Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07019.t1 | XP_003625933.2 | 91.7 | 635 | 2 | 1 | 1 | 584 | 1 | 635 | 0.00E+00 | 1107.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07019.t1 | A2XL32 | 70.8 | 592 | 122 | 1 | 2 | 542 | 1 | 592 | 9.1e-232 | 804.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07019.t1 | G7KSQ0 | 91.7 | 635 | 2 | 1 | 1 | 584 | 1 | 635 | 0.0e+00 | 1107.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene57306 | MS.gene07019 | PPI |
| MS.gene061793 | MS.gene07019 | PPI |
| MS.gene045131 | MS.gene07019 | PPI |
| MS.gene052190 | MS.gene07019 | PPI |
| MS.gene91939 | MS.gene07019 | PPI |
| MS.gene91938 | MS.gene07019 | PPI |
| MS.gene032807 | MS.gene07019 | PPI |
| MS.gene49566 | MS.gene07019 | PPI |
| MS.gene75490 | MS.gene07019 | PPI |
| MS.gene28063 | MS.gene07019 | PPI |
| MS.gene030824 | MS.gene07019 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07019.t1 | MTR_7g109150 | 91.654 | 635 | 2 | 1 | 1 | 584 | 1 | 635 | 0.0 | 1180 |
| MS.gene07019.t1 | MTR_4g031150 | 66.774 | 623 | 156 | 1 | 1 | 572 | 50 | 672 | 0.0 | 835 |
| MS.gene07019.t1 | MTR_1g073840 | 38.737 | 586 | 296 | 11 | 5 | 535 | 29 | 606 | 2.97e-116 | 363 |
| MS.gene07019.t1 | MTR_1g044210 | 36.555 | 569 | 297 | 12 | 5 | 516 | 28 | 589 | 2.64e-102 | 326 |
| MS.gene07019.t1 | MTR_7g116330 | 34.572 | 619 | 312 | 15 | 5 | 547 | 34 | 635 | 5.63e-98 | 315 |
| MS.gene07019.t1 | MTR_1g079790 | 34.810 | 632 | 336 | 15 | 3 | 572 | 26 | 643 | 1.71e-96 | 311 |
| MS.gene07019.t1 | MTR_1g079790 | 34.982 | 566 | 305 | 11 | 3 | 510 | 26 | 586 | 2.33e-91 | 294 |
| MS.gene07019.t1 | MTR_5g022470 | 33.333 | 258 | 146 | 4 | 283 | 516 | 499 | 754 | 2.92e-35 | 142 |
| MS.gene07019.t1 | MTR_5g022470 | 33.333 | 258 | 146 | 4 | 283 | 516 | 499 | 754 | 3.21e-35 | 142 |
| MS.gene07019.t1 | MTR_3g105590 | 30.252 | 357 | 192 | 13 | 243 | 545 | 310 | 663 | 1.75e-33 | 137 |
| MS.gene07019.t1 | MTR_8g080770 | 30.357 | 280 | 162 | 4 | 284 | 531 | 274 | 552 | 9.73e-33 | 134 |
| MS.gene07019.t1 | MTR_8g080770 | 30.357 | 280 | 162 | 4 | 284 | 531 | 383 | 661 | 1.11e-32 | 134 |
| MS.gene07019.t1 | MTR_8g075340 | 31.641 | 256 | 153 | 3 | 283 | 516 | 461 | 716 | 1.81e-32 | 134 |
| MS.gene07019.t1 | MTR_3g085130 | 28.716 | 296 | 173 | 5 | 284 | 542 | 228 | 522 | 4.44e-32 | 132 |
| MS.gene07019.t1 | MTR_3g085130 | 27.961 | 304 | 179 | 5 | 284 | 551 | 438 | 737 | 4.89e-32 | 132 |
| MS.gene07019.t1 | MTR_8g106150 | 31.148 | 305 | 155 | 6 | 287 | 537 | 134 | 437 | 9.70e-30 | 125 |
| MS.gene07019.t1 | MTR_8g106150 | 31.148 | 305 | 155 | 6 | 287 | 537 | 377 | 680 | 1.41e-29 | 125 |
| MS.gene07019.t1 | MTR_5g097410 | 30.389 | 283 | 158 | 5 | 287 | 531 | 611 | 892 | 2.46e-29 | 124 |
| MS.gene07019.t1 | MTR_1g013360 | 30.348 | 201 | 127 | 6 | 243 | 432 | 316 | 514 | 8.73e-21 | 97.4 |
| MS.gene07019.t1 | MTR_1g013360 | 38.393 | 112 | 64 | 3 | 433 | 541 | 585 | 694 | 1.02e-11 | 68.6 |
| MS.gene07019.t1 | MTR_1g087140 | 28.939 | 311 | 170 | 12 | 273 | 540 | 373 | 675 | 7.13e-19 | 91.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07019.t1 | AT2G40940 | 69.950 | 599 | 129 | 1 | 2 | 549 | 1 | 599 | 0.0 | 825 |
| MS.gene07019.t1 | AT1G66340 | 64.469 | 622 | 166 | 2 | 2 | 572 | 1 | 618 | 0.0 | 786 |
| MS.gene07019.t1 | AT3G23150 | 37.610 | 569 | 283 | 13 | 5 | 511 | 32 | 590 | 5.81e-103 | 323 |
| MS.gene07019.t1 | AT3G23150 | 37.805 | 574 | 285 | 13 | 5 | 516 | 32 | 595 | 3.11e-102 | 327 |
| MS.gene07019.t1 | AT3G04580 | 33.333 | 633 | 350 | 13 | 4 | 572 | 26 | 650 | 4.05e-92 | 300 |
| MS.gene07019.t1 | AT3G04580 | 33.333 | 633 | 350 | 13 | 4 | 572 | 26 | 650 | 4.05e-92 | 300 |
| MS.gene07019.t1 | AT1G04310 | 33.723 | 513 | 266 | 11 | 5 | 446 | 34 | 543 | 1.43e-71 | 242 |
| MS.gene07019.t1 | AT1G04310 | 33.723 | 513 | 266 | 11 | 5 | 446 | 34 | 543 | 1.43e-71 | 242 |
| MS.gene07019.t1 | AT5G10720 | 32.500 | 320 | 186 | 8 | 272 | 568 | 339 | 651 | 2.04e-38 | 152 |
| MS.gene07019.t1 | AT1G27320 | 30.421 | 309 | 184 | 4 | 253 | 531 | 410 | 717 | 3.09e-35 | 142 |
| MS.gene07019.t1 | AT2G17820 | 32.246 | 276 | 161 | 5 | 263 | 516 | 472 | 743 | 3.59e-35 | 142 |
| MS.gene07019.t1 | AT5G35750 | 27.701 | 361 | 217 | 9 | 219 | 542 | 516 | 869 | 7.79e-32 | 132 |
| MS.gene07019.t1 | AT2G01830 | 29.545 | 308 | 165 | 5 | 287 | 546 | 443 | 746 | 3.37e-30 | 127 |
| MS.gene07019.t1 | AT2G01830 | 29.545 | 308 | 165 | 5 | 287 | 546 | 443 | 746 | 3.37e-30 | 127 |
| MS.gene07019.t1 | AT2G01830 | 29.545 | 308 | 165 | 5 | 287 | 546 | 443 | 746 | 3.37e-30 | 127 |
| MS.gene07019.t1 | AT2G01830 | 29.545 | 308 | 165 | 5 | 287 | 546 | 443 | 746 | 3.37e-30 | 127 |
| MS.gene07019.t1 | AT2G01830 | 29.545 | 308 | 165 | 5 | 287 | 546 | 455 | 758 | 3.49e-30 | 127 |
| MS.gene07019.t1 | AT2G01830 | 29.545 | 308 | 165 | 5 | 287 | 546 | 466 | 769 | 3.77e-30 | 127 |
| MS.gene07019.t1 | AT2G47430 | 27.491 | 291 | 167 | 10 | 283 | 535 | 385 | 669 | 1.31e-16 | 84.3 |
| MS.gene07019.t1 | AT4G16250 | 23.984 | 246 | 160 | 8 | 275 | 516 | 914 | 1136 | 8.10e-12 | 68.9 |
Find 133 sgRNAs with CRISPR-Local
Find 264 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTTTCACATGCTGCTATTT+TGG | 0.127774 | 7.3:+5847427 | MS.gene07019:CDS |
| TTTGTGCAGGTTAAGGATTC+TGG | 0.190806 | 7.3:+5848376 | MS.gene07019:intron |
| AATCAACCTTCATGGTGTTT+TGG | 0.215357 | 7.3:+5847757 | MS.gene07019:CDS |
| CTGCTTTCTTTCCATATAGA+TGG | 0.223591 | 7.3:+5845605 | MS.gene07019:CDS |
| GTGGAGTTGGGTAGGACTTT+AGG | 0.238818 | 7.3:+5845970 | MS.gene07019:CDS |
| GATGGGTTCTTATGCAGTTT+GGG | 0.252158 | 7.3:+5845623 | MS.gene07019:CDS |
| AGCATTGTCATCACTTCTTT+TGG | 0.253771 | 7.3:+5847598 | MS.gene07019:CDS |
| CGCCAATCCTGTAAGGATTC+TGG | 0.273695 | 7.3:-5848066 | None:intergenic |
| TTGGACTAGCTATTTGTAAA+AGG | 0.274567 | 7.3:+5848491 | MS.gene07019:CDS |
| GCTCTTCCGCCTTGTTCTTA+AGG | 0.299367 | 7.3:-5845831 | None:intergenic |
| AGATGGGTTCTTATGCAGTT+TGG | 0.302430 | 7.3:+5845622 | MS.gene07019:CDS |
| ACAAGGCGGAAGAGCTTGAT+AGG | 0.308682 | 7.3:+5845839 | MS.gene07019:CDS |
| TGCAAAACCAGAATCCTTAC+AGG | 0.315260 | 7.3:+5848059 | MS.gene07019:CDS |
| TTAAAGTATGAGAAAGTTGT+AGG | 0.315493 | 7.3:-5846038 | None:intergenic |
| TGCATAAGAACCCATCTATA+TGG | 0.316824 | 7.3:-5845616 | None:intergenic |
| CAACATTCTCACATGTCTTC+CGG | 0.319637 | 7.3:-5845893 | None:intergenic |
| ATCTCATGGGTGGGCACATA+TGG | 0.329280 | 7.3:+5848656 | MS.gene07019:CDS |
| CACCTGAAGTTGTTGCGGTT+CGG | 0.344532 | 7.3:+5846199 | MS.gene07019:CDS |
| TCTAGCAGTGGTTCAGGTCT+TGG | 0.350863 | 7.3:+5848472 | MS.gene07019:CDS |
| ATTGAAGAGTAGTAATGTTT+TGG | 0.359573 | 7.3:+5847664 | MS.gene07019:CDS |
| CTGAAGACTTCATTGACAAT+AGG | 0.366052 | 7.3:-5846102 | None:intergenic |
| GAATGTTGACTCATGAAATT+AGG | 0.375510 | 7.3:+5845908 | MS.gene07019:CDS |
| GAGAGCGAGGGTCACGATAA+AGG | 0.377013 | 7.3:+5848682 | MS.gene07019:CDS |
| ACCTGAAGTTGTTGCGGTTC+GGG | 0.378789 | 7.3:+5846200 | MS.gene07019:CDS |
| CTCTCGCCGAGCTAAATCTA+AGG | 0.393829 | 7.3:-5847495 | None:intergenic |
| ATGGCATGAGTAGGTAGATC+AGG | 0.413426 | 7.3:-5847940 | None:intergenic |
| GTTCGATCTAGCAGTGGTTC+AGG | 0.425531 | 7.3:+5848466 | MS.gene07019:CDS |
| CTCCACTTCCACTATATGCT+TGG | 0.434484 | 7.3:-5848783 | None:intergenic |
| AAATTAGGAGCACTCTTGAT+AGG | 0.435699 | 7.3:+5845923 | MS.gene07019:CDS |
| GGGGCAAGAATTAAAGTAAT+GGG | 0.436802 | 7.3:-5847919 | None:intergenic |
| GAGTTGATCCCGGGCTCGCA+TGG | 0.439303 | 7.3:-5847456 | None:intergenic |
| TACTTGACAAGAAGTTCATC+TGG | 0.439756 | 7.3:-5845505 | None:intergenic |
| AGCTCGGCGAGAGGCTGAAA+TGG | 0.447274 | 7.3:+5847505 | MS.gene07019:CDS |
| AGGTTCAAACCACTTCTTGA+TGG | 0.447911 | 7.3:-5846018 | None:intergenic |
| GCTACATTTGTAGTCAAACT+TGG | 0.452125 | 7.3:+5848712 | MS.gene07019:CDS |
| GGGTAGGACTTTAGGATTGG+AGG | 0.452722 | 7.3:+5845978 | MS.gene07019:CDS |
| ACCCGAACCGCAACAACTTC+AGG | 0.453206 | 7.3:-5846201 | None:intergenic |
| GGCCAAGCATATAGTGGAAG+TGG | 0.455936 | 7.3:+5848781 | MS.gene07019:CDS |
| ATTCAGATTTGTAAATCTCA+TGG | 0.457675 | 7.3:+5848642 | MS.gene07019:intron |
| ATTCTTACTCAGGAAGAAAC+CGG | 0.461381 | 7.3:+5845874 | MS.gene07019:CDS |
| CCAAAATAGCAGCATGTGAA+AGG | 0.461533 | 7.3:-5847427 | None:intergenic |
| TTGTTCCATGAGTTGATCCC+GGG | 0.464658 | 7.3:-5847465 | None:intergenic |
| AGCAGAGGCCAAGCATATAG+TGG | 0.467264 | 7.3:+5848775 | MS.gene07019:CDS |
| AGAAGTTCATCTGGAGGATA+AGG | 0.468819 | 7.3:-5845496 | None:intergenic |
| TTGACAATAGGAAGGTTTGT+TGG | 0.470136 | 7.3:-5846090 | None:intergenic |
| AAAGACCACTCTTGTGGAGT+TGG | 0.471472 | 7.3:+5845957 | MS.gene07019:CDS |
| TGGTAGCCTTGAATTAGAAA+TGG | 0.472836 | 7.3:+5847730 | MS.gene07019:CDS |
| GTAGTCAAACTTGGGATTTG+TGG | 0.473180 | 7.3:+5848721 | MS.gene07019:CDS |
| TGCTTTCTTTCCATATAGAT+GGG | 0.474314 | 7.3:+5845606 | MS.gene07019:CDS |
| TTTGTTCCATGAGTTGATCC+CGG | 0.480126 | 7.3:-5847466 | None:intergenic |
| AAGACCACTCTTGTGGAGTT+GGG | 0.480183 | 7.3:+5845958 | MS.gene07019:CDS |
| ACAAAATAAATGAGTTCGAC+AGG | 0.487975 | 7.3:-5845574 | None:intergenic |
| TCTATCATAACCCTCTGCTC+TGG | 0.492566 | 7.3:-5847635 | None:intergenic |
| GTTGGGTAGGACTTTAGGAT+TGG | 0.493614 | 7.3:+5845975 | MS.gene07019:CDS |
| TGGAGGAGTCCATGCGAGCC+CGG | 0.494071 | 7.3:+5847447 | MS.gene07019:CDS |
| TGTGGTATACGCATAGCTCT+CGG | 0.503245 | 7.3:-5846129 | None:intergenic |
| GAACCACTGCTAGATCGAAC+AGG | 0.510532 | 7.3:-5848463 | None:intergenic |
| GGAGGAGTCCATGCGAGCCC+GGG | 0.516805 | 7.3:+5847448 | MS.gene07019:CDS |
| GTTCTTAAGGAACAACTCAC+GGG | 0.520997 | 7.3:-5845818 | None:intergenic |
| AACCAGAATCCTTACAGGAT+TGG | 0.521860 | 7.3:+5848064 | MS.gene07019:CDS |
| TTCAGATTTGTAAATCTCAT+GGG | 0.524035 | 7.3:+5848643 | MS.gene07019:intron |
| TCTGCTTGCAGCTTGATGAT+CGG | 0.525516 | 7.3:-5848758 | None:intergenic |
| AGGAGGTCGCCAATCCTGTA+AGG | 0.525729 | 7.3:-5848073 | None:intergenic |
| AAATGACCATCACTTGATGC+TGG | 0.529879 | 7.3:-5848105 | None:intergenic |
| GGAAGAGCTTGATAGGGAGA+TGG | 0.530026 | 7.3:+5845846 | MS.gene07019:CDS |
| CTACATTTGTAGTCAAACTT+GGG | 0.530312 | 7.3:+5848713 | MS.gene07019:CDS |
| GTGGTATACGCATAGCTCTC+GGG | 0.531017 | 7.3:-5846128 | None:intergenic |
| TGTTCTTAAGGAACAACTCA+CGG | 0.533686 | 7.3:-5845819 | None:intergenic |
| GATGGGACTTATTCTTACTC+AGG | 0.538781 | 7.3:+5845864 | MS.gene07019:CDS |
| ATGGGTTCTTATGCAGTTTG+GGG | 0.539955 | 7.3:+5845624 | MS.gene07019:CDS |
| TTAACTTATCATGTACAAGT+TGG | 0.540061 | 7.3:+5846057 | MS.gene07019:CDS |
| GATCTGTCCCGACTGGAAGA+TGG | 0.542916 | 7.3:+5847710 | MS.gene07019:CDS |
| TTACTCAATGATGACGACAT+AGG | 0.543430 | 7.3:+5848826 | MS.gene07019:CDS |
| AGGGGCAAGAATTAAAGTAA+TGG | 0.544261 | 7.3:-5847920 | None:intergenic |
| ACTCTGAGACTGAGTAAACT+TGG | 0.544636 | 7.3:-5848437 | None:intergenic |
| TCATTTCTATATACGAGTCC+AGG | 0.548157 | 7.3:+5848122 | MS.gene07019:CDS |
| GAAGAGCTTGATAGGGAGAT+GGG | 0.548570 | 7.3:+5845847 | MS.gene07019:CDS |
| CAATGCTGTCAAATATACTA+AGG | 0.548729 | 7.3:+5848008 | MS.gene07019:CDS |
| CATGGGTGGGCACATATGGA+TGG | 0.549664 | 7.3:+5848660 | MS.gene07019:CDS |
| GCGAGCCCGGGATCAACTCA+TGG | 0.550447 | 7.3:+5847460 | MS.gene07019:CDS |
| CTGAACTGAATCCAGAGCAG+AGG | 0.550673 | 7.3:+5847624 | MS.gene07019:CDS |
| AAGGCTACCATCTTCCAGTC+GGG | 0.554665 | 7.3:-5847717 | None:intergenic |
| CAAAATAGCAGCATGTGAAA+GGG | 0.558668 | 7.3:-5847426 | None:intergenic |
| CTTGATGCTGGATAAAACTC+AGG | 0.561674 | 7.3:-5848093 | None:intergenic |
| CAGGTTAAGGATTCTGGATG+TGG | 0.561926 | 7.3:+5848382 | MS.gene07019:intron |
| CTTGCAGCTTGATGATCGGA+TGG | 0.567335 | 7.3:-5848754 | None:intergenic |
| CAAGGCGGAAGAGCTTGATA+GGG | 0.569408 | 7.3:+5845840 | MS.gene07019:CDS |
| TGGCATGAGTAGGTAGATCA+GGG | 0.573826 | 7.3:-5847939 | None:intergenic |
| AGATTTGTAAATCTCATGGG+TGG | 0.574861 | 7.3:+5848646 | MS.gene07019:intron |
| ACGTTGCCTTAGATTTAGCT+CGG | 0.574999 | 7.3:+5847489 | MS.gene07019:CDS |
| TGCTGTCAAATATACTAAGG+AGG | 0.577420 | 7.3:+5848011 | MS.gene07019:CDS |
| GCTGTCAAATATACTAAGGA+GGG | 0.577474 | 7.3:+5848012 | MS.gene07019:CDS |
| TATTCTAAAGACCACTCTTG+TGG | 0.580698 | 7.3:+5845951 | MS.gene07019:CDS |
| GTAAACTTGGTAAAGAGATG+TGG | 0.583173 | 7.3:-5848424 | None:intergenic |
| GCTAGGATAAGACCTCTTGT+CGG | 0.586111 | 7.3:+5846165 | MS.gene07019:CDS |
| TGTTCTAGATCTGTCCCGAC+TGG | 0.586169 | 7.3:+5847703 | MS.gene07019:CDS |
| CACACACTTGTCCACTTGCT+AGG | 0.588144 | 7.3:+5846148 | MS.gene07019:CDS |
| TTTCATGATTCATGACTGCA+AGG | 0.589191 | 7.3:-5847550 | None:intergenic |
| CCACTCTTGTGGAGTTGGGT+AGG | 0.594476 | 7.3:+5845962 | MS.gene07019:CDS |
| GATTTGTAAATCTCATGGGT+GGG | 0.596709 | 7.3:+5848647 | MS.gene07019:intron |
| AGACTTCATTGACAATAGGA+AGG | 0.597850 | 7.3:-5846098 | None:intergenic |
| GTAAGTGCTTAAATCTAGCA+AGG | 0.598885 | 7.3:-5848807 | None:intergenic |
| CAAGGCTACCATCTTCCAGT+CGG | 0.599285 | 7.3:-5847718 | None:intergenic |
| TGAGTTGTTCCTTAAGAACA+AGG | 0.610418 | 7.3:+5845822 | MS.gene07019:CDS |
| GCACATATGGATGGAGAGCG+AGG | 0.610844 | 7.3:+5848669 | MS.gene07019:CDS |
| GGCACATATCTTCCGACAAG+AGG | 0.613814 | 7.3:-5846177 | None:intergenic |
| TGAACTGAATCCAGAGCAGA+GGG | 0.614850 | 7.3:+5847625 | MS.gene07019:CDS |
| AAGAGATGTGGAATATCTTG+TGG | 0.615014 | 7.3:-5848412 | None:intergenic |
| AGAGGTCTTATCCTAGCAAG+TGG | 0.615685 | 7.3:-5846159 | None:intergenic |
| TCATCACCGATGGCATGAGT+AGG | 0.616501 | 7.3:-5847949 | None:intergenic |
| CTTAGATTTAGCTCGGCGAG+AGG | 0.619358 | 7.3:+5847496 | MS.gene07019:CDS |
| AGCACACGACACTTTAGCGA+TGG | 0.621416 | 7.3:-5845731 | None:intergenic |
| GATCATCAAGCTGCAAGCAG+AGG | 0.631663 | 7.3:+5848760 | MS.gene07019:CDS |
| CGCAAGTGCGATTAGAACGT+CGG | 0.632134 | 7.3:-5845539 | None:intergenic |
| CAAGCATATAGTGGAAGTGG+AGG | 0.635632 | 7.3:+5848784 | MS.gene07019:CDS |
| ATGCCATCGGTGATGAAAAG+CGG | 0.635694 | 7.3:+5847956 | MS.gene07019:CDS |
| TGTGCCACCTGAAGTTGTTG+CGG | 0.636371 | 7.3:+5846194 | MS.gene07019:CDS |
| ATGAACAAGCATAAGTGCAG+TGG | 0.643228 | 7.3:-5845767 | None:intergenic |
| CCTACCCAACTCCACAAGAG+TGG | 0.646184 | 7.3:-5845962 | None:intergenic |
| GATCTACCTACTCATGCCAT+CGG | 0.647848 | 7.3:+5847943 | MS.gene07019:CDS |
| CCTCTCCCAAAACACCATGA+AGG | 0.651300 | 7.3:-5847763 | None:intergenic |
| CACATATGGATGGAGAGCGA+GGG | 0.654671 | 7.3:+5848670 | MS.gene07019:CDS |
| GGACCTGTTCGATCTAGCAG+TGG | 0.657911 | 7.3:+5848460 | MS.gene07019:CDS |
| CGAACCGCAACAACTTCAGG+TGG | 0.664993 | 7.3:-5846198 | None:intergenic |
| CTGTGGATGCCATCAAGAAG+TGG | 0.665478 | 7.3:+5846009 | MS.gene07019:CDS |
| TTGACAAGAAGTTCATCTGG+AGG | 0.684589 | 7.3:-5845502 | None:intergenic |
| GATGCTGGATAAAACTCAGG+AGG | 0.685050 | 7.3:-5848090 | None:intergenic |
| CTAGCAAGTGGACAAGTGTG+TGG | 0.685475 | 7.3:-5846147 | None:intergenic |
| AATGCTATAATTGCATGCAT+CGG | 0.690508 | 7.3:-5847581 | None:intergenic |
| GGCATGAGTAGGTAGATCAG+GGG | 0.696928 | 7.3:-5847938 | None:intergenic |
| AAGTTTACTCAGTCTCAGAG+TGG | 0.708425 | 7.3:+5848439 | MS.gene07019:CDS |
| GTTGTTCCTTAAGAACAAGG+CGG | 0.762407 | 7.3:+5845825 | MS.gene07019:CDS |
| GATTGGAGGAATGTGCACTG+TGG | 0.783064 | 7.3:+5845992 | MS.gene07019:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTGATTTCTTTTATTTTAT+TGG | + | chr7.3:5846380-5846399 | MS.gene07019:intron | 10.0% |
| !! | AATAGTTGAAAATTAGGAAA+TGG | + | chr7.3:5846564-5846583 | MS.gene07019:intron | 20.0% |
| !! | AATTCAATCACATTAACATA+TGG | - | chr7.3:5848184-5848203 | None:intergenic | 20.0% |
| !! | AATTTCAAACACAGTTAATA+TGG | - | chr7.3:5847230-5847249 | None:intergenic | 20.0% |
| !! | CAAATTTCCAAATTAATGAT+TGG | + | chr7.3:5846241-5846260 | MS.gene07019:intron | 20.0% |
| !! | GTATTAAATACAAATATCAC+AGG | - | chr7.3:5846772-5846791 | None:intergenic | 20.0% |
| !! | TTAATATGCATTTCACATAA+GGG | - | chr7.3:5848566-5848585 | None:intergenic | 20.0% |
| !!! | AAACTTTTCATTCAATTGTA+TGG | + | chr7.3:5847168-5847187 | MS.gene07019:intron | 20.0% |
| !!! | AAAGTTTCAGGTATTTAATT+TGG | - | chr7.3:5847155-5847174 | None:intergenic | 20.0% |
| ! | AAATAACTATAAAGCCCAAA+TGG | - | chr7.3:5846604-5846623 | None:intergenic | 25.0% |
| ! | AAATTTACAACAAATGTGTG+TGG | + | chr7.3:5847070-5847089 | MS.gene07019:intron | 25.0% |
| ! | AAATTTGACAAATGTAGAAG+CGG | - | chr7.3:5846228-5846247 | None:intergenic | 25.0% |
| ! | AAGTCGATAACATAATGAAA+AGG | - | chr7.3:5848284-5848303 | None:intergenic | 25.0% |
| ! | AATAGAAAACAACGGAAATA+CGG | - | chr7.3:5846437-5846456 | None:intergenic | 25.0% |
| ! | AATTTACAACAAATGTGTGT+GGG | + | chr7.3:5847071-5847090 | MS.gene07019:intron | 25.0% |
| ! | ACAATTGAATGAAAAGTTTC+AGG | - | chr7.3:5847167-5847186 | None:intergenic | 25.0% |
| ! | ACTAAATTTAAGAACGAGAT+TGG | + | chr7.3:5846958-5846977 | MS.gene07019:intron | 25.0% |
| ! | AGAAAAGGAATAGAAAACAA+CGG | - | chr7.3:5846445-5846464 | None:intergenic | 25.0% |
| ! | ATACGGAATAGAAAATATTC+AGG | - | chr7.3:5846420-5846439 | None:intergenic | 25.0% |
| ! | ATTCAGATTTGTAAATCTCA+TGG | + | chr7.3:5848642-5848661 | MS.gene07019:intron | 25.0% |
| ! | CAACTGTTAGAAATTAATCT+AGG | + | chr7.3:5848314-5848333 | MS.gene07019:intron | 25.0% |
| ! | CTTAAGTAAAGAACCATATT+AGG | + | chr7.3:5846665-5846684 | MS.gene07019:intron | 25.0% |
| ! | GAATAAAACACTTAAAAGTC+AGG | - | chr7.3:5847098-5847117 | None:intergenic | 25.0% |
| ! | GCATAGAATAGTTGAAAATT+AGG | + | chr7.3:5846558-5846577 | MS.gene07019:intron | 25.0% |
| ! | GTTAATATGCATTTCACATA+AGG | - | chr7.3:5848567-5848586 | None:intergenic | 25.0% |
| ! | GTTAATGTGATTGAATTCTT+GGG | + | chr7.3:5848187-5848206 | MS.gene07019:intron | 25.0% |
| ! | GTTTAAGCAATCAAAAGAAA+AGG | - | chr7.3:5846460-5846479 | None:intergenic | 25.0% |
| ! | TACGGAATAGAAAATATTCA+GGG | - | chr7.3:5846419-5846438 | None:intergenic | 25.0% |
| ! | TGTTAATGTGATTGAATTCT+TGG | + | chr7.3:5848186-5848205 | MS.gene07019:intron | 25.0% |
| ! | TTAAAGTATGAGAAAGTTGT+AGG | - | chr7.3:5846041-5846060 | None:intergenic | 25.0% |
| ! | TTAACTTATCATGTACAAGT+TGG | + | chr7.3:5846057-5846076 | MS.gene07019:CDS | 25.0% |
| ! | TTCAGATTTGTAAATCTCAT+GGG | + | chr7.3:5848643-5848662 | MS.gene07019:intron | 25.0% |
| !! | ATTGAAGAGTAGTAATGTTT+TGG | + | chr7.3:5847664-5847683 | MS.gene07019:CDS | 25.0% |
| !! | CAACTCATTTTATAAATCTG+TGG | + | chr7.3:5845668-5845687 | MS.gene07019:CDS | 25.0% |
| !!! | GGTATTTAATTTGGTCTTTT+CGG | - | chr7.3:5847146-5847165 | None:intergenic | 25.0% |
| !!! | TTTTTGCCATTTCTAATTCA+AGG | - | chr7.3:5847739-5847758 | None:intergenic | 25.0% |
| AAGAACGAGATTGGAAAAAT+GGG | + | chr7.3:5846967-5846986 | MS.gene07019:intron | 30.0% | |
| AATGCTATAATTGCATGCAT+CGG | - | chr7.3:5847584-5847603 | None:intergenic | 30.0% | |
| ACAAAATAAATGAGTTCGAC+AGG | - | chr7.3:5845577-5845596 | None:intergenic | 30.0% | |
| ACTAGCTATTTGTAAAAGGT+AGG | + | chr7.3:5848495-5848514 | MS.gene07019:intron | 30.0% | |
| ATATCAGCACTAGAAAATGT+TGG | - | chr7.3:5847276-5847295 | None:intergenic | 30.0% | |
| ATTTCACATAAGGGCAATAA+TGG | - | chr7.3:5848557-5848576 | None:intergenic | 30.0% | |
| CAATACATAAATGCTGTTCA+TGG | - | chr7.3:5847837-5847856 | None:intergenic | 30.0% | |
| CAATGCTGTCAAATATACTA+AGG | + | chr7.3:5848008-5848027 | MS.gene07019:CDS | 30.0% | |
| CTACATTTGTAGTCAAACTT+GGG | + | chr7.3:5848713-5848732 | MS.gene07019:CDS | 30.0% | |
| CTAGCTATTTGTAAAAGGTA+GGG | + | chr7.3:5848496-5848515 | MS.gene07019:intron | 30.0% | |
| GAAAAGAAAACGACATAAGA+TGG | - | chr7.3:5846843-5846862 | None:intergenic | 30.0% | |
| GAAAAGGTAGAGATATCTTT+GGG | - | chr7.3:5848268-5848287 | None:intergenic | 30.0% | |
| GGCAAAAAGTTATGCAATTA+TGG | + | chr7.3:5846275-5846294 | MS.gene07019:intron | 30.0% | |
| TAAGAACGAGATTGGAAAAA+TGG | + | chr7.3:5846966-5846985 | MS.gene07019:intron | 30.0% | |
| TGAAAAGGTAGAGATATCTT+TGG | - | chr7.3:5848269-5848288 | None:intergenic | 30.0% | |
| TGCTTTCTTTCCATATAGAT+GGG | + | chr7.3:5845606-5845625 | MS.gene07019:CDS | 30.0% | |
| ! | AAATCAAAATTAGACTGGCT+CGG | - | chr7.3:5846880-5846899 | None:intergenic | 30.0% |
| ! | AACTAAATGGATTCAGCATA+CGG | - | chr7.3:5847387-5847406 | None:intergenic | 30.0% |
| ! | AATCCATTTAGTTTCCATAC+AGG | + | chr7.3:5847394-5847413 | MS.gene07019:intron | 30.0% |
| ! | CATTCAATTGTATGGCTTTT+AGG | + | chr7.3:5847176-5847195 | MS.gene07019:intron | 30.0% |
| ! | TGCTTTTCTATTGTTAATGC+AGG | + | chr7.3:5847855-5847874 | MS.gene07019:intron | 30.0% |
| ! | TTTTGGCCATTGAAGATATA+TGG | + | chr7.3:5846897-5846916 | MS.gene07019:intron | 30.0% |
| !! | GAATGTTGACTCATGAAATT+AGG | + | chr7.3:5845908-5845927 | MS.gene07019:CDS | 30.0% |
| !! | TAATTTGGTCTTTTCGGATT+AGG | - | chr7.3:5847140-5847159 | None:intergenic | 30.0% |
| !! | TAGTTATTTCTCAACCATCA+AGG | + | chr7.3:5846615-5846634 | MS.gene07019:intron | 30.0% |
| !! | TTGGACTAGCTATTTGTAAA+AGG | + | chr7.3:5848491-5848510 | MS.gene07019:CDS | 30.0% |
| !!! | AACATTTTCTAGTGCTGATA+TGG | + | chr7.3:5847275-5847294 | MS.gene07019:intron | 30.0% |
| !!! | AGCCAGTCTAATTTTGATTT+TGG | + | chr7.3:5846880-5846899 | MS.gene07019:intron | 30.0% |
| !!! | AGTTTTTTCACAGATGCTAT+AGG | - | chr7.3:5847898-5847917 | None:intergenic | 30.0% |
| AACCATATTAGGTATGCATG+TGG | + | chr7.3:5846676-5846695 | MS.gene07019:intron | 35.0% | |
| AAGAGATGTGGAATATCTTG+TGG | - | chr7.3:5848415-5848434 | None:intergenic | 35.0% | |
| AATAAGTGGCTAAAAAAGGG+AGG | + | chr7.3:5846725-5846744 | MS.gene07019:intron | 35.0% | |
| ACCATATTAGGTATGCATGT+GGG | + | chr7.3:5846677-5846696 | MS.gene07019:intron | 35.0% | |
| AGAACGAGATTGGAAAAATG+GGG | + | chr7.3:5846968-5846987 | MS.gene07019:intron | 35.0% | |
| AGACTTCATTGACAATAGGA+AGG | - | chr7.3:5846101-5846120 | None:intergenic | 35.0% | |
| AGATTTGTAAATCTCATGGG+TGG | + | chr7.3:5848646-5848665 | MS.gene07019:intron | 35.0% | |
| AGGAAATGGCTATCAATCAT+TGG | + | chr7.3:5846578-5846597 | MS.gene07019:intron | 35.0% | |
| AGGGGCAAGAATTAAAGTAA+TGG | - | chr7.3:5847923-5847942 | None:intergenic | 35.0% | |
| ATAAGTGGCTAAAAAAGGGA+GGG | + | chr7.3:5846726-5846745 | MS.gene07019:intron | 35.0% | |
| ATGGCAAAAATCAACCTTCA+TGG | + | chr7.3:5847749-5847768 | MS.gene07019:CDS | 35.0% | |
| ATGTGTAAACTATATCGCAG+AGG | - | chr7.3:5846815-5846834 | None:intergenic | 35.0% | |
| ATTCTTACTCAGGAAGAAAC+CGG | + | chr7.3:5845874-5845893 | MS.gene07019:CDS | 35.0% | |
| CAAAATAGCAGCATGTGAAA+GGG | - | chr7.3:5847429-5847448 | None:intergenic | 35.0% | |
| CCCAATAAGTGGCTAAAAAA+GGG | + | chr7.3:5846722-5846741 | MS.gene07019:intron | 35.0% | |
| CTACCTGTATGGAAACTAAA+TGG | - | chr7.3:5847400-5847419 | None:intergenic | 35.0% | |
| CTATCAATCATTGGCCATTT+GGG | + | chr7.3:5846587-5846606 | MS.gene07019:intron | 35.0% | |
| CTCAATATCAAGACTGAGAT+AGG | + | chr7.3:5846923-5846942 | MS.gene07019:intron | 35.0% | |
| CTGAAGACTTCATTGACAAT+AGG | - | chr7.3:5846105-5846124 | None:intergenic | 35.0% | |
| CTGCTTTCTTTCCATATAGA+TGG | + | chr7.3:5845605-5845624 | MS.gene07019:CDS | 35.0% | |
| CTTTCCTAGAAATGTAGGTA+TGG | - | chr7.3:5848243-5848262 | None:intergenic | 35.0% | |
| GATTTGTAAATCTCATGGGT+GGG | + | chr7.3:5848647-5848666 | MS.gene07019:intron | 35.0% | |
| GCTACATTTGTAGTCAAACT+TGG | + | chr7.3:5848712-5848731 | MS.gene07019:CDS | 35.0% | |
| GCTGTCAAATATACTAAGGA+GGG | + | chr7.3:5848012-5848031 | MS.gene07019:CDS | 35.0% | |
| GGCCAAAATCAAAATTAGAC+TGG | - | chr7.3:5846885-5846904 | None:intergenic | 35.0% | |
| GGGGCAAGAATTAAAGTAAT+GGG | - | chr7.3:5847922-5847941 | None:intergenic | 35.0% | |
| GGTTCTTTACTTAAGTCACT+AGG | - | chr7.3:5846660-5846679 | None:intergenic | 35.0% | |
| GTAAACTTGGTAAAGAGATG+TGG | - | chr7.3:5848427-5848446 | None:intergenic | 35.0% | |
| GTAAGTGCTTAAATCTAGCA+AGG | - | chr7.3:5848810-5848829 | None:intergenic | 35.0% | |
| TACTTGACAAGAAGTTCATC+TGG | - | chr7.3:5845508-5845527 | None:intergenic | 35.0% | |
| TATTCTGTCTTCTACCTTGA+TGG | - | chr7.3:5846632-5846651 | None:intergenic | 35.0% | |
| TCATCCATACCTACATTTCT+AGG | + | chr7.3:5848236-5848255 | MS.gene07019:intron | 35.0% | |
| TCATTTCTATATACGAGTCC+AGG | + | chr7.3:5848122-5848141 | MS.gene07019:CDS | 35.0% | |
| TCCCAATAAGTGGCTAAAAA+AGG | + | chr7.3:5846721-5846740 | MS.gene07019:intron | 35.0% | |
| TCTGCGATATAGTTTACACA+TGG | + | chr7.3:5846814-5846833 | MS.gene07019:intron | 35.0% | |
| TGAGTTGTTCCTTAAGAACA+AGG | + | chr7.3:5845822-5845841 | MS.gene07019:CDS | 35.0% | |
| TGCATAAGAACCCATCTATA+TGG | - | chr7.3:5845619-5845638 | None:intergenic | 35.0% | |
| TGCTGTCAAATATACTAAGG+AGG | + | chr7.3:5848011-5848030 | MS.gene07019:CDS | 35.0% | |
| TGTTCTTAAGGAACAACTCA+CGG | - | chr7.3:5845822-5845841 | None:intergenic | 35.0% | |
| TTGACAATAGGAAGGTTTGT+TGG | - | chr7.3:5846093-5846112 | None:intergenic | 35.0% | |
| TTTCATGATTCATGACTGCA+AGG | - | chr7.3:5847553-5847572 | None:intergenic | 35.0% | |
| ! | AATCAACCTTCATGGTGTTT+TGG | + | chr7.3:5847757-5847776 | MS.gene07019:CDS | 35.0% |
| ! | ACTTTCTAGCACTATCAGTA+GGG | - | chr7.3:5846311-5846330 | None:intergenic | 35.0% |
| ! | AGCATTGTCATCACTTCTTT+TGG | + | chr7.3:5847598-5847617 | MS.gene07019:CDS | 35.0% |
| ! | ATCAACCTTCATGGTGTTTT+GGG | + | chr7.3:5847758-5847777 | MS.gene07019:CDS | 35.0% |
| ! | CAGACACTTTTGAATGTTGT+GGG | + | chr7.3:5847985-5848004 | MS.gene07019:CDS | 35.0% |
| ! | TATTCTAAAGACCACTCTTG+TGG | + | chr7.3:5845951-5845970 | MS.gene07019:CDS | 35.0% |
| ! | TGGTAGCCTTGAATTAGAAA+TGG | + | chr7.3:5847730-5847749 | MS.gene07019:CDS | 35.0% |
| ! | TTACTCAATGATGACGACAT+AGG | + | chr7.3:5848826-5848845 | MS.gene07019:CDS | 35.0% |
| ! | TTTTATCCAGCATCAAGTGA+TGG | + | chr7.3:5848099-5848118 | MS.gene07019:CDS | 35.0% |
| !! | AAATTAGGAGCACTCTTGAT+AGG | + | chr7.3:5845923-5845942 | MS.gene07019:CDS | 35.0% |
| !! | ATGTTGGCGACATTTTGAAA+CGG | - | chr7.3:5847260-5847279 | None:intergenic | 35.0% |
| !! | CTATTGCTGTGAACTTGTTT+TGG | + | chr7.3:5846527-5846546 | MS.gene07019:intron | 35.0% |
| !! | GGTTTTAACACTCAACAGAT+CGG | - | chr7.3:5845800-5845819 | None:intergenic | 35.0% |
| !! | GTTTTAACACTCAACAGATC+GGG | - | chr7.3:5845799-5845818 | None:intergenic | 35.0% |
| !!! | CCCTTTTTTAGCCACTTATT+GGG | - | chr7.3:5846725-5846744 | None:intergenic | 35.0% |
| !!! | TCCCTTTTTTAGCCACTTAT+TGG | - | chr7.3:5846726-5846745 | None:intergenic | 35.0% |
| !!! | TGTGAACTTGTTTTGGAGTT+TGG | + | chr7.3:5846534-5846553 | MS.gene07019:intron | 35.0% |
| AAATGACCATCACTTGATGC+TGG | - | chr7.3:5848108-5848127 | None:intergenic | 40.0% | |
| AACCAGAATCCTTACAGGAT+TGG | + | chr7.3:5848064-5848083 | MS.gene07019:CDS | 40.0% | |
| AAGTTTACTCAGTCTCAGAG+TGG | + | chr7.3:5848439-5848458 | MS.gene07019:CDS | 40.0% | |
| AATCTGATGCAGATCTGTCT+AGG | + | chr7.3:5847045-5847064 | MS.gene07019:intron | 40.0% | |
| ACGTTGCCTTAGATTTAGCT+CGG | + | chr7.3:5847489-5847508 | MS.gene07019:CDS | 40.0% | |
| AGAAGTTCATCTGGAGGATA+AGG | - | chr7.3:5845499-5845518 | None:intergenic | 40.0% | |
| AGACTCAGAACAGAACTTAC+AGG | - | chr7.3:5846505-5846524 | None:intergenic | 40.0% | |
| AGGTTCAAACCACTTCTTGA+TGG | - | chr7.3:5846021-5846040 | None:intergenic | 40.0% | |
| ATCCTTAACCTGCACAAAGA+AGG | - | chr7.3:5848374-5848393 | None:intergenic | 40.0% | |
| ATCCTTCTTTGTGCAGGTTA+AGG | + | chr7.3:5848369-5848388 | MS.gene07019:intron | 40.0% | |
| ATGAACAAGCATAAGTGCAG+TGG | - | chr7.3:5845770-5845789 | None:intergenic | 40.0% | |
| ATGGGTTCTTATGCAGTTTG+GGG | + | chr7.3:5845624-5845643 | MS.gene07019:CDS | 40.0% | |
| CAACATTCTCACATGTCTTC+CGG | - | chr7.3:5845896-5845915 | None:intergenic | 40.0% | |
| CCAAAATAGCAGCATGTGAA+AGG | - | chr7.3:5847430-5847449 | None:intergenic | 40.0% | |
| CCATATTAGGTATGCATGTG+GGG | + | chr7.3:5846678-5846697 | MS.gene07019:intron | 40.0% | |
| CTGCACAAAGAAGGATGTTT+GGG | - | chr7.3:5848365-5848384 | None:intergenic | 40.0% | |
| CTTGATGCTGGATAAAACTC+AGG | - | chr7.3:5848096-5848115 | None:intergenic | 40.0% | |
| GAGCCACCATATATCTTCAA+TGG | - | chr7.3:5846906-5846925 | None:intergenic | 40.0% | |
| GATGGGACTTATTCTTACTC+AGG | + | chr7.3:5845864-5845883 | MS.gene07019:CDS | 40.0% | |
| GCTATCAATCATTGGCCATT+TGG | + | chr7.3:5846586-5846605 | MS.gene07019:intron | 40.0% | |
| GCTCAGGCCAATCATTAATT+TGG | - | chr7.3:5846251-5846270 | None:intergenic | 40.0% | |
| GTAGTCAAACTTGGGATTTG+TGG | + | chr7.3:5848721-5848740 | MS.gene07019:CDS | 40.0% | |
| GTTCTTAAGGAACAACTCAC+GGG | - | chr7.3:5845821-5845840 | None:intergenic | 40.0% | |
| GTTGTTCCTTAAGAACAAGG+CGG | + | chr7.3:5845825-5845844 | MS.gene07019:CDS | 40.0% | |
| TATCAAGACTGAGATAGGCT+CGG | + | chr7.3:5846928-5846947 | MS.gene07019:intron | 40.0% | |
| TGCAAAACCAGAATCCTTAC+AGG | + | chr7.3:5848059-5848078 | MS.gene07019:CDS | 40.0% | |
| TGCACAAAGAAGGATGTTTG+GGG | - | chr7.3:5848364-5848383 | None:intergenic | 40.0% | |
| TGGCCATTGAAGATATATGG+TGG | + | chr7.3:5846900-5846919 | MS.gene07019:intron | 40.0% | |
| TTGACAAGAAGTTCATCTGG+AGG | - | chr7.3:5845505-5845524 | None:intergenic | 40.0% | |
| TTTGTGCAGGTTAAGGATTC+TGG | + | chr7.3:5848376-5848395 | MS.gene07019:intron | 40.0% | |
| ! | AGATGGGTTCTTATGCAGTT+TGG | + | chr7.3:5845622-5845641 | MS.gene07019:CDS | 40.0% |
| ! | CACTTTCTAGCACTATCAGT+AGG | - | chr7.3:5846312-5846331 | None:intergenic | 40.0% |
| ! | CTACTGATAGTGCTAGAAAG+TGG | + | chr7.3:5846310-5846329 | MS.gene07019:intron | 40.0% |
| ! | GATGGGTTCTTATGCAGTTT+GGG | + | chr7.3:5845623-5845642 | MS.gene07019:CDS | 40.0% |
| ! | GCAGACACTTTTGAATGTTG+TGG | + | chr7.3:5847984-5848003 | MS.gene07019:CDS | 40.0% |
| ! | GGGGCTTTTATTGTTCTATG+TGG | + | chr7.3:5845643-5845662 | MS.gene07019:CDS | 40.0% |
| ! | TAAATGGATTCAGCATACGG+AGG | - | chr7.3:5847384-5847403 | None:intergenic | 40.0% |
| ! | TAACTTTTTGCCGAAAGCTC+AGG | - | chr7.3:5846267-5846286 | None:intergenic | 40.0% |
| !! | ACTCTGAGACTGAGTAAACT+TGG | - | chr7.3:5848440-5848459 | None:intergenic | 40.0% |
| !! | CCTTTCACATGCTGCTATTT+TGG | + | chr7.3:5847427-5847446 | MS.gene07019:CDS | 40.0% |
| !! | TAATGATTGGCCTGAGCTTT+CGG | + | chr7.3:5846254-5846273 | MS.gene07019:intron | 40.0% |
| !! | TTTGGTCTTTTCGGATTAGG+AGG | - | chr7.3:5847137-5847156 | None:intergenic | 40.0% |
| !! | TTTGTTCCATGAGTTGATCC+CGG | - | chr7.3:5847469-5847488 | None:intergenic | 40.0% |
| !!! | TTCACATGCTGCTATTTTGG+AGG | + | chr7.3:5847430-5847449 | MS.gene07019:CDS | 40.0% |
| AAAGACCACTCTTGTGGAGT+TGG | + | chr7.3:5845957-5845976 | MS.gene07019:CDS | 45.0% | |
| AAGACCACTCTTGTGGAGTT+GGG | + | chr7.3:5845958-5845977 | MS.gene07019:CDS | 45.0% | |
| ACGAGTCCAGGTTATGACTT+TGG | + | chr7.3:5848134-5848153 | MS.gene07019:intron | 45.0% | |
| AGCCACTTATTGGGATTCAG+CGG | - | chr7.3:5846716-5846735 | None:intergenic | 45.0% | |
| ATCAAGACTGAGATAGGCTC+GGG | + | chr7.3:5846929-5846948 | MS.gene07019:intron | 45.0% | |
| ATGCCATCGGTGATGAAAAG+CGG | + | chr7.3:5847956-5847975 | MS.gene07019:CDS | 45.0% | |
| ATGGCATGAGTAGGTAGATC+AGG | - | chr7.3:5847943-5847962 | None:intergenic | 45.0% | |
| CAGGTTAAGGATTCTGGATG+TGG | + | chr7.3:5848382-5848401 | MS.gene07019:intron | 45.0% | |
| CCAAACATCCTTCTTTGTGC+AGG | + | chr7.3:5848363-5848382 | MS.gene07019:intron | 45.0% | |
| CCCCACATGCATACCTAATA+TGG | - | chr7.3:5846681-5846700 | None:intergenic | 45.0% | |
| CCTGCACAAAGAAGGATGTT+TGG | - | chr7.3:5848366-5848385 | None:intergenic | 45.0% | |
| CTCCACTTCCACTATATGCT+TGG | - | chr7.3:5848786-5848805 | None:intergenic | 45.0% | |
| GAAGAGCTTGATAGGGAGAT+GGG | + | chr7.3:5845847-5845866 | MS.gene07019:CDS | 45.0% | |
| GAGATGCCAAAGTCATAACC+TGG | - | chr7.3:5848143-5848162 | None:intergenic | 45.0% | |
| GATCTACCTACTCATGCCAT+CGG | + | chr7.3:5847943-5847962 | MS.gene07019:CDS | 45.0% | |
| GATGCTGGATAAAACTCAGG+AGG | - | chr7.3:5848093-5848112 | None:intergenic | 45.0% | |
| GCTAGGATAAGACCTCTTGT+CGG | + | chr7.3:5846165-5846184 | MS.gene07019:CDS | 45.0% | |
| GGGCTCTTTCCTAGAAATGT+AGG | - | chr7.3:5848248-5848267 | None:intergenic | 45.0% | |
| TCTATCATAACCCTCTGCTC+TGG | - | chr7.3:5847638-5847657 | None:intergenic | 45.0% | |
| TGAACTGAATCCAGAGCAGA+GGG | + | chr7.3:5847625-5847644 | MS.gene07019:CDS | 45.0% | |
| TGGCATGAGTAGGTAGATCA+GGG | - | chr7.3:5847942-5847961 | None:intergenic | 45.0% | |
| TGTCGATGTTGTTGCAGATC+AGG | + | chr7.3:5846353-5846372 | MS.gene07019:intron | 45.0% | |
| TGTGGTATACGCATAGCTCT+CGG | - | chr7.3:5846132-5846151 | None:intergenic | 45.0% | |
| ! | AGAGGTCTTATCCTAGCAAG+TGG | - | chr7.3:5846162-5846181 | None:intergenic | 45.0% |
| ! | CAAGCATATAGTGGAAGTGG+AGG | + | chr7.3:5848784-5848803 | MS.gene07019:CDS | 45.0% |
| ! | TCTGCTTGCAGCTTGATGAT+CGG | - | chr7.3:5848761-5848780 | None:intergenic | 45.0% |
| !! | GGCAATAATGGTGACTTGCT+AGG | - | chr7.3:5848545-5848564 | None:intergenic | 45.0% |
| !! | GTTGGGTAGGACTTTAGGAT+TGG | + | chr7.3:5845975-5845994 | MS.gene07019:CDS | 45.0% |
| !! | TTGTTCCATGAGTTGATCCC+GGG | - | chr7.3:5847468-5847487 | None:intergenic | 45.0% |
| AAAGTGGCGAGACCATGAGT+TGG | + | chr7.3:5846326-5846345 | MS.gene07019:intron | 50.0% | |
| AAGGCTACCATCTTCCAGTC+GGG | - | chr7.3:5847720-5847739 | None:intergenic | 50.0% | |
| AAGGGCAACTGCTACCTGTA+TGG | - | chr7.3:5847411-5847430 | None:intergenic | 50.0% | |
| ACAAGGCGGAAGAGCTTGAT+AGG | + | chr7.3:5845839-5845858 | MS.gene07019:CDS | 50.0% | |
| ACCTGAAGTTGTTGCGGTTC+GGG | + | chr7.3:5846200-5846219 | MS.gene07019:CDS | 50.0% | |
| AGCACACGACACTTTAGCGA+TGG | - | chr7.3:5845734-5845753 | None:intergenic | 50.0% | |
| AGCAGAGGCCAAGCATATAG+TGG | + | chr7.3:5848775-5848794 | MS.gene07019:CDS | 50.0% | |
| ATCTCATGGGTGGGCACATA+TGG | + | chr7.3:5848656-5848675 | MS.gene07019:CDS | 50.0% | |
| CAAGGCGGAAGAGCTTGATA+GGG | + | chr7.3:5845840-5845859 | MS.gene07019:CDS | 50.0% | |
| CAAGGCTACCATCTTCCAGT+CGG | - | chr7.3:5847721-5847740 | None:intergenic | 50.0% | |
| CAATCATGTCCCCACATCTG+AGG | - | chr7.3:5847321-5847340 | None:intergenic | 50.0% | |
| CACACACTTGTCCACTTGCT+AGG | + | chr7.3:5846148-5846167 | MS.gene07019:CDS | 50.0% | |
| CACATATGGATGGAGAGCGA+GGG | + | chr7.3:5848670-5848689 | MS.gene07019:CDS | 50.0% | |
| CACCTGAAGTTGTTGCGGTT+CGG | + | chr7.3:5846199-5846218 | MS.gene07019:CDS | 50.0% | |
| CATCGACAAGCTCCAACTCA+TGG | - | chr7.3:5846341-5846360 | None:intergenic | 50.0% | |
| CCTCTCCCAAAACACCATGA+AGG | - | chr7.3:5847766-5847785 | None:intergenic | 50.0% | |
| CGCAAGTGCGATTAGAACGT+CGG | - | chr7.3:5845542-5845561 | None:intergenic | 50.0% | |
| CGCCAATCCTGTAAGGATTC+TGG | - | chr7.3:5848069-5848088 | None:intergenic | 50.0% | |
| CTAGCAAGTGGACAAGTGTG+TGG | - | chr7.3:5846150-5846169 | None:intergenic | 50.0% | |
| CTCACATGCACCTCAGATGT+GGG | + | chr7.3:5847308-5847327 | MS.gene07019:intron | 50.0% | |
| CTCTCGCCGAGCTAAATCTA+AGG | - | chr7.3:5847498-5847517 | None:intergenic | 50.0% | |
| CTGAACTGAATCCAGAGCAG+AGG | + | chr7.3:5847624-5847643 | MS.gene07019:CDS | 50.0% | |
| CTGTGGATGCCATCAAGAAG+TGG | + | chr7.3:5846009-5846028 | MS.gene07019:CDS | 50.0% | |
| GAACCACTGCTAGATCGAAC+AGG | - | chr7.3:5848466-5848485 | None:intergenic | 50.0% | |
| GATCATCAAGCTGCAAGCAG+AGG | + | chr7.3:5848760-5848779 | MS.gene07019:CDS | 50.0% | |
| GATTGGAGGAATGTGCACTG+TGG | + | chr7.3:5845992-5846011 | MS.gene07019:CDS | 50.0% | |
| GGAAGAGCTTGATAGGGAGA+TGG | + | chr7.3:5845846-5845865 | MS.gene07019:CDS | 50.0% | |
| GGCACATATCTTCCGACAAG+AGG | - | chr7.3:5846180-5846199 | None:intergenic | 50.0% | |
| GGCATGAGTAGGTAGATCAG+GGG | - | chr7.3:5847941-5847960 | None:intergenic | 50.0% | |
| GTGGAGTTGGGTAGGACTTT+AGG | + | chr7.3:5845970-5845989 | MS.gene07019:CDS | 50.0% | |
| GTGGTATACGCATAGCTCTC+GGG | - | chr7.3:5846131-5846150 | None:intergenic | 50.0% | |
| GTTCGATCTAGCAGTGGTTC+AGG | + | chr7.3:5848466-5848485 | MS.gene07019:CDS | 50.0% | |
| TCACATGCACCTCAGATGTG+GGG | + | chr7.3:5847309-5847328 | MS.gene07019:intron | 50.0% | |
| TCATCACCGATGGCATGAGT+AGG | - | chr7.3:5847952-5847971 | None:intergenic | 50.0% | |
| TCTAGCAGTGGTTCAGGTCT+TGG | + | chr7.3:5848472-5848491 | MS.gene07019:CDS | 50.0% | |
| TGTGCCACCTGAAGTTGTTG+CGG | + | chr7.3:5846194-5846213 | MS.gene07019:CDS | 50.0% | |
| ! | CTTAGATTTAGCTCGGCGAG+AGG | + | chr7.3:5847496-5847515 | MS.gene07019:CDS | 50.0% |
| ! | CTTGCAGCTTGATGATCGGA+TGG | - | chr7.3:5848757-5848776 | None:intergenic | 50.0% |
| ! | GCTCTTCCGCCTTGTTCTTA+AGG | - | chr7.3:5845834-5845853 | None:intergenic | 50.0% |
| ! | GGCCAAGCATATAGTGGAAG+TGG | + | chr7.3:5848781-5848800 | MS.gene07019:CDS | 50.0% |
| ! | GTTTGGGGTCAGTCATGAGA+TGG | - | chr7.3:5848349-5848368 | None:intergenic | 50.0% |
| ! | TGTTCTAGATCTGTCCCGAC+TGG | + | chr7.3:5847703-5847722 | MS.gene07019:CDS | 50.0% |
| !! | GGGTAGGACTTTAGGATTGG+AGG | + | chr7.3:5845978-5845997 | MS.gene07019:CDS | 50.0% |
| !!! | AAGCCGCTTTTCATCACCGA+TGG | - | chr7.3:5847962-5847981 | None:intergenic | 50.0% |
| !!! | CCTTCATGGTGTTTTGGGAG+AGG | + | chr7.3:5847763-5847782 | MS.gene07019:CDS | 50.0% |
| ACCCGAACCGCAACAACTTC+AGG | - | chr7.3:5846204-5846223 | None:intergenic | 55.0% | |
| AGGAGGTCGCCAATCCTGTA+AGG | - | chr7.3:5848076-5848095 | None:intergenic | 55.0% | |
| CATGGGTGGGCACATATGGA+TGG | + | chr7.3:5848660-5848679 | MS.gene07019:CDS | 55.0% | |
| CCACTCTTGTGGAGTTGGGT+AGG | + | chr7.3:5845962-5845981 | MS.gene07019:CDS | 55.0% | |
| CCTACCCAACTCCACAAGAG+TGG | - | chr7.3:5845965-5845984 | None:intergenic | 55.0% | |
| CCTCACATGCACCTCAGATG+TGG | + | chr7.3:5847307-5847326 | MS.gene07019:intron | 55.0% | |
| CGAACCGCAACAACTTCAGG+TGG | - | chr7.3:5846201-5846220 | None:intergenic | 55.0% | |
| GAGAGCGAGGGTCACGATAA+AGG | + | chr7.3:5848682-5848701 | MS.gene07019:CDS | 55.0% | |
| GATCTGTCCCGACTGGAAGA+TGG | + | chr7.3:5847710-5847729 | MS.gene07019:CDS | 55.0% | |
| GCACATATGGATGGAGAGCG+AGG | + | chr7.3:5848669-5848688 | MS.gene07019:CDS | 55.0% | |
| GGACCTGTTCGATCTAGCAG+TGG | + | chr7.3:5848460-5848479 | MS.gene07019:CDS | 55.0% | |
| GGCCGCTGAATCCCAATAAG+TGG | + | chr7.3:5846711-5846730 | MS.gene07019:intron | 55.0% | |
| GTGGCTAAAAAAGGGAGGGC+AGG | + | chr7.3:5846730-5846749 | MS.gene07019:intron | 55.0% | |
| ! | AGGAGGCATGTGCAGGCAAA+GGG | - | chr7.3:5847120-5847139 | None:intergenic | 55.0% |
| ! | CCACATCTGAGGTGCATGTG+AGG | - | chr7.3:5847310-5847329 | None:intergenic | 55.0% |
| ! | TAGGAGGCATGTGCAGGCAA+AGG | - | chr7.3:5847121-5847140 | None:intergenic | 55.0% |
| ! | TCGGATTAGGAGGCATGTGC+AGG | - | chr7.3:5847127-5847146 | None:intergenic | 55.0% |
| AGCTCGGCGAGAGGCTGAAA+TGG | + | chr7.3:5847505-5847524 | MS.gene07019:CDS | 60.0% | |
| TGCATGTGGGGTATGCGCTG+AGG | + | chr7.3:5846690-5846709 | MS.gene07019:intron | 60.0% | |
| GCGAGCCCGGGATCAACTCA+TGG | + | chr7.3:5847460-5847479 | MS.gene07019:CDS | 65.0% | |
| TGGAGGAGTCCATGCGAGCC+CGG | + | chr7.3:5847447-5847466 | MS.gene07019:CDS | 65.0% | |
| ! | GAGTTGATCCCGGGCTCGCA+TGG | - | chr7.3:5847459-5847478 | None:intergenic | 65.0% |
| GGAGGAGTCCATGCGAGCCC+GGG | + | chr7.3:5847448-5847467 | MS.gene07019:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 5845466 | 5848882 | 5845466 | ID=MS.gene07019 |
| chr7.3 | mRNA | 5845466 | 5848882 | 5845466 | ID=MS.gene07019.t1;Parent=MS.gene07019 |
| chr7.3 | exon | 5845466 | 5846221 | 5845466 | ID=MS.gene07019.t1.exon1;Parent=MS.gene07019.t1 |
| chr7.3 | CDS | 5845466 | 5846221 | 5845466 | ID=cds.MS.gene07019.t1;Parent=MS.gene07019.t1 |
| chr7.3 | exon | 5847416 | 5847784 | 5847416 | ID=MS.gene07019.t1.exon2;Parent=MS.gene07019.t1 |
| chr7.3 | CDS | 5847416 | 5847784 | 5847416 | ID=cds.MS.gene07019.t1;Parent=MS.gene07019.t1 |
| chr7.3 | exon | 5847877 | 5848143 | 5847877 | ID=MS.gene07019.t1.exon3;Parent=MS.gene07019.t1 |
| chr7.3 | CDS | 5847877 | 5848143 | 5847877 | ID=cds.MS.gene07019.t1;Parent=MS.gene07019.t1 |
| chr7.3 | exon | 5848385 | 5848512 | 5848385 | ID=MS.gene07019.t1.exon4;Parent=MS.gene07019.t1 |
| chr7.3 | CDS | 5848385 | 5848512 | 5848385 | ID=cds.MS.gene07019.t1;Parent=MS.gene07019.t1 |
| chr7.3 | exon | 5848648 | 5848882 | 5848648 | ID=MS.gene07019.t1.exon5;Parent=MS.gene07019.t1 |
| chr7.3 | CDS | 5848648 | 5848882 | 5848648 | ID=cds.MS.gene07019.t1;Parent=MS.gene07019.t1 |
| Gene Sequence |
| Protein sequence |
