AGG + chr3.3:94134597-94134616 MS.gene69323:CDS 50.0%
! TCGCAAAGCGTCTCAAAAGG+AGG + chr3.3:94138231-94138250 MS.gene69323:CDS 50.0%
! TTGTGGTGGAGCTTCCATCA+TGG - chr3.3:94134035-94134054 None:intergenic 50.0%
!! AATAGGTCAAGGTGTTGCCG+GGG + chr3.3:94135608-94135627 MS.gene69323:CDS 50.0%
!! ATGGGTGCCGGTTAATAGAG+GGG + chr3.3:94134480-94134499 MS.gene69323:CDS 50.0%
!! CTCGTCATTGACTCGGTTCA+AGG + chr3.3:94137761-94137780 MS.gene69323:CDS 50.0%
!! TAGGACCAGCTTGTTGGAGA+GGG + chr3.3:94137373-94137392 MS.gene69323:intron 50.0%
AAGGGACATGCCAGACCATG+AGG - chr3.3:94136646-94136665 None:intergenic 55.0%
AGCTGATAAGGGCCCTCAAG+TGG + chr3.3:94134416-94134435 MS.gene69323:CDS 55.0%
AGGAGAGAAAAGACGGGCCA+AGG + chr3.3:94136175-94136194 MS.gene69323:CDS 55.0%
ATGGAAGATCCACCAGGTCC+TGG - chr3.3:94134388-94134407 None:intergenic 55.0%
CCTTCAGGGCTCAACGAATC+GGG - chr3.3:94137923-94137942 None:intergenic 55.0%
CGAACATCAGGTGTCCACTC+AGG - chr3.3:94134676-94134695 None:intergenic 55.0%
CGCACTACCCGAGATTCAAG+AGG + chr3.3:94135389-94135408 MS.gene69323:CDS 55.0%
CGGTGTTTGAACAAGGGAGC+AGG + chr3.3:94134770-94134789 MS.gene69323:CDS 55.0%
CTCGGGTAGTGCGGTTTCAT+AGG - chr3.3:94135382-94135401 None:intergenic 55.0%
CTCGTGCCGAACATCATTGC+CGG - chr3.3:94134224-94134243 None:intergenic 55.0%
GAGACCCACGTCTGAGCTAA+AGG - chr3.3:94135447-94135466 None:intergenic 55.0%
GATCCACCAGGTCCTGGATT+AGG - chr3.3:94134382-94134401 None:intergenic 55.0%
GATGACGAGGGGGTGATTTC+AGG + chr3.3:94137299-94137318 MS.gene69323:intron 55.0%
GCGGTTCCGGTGTTTGAACA+AGG + chr3.3:94134763-94134782 MS.gene69323:CDS 55.0%
GGAGGACTCAAAGGAGTTGG+TGG + chr3.3:94134615-94134634 MS.gene69323:CDS 55.0%
GGGTTGCTCGTTGTTCTCCA+AGG - chr3.3:94134203-94134222 None:intergenic 55.0%
GGTGGAGGACTCAAAGGAGT+TGG + chr3.3:94134612-94134631 MS.gene69323:CDS 55.0%
GTGGGTCTCTTGCATCCAAC+AGG + chr3.3:94135458-94135477 MS.gene69323:CDS 55.0%
TCGTGCCGAACATCATTGCC+GGG - chr3.3:94134223-94134242 None:intergenic 55.0%
TGCAGAGGTGGAGGACTCAA+AGG + chr3.3:94134606-94134625 MS.gene69323:CDS 55.0%
TGCTCGTTGTTCTCCAAGGC+AGG - chr3.3:94134199-94134218 None:intergenic 55.0%
! ACTCGGTTCAAGGTGCCTCT+GGG + chr3.3:94137771-94137790 MS.gene69323:CDS 55.0%
! GGAGTGTTCTCCTTCCGTTG+AGG + chr3.3:94136118-94136137 MS.gene69323:CDS 55.0%
! GGCAGCCATCTTTTCCCTGT+TGG - chr3.3:94135476-94135495 None:intergenic 55.0%
! TGTCGGTTGAGAAGCACGGT+TGG - chr3.3:94135650-94135669 None:intergenic 55.0%
!! ACCAGCTTGTTGGAGAGGGA+GGG + chr3.3:94137377-94137396 MS.gene69323:intron 55.0%
!! ATAGGTCAAGGTGTTGCCGG+GGG + chr3.3:94135609-94135628 MS.gene69323:CDS 55.0%
!! CTAGGACCAGCTTGTTGGAG+AGG + chr3.3:94137372-94137391 MS.gene69323:intron 55.0%
!! GACTCAAAGGAGTTGGTGGC+GGG + chr3.3:94134619-94134638 MS.gene69323:CDS 55.0%
!! GGACTCAAAGGAGTTGGTGG+CGG + chr3.3:94134618-94134637 MS.gene69323:CDS 55.0%
ACGCCTAATCCAGGACCTGG+TGG + chr3.3:94134376-94134395 MS.gene69323:CDS 60.0%
CCAACGCCTAATCCAGGACC+TGG + chr3.3:94134373-94134392 MS.gene69323:CDS 60.0%
CGTTGCAGATCCGGAGACCA+TGG - chr3.3:94137086-94137105 None:intergenic 60.0%
GGGCGTCAACGTTGCAGATC+CGG - chr3.3:94137095-94137114 None:intergenic 60.0%
GGGCTCAACGAATCGGGATC+TGG - chr3.3:94137917-94137936 None:intergenic 60.0%
! CCAGGTCCTGGATTAGGCGT+TGG - chr3.3:94134376-94134395 None:intergenic 60.0%
! CCCGATTCGTTGAGCCCTGA+AGG + chr3.3:94137920-94137939 MS.gene69323:CDS 60.0%
! GACTCGGTTCAAGGTGCCTC+TGG + chr3.3:94137770-94137789 MS.gene69323:CDS 60.0%
!! CCAGCTTGTTGGAGAGGGAG+GGG + chr3.3:94137378-94137397 MS.gene69323:intron 60.0%
!! GACCAGCTTGTTGGAGAGGG+AGG + chr3.3:94137376-94137395 MS.gene69323:intron 60.0%
!! GGTCCTGGATTAGGCGTTGG+TGG - chr3.3:94134373-94134392 None:intergenic 60.0%
CCCCTCCCTCTCCAACAAGC+TGG - chr3.3:94137381-94137400 None:intergenic 65.0%
!! GAGTTGGTGGCGGGTTTGCC+TGG + chr3.3:94134628-94134647 MS.gene69323:CDS 65.0%


Chromosome Type Strat End Strand Name
chr3.3 gene 94133992 94138543 94133992 ID=MS.gene69323
chr3.3 mRNA 94133992 94138543 94133992 ID=MS.gene69323.t1;Parent=MS.gene69323
chr3.3 exon 94133992 94134879 94133992 ID=MS.gene69323.t1.exon1;Parent=MS.gene69323.t1
chr3.3 CDS 94133992 94134879 94133992 ID=cds.MS.gene69323.t1;Parent=MS.gene69323.t1
chr3.3 exon 94135234 94135281 94135234 ID=MS.gene69323.t1.exon2;Parent=MS.gene69323.t1
chr3.3 CDS 94135234 94135281 94135234 ID=cds.MS.gene69323.t1;Parent=MS.gene69323.t1
chr3.3 exon 94135366 94136275 94135366 ID=MS.gene69323.t1.exon3;Parent=MS.gene69323.t1
chr3.3 CDS 94135366 94136275 94135366 ID=cds.MS.gene69323.t1;Parent=MS.gene69323.t1
chr3.3 exon 94137660 94138543 94137660 ID=MS.gene69323.t1.exon4;Parent=MS.gene69323.t1
chr3.3 CDS 94137660 94138543 94137660 ID=cds.MS.gene69323.t1;Parent=MS.gene69323.t1
Gene Sequence

>MS.gene69323

ATGGGAGATGGTGCTGCAGTGACATCATCTGCAACCAATACCATGATGGAAGCTCCACCACAAGATGAAAATTCAATGGATTTTGATTACATGAGTGAACTTTTGTTAGATGGTTGTTGGTTGGAAGCTTCTGCTGATGGATCTGAGTTCTTGCTGCAAAGTTCTCCTTTTTCCAATCCAATCTTTGACCCTTCATTCTCTTGGCCTGCCTTGGAGAACAACGAGCAACCCGGCAATGATGTTCGGCACGAGTCTCAAGATGCTCCTCCATGTACTGAACAGGAAAGCCGGATTATAGTTAATAATGCTGGTAGTAGCGACCTGCAGCAGTTTGAGTTTAAGACTCATTTGGGTGAAGGGGTTAGTAGGTTGTGGATTCCACCAACGCCTAATCCAGGACCTGGTGGATCTTCCATAACAGAGAAGCTGATAAGGGCCCTCAAGTGGATCAAAGATTTCAATAGGAACAAAGATATGCTTATACAAATATGGGTGCCGGTTAATAGAGGGGATGATAGGCCAATTCTGAGAGCTAATGATCTTCCTTTTTCACTTGAATCAAGGTCTTTAAACCTTGCAAAGTACCGAGAAATCTCTGTGAGATATCAGTTTTCTGCAGAGGTGGAGGACTCAAAGGAGTTGGTGGCGGGTTTGCCTGGTCGAGTTTATAGGGATAAGATTCCTGAGTGGACACCTGATGTTCGATTCTTCAGGAGTGATGAGTATCCACGAGTTGACCATGCTCAAGAGTGTGATGTACACGGAACATTAGCGGTTCCGGTGTTTGAACAAGGGAGCAGGACATGTTTGGGAGTTATTGAAGTGGTGATGACAACACAGCAGAGCAACTATGGCCGTGAACTTGAGACTGTTTGCAAAGCGCTAGAGGTTTTTCTCCTTGCTTGTTTGCATAGAGTTTTTGTTTGTTTGGTGTCATTTTTTACAACACACAAGGATTATGTAACCCAAAAGAACTTGAAACAAAGAACTTATGGTTTTAGAACAGTGAATTTAAGGGTGCAGTCAACTTGCTATTTGTTGTTTCTAAAGAGATAAACTGCACTTTTACATATTGAATTGCTGGTTCTTTCCCTCTTATGATTAAATTGCTCCTTGTTACACATTTCAATATAAATGCTTATGGCGACAAATGTTTTAACATGCCATATATGTAAAGCTCATCAAAAGTCGGAACTTCATCAATACTAGTTTAATGATCTGGGGAAAGTTGTTAACTTGCAGGTTGTTGATCTCAGCAGCTCTGGACATTCAAGTCTTCAGAATGTGAAGGTACATAGAAAATCATCTCTGTGGAAGATTTTACGAACTCATTAAATTCTCAATTTCCTCAACAAACTGGTTATATTTTGGCAGGCTTGCGACAAGTCCTATGAAACCGCACTACCCGAGATTCAAGAGGTTCTGAGATCTGCATGTGAAATGCACAAATTGCCTTTAGCTCAGACGTGGGTCTCTTGCATCCAACAGGGAAAAGATGGCTGCCGGCACTCTGATGATAATTACACACACTGTATATCTCCGGTGGAGTATGCTTGCTATGTTGGTGATTCTTCGGTCAGGTTTTTTCATGAGGCTTGCATGGAGCATCACTTGTTAATAGGTCAAGGTGTTGCCGGGGGTGCTTTTATGACAAACCAACCGTGCTTCTCAACCGACATTACTTCTTTAAGCAAGACAGACTATCCACTGTCTCATCATGCCAGGTTGTTTGGATTGCGAGCTGCAGTTGCCATTCGACTCCGAAGTATCTATAGTATCTCAGACGACTATGTTCTTGAGTTTTTCTTGCCTGTAGATTGCAATGACAGTGAAGAACAGAAAAAGATGCTCACATCATTGTCCATGATTATTCAAAGGGTGTGCCGCAGCTTGCGAGTTATAACAAATAAGGAATTGGAGAAAAATAACTTATCATCTAATGAAGTGATGGCCGTTGCTGATATTGGATTTGCTGCAGATGTAATTCAGTCGGAACTCCAACACAAGAGGATGGCTGTCTCATTGGATGGCGAAGAAAAGTTTAATGAAACAATGTCTAGAAAGTTCTCGGAACAAAGGCGGCAACAAGAAAGTCTTACTTTAAGAGGAGATGTTGACTGTGGTAGGGAGTGTTCTCCTTCCGTTGAGGGTAACTTCTTGTCAAGTTTGGGAGTAAATAGAACAGGAGAGAAAAGACGGGCCAAGGCAGAGAAAACTATCACTCTTCAAGTCCTTAGACAATATTTCGCTGGAAGTCTAAAAGATGCTGCAAAGAATATTGGCGGTAAGCCTTACACACAAGCATTCTATCTTAGATTTTTGTTTGCAAACACCAAGGTACCATTTAGCATGTCAATAGAAAAAACAAAATGAAAGATTTTGTTATATTCTCCTATGTTCTACTCATCAATTTTTTTTTTTTTTTTTTTTACCTTAATGTTTCGTTCCCCTATATTATTTTTTTGTACTGAACATATAGGCAAAATACATCATATTGTCATTTAAGTTGTTCAATTGTACCAAATTAAGTTTTACATAATGTGACTTAAAGGACTCATTGAGACAGAACAAAATCTTAAAGGACTACGGACAGTTAAGCAACTTAAAGGACCGTAGTCTGCAGGATGTATTTTGCCAAACATATAGCAAAACCTCATGGTCTGGCATGTCCCTTCATGTTTCCCAAATAGGCAAATATGCTCATGTAATAAAACCTCATGGTCTGGAGTATCCCTTCATGTAGTTCTGTTCTCTGACATAATACAATTTTCATGTAAGTAATTAAATTAGCTCTAACGTTTAAGGCCAAAAAAAAAAAAATTGATTATATTCATTTTTGTCAAGCAAAATTGATTTTAGATATGTAGAATTGATTTTGACATGTTTGGATGTTATTGAGTAGAATTGATTCTAACTTTTTTTTTTTTTGACAAAAACAAATTGATATTCATTCATTCAAATCGAGAAATTACATCATTCAACACCGCTAAAAACGTAAAGGATGAATCTGCAAACAAACCATCCAAGTTAATAGCATATAACGGCATAATGCCTACAAAAATATATGATAAAATTAAAGTGACCGGAATATCCATGGTCTCCGGATCTGCAACGTTGACGCCCAAATCTTTGATTGAAAAATCGATCTTTCAAGATGAATAAAATGAACACCGCAAGAAGACGGGAAATCAAACAGCGCCGCACAAGACGACGAACAACAAACCACCACACTTAGATGATGAAATCACAATGAAAAAACCTAGATCTATGTGAAAATCACTTATTTAGATTGAAACAGAGAGAAAAAGATGACGAGGGGGTGATTTCAGGTCAAAAATTGACCCAAAACCACCCCTCAATGAAGAAACTCGAAGTAAAAACTAGGACCAGCTTGTTGGAGAGGGAGGGGAAGAGTGAGAGAGAAAATGAAGTGTTGTTTAATTGATTCTAACTTGAAATTAGAATTTGGAGCTTTTGCCTCTACAGTTGATTTTTAGCCATGGGTTTATTGTTTTACATTTAATTCACTTTTAGGCATACTCAATTCATTTAAAATCCATTTTTGTCACTGCAGAACCAAACAAATGCAAGTGTCTCATTTCTTAGTTTATTTGTAACGTCTATTCGAAGTCTTTCATTAATACCATCTGTTGAATTGAATTTTTCAGTCTGTACTACAACTCTGAAAAGGATCTGCAGGCAACACGGTATTAAGCGTTGGCCTTCTCGGAAGATAAAAAAGGTTGGTCACTCCTTGCAGAAACTTCAACTCGTCATTGACTCGGTTCAAGGTGCCTCTGGGTCATTTCAAATTGATTCCTTCTATTCAAAATTCTCGGATCTATCGTCTCCAAATTTATCAGGAACCACCCTAATCTCAACTCTGAATCAAGTTGATAATCCAGTCTCATTAAGCATACAGCCAGATCCCGATTCGTTGAGCCCTGAAGGTGCATCGAAATCACCTTCCTCTTCATGTAGTCTGACTTCCTATTCAAGCCATTCATGTTCCAGCTTGTCAGAGCAACAACACCACACAAACAATGTTGCGTCTGGTAACAAAGATTCATTGGTTGGTGAAGATTCTGTCGATGTTGTGTTGAAGAGAATCAGAAGTGAAGCAGAACTTAAAAGCCTGATTCAAGATAATAAATCAAAACTCATGCCAAGATCACAAAGCCAGGAAACACTTGGTGAACACCCGAAAACCGAGTATCGCAAGTCCTTATTAAAAAACACTCGCAAAGCGTCTCAAAAGGAGGATGCTCATAGAGTAAAAGTTACATTTGGAGACGAGAAAACCCGGTTTAGGTTGCCAAAGAATTGGCGTTATGAAGATCTTGTGCAGGAAATTGCTAGGAGATTTAATGTAAGTGAAATGAGCAAATTCGATATCAAATATTTGGACGATGATTATGAATGGGTATTACTAACTTGTGATGCAGATTTAGAGGAGTGCATTGATGTTTCTCAATCTTCTGAGAATAGTACCATCAAACTTTGTCTGCAACCCTCCAGTAATTTTATCAGGAGTTCTTTAGAATTTAGATAG
Protein sequence

>MS.gene69323.t1

MGDGAAVTSSATNTMMEAPPQDENSMDFDYMSELLLDGCWLEASADGSEFLLQSSPFSNPIFDPSFSWPALENNEQPGNDVRHESQDAPPCTEQESRIIVNNAGSSDLQQFEFKTHLGEGVSRLWIPPTPNPGPGGSSITEKLIRALKWIKDFNRNKDMLIQIWVPVNRGDDRPILRANDLPFSLESRSLNLAKYREISVRYQFSAEVEDSKELVAGLPGRVYRDKIPEWTPDVRFFRSDEYPRVDHAQECDVHGTLAVPVFEQGSRTCLGVIEVVMTTQQSNYGRELETVCKALEVVDLSSSGHSSLQNVKACDKSYETALPEIQEVLRSACEMHKLPLAQTWVSCIQQGKDGCRHSDDNYTHCISPVEYACYVGDSSVRFFHEACMEHHLLIGQGVAGGAFMTNQPCFSTDITSLSKTDYPLSHHARLFGLRAAVAIRLRSIYSISDDYVLEFFLPVDCNDSEEQKKMLTSLSMIIQRVCRSLRVITNKELEKNNLSSNEVMAVADIGFAADVIQSELQHKRMAVSLDGEEKFNETMSRKFSEQRRQQESLTLRGDVDCGRECSPSVEGNFLSSLGVNRTGEKRRAKAEKTITLQVLRQYFAGSLKDAAKNIGVCTTTLKRICRQHGIKRWPSRKIKKVGHSLQKLQLVIDSVQGASGSFQIDSFYSKFSDLSSPNLSGTTLISTLNQVDNPVSLSIQPDPDSLSPEGASKSPSSSCSLTSYSSHSCSSLSEQQHHTNNVASGNKDSLVGEDSVDVVLKRIRSEAELKSLIQDNKSKLMPRSQSQETLGEHPKTEYRKSLLKNTRKASQKEDAHRVKVTFGDEKTRFRLPKNWRYEDLVQEIARRFNVSEMSKFDIKYLDDDYEWVLLTCDADLEECIDVSQSSENSTIKLCLQPSSNFIRSSLEFR