Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07021.t1 | XP_003625933.2 | 91.6 | 634 | 2 | 1 | 1 | 583 | 2 | 635 | 0.00E+00 | 1105.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07021.t1 | A2XL32 | 70.8 | 592 | 122 | 1 | 1 | 541 | 1 | 592 | 9.1e-232 | 804.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07021.t1 | G7KSQ0 | 91.6 | 634 | 2 | 1 | 1 | 583 | 2 | 635 | 0.0e+00 | 1105.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene061793 | MS.gene07021 | PPI |
| MS.gene045131 | MS.gene07021 | PPI |
| MS.gene052190 | MS.gene07021 | PPI |
| MS.gene91939 | MS.gene07021 | PPI |
| MS.gene91938 | MS.gene07021 | PPI |
| MS.gene032807 | MS.gene07021 | PPI |
| MS.gene49566 | MS.gene07021 | PPI |
| MS.gene75490 | MS.gene07021 | PPI |
| MS.gene28063 | MS.gene07021 | PPI |
| MS.gene030824 | MS.gene07021 | PPI |
| MS.gene57306 | MS.gene07021 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07021.t1 | MTR_7g109150 | 91.640 | 634 | 2 | 1 | 1 | 583 | 2 | 635 | 0.0 | 1178 |
| MS.gene07021.t1 | MTR_4g031150 | 66.720 | 622 | 156 | 1 | 1 | 571 | 51 | 672 | 0.0 | 832 |
| MS.gene07021.t1 | MTR_1g073840 | 38.737 | 586 | 296 | 11 | 4 | 534 | 29 | 606 | 2.65e-116 | 363 |
| MS.gene07021.t1 | MTR_1g044210 | 36.555 | 569 | 297 | 12 | 4 | 515 | 28 | 589 | 1.75e-102 | 327 |
| MS.gene07021.t1 | MTR_7g116330 | 34.572 | 619 | 312 | 15 | 4 | 546 | 34 | 635 | 6.41e-98 | 315 |
| MS.gene07021.t1 | MTR_1g079790 | 34.810 | 632 | 336 | 15 | 2 | 571 | 26 | 643 | 9.85e-97 | 311 |
| MS.gene07021.t1 | MTR_1g079790 | 34.982 | 566 | 305 | 11 | 2 | 509 | 26 | 586 | 2.37e-91 | 294 |
| MS.gene07021.t1 | MTR_5g022470 | 33.333 | 258 | 146 | 4 | 282 | 515 | 499 | 754 | 3.02e-35 | 142 |
| MS.gene07021.t1 | MTR_5g022470 | 33.333 | 258 | 146 | 4 | 282 | 515 | 499 | 754 | 3.25e-35 | 142 |
| MS.gene07021.t1 | MTR_3g105590 | 30.252 | 357 | 192 | 13 | 242 | 544 | 310 | 663 | 1.58e-33 | 137 |
| MS.gene07021.t1 | MTR_8g080770 | 30.357 | 280 | 162 | 4 | 283 | 530 | 274 | 552 | 1.03e-32 | 134 |
| MS.gene07021.t1 | MTR_8g080770 | 30.357 | 280 | 162 | 4 | 283 | 530 | 383 | 661 | 1.07e-32 | 134 |
| MS.gene07021.t1 | MTR_8g075340 | 31.641 | 256 | 153 | 3 | 282 | 515 | 461 | 716 | 1.55e-32 | 134 |
| MS.gene07021.t1 | MTR_3g085130 | 28.716 | 296 | 173 | 5 | 283 | 541 | 228 | 522 | 4.16e-32 | 132 |
| MS.gene07021.t1 | MTR_3g085130 | 27.961 | 304 | 179 | 5 | 283 | 550 | 438 | 737 | 4.70e-32 | 132 |
| MS.gene07021.t1 | MTR_8g106150 | 31.148 | 305 | 155 | 6 | 286 | 536 | 134 | 437 | 1.15e-29 | 124 |
| MS.gene07021.t1 | MTR_8g106150 | 31.148 | 305 | 155 | 6 | 286 | 536 | 377 | 680 | 1.52e-29 | 124 |
| MS.gene07021.t1 | MTR_5g097410 | 30.389 | 283 | 158 | 5 | 286 | 530 | 611 | 892 | 2.37e-29 | 124 |
| MS.gene07021.t1 | MTR_1g013360 | 30.348 | 201 | 127 | 6 | 242 | 431 | 316 | 514 | 8.84e-21 | 97.4 |
| MS.gene07021.t1 | MTR_1g013360 | 38.393 | 112 | 64 | 3 | 432 | 540 | 585 | 694 | 1.05e-11 | 68.6 |
| MS.gene07021.t1 | MTR_1g087140 | 28.939 | 311 | 170 | 12 | 272 | 539 | 373 | 675 | 6.85e-19 | 91.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07021.t1 | AT2G40940 | 69.950 | 599 | 129 | 1 | 1 | 548 | 1 | 599 | 0.0 | 824 |
| MS.gene07021.t1 | AT1G66340 | 64.469 | 622 | 166 | 2 | 1 | 571 | 1 | 618 | 0.0 | 786 |
| MS.gene07021.t1 | AT3G23150 | 37.610 | 569 | 283 | 13 | 4 | 510 | 32 | 590 | 5.18e-103 | 324 |
| MS.gene07021.t1 | AT3G23150 | 37.805 | 574 | 285 | 13 | 4 | 515 | 32 | 595 | 2.27e-102 | 327 |
| MS.gene07021.t1 | AT3G04580 | 33.333 | 633 | 350 | 13 | 3 | 571 | 26 | 650 | 4.11e-92 | 300 |
| MS.gene07021.t1 | AT3G04580 | 33.333 | 633 | 350 | 13 | 3 | 571 | 26 | 650 | 4.11e-92 | 300 |
| MS.gene07021.t1 | AT1G04310 | 33.723 | 513 | 266 | 11 | 4 | 445 | 34 | 543 | 1.41e-71 | 242 |
| MS.gene07021.t1 | AT1G04310 | 33.723 | 513 | 266 | 11 | 4 | 445 | 34 | 543 | 1.41e-71 | 242 |
| MS.gene07021.t1 | AT5G10720 | 32.500 | 320 | 186 | 8 | 271 | 567 | 339 | 651 | 2.05e-38 | 152 |
| MS.gene07021.t1 | AT1G27320 | 30.421 | 309 | 184 | 4 | 252 | 530 | 410 | 717 | 2.89e-35 | 142 |
| MS.gene07021.t1 | AT2G17820 | 32.246 | 276 | 161 | 5 | 262 | 515 | 472 | 743 | 3.01e-35 | 142 |
| MS.gene07021.t1 | AT5G35750 | 27.701 | 361 | 217 | 9 | 218 | 541 | 516 | 869 | 8.13e-32 | 132 |
| MS.gene07021.t1 | AT2G01830 | 29.545 | 308 | 165 | 5 | 286 | 545 | 455 | 758 | 3.02e-30 | 127 |
| MS.gene07021.t1 | AT2G01830 | 29.545 | 308 | 165 | 5 | 286 | 545 | 443 | 746 | 3.30e-30 | 127 |
| MS.gene07021.t1 | AT2G01830 | 29.545 | 308 | 165 | 5 | 286 | 545 | 443 | 746 | 3.30e-30 | 127 |
| MS.gene07021.t1 | AT2G01830 | 29.545 | 308 | 165 | 5 | 286 | 545 | 443 | 746 | 3.30e-30 | 127 |
| MS.gene07021.t1 | AT2G01830 | 29.545 | 308 | 165 | 5 | 286 | 545 | 443 | 746 | 3.30e-30 | 127 |
| MS.gene07021.t1 | AT2G01830 | 29.545 | 308 | 165 | 5 | 286 | 545 | 466 | 769 | 3.94e-30 | 126 |
| MS.gene07021.t1 | AT2G47430 | 27.491 | 291 | 167 | 10 | 282 | 534 | 385 | 669 | 1.20e-16 | 84.3 |
| MS.gene07021.t1 | AT4G16250 | 23.984 | 246 | 160 | 8 | 274 | 515 | 914 | 1136 | 7.93e-12 | 68.9 |
Find 133 sgRNAs with CRISPR-Local
Find 264 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTTTCACATGCTGCTATTT+TGG | 0.127774 | 7.3:+5813484 | MS.gene07021:CDS |
| TTTGTGCAGGTTAAGGATTC+TGG | 0.190806 | 7.3:+5814433 | MS.gene07021:intron |
| AATCAACCTTCATGGTGTTT+TGG | 0.215357 | 7.3:+5813814 | MS.gene07021:CDS |
| CTGCTTTCTTTCCATATAGA+TGG | 0.223591 | 7.3:+5811662 | MS.gene07021:CDS |
| GTGGAGTTGGGTAGGACTTT+AGG | 0.238818 | 7.3:+5812027 | MS.gene07021:CDS |
| GATGGGTTCTTATGCAGTTT+GGG | 0.252158 | 7.3:+5811680 | MS.gene07021:CDS |
| AGCATTGTCATCACTTCTTT+TGG | 0.253771 | 7.3:+5813655 | MS.gene07021:CDS |
| CGCCAATCCTGTAAGGATTC+TGG | 0.273695 | 7.3:-5814123 | None:intergenic |
| TTGGACTAGCTATTTGTAAA+AGG | 0.274567 | 7.3:+5814548 | MS.gene07021:CDS |
| GCTCTTCCGCCTTGTTCTTA+AGG | 0.299367 | 7.3:-5811888 | None:intergenic |
| AGATGGGTTCTTATGCAGTT+TGG | 0.302430 | 7.3:+5811679 | MS.gene07021:CDS |
| ACAAGGCGGAAGAGCTTGAT+AGG | 0.308682 | 7.3:+5811896 | MS.gene07021:CDS |
| TGCAAAACCAGAATCCTTAC+AGG | 0.315260 | 7.3:+5814116 | MS.gene07021:CDS |
| TTAAAGTATGAGAAAGTTGT+AGG | 0.315493 | 7.3:-5812095 | None:intergenic |
| TGCATAAGAACCCATCTATA+TGG | 0.316824 | 7.3:-5811673 | None:intergenic |
| CAACATTCTCACATGTCTTC+CGG | 0.319637 | 7.3:-5811950 | None:intergenic |
| ATCTCATGGGTGGGCACATA+TGG | 0.329280 | 7.3:+5814713 | MS.gene07021:CDS |
| CACCTGAAGTTGTTGCGGTT+CGG | 0.344532 | 7.3:+5812256 | MS.gene07021:CDS |
| TCTAGCAGTGGTTCAGGTCT+TGG | 0.350863 | 7.3:+5814529 | MS.gene07021:CDS |
| ATTGAAGAGTAGTAATGTTT+TGG | 0.359573 | 7.3:+5813721 | MS.gene07021:CDS |
| CTGAAGACTTCATTGACAAT+AGG | 0.366052 | 7.3:-5812159 | None:intergenic |
| GAATGTTGACTCATGAAATT+AGG | 0.375510 | 7.3:+5811965 | MS.gene07021:CDS |
| GAGAGCGAGGGTCACGATAA+AGG | 0.377013 | 7.3:+5814739 | MS.gene07021:CDS |
| ACCTGAAGTTGTTGCGGTTC+GGG | 0.378789 | 7.3:+5812257 | MS.gene07021:CDS |
| CTCTCGCCGAGCTAAATCTA+AGG | 0.393829 | 7.3:-5813552 | None:intergenic |
| ATGGCATGAGTAGGTAGATC+AGG | 0.413426 | 7.3:-5813997 | None:intergenic |
| GTTCGATCTAGCAGTGGTTC+AGG | 0.425531 | 7.3:+5814523 | MS.gene07021:CDS |
| CTCCACTTCCACTATATGCT+TGG | 0.434484 | 7.3:-5814840 | None:intergenic |
| AAATTAGGAGCACTCTTGAT+AGG | 0.435699 | 7.3:+5811980 | MS.gene07021:CDS |
| GGGGCAAGAATTAAAGTAAT+GGG | 0.436802 | 7.3:-5813976 | None:intergenic |
| GAGTTGATCCCGGGCTCGCA+TGG | 0.439303 | 7.3:-5813513 | None:intergenic |
| TACTTGACAAGAAGTTCATC+TGG | 0.439756 | 7.3:-5811562 | None:intergenic |
| AGCTCGGCGAGAGGCTGAAA+TGG | 0.447274 | 7.3:+5813562 | MS.gene07021:CDS |
| AGGTTCAAACCACTTCTTGA+TGG | 0.447911 | 7.3:-5812075 | None:intergenic |
| GCTACATTTGTAGTCAAACT+TGG | 0.452125 | 7.3:+5814769 | MS.gene07021:CDS |
| GGGTAGGACTTTAGGATTGG+AGG | 0.452722 | 7.3:+5812035 | MS.gene07021:CDS |
| ACCCGAACCGCAACAACTTC+AGG | 0.453206 | 7.3:-5812258 | None:intergenic |
| GGCCAAGCATATAGTGGAAG+TGG | 0.455936 | 7.3:+5814838 | MS.gene07021:CDS |
| ATTCAGATTTGTAAATCTCA+TGG | 0.457675 | 7.3:+5814699 | MS.gene07021:intron |
| ATTCTTACTCAGGAAGAAAC+CGG | 0.461381 | 7.3:+5811931 | MS.gene07021:CDS |
| CCAAAATAGCAGCATGTGAA+AGG | 0.461533 | 7.3:-5813484 | None:intergenic |
| TTGTTCCATGAGTTGATCCC+GGG | 0.464658 | 7.3:-5813522 | None:intergenic |
| AGCAGAGGCCAAGCATATAG+TGG | 0.467264 | 7.3:+5814832 | MS.gene07021:CDS |
| AGAAGTTCATCTGGAGGATA+AGG | 0.468819 | 7.3:-5811553 | None:intergenic |
| TTGACAATAGGAAGGTTTGT+TGG | 0.470136 | 7.3:-5812147 | None:intergenic |
| AAAGACCACTCTTGTGGAGT+TGG | 0.471472 | 7.3:+5812014 | MS.gene07021:CDS |
| TGGTAGCCTTGAATTAGAAA+TGG | 0.472836 | 7.3:+5813787 | MS.gene07021:CDS |
| GTAGTCAAACTTGGGATTTG+TGG | 0.473180 | 7.3:+5814778 | MS.gene07021:CDS |
| TGCTTTCTTTCCATATAGAT+GGG | 0.474314 | 7.3:+5811663 | MS.gene07021:CDS |
| TTTGTTCCATGAGTTGATCC+CGG | 0.480126 | 7.3:-5813523 | None:intergenic |
| AAGACCACTCTTGTGGAGTT+GGG | 0.480183 | 7.3:+5812015 | MS.gene07021:CDS |
| ACAAAATAAATGAGTTCGAC+AGG | 0.487975 | 7.3:-5811631 | None:intergenic |
| TCTATCATAACCCTCTGCTC+TGG | 0.492566 | 7.3:-5813692 | None:intergenic |
| GTTGGGTAGGACTTTAGGAT+TGG | 0.493614 | 7.3:+5812032 | MS.gene07021:CDS |
| TGGAGGAGTCCATGCGAGCC+CGG | 0.494071 | 7.3:+5813504 | MS.gene07021:CDS |
| TGTGGTATACGCATAGCTCT+CGG | 0.503245 | 7.3:-5812186 | None:intergenic |
| GAACCACTGCTAGATCGAAC+AGG | 0.510532 | 7.3:-5814520 | None:intergenic |
| GGAGGAGTCCATGCGAGCCC+GGG | 0.516805 | 7.3:+5813505 | MS.gene07021:CDS |
| GTTCTTAAGGAACAACTCAC+GGG | 0.520997 | 7.3:-5811875 | None:intergenic |
| AACCAGAATCCTTACAGGAT+TGG | 0.521860 | 7.3:+5814121 | MS.gene07021:CDS |
| TTCAGATTTGTAAATCTCAT+GGG | 0.524035 | 7.3:+5814700 | MS.gene07021:intron |
| TCTGCTTGCAGCTTGATGAT+CGG | 0.525516 | 7.3:-5814815 | None:intergenic |
| AGGAGGTCGCCAATCCTGTA+AGG | 0.525729 | 7.3:-5814130 | None:intergenic |
| AAATGACCATCACTTGATGC+TGG | 0.529879 | 7.3:-5814162 | None:intergenic |
| GGAAGAGCTTGATAGGGAGA+TGG | 0.530026 | 7.3:+5811903 | MS.gene07021:CDS |
| CTACATTTGTAGTCAAACTT+GGG | 0.530312 | 7.3:+5814770 | MS.gene07021:CDS |
| GTGGTATACGCATAGCTCTC+GGG | 0.531017 | 7.3:-5812185 | None:intergenic |
| TGTTCTTAAGGAACAACTCA+CGG | 0.533686 | 7.3:-5811876 | None:intergenic |
| GATGGGACTTATTCTTACTC+AGG | 0.538781 | 7.3:+5811921 | MS.gene07021:CDS |
| ATGGGTTCTTATGCAGTTTG+GGG | 0.539955 | 7.3:+5811681 | MS.gene07021:CDS |
| TTAACTTATCATGTACAAGT+TGG | 0.540061 | 7.3:+5812114 | MS.gene07021:CDS |
| GATCTGTCCCGACTGGAAGA+TGG | 0.542916 | 7.3:+5813767 | MS.gene07021:CDS |
| TTACTCAATGATGACGACAT+AGG | 0.543430 | 7.3:+5814883 | MS.gene07021:CDS |
| AGGGGCAAGAATTAAAGTAA+TGG | 0.544261 | 7.3:-5813977 | None:intergenic |
| ACTCTGAGACTGAGTAAACT+TGG | 0.544636 | 7.3:-5814494 | None:intergenic |
| TCATTTCTATATACGAGTCC+AGG | 0.548157 | 7.3:+5814179 | MS.gene07021:CDS |
| GAAGAGCTTGATAGGGAGAT+GGG | 0.548570 | 7.3:+5811904 | MS.gene07021:CDS |
| CAATGCTGTCAAATATACTA+AGG | 0.548729 | 7.3:+5814065 | MS.gene07021:CDS |
| CATGGGTGGGCACATATGGA+TGG | 0.549664 | 7.3:+5814717 | MS.gene07021:CDS |
| GCGAGCCCGGGATCAACTCA+TGG | 0.550447 | 7.3:+5813517 | MS.gene07021:CDS |
| CTGAACTGAATCCAGAGCAG+AGG | 0.550673 | 7.3:+5813681 | MS.gene07021:CDS |
| AAGGCTACCATCTTCCAGTC+GGG | 0.554665 | 7.3:-5813774 | None:intergenic |
| CAAAATAGCAGCATGTGAAA+GGG | 0.558668 | 7.3:-5813483 | None:intergenic |
| CTTGATGCTGGATAAAACTC+AGG | 0.561674 | 7.3:-5814150 | None:intergenic |
| CAGGTTAAGGATTCTGGATG+TGG | 0.561926 | 7.3:+5814439 | MS.gene07021:intron |
| CTTGCAGCTTGATGATCGGA+TGG | 0.567335 | 7.3:-5814811 | None:intergenic |
| CAAGGCGGAAGAGCTTGATA+GGG | 0.569408 | 7.3:+5811897 | MS.gene07021:CDS |
| TGGCATGAGTAGGTAGATCA+GGG | 0.573826 | 7.3:-5813996 | None:intergenic |
| AGATTTGTAAATCTCATGGG+TGG | 0.574861 | 7.3:+5814703 | MS.gene07021:intron |
| ACGTTGCCTTAGATTTAGCT+CGG | 0.574999 | 7.3:+5813546 | MS.gene07021:CDS |
| TGCTGTCAAATATACTAAGG+AGG | 0.577420 | 7.3:+5814068 | MS.gene07021:CDS |
| GCTGTCAAATATACTAAGGA+GGG | 0.577474 | 7.3:+5814069 | MS.gene07021:CDS |
| TATTCTAAAGACCACTCTTG+TGG | 0.580698 | 7.3:+5812008 | MS.gene07021:CDS |
| GTAAACTTGGTAAAGAGATG+TGG | 0.583173 | 7.3:-5814481 | None:intergenic |
| GCTAGGATAAGACCTCTTGT+CGG | 0.586111 | 7.3:+5812222 | MS.gene07021:CDS |
| TGTTCTAGATCTGTCCCGAC+TGG | 0.586169 | 7.3:+5813760 | MS.gene07021:CDS |
| CACACACTTGTCCACTTGCT+AGG | 0.588144 | 7.3:+5812205 | MS.gene07021:CDS |
| TTTCATGATTCATGACTGCA+AGG | 0.589191 | 7.3:-5813607 | None:intergenic |
| CCACTCTTGTGGAGTTGGGT+AGG | 0.594476 | 7.3:+5812019 | MS.gene07021:CDS |
| GATTTGTAAATCTCATGGGT+GGG | 0.596709 | 7.3:+5814704 | MS.gene07021:intron |
| AGACTTCATTGACAATAGGA+AGG | 0.597850 | 7.3:-5812155 | None:intergenic |
| GTAAGTGCTTAAATCTAGCA+AGG | 0.598885 | 7.3:-5814864 | None:intergenic |
| CAAGGCTACCATCTTCCAGT+CGG | 0.599285 | 7.3:-5813775 | None:intergenic |
| TGAGTTGTTCCTTAAGAACA+AGG | 0.610418 | 7.3:+5811879 | MS.gene07021:CDS |
| GCACATATGGATGGAGAGCG+AGG | 0.610844 | 7.3:+5814726 | MS.gene07021:CDS |
| GGCACATATCTTCCGACAAG+AGG | 0.613814 | 7.3:-5812234 | None:intergenic |
| TGAACTGAATCCAGAGCAGA+GGG | 0.614850 | 7.3:+5813682 | MS.gene07021:CDS |
| AAGAGATGTGGAATATCTTG+TGG | 0.615014 | 7.3:-5814469 | None:intergenic |
| AGAGGTCTTATCCTAGCAAG+TGG | 0.615685 | 7.3:-5812216 | None:intergenic |
| TCATCACCGATGGCATGAGT+AGG | 0.616501 | 7.3:-5814006 | None:intergenic |
| CTTAGATTTAGCTCGGCGAG+AGG | 0.619358 | 7.3:+5813553 | MS.gene07021:CDS |
| AGCACACGACACTTTAGCGA+TGG | 0.621416 | 7.3:-5811788 | None:intergenic |
| GATCATCAAGCTGCAAGCAG+AGG | 0.631663 | 7.3:+5814817 | MS.gene07021:CDS |
| CGCAAGTGCGATTAGAACGT+CGG | 0.632134 | 7.3:-5811596 | None:intergenic |
| CAAGCATATAGTGGAAGTGG+AGG | 0.635632 | 7.3:+5814841 | MS.gene07021:CDS |
| ATGCCATCGGTGATGAAAAG+CGG | 0.635694 | 7.3:+5814013 | MS.gene07021:CDS |
| TGTGCCACCTGAAGTTGTTG+CGG | 0.636371 | 7.3:+5812251 | MS.gene07021:CDS |
| ATGAACAAGCATAAGTGCAG+TGG | 0.643228 | 7.3:-5811824 | None:intergenic |
| CCTACCCAACTCCACAAGAG+TGG | 0.646184 | 7.3:-5812019 | None:intergenic |
| GATCTACCTACTCATGCCAT+CGG | 0.647848 | 7.3:+5814000 | MS.gene07021:CDS |
| CCTCTCCCAAAACACCATGA+AGG | 0.651300 | 7.3:-5813820 | None:intergenic |
| CACATATGGATGGAGAGCGA+GGG | 0.654671 | 7.3:+5814727 | MS.gene07021:CDS |
| GGACCTGTTCGATCTAGCAG+TGG | 0.657911 | 7.3:+5814517 | MS.gene07021:CDS |
| CGAACCGCAACAACTTCAGG+TGG | 0.664993 | 7.3:-5812255 | None:intergenic |
| CTGTGGATGCCATCAAGAAG+TGG | 0.665478 | 7.3:+5812066 | MS.gene07021:CDS |
| TTGACAAGAAGTTCATCTGG+AGG | 0.684589 | 7.3:-5811559 | None:intergenic |
| GATGCTGGATAAAACTCAGG+AGG | 0.685050 | 7.3:-5814147 | None:intergenic |
| CTAGCAAGTGGACAAGTGTG+TGG | 0.685475 | 7.3:-5812204 | None:intergenic |
| AATGCTATAATTGCATGCAT+CGG | 0.690508 | 7.3:-5813638 | None:intergenic |
| GGCATGAGTAGGTAGATCAG+GGG | 0.696928 | 7.3:-5813995 | None:intergenic |
| AAGTTTACTCAGTCTCAGAG+TGG | 0.708425 | 7.3:+5814496 | MS.gene07021:CDS |
| GTTGTTCCTTAAGAACAAGG+CGG | 0.762407 | 7.3:+5811882 | MS.gene07021:CDS |
| GATTGGAGGAATGTGCACTG+TGG | 0.783064 | 7.3:+5812049 | MS.gene07021:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTGATTTCTTTTATTTTAT+TGG | + | chr7.3:5812437-5812456 | MS.gene07021:intron | 10.0% |
| !! | AATAGTTGAAAATTAGGAAA+TGG | + | chr7.3:5812621-5812640 | MS.gene07021:intron | 20.0% |
| !! | AATTCAATCACATTAACATA+TGG | - | chr7.3:5814241-5814260 | None:intergenic | 20.0% |
| !! | AATTTCAAACACAGTTAATA+TGG | - | chr7.3:5813287-5813306 | None:intergenic | 20.0% |
| !! | CAAATTTCCAAATTAATGAT+TGG | + | chr7.3:5812298-5812317 | MS.gene07021:intron | 20.0% |
| !! | GTATTAAATACAAATATCAC+AGG | - | chr7.3:5812829-5812848 | None:intergenic | 20.0% |
| !! | TTAATATGCATTTCACATAA+GGG | - | chr7.3:5814623-5814642 | None:intergenic | 20.0% |
| !!! | AAACTTTTCATTCAATTGTA+TGG | + | chr7.3:5813225-5813244 | MS.gene07021:intron | 20.0% |
| !!! | AAAGTTTCAGGTATTTAATT+TGG | - | chr7.3:5813212-5813231 | None:intergenic | 20.0% |
| ! | AAATAACTATAAAGCCCAAA+TGG | - | chr7.3:5812661-5812680 | None:intergenic | 25.0% |
| ! | AAATTTACAACAAATGTGTG+TGG | + | chr7.3:5813127-5813146 | MS.gene07021:intron | 25.0% |
| ! | AAATTTGACAAATGTAGAAG+CGG | - | chr7.3:5812285-5812304 | None:intergenic | 25.0% |
| ! | AAGTCGATAACATAATGAAA+AGG | - | chr7.3:5814341-5814360 | None:intergenic | 25.0% |
| ! | AATAGAAAACAACGGAAATA+CGG | - | chr7.3:5812494-5812513 | None:intergenic | 25.0% |
| ! | AATTTACAACAAATGTGTGT+GGG | + | chr7.3:5813128-5813147 | MS.gene07021:intron | 25.0% |
| ! | ACAATTGAATGAAAAGTTTC+AGG | - | chr7.3:5813224-5813243 | None:intergenic | 25.0% |
| ! | ACTAAATTTAAGAACGAGAT+TGG | + | chr7.3:5813015-5813034 | MS.gene07021:intron | 25.0% |
| ! | AGAAAAGGAATAGAAAACAA+CGG | - | chr7.3:5812502-5812521 | None:intergenic | 25.0% |
| ! | ATACGGAATAGAAAATATTC+AGG | - | chr7.3:5812477-5812496 | None:intergenic | 25.0% |
| ! | ATTCAGATTTGTAAATCTCA+TGG | + | chr7.3:5814699-5814718 | MS.gene07021:intron | 25.0% |
| ! | CAACTGTTAGAAATTAATCT+AGG | + | chr7.3:5814371-5814390 | MS.gene07021:intron | 25.0% |
| ! | CTTAAGTAAAGAACCATATT+AGG | + | chr7.3:5812722-5812741 | MS.gene07021:intron | 25.0% |
| ! | GAATAAAACACTTAAAAGTC+AGG | - | chr7.3:5813155-5813174 | None:intergenic | 25.0% |
| ! | GCATAGAATAGTTGAAAATT+AGG | + | chr7.3:5812615-5812634 | MS.gene07021:intron | 25.0% |
| ! | GTTAATATGCATTTCACATA+AGG | - | chr7.3:5814624-5814643 | None:intergenic | 25.0% |
| ! | GTTAATGTGATTGAATTCTT+GGG | + | chr7.3:5814244-5814263 | MS.gene07021:intron | 25.0% |
| ! | GTTTAAGCAATCAAAAGAAA+AGG | - | chr7.3:5812517-5812536 | None:intergenic | 25.0% |
| ! | TACGGAATAGAAAATATTCA+GGG | - | chr7.3:5812476-5812495 | None:intergenic | 25.0% |
| ! | TGTTAATGTGATTGAATTCT+TGG | + | chr7.3:5814243-5814262 | MS.gene07021:intron | 25.0% |
| ! | TTAAAGTATGAGAAAGTTGT+AGG | - | chr7.3:5812098-5812117 | None:intergenic | 25.0% |
| ! | TTAACTTATCATGTACAAGT+TGG | + | chr7.3:5812114-5812133 | MS.gene07021:CDS | 25.0% |
| ! | TTCAGATTTGTAAATCTCAT+GGG | + | chr7.3:5814700-5814719 | MS.gene07021:intron | 25.0% |
| !! | ATTGAAGAGTAGTAATGTTT+TGG | + | chr7.3:5813721-5813740 | MS.gene07021:CDS | 25.0% |
| !! | CAACTCATTTTATAAATCTG+TGG | + | chr7.3:5811725-5811744 | MS.gene07021:CDS | 25.0% |
| !!! | GGTATTTAATTTGGTCTTTT+CGG | - | chr7.3:5813203-5813222 | None:intergenic | 25.0% |
| !!! | TTTTTGCCATTTCTAATTCA+AGG | - | chr7.3:5813796-5813815 | None:intergenic | 25.0% |
| AAGAACGAGATTGGAAAAAT+GGG | + | chr7.3:5813024-5813043 | MS.gene07021:intron | 30.0% | |
| AATGCTATAATTGCATGCAT+CGG | - | chr7.3:5813641-5813660 | None:intergenic | 30.0% | |
| ACAAAATAAATGAGTTCGAC+AGG | - | chr7.3:5811634-5811653 | None:intergenic | 30.0% | |
| ACTAGCTATTTGTAAAAGGT+AGG | + | chr7.3:5814552-5814571 | MS.gene07021:intron | 30.0% | |
| ATATCAGCACTAGAAAATGT+TGG | - | chr7.3:5813333-5813352 | None:intergenic | 30.0% | |
| ATTTCACATAAGGGCAATAA+TGG | - | chr7.3:5814614-5814633 | None:intergenic | 30.0% | |
| CAATACATAAATGCTGTTCA+TGG | - | chr7.3:5813894-5813913 | None:intergenic | 30.0% | |
| CAATGCTGTCAAATATACTA+AGG | + | chr7.3:5814065-5814084 | MS.gene07021:CDS | 30.0% | |
| CTACATTTGTAGTCAAACTT+GGG | + | chr7.3:5814770-5814789 | MS.gene07021:CDS | 30.0% | |
| CTAGCTATTTGTAAAAGGTA+GGG | + | chr7.3:5814553-5814572 | MS.gene07021:intron | 30.0% | |
| GAAAAGAAAACGACATAAGA+TGG | - | chr7.3:5812900-5812919 | None:intergenic | 30.0% | |
| GAAAAGGTAGAGATATCTTT+GGG | - | chr7.3:5814325-5814344 | None:intergenic | 30.0% | |
| GGCAAAAAGTTATGCAATTA+TGG | + | chr7.3:5812332-5812351 | MS.gene07021:intron | 30.0% | |
| TAAGAACGAGATTGGAAAAA+TGG | + | chr7.3:5813023-5813042 | MS.gene07021:intron | 30.0% | |
| TGAAAAGGTAGAGATATCTT+TGG | - | chr7.3:5814326-5814345 | None:intergenic | 30.0% | |
| TGCTTTCTTTCCATATAGAT+GGG | + | chr7.3:5811663-5811682 | MS.gene07021:CDS | 30.0% | |
| ! | AAATCAAAATTAGACTGGCT+CGG | - | chr7.3:5812937-5812956 | None:intergenic | 30.0% |
| ! | AACTAAATGGATTCAGCATA+CGG | - | chr7.3:5813444-5813463 | None:intergenic | 30.0% |
| ! | AATCCATTTAGTTTCCATAC+AGG | + | chr7.3:5813451-5813470 | MS.gene07021:intron | 30.0% |
| ! | CATTCAATTGTATGGCTTTT+AGG | + | chr7.3:5813233-5813252 | MS.gene07021:intron | 30.0% |
| ! | TGCTTTTCTATTGTTAATGC+AGG | + | chr7.3:5813912-5813931 | MS.gene07021:intron | 30.0% |
| ! | TTTTGGCCATTGAAGATATA+TGG | + | chr7.3:5812954-5812973 | MS.gene07021:intron | 30.0% |
| !! | GAATGTTGACTCATGAAATT+AGG | + | chr7.3:5811965-5811984 | MS.gene07021:CDS | 30.0% |
| !! | TAATTTGGTCTTTTCGGATT+AGG | - | chr7.3:5813197-5813216 | None:intergenic | 30.0% |
| !! | TAGTTATTTCTCAACCATCA+AGG | + | chr7.3:5812672-5812691 | MS.gene07021:intron | 30.0% |
| !! | TTGGACTAGCTATTTGTAAA+AGG | + | chr7.3:5814548-5814567 | MS.gene07021:CDS | 30.0% |
| !!! | AACATTTTCTAGTGCTGATA+TGG | + | chr7.3:5813332-5813351 | MS.gene07021:intron | 30.0% |
| !!! | AGCCAGTCTAATTTTGATTT+TGG | + | chr7.3:5812937-5812956 | MS.gene07021:intron | 30.0% |
| !!! | AGTTTTTTCACAGATGCTAT+AGG | - | chr7.3:5813955-5813974 | None:intergenic | 30.0% |
| AACCATATTAGGTATGCATG+TGG | + | chr7.3:5812733-5812752 | MS.gene07021:intron | 35.0% | |
| AAGAGATGTGGAATATCTTG+TGG | - | chr7.3:5814472-5814491 | None:intergenic | 35.0% | |
| AATAAGTGGCTAAAAAAGGG+AGG | + | chr7.3:5812782-5812801 | MS.gene07021:intron | 35.0% | |
| ACCATATTAGGTATGCATGT+GGG | + | chr7.3:5812734-5812753 | MS.gene07021:intron | 35.0% | |
| AGAACGAGATTGGAAAAATG+GGG | + | chr7.3:5813025-5813044 | MS.gene07021:intron | 35.0% | |
| AGACTTCATTGACAATAGGA+AGG | - | chr7.3:5812158-5812177 | None:intergenic | 35.0% | |
| AGATTTGTAAATCTCATGGG+TGG | + | chr7.3:5814703-5814722 | MS.gene07021:intron | 35.0% | |
| AGGAAATGGCTATCAATCAT+TGG | + | chr7.3:5812635-5812654 | MS.gene07021:intron | 35.0% | |
| AGGGGCAAGAATTAAAGTAA+TGG | - | chr7.3:5813980-5813999 | None:intergenic | 35.0% | |
| ATAAGTGGCTAAAAAAGGGA+GGG | + | chr7.3:5812783-5812802 | MS.gene07021:intron | 35.0% | |
| ATGGCAAAAATCAACCTTCA+TGG | + | chr7.3:5813806-5813825 | MS.gene07021:CDS | 35.0% | |
| ATGTGTAAACTATATCGCAG+AGG | - | chr7.3:5812872-5812891 | None:intergenic | 35.0% | |
| ATTCTTACTCAGGAAGAAAC+CGG | + | chr7.3:5811931-5811950 | MS.gene07021:CDS | 35.0% | |
| CAAAATAGCAGCATGTGAAA+GGG | - | chr7.3:5813486-5813505 | None:intergenic | 35.0% | |
| CCCAATAAGTGGCTAAAAAA+GGG | + | chr7.3:5812779-5812798 | MS.gene07021:intron | 35.0% | |
| CTACCTGTATGGAAACTAAA+TGG | - | chr7.3:5813457-5813476 | None:intergenic | 35.0% | |
| CTATCAATCATTGGCCATTT+GGG | + | chr7.3:5812644-5812663 | MS.gene07021:intron | 35.0% | |
| CTCAATATCAAGACTGAGAT+AGG | + | chr7.3:5812980-5812999 | MS.gene07021:intron | 35.0% | |
| CTGAAGACTTCATTGACAAT+AGG | - | chr7.3:5812162-5812181 | None:intergenic | 35.0% | |
| CTGCTTTCTTTCCATATAGA+TGG | + | chr7.3:5811662-5811681 | MS.gene07021:CDS | 35.0% | |
| CTTTCCTAGAAATGTAGGTA+TGG | - | chr7.3:5814300-5814319 | None:intergenic | 35.0% | |
| GATTTGTAAATCTCATGGGT+GGG | + | chr7.3:5814704-5814723 | MS.gene07021:intron | 35.0% | |
| GCTACATTTGTAGTCAAACT+TGG | + | chr7.3:5814769-5814788 | MS.gene07021:CDS | 35.0% | |
| GCTGTCAAATATACTAAGGA+GGG | + | chr7.3:5814069-5814088 | MS.gene07021:CDS | 35.0% | |
| GGCCAAAATCAAAATTAGAC+TGG | - | chr7.3:5812942-5812961 | None:intergenic | 35.0% | |
| GGGGCAAGAATTAAAGTAAT+GGG | - | chr7.3:5813979-5813998 | None:intergenic | 35.0% | |
| GGTTCTTTACTTAAGTCACT+AGG | - | chr7.3:5812717-5812736 | None:intergenic | 35.0% | |
| GTAAACTTGGTAAAGAGATG+TGG | - | chr7.3:5814484-5814503 | None:intergenic | 35.0% | |
| GTAAGTGCTTAAATCTAGCA+AGG | - | chr7.3:5814867-5814886 | None:intergenic | 35.0% | |
| TACTTGACAAGAAGTTCATC+TGG | - | chr7.3:5811565-5811584 | None:intergenic | 35.0% | |
| TATTCTGTCTTCTACCTTGA+TGG | - | chr7.3:5812689-5812708 | None:intergenic | 35.0% | |
| TCATCCATACCTACATTTCT+AGG | + | chr7.3:5814293-5814312 | MS.gene07021:intron | 35.0% | |
| TCATTTCTATATACGAGTCC+AGG | + | chr7.3:5814179-5814198 | MS.gene07021:CDS | 35.0% | |
| TCCCAATAAGTGGCTAAAAA+AGG | + | chr7.3:5812778-5812797 | MS.gene07021:intron | 35.0% | |
| TCTGCGATATAGTTTACACA+TGG | + | chr7.3:5812871-5812890 | MS.gene07021:intron | 35.0% | |
| TGAGTTGTTCCTTAAGAACA+AGG | + | chr7.3:5811879-5811898 | MS.gene07021:CDS | 35.0% | |
| TGCATAAGAACCCATCTATA+TGG | - | chr7.3:5811676-5811695 | None:intergenic | 35.0% | |
| TGCTGTCAAATATACTAAGG+AGG | + | chr7.3:5814068-5814087 | MS.gene07021:CDS | 35.0% | |
| TGTTCTTAAGGAACAACTCA+CGG | - | chr7.3:5811879-5811898 | None:intergenic | 35.0% | |
| TTGACAATAGGAAGGTTTGT+TGG | - | chr7.3:5812150-5812169 | None:intergenic | 35.0% | |
| TTTCATGATTCATGACTGCA+AGG | - | chr7.3:5813610-5813629 | None:intergenic | 35.0% | |
| ! | AATCAACCTTCATGGTGTTT+TGG | + | chr7.3:5813814-5813833 | MS.gene07021:CDS | 35.0% |
| ! | ACTTTCTAGCACTATCAGTA+GGG | - | chr7.3:5812368-5812387 | None:intergenic | 35.0% |
| ! | AGCATTGTCATCACTTCTTT+TGG | + | chr7.3:5813655-5813674 | MS.gene07021:CDS | 35.0% |
| ! | ATCAACCTTCATGGTGTTTT+GGG | + | chr7.3:5813815-5813834 | MS.gene07021:CDS | 35.0% |
| ! | CAGACACTTTTGAATGTTGT+GGG | + | chr7.3:5814042-5814061 | MS.gene07021:CDS | 35.0% |
| ! | TATTCTAAAGACCACTCTTG+TGG | + | chr7.3:5812008-5812027 | MS.gene07021:CDS | 35.0% |
| ! | TGGTAGCCTTGAATTAGAAA+TGG | + | chr7.3:5813787-5813806 | MS.gene07021:CDS | 35.0% |
| ! | TTACTCAATGATGACGACAT+AGG | + | chr7.3:5814883-5814902 | MS.gene07021:CDS | 35.0% |
| ! | TTTTATCCAGCATCAAGTGA+TGG | + | chr7.3:5814156-5814175 | MS.gene07021:CDS | 35.0% |
| !! | AAATTAGGAGCACTCTTGAT+AGG | + | chr7.3:5811980-5811999 | MS.gene07021:CDS | 35.0% |
| !! | ATGTTGGCGACATTTTGAAA+CGG | - | chr7.3:5813317-5813336 | None:intergenic | 35.0% |
| !! | CTATTGCTGTGAACTTGTTT+TGG | + | chr7.3:5812584-5812603 | MS.gene07021:intron | 35.0% |
| !! | GGTTTTAACACTCAACAGAT+CGG | - | chr7.3:5811857-5811876 | None:intergenic | 35.0% |
| !! | GTTTTAACACTCAACAGATC+GGG | - | chr7.3:5811856-5811875 | None:intergenic | 35.0% |
| !!! | CCCTTTTTTAGCCACTTATT+GGG | - | chr7.3:5812782-5812801 | None:intergenic | 35.0% |
| !!! | TCCCTTTTTTAGCCACTTAT+TGG | - | chr7.3:5812783-5812802 | None:intergenic | 35.0% |
| !!! | TGTGAACTTGTTTTGGAGTT+TGG | + | chr7.3:5812591-5812610 | MS.gene07021:intron | 35.0% |
| AAATGACCATCACTTGATGC+TGG | - | chr7.3:5814165-5814184 | None:intergenic | 40.0% | |
| AACCAGAATCCTTACAGGAT+TGG | + | chr7.3:5814121-5814140 | MS.gene07021:CDS | 40.0% | |
| AAGTTTACTCAGTCTCAGAG+TGG | + | chr7.3:5814496-5814515 | MS.gene07021:CDS | 40.0% | |
| AATCTGATGCAGATCTGTCT+AGG | + | chr7.3:5813102-5813121 | MS.gene07021:intron | 40.0% | |
| ACGTTGCCTTAGATTTAGCT+CGG | + | chr7.3:5813546-5813565 | MS.gene07021:CDS | 40.0% | |
| AGAAGTTCATCTGGAGGATA+AGG | - | chr7.3:5811556-5811575 | None:intergenic | 40.0% | |
| AGACTCAGAACAGAACTTAC+AGG | - | chr7.3:5812562-5812581 | None:intergenic | 40.0% | |
| AGGTTCAAACCACTTCTTGA+TGG | - | chr7.3:5812078-5812097 | None:intergenic | 40.0% | |
| ATCCTTAACCTGCACAAAGA+AGG | - | chr7.3:5814431-5814450 | None:intergenic | 40.0% | |
| ATCCTTCTTTGTGCAGGTTA+AGG | + | chr7.3:5814426-5814445 | MS.gene07021:intron | 40.0% | |
| ATGAACAAGCATAAGTGCAG+TGG | - | chr7.3:5811827-5811846 | None:intergenic | 40.0% | |
| ATGGGTTCTTATGCAGTTTG+GGG | + | chr7.3:5811681-5811700 | MS.gene07021:CDS | 40.0% | |
| CAACATTCTCACATGTCTTC+CGG | - | chr7.3:5811953-5811972 | None:intergenic | 40.0% | |
| CCAAAATAGCAGCATGTGAA+AGG | - | chr7.3:5813487-5813506 | None:intergenic | 40.0% | |
| CCATATTAGGTATGCATGTG+GGG | + | chr7.3:5812735-5812754 | MS.gene07021:intron | 40.0% | |
| CTGCACAAAGAAGGATGTTT+GGG | - | chr7.3:5814422-5814441 | None:intergenic | 40.0% | |
| CTTGATGCTGGATAAAACTC+AGG | - | chr7.3:5814153-5814172 | None:intergenic | 40.0% | |
| GAGCCACCATATATCTTCAA+TGG | - | chr7.3:5812963-5812982 | None:intergenic | 40.0% | |
| GATGGGACTTATTCTTACTC+AGG | + | chr7.3:5811921-5811940 | MS.gene07021:CDS | 40.0% | |
| GCTATCAATCATTGGCCATT+TGG | + | chr7.3:5812643-5812662 | MS.gene07021:intron | 40.0% | |
| GCTCAGGCCAATCATTAATT+TGG | - | chr7.3:5812308-5812327 | None:intergenic | 40.0% | |
| GTAGTCAAACTTGGGATTTG+TGG | + | chr7.3:5814778-5814797 | MS.gene07021:CDS | 40.0% | |
| GTTCTTAAGGAACAACTCAC+GGG | - | chr7.3:5811878-5811897 | None:intergenic | 40.0% | |
| GTTGTTCCTTAAGAACAAGG+CGG | + | chr7.3:5811882-5811901 | MS.gene07021:CDS | 40.0% | |
| TATCAAGACTGAGATAGGCT+CGG | + | chr7.3:5812985-5813004 | MS.gene07021:intron | 40.0% | |
| TGCAAAACCAGAATCCTTAC+AGG | + | chr7.3:5814116-5814135 | MS.gene07021:CDS | 40.0% | |
| TGCACAAAGAAGGATGTTTG+GGG | - | chr7.3:5814421-5814440 | None:intergenic | 40.0% | |
| TGGCCATTGAAGATATATGG+TGG | + | chr7.3:5812957-5812976 | MS.gene07021:intron | 40.0% | |
| TTGACAAGAAGTTCATCTGG+AGG | - | chr7.3:5811562-5811581 | None:intergenic | 40.0% | |
| TTTGTGCAGGTTAAGGATTC+TGG | + | chr7.3:5814433-5814452 | MS.gene07021:intron | 40.0% | |
| ! | AGATGGGTTCTTATGCAGTT+TGG | + | chr7.3:5811679-5811698 | MS.gene07021:CDS | 40.0% |
| ! | CACTTTCTAGCACTATCAGT+AGG | - | chr7.3:5812369-5812388 | None:intergenic | 40.0% |
| ! | CTACTGATAGTGCTAGAAAG+TGG | + | chr7.3:5812367-5812386 | MS.gene07021:intron | 40.0% |
| ! | GATGGGTTCTTATGCAGTTT+GGG | + | chr7.3:5811680-5811699 | MS.gene07021:CDS | 40.0% |
| ! | GCAGACACTTTTGAATGTTG+TGG | + | chr7.3:5814041-5814060 | MS.gene07021:CDS | 40.0% |
| ! | GGGGCTTTTATTGTTCTATG+TGG | + | chr7.3:5811700-5811719 | MS.gene07021:CDS | 40.0% |
| ! | TAAATGGATTCAGCATACGG+AGG | - | chr7.3:5813441-5813460 | None:intergenic | 40.0% |
| ! | TAACTTTTTGCCGAAAGCTC+AGG | - | chr7.3:5812324-5812343 | None:intergenic | 40.0% |
| !! | ACTCTGAGACTGAGTAAACT+TGG | - | chr7.3:5814497-5814516 | None:intergenic | 40.0% |
| !! | CCTTTCACATGCTGCTATTT+TGG | + | chr7.3:5813484-5813503 | MS.gene07021:CDS | 40.0% |
| !! | TAATGATTGGCCTGAGCTTT+CGG | + | chr7.3:5812311-5812330 | MS.gene07021:intron | 40.0% |
| !! | TTTGGTCTTTTCGGATTAGG+AGG | - | chr7.3:5813194-5813213 | None:intergenic | 40.0% |
| !! | TTTGTTCCATGAGTTGATCC+CGG | - | chr7.3:5813526-5813545 | None:intergenic | 40.0% |
| !!! | TTCACATGCTGCTATTTTGG+AGG | + | chr7.3:5813487-5813506 | MS.gene07021:CDS | 40.0% |
| AAAGACCACTCTTGTGGAGT+TGG | + | chr7.3:5812014-5812033 | MS.gene07021:CDS | 45.0% | |
| AAGACCACTCTTGTGGAGTT+GGG | + | chr7.3:5812015-5812034 | MS.gene07021:CDS | 45.0% | |
| ACGAGTCCAGGTTATGACTT+TGG | + | chr7.3:5814191-5814210 | MS.gene07021:intron | 45.0% | |
| AGCCACTTATTGGGATTCAG+CGG | - | chr7.3:5812773-5812792 | None:intergenic | 45.0% | |
| ATCAAGACTGAGATAGGCTC+GGG | + | chr7.3:5812986-5813005 | MS.gene07021:intron | 45.0% | |
| ATGCCATCGGTGATGAAAAG+CGG | + | chr7.3:5814013-5814032 | MS.gene07021:CDS | 45.0% | |
| ATGGCATGAGTAGGTAGATC+AGG | - | chr7.3:5814000-5814019 | None:intergenic | 45.0% | |
| CAGGTTAAGGATTCTGGATG+TGG | + | chr7.3:5814439-5814458 | MS.gene07021:intron | 45.0% | |
| CCAAACATCCTTCTTTGTGC+AGG | + | chr7.3:5814420-5814439 | MS.gene07021:intron | 45.0% | |
| CCCCACATGCATACCTAATA+TGG | - | chr7.3:5812738-5812757 | None:intergenic | 45.0% | |
| CCTGCACAAAGAAGGATGTT+TGG | - | chr7.3:5814423-5814442 | None:intergenic | 45.0% | |
| CTCCACTTCCACTATATGCT+TGG | - | chr7.3:5814843-5814862 | None:intergenic | 45.0% | |
| GAAGAGCTTGATAGGGAGAT+GGG | + | chr7.3:5811904-5811923 | MS.gene07021:CDS | 45.0% | |
| GAGATGCCAAAGTCATAACC+TGG | - | chr7.3:5814200-5814219 | None:intergenic | 45.0% | |
| GATCTACCTACTCATGCCAT+CGG | + | chr7.3:5814000-5814019 | MS.gene07021:CDS | 45.0% | |
| GATGCTGGATAAAACTCAGG+AGG | - | chr7.3:5814150-5814169 | None:intergenic | 45.0% | |
| GCTAGGATAAGACCTCTTGT+CGG | + | chr7.3:5812222-5812241 | MS.gene07021:CDS | 45.0% | |
| GGGCTCTTTCCTAGAAATGT+AGG | - | chr7.3:5814305-5814324 | None:intergenic | 45.0% | |
| TCTATCATAACCCTCTGCTC+TGG | - | chr7.3:5813695-5813714 | None:intergenic | 45.0% | |
| TGAACTGAATCCAGAGCAGA+GGG | + | chr7.3:5813682-5813701 | MS.gene07021:CDS | 45.0% | |
| TGGCATGAGTAGGTAGATCA+GGG | - | chr7.3:5813999-5814018 | None:intergenic | 45.0% | |
| TGTCGATGTTGTTGCAGATC+AGG | + | chr7.3:5812410-5812429 | MS.gene07021:intron | 45.0% | |
| TGTGGTATACGCATAGCTCT+CGG | - | chr7.3:5812189-5812208 | None:intergenic | 45.0% | |
| ! | AGAGGTCTTATCCTAGCAAG+TGG | - | chr7.3:5812219-5812238 | None:intergenic | 45.0% |
| ! | CAAGCATATAGTGGAAGTGG+AGG | + | chr7.3:5814841-5814860 | MS.gene07021:CDS | 45.0% |
| ! | TCTGCTTGCAGCTTGATGAT+CGG | - | chr7.3:5814818-5814837 | None:intergenic | 45.0% |
| !! | GGCAATAATGGTGACTTGCT+AGG | - | chr7.3:5814602-5814621 | None:intergenic | 45.0% |
| !! | GTTGGGTAGGACTTTAGGAT+TGG | + | chr7.3:5812032-5812051 | MS.gene07021:CDS | 45.0% |
| !! | TTGTTCCATGAGTTGATCCC+GGG | - | chr7.3:5813525-5813544 | None:intergenic | 45.0% |
| AAAGTGGCGAGACCATGAGT+TGG | + | chr7.3:5812383-5812402 | MS.gene07021:intron | 50.0% | |
| AAGGCTACCATCTTCCAGTC+GGG | - | chr7.3:5813777-5813796 | None:intergenic | 50.0% | |
| AAGGGCAACTGCTACCTGTA+TGG | - | chr7.3:5813468-5813487 | None:intergenic | 50.0% | |
| ACAAGGCGGAAGAGCTTGAT+AGG | + | chr7.3:5811896-5811915 | MS.gene07021:CDS | 50.0% | |
| ACCTGAAGTTGTTGCGGTTC+GGG | + | chr7.3:5812257-5812276 | MS.gene07021:CDS | 50.0% | |
| AGCACACGACACTTTAGCGA+TGG | - | chr7.3:5811791-5811810 | None:intergenic | 50.0% | |
| AGCAGAGGCCAAGCATATAG+TGG | + | chr7.3:5814832-5814851 | MS.gene07021:CDS | 50.0% | |
| ATCTCATGGGTGGGCACATA+TGG | + | chr7.3:5814713-5814732 | MS.gene07021:CDS | 50.0% | |
| CAAGGCGGAAGAGCTTGATA+GGG | + | chr7.3:5811897-5811916 | MS.gene07021:CDS | 50.0% | |
| CAAGGCTACCATCTTCCAGT+CGG | - | chr7.3:5813778-5813797 | None:intergenic | 50.0% | |
| CAATCATGTCCCCACATCTG+AGG | - | chr7.3:5813378-5813397 | None:intergenic | 50.0% | |
| CACACACTTGTCCACTTGCT+AGG | + | chr7.3:5812205-5812224 | MS.gene07021:CDS | 50.0% | |
| CACATATGGATGGAGAGCGA+GGG | + | chr7.3:5814727-5814746 | MS.gene07021:CDS | 50.0% | |
| CACCTGAAGTTGTTGCGGTT+CGG | + | chr7.3:5812256-5812275 | MS.gene07021:CDS | 50.0% | |
| CATCGACAAGCTCCAACTCA+TGG | - | chr7.3:5812398-5812417 | None:intergenic | 50.0% | |
| CCTCTCCCAAAACACCATGA+AGG | - | chr7.3:5813823-5813842 | None:intergenic | 50.0% | |
| CGCAAGTGCGATTAGAACGT+CGG | - | chr7.3:5811599-5811618 | None:intergenic | 50.0% | |
| CGCCAATCCTGTAAGGATTC+TGG | - | chr7.3:5814126-5814145 | None:intergenic | 50.0% | |
| CTAGCAAGTGGACAAGTGTG+TGG | - | chr7.3:5812207-5812226 | None:intergenic | 50.0% | |
| CTCACATGCACCTCAGATGT+GGG | + | chr7.3:5813365-5813384 | MS.gene07021:intron | 50.0% | |
| CTCTCGCCGAGCTAAATCTA+AGG | - | chr7.3:5813555-5813574 | None:intergenic | 50.0% | |
| CTGAACTGAATCCAGAGCAG+AGG | + | chr7.3:5813681-5813700 | MS.gene07021:CDS | 50.0% | |
| CTGTGGATGCCATCAAGAAG+TGG | + | chr7.3:5812066-5812085 | MS.gene07021:CDS | 50.0% | |
| GAACCACTGCTAGATCGAAC+AGG | - | chr7.3:5814523-5814542 | None:intergenic | 50.0% | |
| GATCATCAAGCTGCAAGCAG+AGG | + | chr7.3:5814817-5814836 | MS.gene07021:CDS | 50.0% | |
| GATTGGAGGAATGTGCACTG+TGG | + | chr7.3:5812049-5812068 | MS.gene07021:CDS | 50.0% | |
| GGAAGAGCTTGATAGGGAGA+TGG | + | chr7.3:5811903-5811922 | MS.gene07021:CDS | 50.0% | |
| GGCACATATCTTCCGACAAG+AGG | - | chr7.3:5812237-5812256 | None:intergenic | 50.0% | |
| GGCATGAGTAGGTAGATCAG+GGG | - | chr7.3:5813998-5814017 | None:intergenic | 50.0% | |
| GTGGAGTTGGGTAGGACTTT+AGG | + | chr7.3:5812027-5812046 | MS.gene07021:CDS | 50.0% | |
| GTGGTATACGCATAGCTCTC+GGG | - | chr7.3:5812188-5812207 | None:intergenic | 50.0% | |
| GTTCGATCTAGCAGTGGTTC+AGG | + | chr7.3:5814523-5814542 | MS.gene07021:CDS | 50.0% | |
| TCACATGCACCTCAGATGTG+GGG | + | chr7.3:5813366-5813385 | MS.gene07021:intron | 50.0% | |
| TCATCACCGATGGCATGAGT+AGG | - | chr7.3:5814009-5814028 | None:intergenic | 50.0% | |
| TCTAGCAGTGGTTCAGGTCT+TGG | + | chr7.3:5814529-5814548 | MS.gene07021:CDS | 50.0% | |
| TGTGCCACCTGAAGTTGTTG+CGG | + | chr7.3:5812251-5812270 | MS.gene07021:CDS | 50.0% | |
| ! | CTTAGATTTAGCTCGGCGAG+AGG | + | chr7.3:5813553-5813572 | MS.gene07021:CDS | 50.0% |
| ! | CTTGCAGCTTGATGATCGGA+TGG | - | chr7.3:5814814-5814833 | None:intergenic | 50.0% |
| ! | GCTCTTCCGCCTTGTTCTTA+AGG | - | chr7.3:5811891-5811910 | None:intergenic | 50.0% |
| ! | GGCCAAGCATATAGTGGAAG+TGG | + | chr7.3:5814838-5814857 | MS.gene07021:CDS | 50.0% |
| ! | GTTTGGGGTCAGTCATGAGA+TGG | - | chr7.3:5814406-5814425 | None:intergenic | 50.0% |
| ! | TGTTCTAGATCTGTCCCGAC+TGG | + | chr7.3:5813760-5813779 | MS.gene07021:CDS | 50.0% |
| !! | GGGTAGGACTTTAGGATTGG+AGG | + | chr7.3:5812035-5812054 | MS.gene07021:CDS | 50.0% |
| !!! | AAGCCGCTTTTCATCACCGA+TGG | - | chr7.3:5814019-5814038 | None:intergenic | 50.0% |
| !!! | CCTTCATGGTGTTTTGGGAG+AGG | + | chr7.3:5813820-5813839 | MS.gene07021:CDS | 50.0% |
| ACCCGAACCGCAACAACTTC+AGG | - | chr7.3:5812261-5812280 | None:intergenic | 55.0% | |
| AGGAGGTCGCCAATCCTGTA+AGG | - | chr7.3:5814133-5814152 | None:intergenic | 55.0% | |
| CATGGGTGGGCACATATGGA+TGG | + | chr7.3:5814717-5814736 | MS.gene07021:CDS | 55.0% | |
| CCACTCTTGTGGAGTTGGGT+AGG | + | chr7.3:5812019-5812038 | MS.gene07021:CDS | 55.0% | |
| CCTACCCAACTCCACAAGAG+TGG | - | chr7.3:5812022-5812041 | None:intergenic | 55.0% | |
| CCTCACATGCACCTCAGATG+TGG | + | chr7.3:5813364-5813383 | MS.gene07021:intron | 55.0% | |
| CGAACCGCAACAACTTCAGG+TGG | - | chr7.3:5812258-5812277 | None:intergenic | 55.0% | |
| GAGAGCGAGGGTCACGATAA+AGG | + | chr7.3:5814739-5814758 | MS.gene07021:CDS | 55.0% | |
| GATCTGTCCCGACTGGAAGA+TGG | + | chr7.3:5813767-5813786 | MS.gene07021:CDS | 55.0% | |
| GCACATATGGATGGAGAGCG+AGG | + | chr7.3:5814726-5814745 | MS.gene07021:CDS | 55.0% | |
| GGACCTGTTCGATCTAGCAG+TGG | + | chr7.3:5814517-5814536 | MS.gene07021:CDS | 55.0% | |
| GGCCGCTGAATCCCAATAAG+TGG | + | chr7.3:5812768-5812787 | MS.gene07021:intron | 55.0% | |
| GTGGCTAAAAAAGGGAGGGC+AGG | + | chr7.3:5812787-5812806 | MS.gene07021:intron | 55.0% | |
| ! | AGGAGGCATGTGCAGGCAAA+GGG | - | chr7.3:5813177-5813196 | None:intergenic | 55.0% |
| ! | CCACATCTGAGGTGCATGTG+AGG | - | chr7.3:5813367-5813386 | None:intergenic | 55.0% |
| ! | TAGGAGGCATGTGCAGGCAA+AGG | - | chr7.3:5813178-5813197 | None:intergenic | 55.0% |
| ! | TCGGATTAGGAGGCATGTGC+AGG | - | chr7.3:5813184-5813203 | None:intergenic | 55.0% |
| AGCTCGGCGAGAGGCTGAAA+TGG | + | chr7.3:5813562-5813581 | MS.gene07021:CDS | 60.0% | |
| TGCATGTGGGGTATGCGCTG+AGG | + | chr7.3:5812747-5812766 | MS.gene07021:intron | 60.0% | |
| GCGAGCCCGGGATCAACTCA+TGG | + | chr7.3:5813517-5813536 | MS.gene07021:CDS | 65.0% | |
| TGGAGGAGTCCATGCGAGCC+CGG | + | chr7.3:5813504-5813523 | MS.gene07021:CDS | 65.0% | |
| ! | GAGTTGATCCCGGGCTCGCA+TGG | - | chr7.3:5813516-5813535 | None:intergenic | 65.0% |
| GGAGGAGTCCATGCGAGCCC+GGG | + | chr7.3:5813505-5813524 | MS.gene07021:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 5811526 | 5814939 | 5811526 | ID=MS.gene07021 |
| chr7.3 | mRNA | 5811526 | 5814939 | 5811526 | ID=MS.gene07021.t1;Parent=MS.gene07021 |
| chr7.3 | exon | 5811526 | 5812278 | 5811526 | ID=MS.gene07021.t1.exon1;Parent=MS.gene07021.t1 |
| chr7.3 | CDS | 5811526 | 5812278 | 5811526 | ID=cds.MS.gene07021.t1;Parent=MS.gene07021.t1 |
| chr7.3 | exon | 5813473 | 5813841 | 5813473 | ID=MS.gene07021.t1.exon2;Parent=MS.gene07021.t1 |
| chr7.3 | CDS | 5813473 | 5813841 | 5813473 | ID=cds.MS.gene07021.t1;Parent=MS.gene07021.t1 |
| chr7.3 | exon | 5813934 | 5814200 | 5813934 | ID=MS.gene07021.t1.exon3;Parent=MS.gene07021.t1 |
| chr7.3 | CDS | 5813934 | 5814200 | 5813934 | ID=cds.MS.gene07021.t1;Parent=MS.gene07021.t1 |
| chr7.3 | exon | 5814442 | 5814569 | 5814442 | ID=MS.gene07021.t1.exon4;Parent=MS.gene07021.t1 |
| chr7.3 | CDS | 5814442 | 5814569 | 5814442 | ID=cds.MS.gene07021.t1;Parent=MS.gene07021.t1 |
| chr7.3 | exon | 5814705 | 5814939 | 5814705 | ID=MS.gene07021.t1.exon5;Parent=MS.gene07021.t1 |
| chr7.3 | CDS | 5814705 | 5814939 | 5814705 | ID=cds.MS.gene07021.t1;Parent=MS.gene07021.t1 |
| Gene Sequence |
| Protein sequence |
