Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070123.t1 | XP_003612662.1 | 98.4 | 799 | 13 | 0 | 1 | 799 | 1 | 799 | 0.00E+00 | 1466.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070123.t1 | Q9FVQ5 | 77.3 | 722 | 163 | 1 | 1 | 721 | 1 | 722 | 0.0e+00 | 1129.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070123.t1 | G7K880 | 98.4 | 799 | 13 | 0 | 1 | 799 | 1 | 799 | 0.0e+00 | 1466.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene070123 | MS.gene52745 | PPI |
| MS.gene070123 | MS.gene016796 | PPI |
| MS.gene070123 | MS.gene018069 | PPI |
| MS.gene070123 | MS.gene81560 | PPI |
| MS.gene070123 | MS.gene04704 | PPI |
| MS.gene070123 | MS.gene39866 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070123.t1 | MTR_5g027510 | 98.373 | 799 | 13 | 0 | 1 | 799 | 1 | 799 | 0.0 | 1619 |
| MS.gene070123.t1 | MTR_5g086610 | 59.025 | 759 | 303 | 2 | 1 | 759 | 1 | 751 | 0.0 | 954 |
| MS.gene070123.t1 | MTR_7g094570 | 59.452 | 730 | 295 | 1 | 1 | 729 | 1 | 730 | 0.0 | 914 |
| MS.gene070123.t1 | MTR_4g132570 | 55.110 | 773 | 340 | 3 | 1 | 767 | 1 | 772 | 0.0 | 904 |
| MS.gene070123.t1 | MTR_6g012870 | 31.163 | 722 | 467 | 10 | 4 | 722 | 3 | 697 | 2.26e-130 | 405 |
| MS.gene070123.t1 | MTR_7g011610 | 32.303 | 712 | 449 | 10 | 9 | 715 | 8 | 691 | 2.25e-129 | 405 |
| MS.gene070123.t1 | MTR_2g018780 | 32.159 | 681 | 427 | 8 | 22 | 689 | 21 | 679 | 2.54e-120 | 379 |
| MS.gene070123.t1 | MTR_1g017170 | 29.262 | 786 | 492 | 14 | 10 | 763 | 9 | 762 | 3.04e-115 | 367 |
| MS.gene070123.t1 | MTR_4g082340 | 31.420 | 697 | 438 | 12 | 2 | 690 | 5 | 669 | 9.95e-115 | 364 |
| MS.gene070123.t1 | MTR_5g042560 | 32.451 | 718 | 450 | 14 | 2 | 715 | 5 | 691 | 1.29e-113 | 361 |
| MS.gene070123.t1 | MTR_4g082340 | 31.404 | 691 | 434 | 12 | 2 | 684 | 5 | 663 | 5.80e-113 | 359 |
| MS.gene070123.t1 | MTR_4g082340 | 30.575 | 713 | 454 | 11 | 2 | 701 | 5 | 689 | 6.84e-113 | 360 |
| MS.gene070123.t1 | MTR_3g019070 | 31.163 | 722 | 464 | 14 | 10 | 724 | 9 | 704 | 1.06e-111 | 356 |
| MS.gene070123.t1 | MTR_6g012870 | 30.795 | 604 | 394 | 8 | 4 | 607 | 3 | 582 | 9.71e-110 | 347 |
| MS.gene070123.t1 | MTR_3g103560 | 29.799 | 698 | 442 | 11 | 10 | 695 | 9 | 670 | 1.63e-93 | 309 |
| MS.gene070123.t1 | MTR_1g017170 | 29.784 | 601 | 387 | 9 | 10 | 607 | 9 | 577 | 1.16e-92 | 303 |
| MS.gene070123.t1 | MTR_4g082340 | 30.130 | 614 | 389 | 12 | 2 | 607 | 5 | 586 | 1.13e-90 | 297 |
| MS.gene070123.t1 | MTR_4g082340 | 32.712 | 483 | 303 | 8 | 214 | 690 | 37 | 503 | 5.52e-86 | 283 |
| MS.gene070123.t1 | MTR_4g082340 | 32.573 | 482 | 303 | 8 | 215 | 690 | 36 | 501 | 2.05e-85 | 282 |
| MS.gene070123.t1 | MTR_8g074970 | 21.896 | 443 | 284 | 14 | 86 | 476 | 75 | 507 | 5.22e-12 | 70.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070123.t1 | AT1G32090 | 72.311 | 809 | 208 | 6 | 1 | 796 | 1 | 806 | 0.0 | 1152 |
| MS.gene070123.t1 | AT4G22120 | 58.431 | 765 | 310 | 3 | 1 | 757 | 1 | 765 | 0.0 | 947 |
| MS.gene070123.t1 | AT4G22120 | 58.431 | 765 | 310 | 3 | 1 | 757 | 1 | 765 | 0.0 | 947 |
| MS.gene070123.t1 | AT4G22120 | 58.431 | 765 | 310 | 3 | 1 | 757 | 1 | 765 | 0.0 | 947 |
| MS.gene070123.t1 | AT4G22120 | 58.431 | 765 | 310 | 3 | 1 | 757 | 1 | 765 | 0.0 | 947 |
| MS.gene070123.t1 | AT4G22120 | 58.431 | 765 | 310 | 3 | 1 | 757 | 1 | 765 | 0.0 | 947 |
| MS.gene070123.t1 | AT4G22120 | 58.431 | 765 | 310 | 3 | 1 | 757 | 1 | 765 | 0.0 | 947 |
| MS.gene070123.t1 | AT3G21620 | 60.905 | 729 | 284 | 1 | 1 | 729 | 1 | 728 | 0.0 | 945 |
| MS.gene070123.t1 | AT4G02900 | 59.338 | 755 | 306 | 1 | 1 | 755 | 1 | 754 | 0.0 | 935 |
| MS.gene070123.t1 | AT4G02900 | 59.338 | 755 | 306 | 1 | 1 | 755 | 1 | 754 | 0.0 | 935 |
| MS.gene070123.t1 | AT4G02900 | 59.338 | 755 | 306 | 1 | 1 | 755 | 1 | 754 | 0.0 | 935 |
| MS.gene070123.t1 | AT1G11960 | 57.708 | 759 | 320 | 1 | 1 | 758 | 1 | 759 | 0.0 | 931 |
| MS.gene070123.t1 | AT1G11960 | 57.708 | 759 | 320 | 1 | 1 | 758 | 1 | 759 | 0.0 | 931 |
| MS.gene070123.t1 | AT4G04340 | 60.779 | 719 | 279 | 2 | 1 | 716 | 1 | 719 | 0.0 | 920 |
| MS.gene070123.t1 | AT4G04340 | 60.779 | 719 | 279 | 2 | 1 | 716 | 1 | 719 | 0.0 | 920 |
| MS.gene070123.t1 | AT4G04340 | 60.779 | 719 | 279 | 2 | 1 | 716 | 1 | 719 | 0.0 | 920 |
| MS.gene070123.t1 | AT1G62320 | 58.409 | 767 | 311 | 3 | 1 | 759 | 1 | 767 | 0.0 | 918 |
| MS.gene070123.t1 | AT1G62320 | 58.409 | 767 | 311 | 3 | 1 | 759 | 1 | 767 | 0.0 | 918 |
| MS.gene070123.t1 | AT1G62320 | 58.149 | 767 | 311 | 4 | 1 | 759 | 1 | 765 | 0.0 | 910 |
| MS.gene070123.t1 | AT4G15430 | 58.483 | 725 | 300 | 1 | 1 | 724 | 1 | 725 | 0.0 | 902 |
| MS.gene070123.t1 | AT4G15430 | 58.402 | 726 | 300 | 2 | 1 | 724 | 1 | 726 | 0.0 | 897 |
| MS.gene070123.t1 | AT1G62320 | 57.366 | 767 | 310 | 5 | 1 | 759 | 1 | 758 | 0.0 | 891 |
| MS.gene070123.t1 | AT1G11960 | 59.868 | 608 | 243 | 1 | 1 | 607 | 1 | 608 | 0.0 | 775 |
| MS.gene070123.t1 | AT1G62320 | 60.691 | 608 | 238 | 1 | 1 | 607 | 1 | 608 | 0.0 | 763 |
| MS.gene070123.t1 | AT4G02900 | 58.853 | 593 | 244 | 0 | 163 | 755 | 1 | 593 | 0.0 | 758 |
| MS.gene070123.t1 | AT3G01100 | 31.927 | 711 | 456 | 8 | 10 | 717 | 9 | 694 | 6.61e-134 | 414 |
| MS.gene070123.t1 | AT3G01100 | 31.927 | 711 | 456 | 8 | 10 | 717 | 55 | 740 | 5.03e-133 | 413 |
| MS.gene070123.t1 | AT1G69450 | 31.198 | 718 | 456 | 12 | 2 | 714 | 5 | 689 | 1.76e-127 | 398 |
| MS.gene070123.t1 | AT1G69450 | 31.198 | 718 | 456 | 12 | 2 | 714 | 5 | 689 | 1.76e-127 | 398 |
| MS.gene070123.t1 | AT1G69450 | 30.067 | 745 | 456 | 13 | 2 | 714 | 5 | 716 | 6.09e-122 | 384 |
| MS.gene070123.t1 | AT3G01100 | 32.378 | 593 | 383 | 6 | 128 | 717 | 2 | 579 | 1.08e-114 | 360 |
| MS.gene070123.t1 | AT1G58520 | 32.558 | 688 | 428 | 10 | 10 | 690 | 9 | 667 | 1.18e-111 | 357 |
| MS.gene070123.t1 | AT1G58520 | 32.558 | 688 | 428 | 10 | 10 | 690 | 9 | 667 | 1.18e-111 | 357 |
| MS.gene070123.t1 | AT1G58520 | 32.558 | 688 | 428 | 10 | 10 | 690 | 9 | 667 | 1.18e-111 | 357 |
| MS.gene070123.t1 | AT1G58520 | 32.558 | 688 | 428 | 10 | 10 | 690 | 9 | 667 | 1.18e-111 | 357 |
| MS.gene070123.t1 | AT1G58520 | 32.558 | 688 | 428 | 10 | 10 | 690 | 9 | 667 | 1.18e-111 | 357 |
| MS.gene070123.t1 | AT3G54510 | 31.609 | 696 | 434 | 14 | 3 | 690 | 2 | 663 | 9.56e-111 | 354 |
| MS.gene070123.t1 | AT3G01100 | 30.936 | 598 | 391 | 6 | 10 | 607 | 9 | 584 | 2.57e-107 | 341 |
| MS.gene070123.t1 | AT1G10090 | 31.358 | 692 | 440 | 9 | 10 | 696 | 9 | 670 | 1.22e-105 | 342 |
| MS.gene070123.t1 | AT1G30360 | 32.084 | 667 | 416 | 12 | 75 | 724 | 61 | 707 | 8.31e-104 | 336 |
| MS.gene070123.t1 | AT1G58520 | 33.037 | 563 | 357 | 7 | 133 | 690 | 2 | 549 | 1.55e-94 | 308 |
| MS.gene070123.t1 | AT3G54510 | 31.703 | 593 | 369 | 13 | 106 | 690 | 4 | 568 | 3.82e-94 | 307 |
| MS.gene070123.t1 | AT3G54510 | 31.703 | 593 | 369 | 13 | 106 | 690 | 4 | 568 | 3.82e-94 | 307 |
| MS.gene070123.t1 | AT3G54510 | 31.158 | 613 | 380 | 14 | 3 | 607 | 2 | 580 | 2.28e-89 | 293 |
| MS.gene070123.t1 | AT3G54510 | 32.871 | 505 | 306 | 12 | 194 | 690 | 5 | 484 | 5.74e-82 | 272 |
| MS.gene070123.t1 | AT3G54510 | 31.176 | 510 | 315 | 13 | 106 | 607 | 4 | 485 | 3.33e-73 | 247 |
| MS.gene070123.t1 | AT4G35870 | 22.345 | 452 | 290 | 17 | 86 | 487 | 92 | 532 | 1.80e-14 | 78.2 |
Find 173 sgRNAs with CRISPR-Local
Find 337 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTTCAATCCCTTGCAAATT+TGG | 0.134209 | 5.4:-18178855 | MS.gene070123:CDS |
| ATGTTCCGCCTAAATCTTTA+AGG | 0.144840 | 5.4:-18180948 | MS.gene070123:intron |
| GTTCTTTGCCTTTGCATATT+TGG | 0.154654 | 5.4:-18177987 | MS.gene070123:CDS |
| GACTGGATGTTTAGGGCTTT+GGG | 0.172806 | 5.4:-18179599 | MS.gene070123:CDS |
| CTTCAACTATATTTCCTTCT+TGG | 0.194974 | 5.4:-18178058 | MS.gene070123:CDS |
| CCACCACTAATATACCATTT+AGG | 0.197947 | 5.4:+18182440 | None:intergenic |
| GCAGAGTTTATTTCCCTAAA+TGG | 0.214084 | 5.4:-18182454 | MS.gene070123:CDS |
| CTAAATATGCCTTTATGTTT+AGG | 0.222422 | 5.4:+18177237 | None:intergenic |
| ACAAAATTTGCAGAGCTTCT+TGG | 0.225744 | 5.4:+18182407 | None:intergenic |
| TCACGACCAATTCTCTTCTT+AGG | 0.230855 | 5.4:+18180998 | None:intergenic |
| ATTAATGAGATTGCATTTCT+TGG | 0.245647 | 5.4:-18180657 | MS.gene070123:CDS |
| TGAAGACTCGGAAGAGTTTC+GGG | 0.248849 | 5.4:+18178076 | None:intergenic |
| AGACTGGATGTTTAGGGCTT+TGG | 0.249261 | 5.4:-18179600 | MS.gene070123:CDS |
| TATTCATACCTTAAAGATTT+AGG | 0.252033 | 5.4:+18180940 | None:intergenic |
| TTCACTTACAATTCTATTAC+TGG | 0.255562 | 5.4:+18178800 | None:intergenic |
| ATGAAAGCGCTGCTGCATTT+TGG | 0.281074 | 5.4:-18177842 | MS.gene070123:CDS |
| GATGGCTGGGCTGGAATTGC+TGG | 0.289571 | 5.4:-18178208 | MS.gene070123:CDS |
| TGGAATACATGTTAACAATA+TGG | 0.299556 | 5.4:-18180718 | MS.gene070123:CDS |
| CACCACTAATATACCATTTA+GGG | 0.310330 | 5.4:+18182441 | None:intergenic |
| ATGGAAACTCCAATTGTTCT+AGG | 0.310906 | 5.4:+18178271 | None:intergenic |
| AGGAATGTCCCTCGTATTTC+TGG | 0.310960 | 5.4:-18180475 | MS.gene070123:CDS |
| GCCACTGGCAAAATAGATTT+AGG | 0.312597 | 5.4:+18179094 | None:intergenic |
| ACAACGTTATTACAAGTTTA+CGG | 0.313644 | 5.4:+18178921 | None:intergenic |
| AAAGAGATAGACTTCAAAAT+TGG | 0.320726 | 5.4:-18180046 | MS.gene070123:CDS |
| TTGAAGACTCGGAAGAGTTT+CGG | 0.321291 | 5.4:+18178075 | None:intergenic |
| CAGCTTAAAGATGTTTATTC+CGG | 0.327398 | 5.4:-18181082 | MS.gene070123:CDS |
| ACTTCGAATGATCTTAAGAT+TGG | 0.329447 | 5.4:+18177197 | None:intergenic |
| GCAAGCCAAACAGAAGAATC+TGG | 0.335055 | 5.4:+18177778 | None:intergenic |
| CTTCTTTATAACTTACATAA+TGG | 0.340191 | 5.4:-18178233 | MS.gene070123:CDS |
| TTCTTGGGAAGCATAATAAC+TGG | 0.340985 | 5.4:-18178443 | MS.gene070123:CDS |
| TTCTCAGAATTTACACTCTT+GGG | 0.344073 | 5.4:-18182265 | MS.gene070123:intron |
| TGTTAAGGAACTTGATAAAC+TGG | 0.350242 | 5.4:-18179539 | MS.gene070123:intron |
| ATAACTTACATAATGGTTGA+TGG | 0.352191 | 5.4:-18178226 | MS.gene070123:CDS |
| TTTCTCAGAATTTACACTCT+TGG | 0.352893 | 5.4:-18182266 | MS.gene070123:CDS |
| TATAGAATTCCTAGAACAAT+TGG | 0.359730 | 5.4:-18178280 | MS.gene070123:intron |
| CAGAGCCACGTGACATATAT+TGG | 0.362521 | 5.4:-18178979 | MS.gene070123:CDS |
| CAGCGCTTTCATATCGTTGA+TGG | 0.362560 | 5.4:+18177853 | None:intergenic |
| AACCACCCAGATCATTATAT+TGG | 0.363209 | 5.4:-18180412 | MS.gene070123:CDS |
| TTAACATCACATACCTCAAC+AGG | 0.367084 | 5.4:+18177642 | None:intergenic |
| CTATCCCAGATTCTTCTGTT+TGG | 0.376714 | 5.4:-18177783 | MS.gene070123:CDS |
| TGCTGTCCAATATAATGATC+TGG | 0.380778 | 5.4:+18180406 | None:intergenic |
| GAACCAGGCTCACTCAATAT+TGG | 0.382638 | 5.4:+18177098 | None:intergenic |
| TTCCCTAAATGGTATATTAG+TGG | 0.385018 | 5.4:-18182443 | MS.gene070123:CDS |
| CGAGGAAAGGCCATGGATCC+AGG | 0.387525 | 5.4:-18178112 | MS.gene070123:CDS |
| ATAAAGAAGGTAGCCTTCAT+TGG | 0.391823 | 5.4:+18178247 | None:intergenic |
| AAATAAACTCTGCCATTGAT+TGG | 0.399211 | 5.4:+18182464 | None:intergenic |
| CTACACTCTGGTTGACTGAT+TGG | 0.399366 | 5.4:-18179006 | MS.gene070123:CDS |
| TGAAATGCAAATGTCAATAT+TGG | 0.405924 | 5.4:+18177708 | None:intergenic |
| AGCAATGGCTAAGGATATAC+TGG | 0.406064 | 5.4:-18177279 | MS.gene070123:CDS |
| TTGACAGTTGGCCTTGTATC+CGG | 0.409375 | 5.4:+18179990 | None:intergenic |
| TACACTCTGGTTGACTGATT+GGG | 0.413645 | 5.4:-18179005 | MS.gene070123:CDS |
| AAGGTTGATGCTGGTGTTGA+TGG | 0.413776 | 5.4:+18177054 | None:intergenic |
| TGGAGTTTCCATTCCAATGA+AGG | 0.420175 | 5.4:-18178260 | MS.gene070123:CDS |
| ATATTTGGTTTATCGTCATC+AGG | 0.421215 | 5.4:-18177972 | MS.gene070123:intron |
| GGCCTTTCCTCGATCTCTCT+CGG | 0.423810 | 5.4:+18178123 | None:intergenic |
| CGAAGTTGAAGAAGAGGAAC+TGG | 0.425006 | 5.4:-18177180 | MS.gene070123:CDS |
| TAATAATACTCGGGAGGTAA+AGG | 0.436923 | 5.4:+18177008 | None:intergenic |
| CAGGCGTGTAGAGCAATTTA+CGG | 0.443174 | 5.4:-18180624 | MS.gene070123:intron |
| CAATATATGTCACGTGGCTC+TGG | 0.443766 | 5.4:+18178980 | None:intergenic |
| ATCAACACTCGAGCGGAAAA+CGG | 0.453049 | 5.4:-18178501 | MS.gene070123:CDS |
| GCATAATGAGTAGGGGAGGT+TGG | 0.455060 | 5.4:+18176981 | None:intergenic |
| ATAATGGTTGATGGCTGGGC+TGG | 0.456275 | 5.4:-18178217 | MS.gene070123:CDS |
| ATTGATAGGCATAATGAGTA+GGG | 0.460012 | 5.4:+18176973 | None:intergenic |
| TATGCCTTTATGTTTAGGTC+AGG | 0.461900 | 5.4:+18177242 | None:intergenic |
| CGGACAGTTAAAGAAACAAA+TGG | 0.466128 | 5.4:+18178941 | None:intergenic |
| AACGTTGTCGGTGTTTGCCT+TGG | 0.466357 | 5.4:-18178906 | MS.gene070123:CDS |
| CCCTCGTATTTCTGGTCACT+CGG | 0.467875 | 5.4:-18180467 | MS.gene070123:CDS |
| CTAAGAATTCAACCAATCAA+TGG | 0.468116 | 5.4:-18182476 | MS.gene070123:CDS |
| GTACTATGACCAACATGTTA+AGG | 0.469686 | 5.4:-18179554 | MS.gene070123:CDS |
| AAAATATTATTACTTTATGC+TGG | 0.475588 | 5.4:-18178474 | MS.gene070123:CDS |
| CTTACATAATGGTTGATGGC+TGG | 0.475746 | 5.4:-18178222 | MS.gene070123:CDS |
| CAATCCCTTGCAAATTTGGA+TGG | 0.477041 | 5.4:-18178851 | MS.gene070123:CDS |
| TCTTTCATTCAACTCACGTT+GGG | 0.478282 | 5.4:-18179068 | MS.gene070123:CDS |
| ATTTCTTGGCCTCACAGCGC+AGG | 0.478578 | 5.4:-18180643 | MS.gene070123:CDS |
| AATAATACTCGGGAGGTAAA+GGG | 0.478949 | 5.4:+18177009 | None:intergenic |
| GATTGCTGCAGGTAGTTGTC+AGG | 0.480805 | 5.4:-18180495 | MS.gene070123:intron |
| GACTAGCAACATGATGAGTT+TGG | 0.483095 | 5.4:+18177120 | None:intergenic |
| TTCATCAAGTCCTTTCTACA+AGG | 0.483720 | 5.4:-18178614 | MS.gene070123:CDS |
| AGAACCTGACCTAAACATAA+AGG | 0.484818 | 5.4:-18177246 | MS.gene070123:CDS |
| TATGTTTAGGTCAGGTTCTG+TGG | 0.485151 | 5.4:+18177250 | None:intergenic |
| AGATAGACTTCAAAATTGGC+TGG | 0.489980 | 5.4:-18180042 | MS.gene070123:CDS |
| ATCCACACTCCCTGGATCCA+TGG | 0.491554 | 5.4:+18178102 | None:intergenic |
| TCGGGAAAATCCACACTCCC+TGG | 0.492669 | 5.4:+18178094 | None:intergenic |
| GATGTTTAGGGCTTTGGGGT+AGG | 0.497161 | 5.4:-18179594 | MS.gene070123:CDS |
| AGTATGAAAGGAAGAAGGAT+TGG | 0.497454 | 5.4:+18178013 | None:intergenic |
| GAAGGTAGCCTTCATTGGAA+TGG | 0.498492 | 5.4:+18178252 | None:intergenic |
| ATCATTCGAAGTTGAAGAAG+AGG | 0.498829 | 5.4:-18177186 | MS.gene070123:CDS |
| CAAGACCATCCAAATTTGCA+AGG | 0.501112 | 5.4:+18178846 | None:intergenic |
| AAGAAACAAATGGTATGGAC+AGG | 0.511815 | 5.4:+18178951 | None:intergenic |
| AATGAGTAGGGGAGGTTGGA+TGG | 0.511873 | 5.4:+18176985 | None:intergenic |
| ATCAGAAGCATCCGGATACA+AGG | 0.511875 | 5.4:-18180001 | MS.gene070123:CDS |
| AGGGATTGAACAAAAGCAAT+GGG | 0.516576 | 5.4:+18178866 | None:intergenic |
| GATTCTCAGATTAAAGCCAT+TGG | 0.518478 | 5.4:-18178182 | MS.gene070123:CDS |
| AAATTACATACCTTGACAGT+TGG | 0.518886 | 5.4:+18179978 | None:intergenic |
| TATCAAGTTCCTTAACATGT+TGG | 0.519247 | 5.4:+18179545 | None:intergenic |
| TTACATAATGGTTGATGGCT+GGG | 0.521446 | 5.4:-18178221 | MS.gene070123:CDS |
| GACATAATCATCAGAACTGA+TGG | 0.521806 | 5.4:+18178548 | None:intergenic |
| TTCTTTCATTCAACTCACGT+TGG | 0.523734 | 5.4:-18179069 | MS.gene070123:CDS |
| TAAACTTGTAATAACGTTGT+CGG | 0.527107 | 5.4:-18178918 | MS.gene070123:CDS |
| AGATCATTATATTGGACAGC+AGG | 0.531821 | 5.4:-18180404 | MS.gene070123:intron |
| GATGCTTCTGATACTTGATC+CGG | 0.532516 | 5.4:+18180012 | None:intergenic |
| AGTTAAAGAAACAAATGGTA+TGG | 0.532928 | 5.4:+18178946 | None:intergenic |
| AGTCCAATATTGAGTGAGCC+TGG | 0.534008 | 5.4:-18177101 | MS.gene070123:CDS |
| GTCCCACTTGATACATTGAC+TGG | 0.534438 | 5.4:+18181030 | None:intergenic |
| TCATTGTAATGAGGCGGTGA+AGG | 0.536265 | 5.4:+18177035 | None:intergenic |
| ACAGGGTACTTCCTAAATGC+TGG | 0.536427 | 5.4:+18177660 | None:intergenic |
| CAAGCCAAACAGAAGAATCT+GGG | 0.538336 | 5.4:+18177779 | None:intergenic |
| TGTGGTGGTGAAGGTGAACC+AGG | 0.540389 | 5.4:+18177083 | None:intergenic |
| AAAATTGGCTGGACTACTAC+CGG | 0.541063 | 5.4:-18180031 | MS.gene070123:CDS |
| GGAACTGGTTGAACTAGAAA+CGG | 0.543720 | 5.4:-18177165 | MS.gene070123:CDS |
| TATTGATAGGCATAATGAGT+AGG | 0.544158 | 5.4:+18176972 | None:intergenic |
| GCAAAGAACACAAGTATGAA+AGG | 0.544166 | 5.4:+18178001 | None:intergenic |
| ACTGAAATTATTAATCATGC+TGG | 0.544178 | 5.4:-18182305 | MS.gene070123:CDS |
| ATGTATTGTGCAGATGTCAT+TGG | 0.546338 | 5.4:-18179140 | MS.gene070123:intron |
| CTCTACACGCCTGCGCTGTG+AGG | 0.550335 | 5.4:+18180634 | None:intergenic |
| AGGAAATATAGTTGAAGACT+CGG | 0.552639 | 5.4:+18178064 | None:intergenic |
| GTTTATTCCGGTGACAATTG+TGG | 0.553997 | 5.4:-18181070 | MS.gene070123:CDS |
| ACTGGATGTTTAGGGCTTTG+GGG | 0.556288 | 5.4:-18179598 | MS.gene070123:CDS |
| GGCCATGGATCCAGGGAGTG+TGG | 0.559197 | 5.4:-18178104 | MS.gene070123:CDS |
| TTAAGATGATATATAACCAA+TGG | 0.560625 | 5.4:+18178166 | None:intergenic |
| CATTATGTAAGTTATAAAGA+AGG | 0.562057 | 5.4:+18178234 | None:intergenic |
| AAGACCATCCAAATTTGCAA+GGG | 0.563432 | 5.4:+18178847 | None:intergenic |
| GAGAGATCGAGGAAAGGCCA+TGG | 0.565449 | 5.4:-18178119 | MS.gene070123:CDS |
| GGGAAGAAAACCTTGTAGAA+AGG | 0.568920 | 5.4:+18178604 | None:intergenic |
| TCTATTACTGGTCTGAGGAA+AGG | 0.569151 | 5.4:+18178812 | None:intergenic |
| TGGACATGATGTGGTGGTGA+AGG | 0.570685 | 5.4:+18177074 | None:intergenic |
| ATTGGTAACATTATAAGCAA+AGG | 0.575298 | 5.4:+18177726 | None:intergenic |
| GGATACAAGGCCAACTGTCA+AGG | 0.577134 | 5.4:-18179988 | MS.gene070123:intron |
| GATCAAGTATCAGAAGCATC+CGG | 0.578609 | 5.4:-18180009 | MS.gene070123:CDS |
| AAGGGATTGAACAAAAGCAA+TGG | 0.581677 | 5.4:+18178865 | None:intergenic |
| TATTCAGGAAGCAATGGCTA+AGG | 0.583268 | 5.4:-18177288 | MS.gene070123:intron |
| ACACAAGTATGAAAGGAAGA+AGG | 0.589413 | 5.4:+18178008 | None:intergenic |
| ATTCCAGTCAATGTATCAAG+TGG | 0.590572 | 5.4:-18181033 | MS.gene070123:CDS |
| CCTAAATGGTATATTAGTGG+TGG | 0.591348 | 5.4:-18182440 | MS.gene070123:CDS |
| TCACTCATTCTCAAAGCTTG+AGG | 0.592261 | 5.4:+18182329 | None:intergenic |
| ATTTAGGAAGTACCCTGTTG+AGG | 0.593328 | 5.4:-18177655 | MS.gene070123:intron |
| TTGACCTATTCAGGAAGCAA+TGG | 0.593825 | 5.4:-18177294 | MS.gene070123:intron |
| AATAACAAAACATACTGTGT+AGG | 0.595294 | 5.4:+18178380 | None:intergenic |
| GGTTGGATGGTAATAATACT+CGG | 0.596727 | 5.4:+18176998 | None:intergenic |
| ACGATAAACCAAATATGCAA+AGG | 0.598915 | 5.4:+18177979 | None:intergenic |
| CAGCATACACAACACCAAGA+AGG | 0.601030 | 5.4:+18178044 | None:intergenic |
| GCTGTCCAATATAATGATCT+GGG | 0.601815 | 5.4:+18180407 | None:intergenic |
| AGGAGTGCCACAATTGTCAC+CGG | 0.602637 | 5.4:+18181063 | None:intergenic |
| CAATCAGTCAACCAGAGTGT+AGG | 0.605255 | 5.4:+18179007 | None:intergenic |
| TCATACCTTAAAGATTTAGG+CGG | 0.607235 | 5.4:+18180943 | None:intergenic |
| CATTGACTGGAATAAGAATG+AGG | 0.607470 | 5.4:+18181043 | None:intergenic |
| ACAATTCTATTACTGGTCTG+AGG | 0.612788 | 5.4:+18178807 | None:intergenic |
| GTATTAAGCTTGCGATGATG+CGG | 0.613231 | 5.4:+18177805 | None:intergenic |
| AACCGAGAGAGATCGAGGAA+AGG | 0.613495 | 5.4:-18178125 | MS.gene070123:CDS |
| TTGAATGAAAGAAAAGCCAC+TGG | 0.615968 | 5.4:+18179079 | None:intergenic |
| ATGGCAACTCTTCAAGACAT+TGG | 0.616464 | 5.4:-18182557 | MS.gene070123:CDS |
| GTTAAAACCGAGAGAGATCG+AGG | 0.618456 | 5.4:-18178130 | MS.gene070123:CDS |
| ATGATGCGGCTGTGAACTTG+TGG | 0.621469 | 5.4:+18177819 | None:intergenic |
| AAAGGGTAGTCATTGTAATG+AGG | 0.622010 | 5.4:+18177026 | None:intergenic |
| GAGGAAAGGCCATGGATCCA+GGG | 0.622176 | 5.4:-18178111 | MS.gene070123:CDS |
| ATAGGCATAATGAGTAGGGG+AGG | 0.624339 | 5.4:+18176977 | None:intergenic |
| TTGATAGGCATAATGAGTAG+GGG | 0.627933 | 5.4:+18176974 | None:intergenic |
| GAGGCGGTGAAGGTTGATGC+TGG | 0.632289 | 5.4:+18177045 | None:intergenic |
| TTCCAGTCAATGTATCAAGT+GGG | 0.644171 | 5.4:-18181032 | MS.gene070123:CDS |
| TCACTCGGTATCAGATAGTG+TGG | 0.644469 | 5.4:-18180452 | MS.gene070123:CDS |
| TGGTGTTGATGGACATGATG+TGG | 0.645171 | 5.4:+18177065 | None:intergenic |
| GTTGGATGGTAATAATACTC+GGG | 0.651526 | 5.4:+18176999 | None:intergenic |
| GGGTAGTCATTGTAATGAGG+CGG | 0.655813 | 5.4:+18177029 | None:intergenic |
| AAATGCTAACAAGAATGCAA+AGG | 0.657265 | 5.4:+18182505 | None:intergenic |
| TGTTGATGGACATGATGTGG+TGG | 0.659291 | 5.4:+18177068 | None:intergenic |
| GGATGGTAATAATACTCGGG+AGG | 0.670756 | 5.4:+18177002 | None:intergenic |
| TTGCATTATCAACACTCGAG+CGG | 0.680054 | 5.4:-18178508 | MS.gene070123:CDS |
| TTTCGCCAATATATGTCACG+TGG | 0.701186 | 5.4:+18178974 | None:intergenic |
| AATCATGTAGAAGAATACCA+AGG | 0.704931 | 5.4:+18178889 | None:intergenic |
| CCGAGTGACCAGAAATACGA+GGG | 0.706704 | 5.4:+18180467 | None:intergenic |
| ACCGAGTGACCAGAAATACG+AGG | 0.719464 | 5.4:+18180466 | None:intergenic |
| GTCCAATATAATGATCTGGG+TGG | 0.744963 | 5.4:+18180410 | None:intergenic |
| TAACATCACATACCTCAACA+GGG | 0.746574 | 5.4:+18177643 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATATATAAAAATATTTTAA+GGG | + | chr5.4:18180942-18180961 | None:intergenic | 0.0% |
| !! | AAATATAAATAAATAAACTC+AGG | - | chr5.4:18181945-18181964 | MS.gene070123:intron | 10.0% |
| !! | AATATTATACTTATTTGAAA+CGG | + | chr5.4:18179307-18179326 | None:intergenic | 10.0% |
| !!! | TAATTTGATAAAATTGATTT+TGG | - | chr5.4:18177963-18177982 | MS.gene070123:intron | 10.0% |
| !!! | TTGTTTTAATTATGTTAAAA+AGG | - | chr5.4:18177413-18177432 | MS.gene070123:intron | 10.0% |
| !! | AAAATATTATTACTTTATGC+TGG | - | chr5.4:18181039-18181058 | MS.gene070123:CDS | 15.0% |
| !! | ATAATATTTATACATGATGT+TGG | - | chr5.4:18179319-18179338 | MS.gene070123:intron | 15.0% |
| !! | TTTAATATTTGATAGAATCA+GGG | + | chr5.4:18180803-18180822 | None:intergenic | 15.0% |
| !! | TTTCTTTATCAATTTATGTT+TGG | - | chr5.4:18178044-18178063 | MS.gene070123:CDS | 15.0% |
| !!! | CTTTTTAAAAAACAAAGTTT+AGG | - | chr5.4:18181997-18182016 | MS.gene070123:intron | 15.0% |
| !!! | GGAATAATAATTTGTAATAT+TGG | + | chr5.4:18181913-18181932 | None:intergenic | 15.0% |
| !!! | GTTAAAAAGGTTTAATTTTT+AGG | - | chr5.4:18177426-18177445 | MS.gene070123:intron | 15.0% |
| !!! | TAATTTTTTCCATGTTTTTT+CGG | - | chr5.4:18181169-18181188 | MS.gene070123:intron | 15.0% |
| !!! | TCTGATTTTTAAAACATTAA+TGG | - | chr5.4:18179799-18179818 | MS.gene070123:intron | 15.0% |
| !!! | TTTTTTATATTATTTAACCG+TGG | + | chr5.4:18179632-18179651 | None:intergenic | 15.0% |
| !! | AAATAATATGAAACAGCTTA+TGG | + | chr5.4:18180127-18180146 | None:intergenic | 20.0% |
| !! | AGAATTTAAATGAACTAGAA+GGG | + | chr5.4:18178972-18178991 | None:intergenic | 20.0% |
| !! | ATGATTATGTCAAAAATTGA+GGG | - | chr5.4:18180977-18180996 | MS.gene070123:CDS | 20.0% |
| !! | CATTATGTAAGTTATAAAGA+AGG | + | chr5.4:18181282-18181301 | None:intergenic | 20.0% |
| !! | CTTCTTTATAACTTACATAA+TGG | - | chr5.4:18181280-18181299 | MS.gene070123:intron | 20.0% |
| !! | GAAATATTCAAATAACAATG+AGG | + | chr5.4:18180294-18180313 | None:intergenic | 20.0% |
| !! | GTTTAATATTTGATAGAATC+AGG | + | chr5.4:18180804-18180823 | None:intergenic | 20.0% |
| !! | TAAACTCTAGATTAACATTA+TGG | - | chr5.4:18180819-18180838 | MS.gene070123:intron | 20.0% |
| !! | TAAATAAATAAACTCAGGTT+TGG | - | chr5.4:18181950-18181969 | MS.gene070123:intron | 20.0% |
| !! | TATTCATACCTTAAAGATTT+AGG | + | chr5.4:18178576-18178595 | None:intergenic | 20.0% |
| !! | TTAAGATGATATATAACCAA+TGG | + | chr5.4:18181350-18181369 | None:intergenic | 20.0% |
| !! | TTTATATTTATATTCGAGAC+TGG | + | chr5.4:18181934-18181953 | None:intergenic | 20.0% |
| !!! | AACTCATTTTCTTTTACTTT+TGG | - | chr5.4:18180869-18180888 | MS.gene070123:intron | 20.0% |
| !!! | CAATTTATGTTTGGATATTT+TGG | - | chr5.4:18178053-18178072 | MS.gene070123:CDS | 20.0% |
| !!! | CTTATTTGACTTTTCTTAAT+TGG | - | chr5.4:18177158-18177177 | MS.gene070123:CDS | 20.0% |
| !!! | TAGGATCTTTTATAATTTTC+TGG | + | chr5.4:18180403-18180422 | None:intergenic | 20.0% |
| !!! | TTTTCCAATGTTTTAGAAAT+TGG | - | chr5.4:18179556-18179575 | MS.gene070123:CDS | 20.0% |
| !!! | TTTTCTATGCAATATGTTAA+GGG | - | chr5.4:18180011-18180030 | MS.gene070123:CDS | 20.0% |
| !!! | TTTTTCTATGCAATATGTTA+AGG | - | chr5.4:18180010-18180029 | MS.gene070123:CDS | 20.0% |
| ! | AAAAATGTGGAAACAAACAT+AGG | - | chr5.4:18178266-18178285 | MS.gene070123:CDS | 25.0% |
| ! | AAAGAAAGTTGAAAACTACA+CGG | + | chr5.4:18177705-18177724 | None:intergenic | 25.0% |
| ! | AAAGAGATAGACTTCAAAAT+TGG | - | chr5.4:18179467-18179486 | MS.gene070123:intron | 25.0% |
| ! | AAATTCTTAACATCTTCACA+AGG | + | chr5.4:18177651-18177670 | None:intergenic | 25.0% |
| ! | AATAACAAAACATACTGTGT+AGG | + | chr5.4:18181136-18181155 | None:intergenic | 25.0% |
| ! | ACAAAAAAGTGACTTATGTT+TGG | - | chr5.4:18178001-18178020 | MS.gene070123:CDS | 25.0% |
| ! | ACAACGTTATTACAAGTTTA+CGG | + | chr5.4:18180595-18180614 | None:intergenic | 25.0% |
| ! | ACTGAAATTATTAATCATGC+TGG | - | chr5.4:18177208-18177227 | MS.gene070123:CDS | 25.0% |
| ! | AGTTAAAGAAACAAATGGTA+TGG | + | chr5.4:18180570-18180589 | None:intergenic | 25.0% |
| ! | ATAACTTACATAATGGTTGA+TGG | - | chr5.4:18181287-18181306 | MS.gene070123:intron | 25.0% |
| ! | ATTAAATTGTTTATCCAGAC+AGG | - | chr5.4:18180260-18180279 | MS.gene070123:intron | 25.0% |
| ! | ATTAATGAGATTGCATTTCT+TGG | - | chr5.4:18178856-18178875 | MS.gene070123:CDS | 25.0% |
| ! | CTAAATATGCCTTTATGTTT+AGG | + | chr5.4:18182279-18182298 | None:intergenic | 25.0% |
| ! | GAATTTAAATGAACTAGAAG+GGG | + | chr5.4:18178971-18178990 | None:intergenic | 25.0% |
| ! | GAGAATTTAAATGAACTAGA+AGG | + | chr5.4:18178973-18178992 | None:intergenic | 25.0% |
| ! | GATGATTATGTCAAAAATTG+AGG | - | chr5.4:18180976-18180995 | MS.gene070123:CDS | 25.0% |
| ! | GGAAAAATGAATTTGACAAT+AGG | + | chr5.4:18179400-18179419 | None:intergenic | 25.0% |
| ! | TAAACTTGTAATAACGTTGT+CGG | - | chr5.4:18180595-18180614 | MS.gene070123:intron | 25.0% |
| ! | TGAAATGCAAATGTCAATAT+TGG | + | chr5.4:18181808-18181827 | None:intergenic | 25.0% |
| ! | TGGAATACATGTTAACAATA+TGG | - | chr5.4:18178795-18178814 | MS.gene070123:intron | 25.0% |
| ! | TTAAATTGTTTATCCAGACA+GGG | - | chr5.4:18180261-18180280 | MS.gene070123:intron | 25.0% |
| ! | TTCACTTACAATTCTATTAC+TGG | + | chr5.4:18180716-18180735 | None:intergenic | 25.0% |
| !! | AATTGACTTATTTGAGCTTA+TGG | - | chr5.4:18180048-18180067 | MS.gene070123:CDS | 25.0% |
| !! | ACTGTTTTCAAAAGTTATCT+TGG | + | chr5.4:18180161-18180180 | None:intergenic | 25.0% |
| !! | ATTGGTAACATTATAAGCAA+AGG | + | chr5.4:18181790-18181809 | None:intergenic | 25.0% |
| !! | TTTATTGTTGTTACGTGTAA+AGG | - | chr5.4:18177869-18177888 | MS.gene070123:CDS | 25.0% |
| !! | TTTTCAGACAAAAACGTTAT+AGG | + | chr5.4:18181573-18181592 | None:intergenic | 25.0% |
| !! | TTTTCAGCTTAACTCATAAT+GGG | - | chr5.4:18177360-18177379 | MS.gene070123:intron | 25.0% |
| !!! | AATTTTTAGGCACATTGTTT+AGG | - | chr5.4:18177439-18177458 | MS.gene070123:intron | 25.0% |
| !!! | AGGTTGATTTTGATATTGAT+AGG | + | chr5.4:18182557-18182576 | None:intergenic | 25.0% |
| !!! | ATTTTTTGTTCACATAGGAT+TGG | - | chr5.4:18178775-18178794 | MS.gene070123:intron | 25.0% |
| !!! | CTTTTAGATAGAATTGACTT+CGG | - | chr5.4:18178155-18178174 | MS.gene070123:CDS | 25.0% |
| !!! | GTGAAACATTGTTTTTAAGA+TGG | - | chr5.4:18177577-18177596 | MS.gene070123:intron | 25.0% |
| !!! | TTCAGATTTTTTGTTCACAT+AGG | - | chr5.4:18178770-18178789 | MS.gene070123:intron | 25.0% |
| !!! | TTTTAAAAATCAGACCAAAC+TGG | + | chr5.4:18179793-18179812 | None:intergenic | 25.0% |
| !!! | TTTTAGATAGAATTGACTTC+GGG | - | chr5.4:18178156-18178175 | MS.gene070123:CDS | 25.0% |
| AAAACAGTGTGATCAAATAG+TGG | - | chr5.4:18179184-18179203 | MS.gene070123:intron | 30.0% | |
| AAATAAACTCTGCCATTGAT+TGG | + | chr5.4:18177052-18177071 | None:intergenic | 30.0% | |
| AAATGCTAACAAGAATGCAA+AGG | + | chr5.4:18177011-18177030 | None:intergenic | 30.0% | |
| AAATTACATACCTTGACAGT+TGG | + | chr5.4:18179538-18179557 | None:intergenic | 30.0% | |
| AAGCCAAACGTAACAATTTA+TGG | - | chr5.4:18178202-18178221 | MS.gene070123:CDS | 30.0% | |
| AATCATGTAGAAGAATACCA+AGG | + | chr5.4:18180627-18180646 | None:intergenic | 30.0% | |
| ACGATAAACCAAATATGCAA+AGG | + | chr5.4:18181537-18181556 | None:intergenic | 30.0% | |
| ACTTCGAATGATCTTAAGAT+TGG | + | chr5.4:18182319-18182338 | None:intergenic | 30.0% | |
| AGCAACACTCATATAGTATA+TGG | - | chr5.4:18178335-18178354 | MS.gene070123:intron | 30.0% | |
| AGGAAATATAGTTGAAGACT+CGG | + | chr5.4:18181452-18181471 | None:intergenic | 30.0% | |
| ATATTTCTCTTGACCTATTC+AGG | - | chr5.4:18182210-18182229 | MS.gene070123:intron | 30.0% | |
| ATGTTAACGTGCAATGTATT+AGG | - | chr5.4:18181887-18181906 | MS.gene070123:intron | 30.0% | |
| ATTGATAGGCATAATGAGTA+GGG | + | chr5.4:18182543-18182562 | None:intergenic | 30.0% | |
| CACCACTAATATACCATTTA+GGG | + | chr5.4:18177075-18177094 | None:intergenic | 30.0% | |
| CAGCTTAAAGATGTTTATTC+CGG | - | chr5.4:18178431-18178450 | MS.gene070123:CDS | 30.0% | |
| CATAAATTGAGCAAGATTGA+AGG | + | chr5.4:18177828-18177847 | None:intergenic | 30.0% | |
| CTAAGAATTCAACCAATCAA+TGG | - | chr5.4:18177037-18177056 | MS.gene070123:CDS | 30.0% | |
| CTACTAGACAATTGTATTGA+AGG | + | chr5.4:18180845-18180864 | None:intergenic | 30.0% | |
| CTTCAACTATATTTCCTTCT+TGG | - | chr5.4:18181455-18181474 | MS.gene070123:intron | 30.0% | |
| GGGTAAAATCTGCAATTAAT+GGG | + | chr5.4:18178951-18178970 | None:intergenic | 30.0% | |
| TAAAATCTGCAATTAATGGG+AGG | + | chr5.4:18178948-18178967 | None:intergenic | 30.0% | |
| TACAATCCTTATGTTAGAAG+AGG | - | chr5.4:18178306-18178325 | MS.gene070123:intron | 30.0% | |
| TACTGTACTTCTTGTATTCA+TGG | + | chr5.4:18179831-18179850 | None:intergenic | 30.0% | |
| TATCAAGTTCCTTAACATGT+TGG | + | chr5.4:18179971-18179990 | None:intergenic | 30.0% | |
| TATCATATTGAGCATGTGAT+TGG | - | chr5.4:18177908-18177927 | MS.gene070123:intron | 30.0% | |
| TATTCAAATCCAGAATCTGA+TGG | - | chr5.4:18179869-18179888 | MS.gene070123:intron | 30.0% | |
| TATTGATAGGCATAATGAGT+AGG | + | chr5.4:18182544-18182563 | None:intergenic | 30.0% | |
| TCATACCTTAAAGATTTAGG+CGG | + | chr5.4:18178573-18178592 | None:intergenic | 30.0% | |
| TGACCATAAATTGTTACGTT+TGG | + | chr5.4:18178208-18178227 | None:intergenic | 30.0% | |
| TGTAGTTGCTTACTCATATT+TGG | - | chr5.4:18182169-18182188 | MS.gene070123:intron | 30.0% | |
| TGTGTTGTGAAAATTGTTCA+AGG | - | chr5.4:18177601-18177620 | MS.gene070123:intron | 30.0% | |
| TGTTAAGGAACTTGATAAAC+TGG | - | chr5.4:18179974-18179993 | MS.gene070123:intron | 30.0% | |
| TTCCCTAAATGGTATATTAG+TGG | - | chr5.4:18177070-18177089 | MS.gene070123:CDS | 30.0% | |
| TTCTCAGAATTTACACTCTT+GGG | - | chr5.4:18177248-18177267 | MS.gene070123:CDS | 30.0% | |
| TTTCCTTGTCCTTATTACTT+GGG | - | chr5.4:18180339-18180358 | MS.gene070123:intron | 30.0% | |
| TTTCTCAGAATTTACACTCT+TGG | - | chr5.4:18177247-18177266 | MS.gene070123:CDS | 30.0% | |
| ! | AACAACATATGAGACTGTTT+TGG | - | chr5.4:18180072-18180091 | MS.gene070123:CDS | 30.0% |
| ! | ATATTTGGTTTATCGTCATC+AGG | - | chr5.4:18181541-18181560 | MS.gene070123:intron | 30.0% |
| ! | ATTTTGTAGACTGGATGTTT+AGG | - | chr5.4:18179906-18179925 | MS.gene070123:intron | 30.0% |
| ! | GTTTTCAGCTTAACTCATAA+TGG | - | chr5.4:18177359-18177378 | MS.gene070123:intron | 30.0% |
| ! | GTTTTTCCTAAGAAGAGAAT+TGG | - | chr5.4:18178509-18178528 | MS.gene070123:CDS | 30.0% |
| ! | TCTCTTTTCATTTTGTAGAC+TGG | - | chr5.4:18179897-18179916 | MS.gene070123:intron | 30.0% |
| ! | TTCTCTTTTCGAAATTCTCA+TGG | - | chr5.4:18178988-18179007 | MS.gene070123:CDS | 30.0% |
| ! | TTTTCCTTGTCCTTATTACT+TGG | - | chr5.4:18180338-18180357 | MS.gene070123:intron | 30.0% |
| ! | TTTTGTAGACTGGATGTTTA+GGG | - | chr5.4:18179907-18179926 | MS.gene070123:intron | 30.0% |
| !! | AAATATTTTAAGGGCCAAAC+CGG | + | chr5.4:18180933-18180952 | None:intergenic | 30.0% |
| !! | CAAATTCATTTTTCCCTTTC+AGG | - | chr5.4:18179405-18179424 | MS.gene070123:intron | 30.0% |
| !! | GCTAATATTTCTAGTTTCTG+TGG | + | chr5.4:18178136-18178155 | None:intergenic | 30.0% |
| !! | TGTAGGATTTTTGCTTTGTT+GGG | + | chr5.4:18180492-18180511 | None:intergenic | 30.0% |
| !! | TTGGTTTTCATACTGTACAT+TGG | - | chr5.4:18178613-18178632 | MS.gene070123:CDS | 30.0% |
| !!! | CAGCTTTTGTTTTTTTCTTG+AGG | - | chr5.4:18177736-18177755 | MS.gene070123:CDS | 30.0% |
| AAAAATCAGACCAAACTGGA+TGG | + | chr5.4:18179789-18179808 | None:intergenic | 35.0% | |
| AAAGCAAAAATCCTACACTC+TGG | - | chr5.4:18180495-18180514 | MS.gene070123:intron | 35.0% | |
| AAAGGGTAGTCATTGTAATG+AGG | + | chr5.4:18182490-18182509 | None:intergenic | 35.0% | |
| AACCACCCAGATCATTATAT+TGG | - | chr5.4:18179101-18179120 | MS.gene070123:CDS | 35.0% | |
| AAGAAACAAATGGTATGGAC+AGG | + | chr5.4:18180565-18180584 | None:intergenic | 35.0% | |
| AAGACCATCCAAATTTGCAA+GGG | + | chr5.4:18180669-18180688 | None:intergenic | 35.0% | |
| AAGGGATTGAACAAAAGCAA+TGG | + | chr5.4:18180651-18180670 | None:intergenic | 35.0% | |
| AATAATACTCGGGAGGTAAA+GGG | + | chr5.4:18182507-18182526 | None:intergenic | 35.0% | |
| AATGTAGCTACAACCATGAA+AGG | + | chr5.4:18178683-18178702 | None:intergenic | 35.0% | |
| ACAAAATTTGCAGAGCTTCT+TGG | + | chr5.4:18177109-18177128 | None:intergenic | 35.0% | |
| ACACAAGTATGAAAGGAAGA+AGG | + | chr5.4:18181508-18181527 | None:intergenic | 35.0% | |
| AGAACCTGACCTAAACATAA+AGG | - | chr5.4:18182267-18182286 | MS.gene070123:CDS | 35.0% | |
| AGATAGACTTCAAAATTGGC+TGG | - | chr5.4:18179471-18179490 | MS.gene070123:intron | 35.0% | |
| AGATCATTATATTGGACAGC+AGG | - | chr5.4:18179109-18179128 | MS.gene070123:CDS | 35.0% | |
| AGCTGTTAGATAACTAAGAG+AGG | + | chr5.4:18178737-18178756 | None:intergenic | 35.0% | |
| AGGGATTGAACAAAAGCAAT+GGG | + | chr5.4:18180650-18180669 | None:intergenic | 35.0% | |
| AGTAAGCAACTACAATAGCA+TGG | + | chr5.4:18182163-18182182 | None:intergenic | 35.0% | |
| AGTATGAAAGGAAGAAGGAT+TGG | + | chr5.4:18181503-18181522 | None:intergenic | 35.0% | |
| ATAAAGAAGGTAGCCTTCAT+TGG | + | chr5.4:18181269-18181288 | None:intergenic | 35.0% | |
| ATCATTCGAAGTTGAAGAAG+AGG | - | chr5.4:18182327-18182346 | MS.gene070123:CDS | 35.0% | |
| ATCCACAAAAATCTGTCACA+TGG | + | chr5.4:18181201-18181220 | None:intergenic | 35.0% | |
| ATGTATTGTGCAGATGTCAT+TGG | - | chr5.4:18180373-18180392 | MS.gene070123:intron | 35.0% | |
| ATGTTCCGCCTAAATCTTTA+AGG | - | chr5.4:18178565-18178584 | MS.gene070123:CDS | 35.0% | |
| ATTCCAGTCAATGTATCAAG+TGG | - | chr5.4:18178480-18178499 | MS.gene070123:CDS | 35.0% | |
| CAATAACCAAAACGTGATTC+TGG | - | chr5.4:18178238-18178257 | MS.gene070123:CDS | 35.0% | |
| CCACCACTAATATACCATTT+AGG | + | chr5.4:18177076-18177095 | None:intergenic | 35.0% | |
| CCTAAATGGTATATTAGTGG+TGG | - | chr5.4:18177073-18177092 | MS.gene070123:CDS | 35.0% | |
| CGGACAGTTAAAGAAACAAA+TGG | + | chr5.4:18180575-18180594 | None:intergenic | 35.0% | |
| GAAAATAGCATTTGTGTTGC+AGG | + | chr5.4:18179254-18179273 | None:intergenic | 35.0% | |
| GACATAATCATCAGAACTGA+TGG | + | chr5.4:18180968-18180987 | None:intergenic | 35.0% | |
| GATTCTCAGATTAAAGCCAT+TGG | - | chr5.4:18181331-18181350 | MS.gene070123:intron | 35.0% | |
| GATTCTGGTAGGTAAAAATG+TGG | - | chr5.4:18178253-18178272 | MS.gene070123:CDS | 35.0% | |
| GCAAAGAACACAAGTATGAA+AGG | + | chr5.4:18181515-18181534 | None:intergenic | 35.0% | |
| GCAGAGTTTATTTCCCTAAA+TGG | - | chr5.4:18177059-18177078 | MS.gene070123:CDS | 35.0% | |
| GCTGTCCAATATAATGATCT+GGG | + | chr5.4:18179109-18179128 | None:intergenic | 35.0% | |
| GGGGTAAAATCTGCAATTAA+TGG | + | chr5.4:18178952-18178971 | None:intergenic | 35.0% | |
| GGTTGGATGGTAATAATACT+CGG | + | chr5.4:18182518-18182537 | None:intergenic | 35.0% | |
| GTACAGTATGAAAACCAACT+TGG | + | chr5.4:18178611-18178630 | None:intergenic | 35.0% | |
| GTACTATGACCAACATGTTA+AGG | - | chr5.4:18179959-18179978 | MS.gene070123:intron | 35.0% | |
| GTAGCACAAACTTATCATCA+TGG | + | chr5.4:18178712-18178731 | None:intergenic | 35.0% | |
| GTGTGTTCAATCATAGATCT+TGG | + | chr5.4:18179276-18179295 | None:intergenic | 35.0% | |
| GTTCAAGGAACAATAATGTC+TGG | - | chr5.4:18177616-18177635 | MS.gene070123:intron | 35.0% | |
| GTTCTTTGCCTTTGCATATT+TGG | - | chr5.4:18181526-18181545 | MS.gene070123:intron | 35.0% | |
| GTTGGATGGTAATAATACTC+GGG | + | chr5.4:18182517-18182536 | None:intergenic | 35.0% | |
| TAACATCACATACCTCAACA+GGG | + | chr5.4:18181873-18181892 | None:intergenic | 35.0% | |
| TAATAATACTCGGGAGGTAA+AGG | + | chr5.4:18182508-18182527 | None:intergenic | 35.0% | |
| TACACCATTCTTGATTAGTG+AGG | - | chr5.4:18179141-18179160 | MS.gene070123:intron | 35.0% | |
| TAGTTCACAACATTCCAAGT+TGG | - | chr5.4:18178594-18178613 | MS.gene070123:CDS | 35.0% | |
| TATGCCTTTATGTTTAGGTC+AGG | + | chr5.4:18182274-18182293 | None:intergenic | 35.0% | |
| TCTTTCATTCAACTCACGTT+GGG | - | chr5.4:18180445-18180464 | MS.gene070123:CDS | 35.0% | |
| TGCTGTCCAATATAATGATC+TGG | + | chr5.4:18179110-18179129 | None:intergenic | 35.0% | |
| TGGCATAGAATCAATTCTCA+AGG | + | chr5.4:18178116-18178135 | None:intergenic | 35.0% | |
| TGTTAGATAACTAAGAGAGG+CGG | + | chr5.4:18178734-18178753 | None:intergenic | 35.0% | |
| TGTTCAATCCCTTGCAAATT+TGG | - | chr5.4:18180658-18180677 | MS.gene070123:CDS | 35.0% | |
| TTAACATCACATACCTCAAC+AGG | + | chr5.4:18181874-18181893 | None:intergenic | 35.0% | |
| TTCATCAAGTCCTTTCTACA+AGG | - | chr5.4:18180899-18180918 | MS.gene070123:intron | 35.0% | |
| TTCCAGTCAATGTATCAAGT+GGG | - | chr5.4:18178481-18178500 | MS.gene070123:CDS | 35.0% | |
| TTCCTTGTCCTTATTACTTG+GGG | - | chr5.4:18180340-18180359 | MS.gene070123:intron | 35.0% | |
| TTCTTTCATTCAACTCACGT+TGG | - | chr5.4:18180444-18180463 | MS.gene070123:CDS | 35.0% | |
| TTGAATGAAAGAAAAGCCAC+TGG | + | chr5.4:18180437-18180456 | None:intergenic | 35.0% | |
| TTGATAGGCATAATGAGTAG+GGG | + | chr5.4:18182542-18182561 | None:intergenic | 35.0% | |
| TTTCGTGTGAGCTTAAACTT+TGG | - | chr5.4:18177763-18177782 | MS.gene070123:CDS | 35.0% | |
| ! | ACAATTCTATTACTGGTCTG+AGG | + | chr5.4:18180709-18180728 | None:intergenic | 35.0% |
| ! | AGAAGCTCTGCAAATTTTGT+TGG | - | chr5.4:18177109-18177128 | MS.gene070123:CDS | 35.0% |
| ! | ATGCTGGTGAATGTTTTCTT+GGG | - | chr5.4:18181055-18181074 | MS.gene070123:CDS | 35.0% |
| ! | CATTGACTGGAATAAGAATG+AGG | + | chr5.4:18178473-18178492 | None:intergenic | 35.0% |
| ! | GTGTAGGATTTTTGCTTTGT+TGG | + | chr5.4:18180493-18180512 | None:intergenic | 35.0% |
| ! | TATGCTGGTGAATGTTTTCT+TGG | - | chr5.4:18181054-18181073 | MS.gene070123:CDS | 35.0% |
| ! | TCCTAAATCTATTTTGCCAG+TGG | - | chr5.4:18180418-18180437 | MS.gene070123:CDS | 35.0% |
| ! | TTCTTGGGAAGCATAATAAC+TGG | - | chr5.4:18181070-18181089 | MS.gene070123:CDS | 35.0% |
| ! | TTTCTACAAGGTTTTCTTCC+CGG | - | chr5.4:18180911-18180930 | MS.gene070123:intron | 35.0% |
| !! | AATATTTTAAGGGCCAAACC+GGG | + | chr5.4:18180932-18180951 | None:intergenic | 35.0% |
| !! | CGGTCCAATTTCTAAAACAT+TGG | + | chr5.4:18179563-18179582 | None:intergenic | 35.0% |
| !! | GATTTGTTTTCTGCTCTACA+AGG | - | chr5.4:18178817-18178836 | MS.gene070123:CDS | 35.0% |
| !! | TTACATAATGGTTGATGGCT+GGG | - | chr5.4:18181292-18181311 | MS.gene070123:intron | 35.0% |
| !!! | GTTTCTAGCTTTTCCTTTCA+TGG | - | chr5.4:18178667-18178686 | MS.gene070123:intron | 35.0% |
| !!! | TCTCGGTTTTAACTATGAAC+AGG | + | chr5.4:18181376-18181395 | None:intergenic | 35.0% |
| AAAATTGGCTGGACTACTAC+CGG | - | chr5.4:18179482-18179501 | MS.gene070123:intron | 40.0% | |
| AACCAAAACGTGATTCTGGT+AGG | - | chr5.4:18178242-18178261 | MS.gene070123:CDS | 40.0% | |
| AAGAGGGAATCAGTTTGGAA+AGG | - | chr5.4:18182129-18182148 | MS.gene070123:intron | 40.0% | |
| AATTGGACCGAATATCGAAC+TGG | - | chr5.4:18179573-18179592 | MS.gene070123:CDS | 40.0% | |
| AGAGGGAATCAGTTTGGAAA+GGG | - | chr5.4:18182130-18182149 | MS.gene070123:intron | 40.0% | |
| AGCAATGGCTAAGGATATAC+TGG | - | chr5.4:18182234-18182253 | MS.gene070123:intron | 40.0% | |
| AGCACTCCTCTTCTAACATA+AGG | + | chr5.4:18178315-18178334 | None:intergenic | 40.0% | |
| ATGGCAACTCTTCAAGACAT+TGG | - | chr5.4:18176956-18176975 | MS.gene070123:CDS | 40.0% | |
| CAAGACCATCCAAATTTGCA+AGG | + | chr5.4:18180670-18180689 | None:intergenic | 40.0% | |
| CAAGCCAAACAGAAGAATCT+GGG | + | chr5.4:18181737-18181756 | None:intergenic | 40.0% | |
| CAATCCCTTGCAAATTTGGA+TGG | - | chr5.4:18180662-18180681 | MS.gene070123:CDS | 40.0% | |
| CACAAAAATCTGTCACATGG+AGG | + | chr5.4:18181198-18181217 | None:intergenic | 40.0% | |
| CAGACCTCACTAATCAAGAA+TGG | + | chr5.4:18179148-18179167 | None:intergenic | 40.0% | |
| CCTTTGTGTCATGGTTCAAT+CGG | - | chr5.4:18179601-18179620 | MS.gene070123:CDS | 40.0% | |
| CGATTGAACCATGACACAAA+GGG | + | chr5.4:18179603-18179622 | None:intergenic | 40.0% | |
| CTATCCCAGATTCTTCTGTT+TGG | - | chr5.4:18181730-18181749 | MS.gene070123:intron | 40.0% | |
| GACTAGCAACATGATGAGTT+TGG | + | chr5.4:18182396-18182415 | None:intergenic | 40.0% | |
| GATGCTTCTGATACTTGATC+CGG | + | chr5.4:18179504-18179523 | None:intergenic | 40.0% | |
| GCCACTGGCAAAATAGATTT+AGG | + | chr5.4:18180422-18180441 | None:intergenic | 40.0% | |
| GGAACTGGTTGAACTAGAAA+CGG | - | chr5.4:18182348-18182367 | MS.gene070123:CDS | 40.0% | |
| GGGAAGAAAACCTTGTAGAA+AGG | + | chr5.4:18180912-18180931 | None:intergenic | 40.0% | |
| GTATTAAGCTTGCGATGATG+CGG | + | chr5.4:18181711-18181730 | None:intergenic | 40.0% | |
| GTCCAATATAATGATCTGGG+TGG | + | chr5.4:18179106-18179125 | None:intergenic | 40.0% | |
| GTTGAACTTGAACCTAATGC+TGG | - | chr5.4:18179700-18179719 | MS.gene070123:intron | 40.0% | |
| GTTTATTCCGGTGACAATTG+TGG | - | chr5.4:18178443-18178462 | MS.gene070123:CDS | 40.0% | |
| TACACTCTGGTTGACTGATT+GGG | - | chr5.4:18180508-18180527 | MS.gene070123:intron | 40.0% | |
| TATGTTTAGGTCAGGTTCTG+TGG | + | chr5.4:18182266-18182285 | None:intergenic | 40.0% | |
| TATTCAGGAAGCAATGGCTA+AGG | - | chr5.4:18182225-18182244 | MS.gene070123:intron | 40.0% | |
| TCAACTAGGACCAAACCAAT+CGG | - | chr5.4:18179739-18179758 | MS.gene070123:intron | 40.0% | |
| TCACGACCAATTCTCTTCTT+AGG | + | chr5.4:18178518-18178537 | None:intergenic | 40.0% | |
| TCACTCATTCTCAAAGCTTG+AGG | + | chr5.4:18177187-18177206 | None:intergenic | 40.0% | |
| TCCTTGTCCTTATTACTTGG+GGG | - | chr5.4:18180341-18180360 | MS.gene070123:intron | 40.0% | |
| TTAGCCATTGCTTCCTGAAT+AGG | + | chr5.4:18182226-18182245 | None:intergenic | 40.0% | |
| TTGAAGACTCGGAAGAGTTT+CGG | + | chr5.4:18181441-18181460 | None:intergenic | 40.0% | |
| TTGACCTATTCAGGAAGCAA+TGG | - | chr5.4:18182219-18182238 | MS.gene070123:intron | 40.0% | |
| TTGCATTATCAACACTCGAG+CGG | - | chr5.4:18181005-18181024 | MS.gene070123:CDS | 40.0% | |
| TTTCGCCAATATATGTCACG+TGG | + | chr5.4:18180542-18180561 | None:intergenic | 40.0% | |
| TTTGTGTTGCAGGACAAAAG+TGG | + | chr5.4:18179244-18179263 | None:intergenic | 40.0% | |
| ! | ATAGAATTGACTTCGGGACT+AGG | - | chr5.4:18178162-18178181 | MS.gene070123:CDS | 40.0% |
| ! | ATGGTTTTCATGATTGCTGC+AGG | - | chr5.4:18179007-18179026 | MS.gene070123:CDS | 40.0% |
| ! | CAAAGTACCCCCAAGTAATA+AGG | + | chr5.4:18180351-18180370 | None:intergenic | 40.0% |
| ! | CTCCATGTGACAGATTTTTG+TGG | - | chr5.4:18181196-18181215 | MS.gene070123:intron | 40.0% |
| ! | TACCTACCAGAATCACGTTT+TGG | + | chr5.4:18178247-18178266 | None:intergenic | 40.0% |
| ! | TCTATTACTGGTCTGAGGAA+AGG | + | chr5.4:18180704-18180723 | None:intergenic | 40.0% |
| !! | ACTTTGGTGTTTGTTCCATG+TGG | - | chr5.4:18177779-18177798 | MS.gene070123:CDS | 40.0% |
| !! | ATTTAGGAAGTACCCTGTTG+AGG | - | chr5.4:18181858-18181877 | MS.gene070123:intron | 40.0% |
| !! | CTTACATAATGGTTGATGGC+TGG | - | chr5.4:18181291-18181310 | MS.gene070123:intron | 40.0% |
| !! | CTTTGGTGTTTGTTCCATGT+GGG | - | chr5.4:18177780-18177799 | MS.gene070123:CDS | 40.0% |
| !! | GATCAAGTATCAGAAGCATC+CGG | - | chr5.4:18179504-18179523 | MS.gene070123:intron | 40.0% |
| !! | TGGCTTGCTTAGCACAAAAA+AGG | - | chr5.4:18181750-18181769 | MS.gene070123:intron | 40.0% |
| !! | TTTGGTGTTTGTTCCATGTG+GGG | - | chr5.4:18177781-18177800 | MS.gene070123:CDS | 40.0% |
| !!! | AGACTGTTTTGGAGAGCTTA+TGG | - | chr5.4:18180083-18180102 | MS.gene070123:CDS | 40.0% |
| AAATACAGCTACACCCCACA+TGG | + | chr5.4:18177797-18177816 | None:intergenic | 45.0% | |
| AACTAGACTGCGGTTCAACT+AGG | - | chr5.4:18179725-18179744 | MS.gene070123:intron | 45.0% | |
| AATGCTGGTCAACTAGACTG+CGG | - | chr5.4:18179715-18179734 | MS.gene070123:intron | 45.0% | |
| ACCAAACTGGATGGATCAAC+TGG | + | chr5.4:18179780-18179799 | None:intergenic | 45.0% | |
| ACCCCCAAGTAATAAGGACA+AGG | + | chr5.4:18180345-18180364 | None:intergenic | 45.0% | |
| AGGAATGTCCCTCGTATTTC+TGG | - | chr5.4:18179038-18179057 | MS.gene070123:CDS | 45.0% | |
| AGTCCAATATTGAGTGAGCC+TGG | - | chr5.4:18182412-18182431 | MS.gene070123:CDS | 45.0% | |
| ATAATCAACGCCTGCTGAAG+AGG | - | chr5.4:18182112-18182131 | MS.gene070123:intron | 45.0% | |
| ATAGGCATAATGAGTAGGGG+AGG | + | chr5.4:18182539-18182558 | None:intergenic | 45.0% | |
| ATCAACACTCGAGCGGAAAA+CGG | - | chr5.4:18181012-18181031 | MS.gene070123:CDS | 45.0% | |
| CAATATATGTCACGTGGCTC+TGG | + | chr5.4:18180536-18180555 | None:intergenic | 45.0% | |
| CAATCAGTCAACCAGAGTGT+AGG | + | chr5.4:18180509-18180528 | None:intergenic | 45.0% | |
| CAGAGCCACGTGACATATAT+TGG | - | chr5.4:18180534-18180553 | MS.gene070123:intron | 45.0% | |
| CAGCATACACAACACCAAGA+AGG | + | chr5.4:18181472-18181491 | None:intergenic | 45.0% | |
| CAGCGCTTTCATATCGTTGA+TGG | + | chr5.4:18181663-18181682 | None:intergenic | 45.0% | |
| CAGGCGTGTAGAGCAATTTA+CGG | - | chr5.4:18178889-18178908 | MS.gene070123:CDS | 45.0% | |
| CAGTCTAGTTGACCAGCATT+AGG | + | chr5.4:18179715-18179734 | None:intergenic | 45.0% | |
| CCAAACTGGATGGATCAACT+GGG | + | chr5.4:18179779-18179798 | None:intergenic | 45.0% | |
| CCGATTGAACCATGACACAA+AGG | + | chr5.4:18179604-18179623 | None:intergenic | 45.0% | |
| CGAAGTTGAAGAAGAGGAAC+TGG | - | chr5.4:18182333-18182352 | MS.gene070123:CDS | 45.0% | |
| CTACACTCTGGTTGACTGAT+TGG | - | chr5.4:18180507-18180526 | MS.gene070123:intron | 45.0% | |
| GAACCAGGCTCACTCAATAT+TGG | + | chr5.4:18182418-18182437 | None:intergenic | 45.0% | |
| GAAGGTAGCCTTCATTGGAA+TGG | + | chr5.4:18181264-18181283 | None:intergenic | 45.0% | |
| GAGAGAACACCATCAGATTC+TGG | + | chr5.4:18179881-18179900 | None:intergenic | 45.0% | |
| GCAAGCCAAACAGAAGAATC+TGG | + | chr5.4:18181738-18181757 | None:intergenic | 45.0% | |
| GCATTGTAGACAGCCTGAAA+GGG | + | chr5.4:18179421-18179440 | None:intergenic | 45.0% | |
| GGATGGTAATAATACTCGGG+AGG | + | chr5.4:18182514-18182533 | None:intergenic | 45.0% | |
| GGGTAGTCATTGTAATGAGG+CGG | + | chr5.4:18182487-18182506 | None:intergenic | 45.0% | |
| GTCCCACTTGATACATTGAC+TGG | + | chr5.4:18178486-18178505 | None:intergenic | 45.0% | |
| GTTAAAACCGAGAGAGATCG+AGG | - | chr5.4:18181383-18181402 | MS.gene070123:intron | 45.0% | |
| TAATCAACGCCTGCTGAAGA+GGG | - | chr5.4:18182113-18182132 | MS.gene070123:intron | 45.0% | |
| TCACTCGGTATCAGATAGTG+TGG | - | chr5.4:18179061-18179080 | MS.gene070123:CDS | 45.0% | |
| TCATTGTAATGAGGCGGTGA+AGG | + | chr5.4:18182481-18182500 | None:intergenic | 45.0% | |
| TGAAGACTCGGAAGAGTTTC+GGG | + | chr5.4:18181440-18181459 | None:intergenic | 45.0% | |
| TGCATTGTAGACAGCCTGAA+AGG | + | chr5.4:18179422-18179441 | None:intergenic | 45.0% | |
| TGCTGAAGAGGGAATCAGTT+TGG | - | chr5.4:18182124-18182143 | MS.gene070123:intron | 45.0% | |
| TGGAGGCAACCGAAAAAACA+TGG | + | chr5.4:18181181-18181200 | None:intergenic | 45.0% | |
| ! | AAACTGATTCCCTCTTCAGC+AGG | + | chr5.4:18182125-18182144 | None:intergenic | 45.0% |
| ! | ACAAGGTTTTCTTCCCGGTT+TGG | - | chr5.4:18180916-18180935 | MS.gene070123:intron | 45.0% |
| ! | ACAGGGTACTTCCTAAATGC+TGG | + | chr5.4:18181856-18181875 | None:intergenic | 45.0% |
| ! | ACTGGATGTTTAGGGCTTTG+GGG | - | chr5.4:18179915-18179934 | MS.gene070123:intron | 45.0% |
| ! | AGACTGGATGTTTAGGGCTT+TGG | - | chr5.4:18179913-18179932 | MS.gene070123:intron | 45.0% |
| ! | GACTGGATGTTTAGGGCTTT+GGG | - | chr5.4:18179914-18179933 | MS.gene070123:intron | 45.0% |
| ! | TGTTGATGGACATGATGTGG+TGG | + | chr5.4:18182448-18182467 | None:intergenic | 45.0% |
| !! | AAGGTTGATGCTGGTGTTGA+TGG | + | chr5.4:18182462-18182481 | None:intergenic | 45.0% |
| !! | ATCAGAAGCATCCGGATACA+AGG | - | chr5.4:18179512-18179531 | MS.gene070123:intron | 45.0% |
| !! | GTCGTTTTGAGCCAGCATTT+AGG | - | chr5.4:18181842-18181861 | MS.gene070123:intron | 45.0% |
| !! | TGGTGTTGATGGACATGATG+TGG | + | chr5.4:18182451-18182470 | None:intergenic | 45.0% |
| !! | TTGACAGTTGGCCTTGTATC+CGG | + | chr5.4:18179526-18179545 | None:intergenic | 45.0% |
| !!! | ATGAAAGCGCTGCTGCATTT+TGG | - | chr5.4:18181671-18181690 | MS.gene070123:intron | 45.0% |
| !! | TAAAATAATTTCAAAATTAA+AGG | + | chr5.4:18178369-18178388 | None:intergenic | 5.0% |
| !!! | AATAATTTTTTTTTCAATTA+TGG | + | chr5.4:18177517-18177536 | None:intergenic | 5.0% |
| !!! | GAATATATAAAAATATTTTA+AGG | + | chr5.4:18180943-18180962 | None:intergenic | 5.0% |
| AACCGAGAGAGATCGAGGAA+AGG | - | chr5.4:18181388-18181407 | MS.gene070123:intron | 50.0% | |
| AATGAGTAGGGGAGGTTGGA+TGG | + | chr5.4:18182531-18182550 | None:intergenic | 50.0% | |
| ACCGAGTGACCAGAAATACG+AGG | + | chr5.4:18179050-18179069 | None:intergenic | 50.0% | |
| ATGAGGAGTTAGACCCTGTC+TGG | + | chr5.4:18180277-18180296 | None:intergenic | 50.0% | |
| ATGATGCGGCTGTGAACTTG+TGG | + | chr5.4:18181697-18181716 | None:intergenic | 50.0% | |
| CCCAGTTGATCCATCCAGTT+TGG | - | chr5.4:18179776-18179795 | MS.gene070123:intron | 50.0% | |
| CCGAGTGACCAGAAATACGA+GGG | + | chr5.4:18179049-18179068 | None:intergenic | 50.0% | |
| GAACAGGCAAGTTTGCCGAT+TGG | + | chr5.4:18179757-18179776 | None:intergenic | 50.0% | |
| GATTGCTGCAGGTAGTTGTC+AGG | - | chr5.4:18179018-18179037 | MS.gene070123:CDS | 50.0% | |
| GCATAATGAGTAGGGGAGGT+TGG | + | chr5.4:18182535-18182554 | None:intergenic | 50.0% | |
| GGATACAAGGCCAACTGTCA+AGG | - | chr5.4:18179525-18179544 | MS.gene070123:intron | 50.0% | |
| GGGCTCACCAGTTCGATATT+CGG | + | chr5.4:18179583-18179602 | None:intergenic | 50.0% | |
| TGGATGGATCAACTGGGAAC+AGG | + | chr5.4:18179773-18179792 | None:intergenic | 50.0% | |
| ! | AACGTTGTCGGTGTTTGCCT+TGG | - | chr5.4:18180607-18180626 | MS.gene070123:intron | 50.0% |
| ! | GGCAAGTTTGCCGATTGGTT+TGG | + | chr5.4:18179752-18179771 | None:intergenic | 50.0% |
| ! | TGGACATGATGTGGTGGTGA+AGG | + | chr5.4:18182442-18182461 | None:intergenic | 50.0% |
| ! | TGGTTCAATCGGCTTAGCCA+CGG | - | chr5.4:18179612-18179631 | MS.gene070123:intron | 50.0% |
| !! | AGGAGTGCCACAATTGTCAC+CGG | + | chr5.4:18178453-18178472 | None:intergenic | 50.0% |
| !! | ATAATGGTTGATGGCTGGGC+TGG | - | chr5.4:18181296-18181315 | MS.gene070123:intron | 50.0% |
| !! | CCCTCGTATTTCTGGTCACT+CGG | - | chr5.4:18179046-18179065 | MS.gene070123:CDS | 50.0% |
| !! | GATGTTTAGGGCTTTGGGGT+AGG | - | chr5.4:18179919-18179938 | MS.gene070123:intron | 50.0% |
| ATCCACACTCCCTGGATCCA+TGG | + | chr5.4:18181414-18181433 | None:intergenic | 55.0% | |
| ATTTCTTGGCCTCACAGCGC+AGG | - | chr5.4:18178870-18178889 | MS.gene070123:CDS | 55.0% | |
| CTGGTGAGCCCTTTGTGTCA+TGG | - | chr5.4:18179592-18179611 | MS.gene070123:CDS | 55.0% | |
| GAGAGATCGAGGAAAGGCCA+TGG | - | chr5.4:18181394-18181413 | MS.gene070123:intron | 55.0% | |
| GAGGAAAGGCCATGGATCCA+GGG | - | chr5.4:18181402-18181421 | MS.gene070123:intron | 55.0% | |
| GGCCTTTCCTCGATCTCTCT+CGG | + | chr5.4:18181393-18181412 | None:intergenic | 55.0% | |
| TCGGGAAAATCCACACTCCC+TGG | + | chr5.4:18181422-18181441 | None:intergenic | 55.0% | |
| ! | TGTGGTGGTGAAGGTGAACC+AGG | + | chr5.4:18182433-18182452 | None:intergenic | 55.0% |
| CGAGGAAAGGCCATGGATCC+AGG | - | chr5.4:18181401-18181420 | MS.gene070123:intron | 60.0% | |
| ! | GATGGCTGGGCTGGAATTGC+TGG | - | chr5.4:18181305-18181324 | MS.gene070123:intron | 60.0% |
| !! | GAGGCGGTGAAGGTTGATGC+TGG | + | chr5.4:18182471-18182490 | None:intergenic | 60.0% |
| CTCTACACGCCTGCGCTGTG+AGG | + | chr5.4:18178882-18178901 | None:intergenic | 65.0% | |
| GGCCATGGATCCAGGGAGTG+TGG | - | chr5.4:18181409-18181428 | MS.gene070123:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 18176956 | 18182579 | 18176956 | ID=MS.gene070123 |
| chr5.4 | mRNA | 18176956 | 18182579 | 18176956 | ID=MS.gene070123.t1;Parent=MS.gene070123 |
| chr5.4 | exon | 18182266 | 18182579 | 18182266 | ID=MS.gene070123.t1.exon1;Parent=MS.gene070123.t1 |
| chr5.4 | CDS | 18182266 | 18182579 | 18182266 | ID=cds.MS.gene070123.t1;Parent=MS.gene070123.t1 |
| chr5.4 | exon | 18180949 | 18181101 | 18180949 | ID=MS.gene070123.t1.exon2;Parent=MS.gene070123.t1 |
| chr5.4 | CDS | 18180949 | 18181101 | 18180949 | ID=cds.MS.gene070123.t1;Parent=MS.gene070123.t1 |
| chr5.4 | exon | 18180625 | 18180760 | 18180625 | ID=MS.gene070123.t1.exon3;Parent=MS.gene070123.t1 |
| chr5.4 | CDS | 18180625 | 18180760 | 18180625 | ID=cds.MS.gene070123.t1;Parent=MS.gene070123.t1 |
| chr5.4 | exon | 18180405 | 18180506 | 18180405 | ID=MS.gene070123.t1.exon4;Parent=MS.gene070123.t1 |
| chr5.4 | CDS | 18180405 | 18180506 | 18180405 | ID=cds.MS.gene070123.t1;Parent=MS.gene070123.t1 |
| chr5.4 | exon | 18179989 | 18180108 | 18179989 | ID=MS.gene070123.t1.exon5;Parent=MS.gene070123.t1 |
| chr5.4 | CDS | 18179989 | 18180108 | 18179989 | ID=cds.MS.gene070123.t1;Parent=MS.gene070123.t1 |
| chr5.4 | exon | 18179540 | 18179620 | 18179540 | ID=MS.gene070123.t1.exon6;Parent=MS.gene070123.t1 |
| chr5.4 | CDS | 18179540 | 18179620 | 18179540 | ID=cds.MS.gene070123.t1;Parent=MS.gene070123.t1 |
| chr5.4 | exon | 18178809 | 18179149 | 18178809 | ID=MS.gene070123.t1.exon7;Parent=MS.gene070123.t1 |
| chr5.4 | CDS | 18178809 | 18179149 | 18178809 | ID=cds.MS.gene070123.t1;Parent=MS.gene070123.t1 |
| chr5.4 | exon | 18178395 | 18178640 | 18178395 | ID=MS.gene070123.t1.exon8;Parent=MS.gene070123.t1 |
| chr5.4 | CDS | 18178395 | 18178640 | 18178395 | ID=cds.MS.gene070123.t1;Parent=MS.gene070123.t1 |
| chr5.4 | exon | 18177973 | 18178297 | 18177973 | ID=MS.gene070123.t1.exon9;Parent=MS.gene070123.t1 |
| chr5.4 | CDS | 18177973 | 18178297 | 18177973 | ID=cds.MS.gene070123.t1;Parent=MS.gene070123.t1 |
| chr5.4 | exon | 18177656 | 18177889 | 18177656 | ID=MS.gene070123.t1.exon10;Parent=MS.gene070123.t1 |
| chr5.4 | CDS | 18177656 | 18177889 | 18177656 | ID=cds.MS.gene070123.t1;Parent=MS.gene070123.t1 |
| chr5.4 | exon | 18176956 | 18177303 | 18176956 | ID=MS.gene070123.t1.exon11;Parent=MS.gene070123.t1 |
| chr5.4 | CDS | 18176956 | 18177303 | 18176956 | ID=cds.MS.gene070123.t1;Parent=MS.gene070123.t1 |
| Gene Sequence |
| Protein sequence |
