Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070233.t1 | XP_003594754.1 | 80.4 | 556 | 64 | 5 | 1 | 523 | 44 | 587 | 9.40E-248 | 865.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070233.t1 | Q8GXW1 | 31.9 | 376 | 237 | 7 | 149 | 521 | 186 | 545 | 3.3e-47 | 191.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070233.t1 | A2Q2X8 | 80.4 | 556 | 64 | 5 | 1 | 523 | 44 | 587 | 6.8e-248 | 865.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene058226 | MS.gene070233 | 0.898675 | 4.20E-77 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 74 sgRNAs with CRISPR-Local
Find 94 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTCATCCAGTTAATGATTT+TGG | 0.114608 | 2.2:+54666213 | MS.gene070233:CDS |
| AACCATTACTATAGGGTTTA+TGG | 0.150240 | 2.2:-54667123 | None:intergenic |
| GAGTCTCTTTGCTCTAATTT+TGG | 0.217371 | 2.2:+54665925 | MS.gene070233:CDS |
| CTTCAAAGTGTCTATGTTTC+CGG | 0.238242 | 2.2:-54666880 | None:intergenic |
| CTTGATATGATCCTTGTTCT+TGG | 0.265549 | 2.2:-54665999 | None:intergenic |
| CAAACAGAAACAGAGTTAAT+TGG | 0.268686 | 2.2:-54667524 | None:intergenic |
| GTTCTTGGTGATGATACTTT+AGG | 0.270808 | 2.2:-54665984 | None:intergenic |
| TAATGAACCACGCGCTTAAC+GGG | 0.281787 | 2.2:-54666522 | None:intergenic |
| TTGTCCATTGTAACCCTTTA+CGG | 0.295916 | 2.2:-54666788 | None:intergenic |
| ATAATGAACCACGCGCTTAA+CGG | 0.336606 | 2.2:-54666523 | None:intergenic |
| CAATTAACTCTGTTTCTGTT+TGG | 0.337936 | 2.2:+54667525 | MS.gene070233:CDS |
| TCGATTGAAGTGCTTGCATT+AGG | 0.355406 | 2.2:-54666812 | None:intergenic |
| CCGTGACAACCATTACTATA+GGG | 0.362305 | 2.2:-54667130 | None:intergenic |
| ATCAAACCAAAATCATTAAC+TGG | 0.365703 | 2.2:-54666219 | None:intergenic |
| AAGAAGTTTGGTAGAATTGT+TGG | 0.375164 | 2.2:-54666119 | None:intergenic |
| ACCTCTTGAGGATCAAATAA+AGG | 0.383647 | 2.2:-54666627 | None:intergenic |
| GTTGATATATTGAAGAACTA+TGG | 0.396369 | 2.2:+54666150 | MS.gene070233:CDS |
| AATGGTCATTGTCTTCTTGT+TGG | 0.397166 | 2.2:+54667488 | MS.gene070233:CDS |
| GACAAACAATATGCAAAAGA+TGG | 0.402851 | 2.2:+54666602 | MS.gene070233:CDS |
| CAACCGGTGCTAAAGAAGTT+TGG | 0.409389 | 2.2:-54666131 | None:intergenic |
| TCTTGCACATTTGATATGAA+TGG | 0.412387 | 2.2:+54667470 | MS.gene070233:CDS |
| CAAAGAATCGACAAAGAAAC+AGG | 0.414068 | 2.2:+54666564 | MS.gene070233:CDS |
| GTCTTTGTATCAAGCTGAAT+TGG | 0.419059 | 2.2:+54667421 | MS.gene070233:CDS |
| GAAGATCTAGGAGACTATAA+TGG | 0.427527 | 2.2:+54665898 | MS.gene070233:CDS |
| GAGTCTTTATCTTCAAAGAA+AGG | 0.431602 | 2.2:+54666495 | MS.gene070233:CDS |
| GATTCTTTGTTGAAGAGCTT+CGG | 0.433882 | 2.2:-54666550 | None:intergenic |
| TCTTCGTCGCAATCTGCATC+AGG | 0.438613 | 2.2:+54666321 | MS.gene070233:CDS |
| CTCTCATGATTGTTTCAAGT+TGG | 0.456214 | 2.2:-54667091 | None:intergenic |
| AGGAATATTGTGGCTGAAGA+AGG | 0.463268 | 2.2:+54667308 | MS.gene070233:CDS |
| TAGTTCTTCAATATATCAAC+CGG | 0.467500 | 2.2:-54666147 | None:intergenic |
| CAAAATCATTAACTGGATGA+AGG | 0.470878 | 2.2:-54666212 | None:intergenic |
| GAAGATATCATGAAGATAGC+TGG | 0.473521 | 2.2:+54666276 | MS.gene070233:CDS |
| TCCGTGACAACCATTACTAT+AGG | 0.473792 | 2.2:-54667131 | None:intergenic |
| TGTCTTCTTGTTGGATGGAA+GGG | 0.477569 | 2.2:+54667497 | MS.gene070233:CDS |
| ATTCGATACAATTATTGTAT+CGG | 0.477780 | 2.2:+54666968 | MS.gene070233:CDS |
| AGGAAATCATCTTCTTGTGA+TGG | 0.485850 | 2.2:-54665964 | None:intergenic |
| AGATCCTTGGTTACCTCTTG+AGG | 0.485987 | 2.2:-54666639 | None:intergenic |
| TTGATCTCGAAATCCGTAAA+GGG | 0.491083 | 2.2:+54666775 | MS.gene070233:CDS |
| TTGTCTTCTTGTTGGATGGA+AGG | 0.499303 | 2.2:+54667496 | MS.gene070233:CDS |
| AAGCGCTGGATTTAGATCCT+TGG | 0.500832 | 2.2:-54666652 | None:intergenic |
| CCCTATAGTAATGGTTGTCA+CGG | 0.506352 | 2.2:+54667130 | MS.gene070233:CDS |
| GTCATTGTCTTCTTGTTGGA+TGG | 0.509549 | 2.2:+54667492 | MS.gene070233:CDS |
| ATAATTGTATCGAATACAAA+AGG | 0.522577 | 2.2:-54666960 | None:intergenic |
| CCTTGAGCTTCTAAAGATAA+CGG | 0.523094 | 2.2:+54666848 | MS.gene070233:CDS |
| CTACCAAACTTCTTTAGCAC+CGG | 0.524208 | 2.2:+54666128 | MS.gene070233:CDS |
| TGACACTGGTAAAAGATTGA+AGG | 0.529885 | 2.2:+54666914 | MS.gene070233:CDS |
| AAAATCATTAACTGGATGAA+GGG | 0.532257 | 2.2:-54666211 | None:intergenic |
| ATTGATCTCGAAATCCGTAA+AGG | 0.532305 | 2.2:+54666774 | MS.gene070233:CDS |
| CCGTTATCTTTAGAAGCTCA+AGG | 0.533344 | 2.2:-54666848 | None:intergenic |
| AAGATAACGGCTATTGTGAC+CGG | 0.536013 | 2.2:+54666861 | MS.gene070233:CDS |
| CGTTATCTTTAGAAGCTCAA+GGG | 0.536414 | 2.2:-54666847 | None:intergenic |
| AACCATAAACCCTATAGTAA+TGG | 0.546098 | 2.2:+54667121 | MS.gene070233:CDS |
| ACAAACAATATGCAAAAGAT+GGG | 0.551770 | 2.2:+54666603 | MS.gene070233:CDS |
| AAGAGGTTACTACCTGATGA+AGG | 0.555954 | 2.2:+54666183 | MS.gene070233:CDS |
| GACATGAATCTTCTTAGCAT+CGG | 0.571430 | 2.2:-54666751 | None:intergenic |
| ACCTTTATTTGATCCTCAAG+AGG | 0.572203 | 2.2:+54666626 | MS.gene070233:CDS |
| TCATGGTATTAGGAATATTG+TGG | 0.583709 | 2.2:+54667298 | MS.gene070233:CDS |
| AATGAACCATGTCAAAGTGT+AGG | 0.587676 | 2.2:-54666041 | None:intergenic |
| AAGTATCATCACCAAGAACA+AGG | 0.600969 | 2.2:+54665988 | MS.gene070233:CDS |
| GTTGCTAAAAGATTTCCTTG+TGG | 0.611038 | 2.2:+54667443 | MS.gene070233:CDS |
| TTAGCTTGTGCTGAGAAAGT+CGG | 0.613798 | 2.2:+54666429 | MS.gene070233:intron |
| TGATAACCTACACTTTGACA+TGG | 0.617264 | 2.2:+54666035 | MS.gene070233:CDS |
| AGACTCTGAGGAAACTGTTG+TGG | 0.618556 | 2.2:+54667025 | MS.gene070233:CDS |
| AGGTAACCCCGTTAAGCGCG+TGG | 0.626614 | 2.2:+54666515 | MS.gene070233:CDS |
| AATGAACCACGCGCTTAACG+GGG | 0.629117 | 2.2:-54666521 | None:intergenic |
| AAATCCGTAAAGGGTTACAA+TGG | 0.629230 | 2.2:+54666784 | MS.gene070233:CDS |
| AAGCATATAGTTGATGACAC+TGG | 0.630401 | 2.2:+54666900 | MS.gene070233:CDS |
| GTTATCTTTAGAAGCTCAAG+GGG | 0.631960 | 2.2:-54666846 | None:intergenic |
| TCATGAAGATAGCTGGAACA+AGG | 0.635820 | 2.2:+54666283 | MS.gene070233:CDS |
| ACTATGGCAAAGGCTTCAAG+AGG | 0.640667 | 2.2:+54666166 | MS.gene070233:CDS |
| ATATTGAAGAACTATGGCAA+AGG | 0.655251 | 2.2:+54666156 | MS.gene070233:CDS |
| GAAATGTGAAGATTGATGTG+TGG | 0.658264 | 2.2:+54667348 | MS.gene070233:CDS |
| TGATCCTCAAGAGGTAACCA+AGG | 0.673485 | 2.2:+54666635 | MS.gene070233:CDS |
| AATGTGCAAGAATTTCCACA+AGG | 0.746520 | 2.2:-54667458 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AACATTGAAATTTTACAAAA+TGG | - | chr2.2:54666699-54666718 | None:intergenic | 15.0% |
| !! | ATAATTGTATCGAATACAAA+AGG | - | chr2.2:54666963-54666982 | None:intergenic | 20.0% |
| !! | ATTCGATACAATTATTGTAT+CGG | + | chr2.2:54666968-54666987 | MS.gene070233:CDS | 20.0% |
| ! | AAAATCATTAACTGGATGAA+GGG | - | chr2.2:54666214-54666233 | None:intergenic | 25.0% |
| ! | ACAAACAATATGCAAAAGAT+GGG | + | chr2.2:54666603-54666622 | MS.gene070233:CDS | 25.0% |
| ! | ATCAAACCAAAATCATTAAC+TGG | - | chr2.2:54666222-54666241 | None:intergenic | 25.0% |
| ! | GTTGATATATTGAAGAACTA+TGG | + | chr2.2:54666150-54666169 | MS.gene070233:CDS | 25.0% |
| ! | TAGTTCTTCAATATATCAAC+CGG | - | chr2.2:54666150-54666169 | None:intergenic | 25.0% |
| !! | ATTTTTCACAAGATTTGGAA+TGG | + | chr2.2:54667376-54667395 | MS.gene070233:CDS | 25.0% |
| !!! | TGTATTTTAGTCATGGTATT+AGG | + | chr2.2:54667288-54667307 | MS.gene070233:CDS | 25.0% |
| AACCATAAACCCTATAGTAA+TGG | + | chr2.2:54667121-54667140 | MS.gene070233:CDS | 30.0% | |
| AACCATTACTATAGGGTTTA+TGG | - | chr2.2:54667126-54667145 | None:intergenic | 30.0% | |
| AAGAAGTTTGGTAGAATTGT+TGG | - | chr2.2:54666122-54666141 | None:intergenic | 30.0% | |
| ATATTGAAGAACTATGGCAA+AGG | + | chr2.2:54666156-54666175 | MS.gene070233:CDS | 30.0% | |
| CAAAATCATTAACTGGATGA+AGG | - | chr2.2:54666215-54666234 | None:intergenic | 30.0% | |
| CAAACAGAAACAGAGTTAAT+TGG | - | chr2.2:54667527-54667546 | None:intergenic | 30.0% | |
| CAGAGAAACAAAAACCAAAA+GGG | - | chr2.2:54666362-54666381 | None:intergenic | 30.0% | |
| GACAAACAATATGCAAAAGA+TGG | + | chr2.2:54666602-54666621 | MS.gene070233:CDS | 30.0% | |
| GAGTCTTTATCTTCAAAGAA+AGG | + | chr2.2:54666495-54666514 | MS.gene070233:CDS | 30.0% | |
| TCATGGTATTAGGAATATTG+TGG | + | chr2.2:54667298-54667317 | MS.gene070233:CDS | 30.0% | |
| TCTTGCACATTTGATATGAA+TGG | + | chr2.2:54667470-54667489 | MS.gene070233:CDS | 30.0% | |
| ! | CTTCATCCAGTTAATGATTT+TGG | + | chr2.2:54666213-54666232 | MS.gene070233:CDS | 30.0% |
| ! | TTGATTCTTAATCACCCTTT+TGG | + | chr2.2:54666345-54666364 | MS.gene070233:intron | 30.0% |
| !! | AAAAAAGTGCTTCGATGAAA+CGG | - | chr2.2:54667193-54667212 | None:intergenic | 30.0% |
| !! | AGAGCATTTTTCACAAGATT+TGG | + | chr2.2:54667371-54667390 | MS.gene070233:CDS | 30.0% |
| !! | CAATTAACTCTGTTTCTGTT+TGG | + | chr2.2:54667525-54667544 | MS.gene070233:CDS | 30.0% |
| !! | TGCATTTTTCGATAGTTTTG+AGG | + | chr2.2:54667220-54667239 | MS.gene070233:CDS | 30.0% |
| !!! | AGTTTTGAGGATTGTATGAA+AGG | + | chr2.2:54667233-54667252 | MS.gene070233:CDS | 30.0% |
| !!! | GAGTCAATGTATTTTAGTCA+TGG | + | chr2.2:54667281-54667300 | MS.gene070233:CDS | 30.0% |
| AAATCCGTAAAGGGTTACAA+TGG | + | chr2.2:54666784-54666803 | MS.gene070233:CDS | 35.0% | |
| AAGTATCATCACCAAGAACA+AGG | + | chr2.2:54665988-54666007 | MS.gene070233:CDS | 35.0% | |
| AATGAACCATGTCAAAGTGT+AGG | - | chr2.2:54666044-54666063 | None:intergenic | 35.0% | |
| AATGGTCATTGTCTTCTTGT+TGG | + | chr2.2:54667488-54667507 | MS.gene070233:CDS | 35.0% | |
| AATGTGCAAGAATTTCCACA+AGG | - | chr2.2:54667461-54667480 | None:intergenic | 35.0% | |
| ACCTCTTGAGGATCAAATAA+AGG | - | chr2.2:54666630-54666649 | None:intergenic | 35.0% | |
| AGGAAATCATCTTCTTGTGA+TGG | - | chr2.2:54665967-54665986 | None:intergenic | 35.0% | |
| ATTGATCTCGAAATCCGTAA+AGG | + | chr2.2:54666774-54666793 | MS.gene070233:CDS | 35.0% | |
| CAAAGAATCGACAAAGAAAC+AGG | + | chr2.2:54666564-54666583 | MS.gene070233:CDS | 35.0% | |
| CCAGAGAAACAAAAACCAAA+AGG | - | chr2.2:54666363-54666382 | None:intergenic | 35.0% | |
| CTTGATATGATCCTTGTTCT+TGG | - | chr2.2:54666002-54666021 | None:intergenic | 35.0% | |
| GAAATGTGAAGATTGATGTG+TGG | + | chr2.2:54667348-54667367 | MS.gene070233:CDS | 35.0% | |
| GAAGATATCATGAAGATAGC+TGG | + | chr2.2:54666276-54666295 | MS.gene070233:CDS | 35.0% | |
| GAAGATCTAGGAGACTATAA+TGG | + | chr2.2:54665898-54665917 | MS.gene070233:CDS | 35.0% | |
| GACATGAATCTTCTTAGCAT+CGG | - | chr2.2:54666754-54666773 | None:intergenic | 35.0% | |
| GATTCTTTGTTGAAGAGCTT+CGG | - | chr2.2:54666553-54666572 | None:intergenic | 35.0% | |
| GTCTTTGTATCAAGCTGAAT+TGG | + | chr2.2:54667421-54667440 | MS.gene070233:CDS | 35.0% | |
| GTTGCTAAAAGATTTCCTTG+TGG | + | chr2.2:54667443-54667462 | MS.gene070233:CDS | 35.0% | |
| TCCACTTTGTGACACAAAAA+AGG | + | chr2.2:54666095-54666114 | MS.gene070233:CDS | 35.0% | |
| TGACACTGGTAAAAGATTGA+AGG | + | chr2.2:54666914-54666933 | MS.gene070233:CDS | 35.0% | |
| TGATAACCTACACTTTGACA+TGG | + | chr2.2:54666035-54666054 | MS.gene070233:CDS | 35.0% | |
| TTGATCTCGAAATCCGTAAA+GGG | + | chr2.2:54666775-54666794 | MS.gene070233:CDS | 35.0% | |
| TTGTCCATTGTAACCCTTTA+CGG | - | chr2.2:54666791-54666810 | None:intergenic | 35.0% | |
| ! | ACCTTTATTTGATCCTCAAG+AGG | + | chr2.2:54666626-54666645 | MS.gene070233:CDS | 35.0% |
| ! | CCTTGAGCTTCTAAAGATAA+CGG | + | chr2.2:54666848-54666867 | MS.gene070233:CDS | 35.0% |
| ! | CGTTATCTTTAGAAGCTCAA+GGG | - | chr2.2:54666850-54666869 | None:intergenic | 35.0% |
| ! | CTCTCATGATTGTTTCAAGT+TGG | - | chr2.2:54667094-54667113 | None:intergenic | 35.0% |
| ! | CTTCAAAGTGTCTATGTTTC+CGG | - | chr2.2:54666883-54666902 | None:intergenic | 35.0% |
| ! | GAGTCTCTTTGCTCTAATTT+TGG | + | chr2.2:54665925-54665944 | MS.gene070233:CDS | 35.0% |
| ! | GTTATCTTTAGAAGCTCAAG+GGG | - | chr2.2:54666849-54666868 | None:intergenic | 35.0% |
| ! | TCTTTTCATGATAGACTCTG+AGG | + | chr2.2:54667013-54667032 | MS.gene070233:CDS | 35.0% |
| ! | TTTTTGTGTCACAAAGTGGA+GGG | - | chr2.2:54666095-54666114 | None:intergenic | 35.0% |
| !! | AAGCATATAGTTGATGACAC+TGG | + | chr2.2:54666900-54666919 | MS.gene070233:CDS | 35.0% |
| !! | GTTCTTGGTGATGATACTTT+AGG | - | chr2.2:54665987-54666006 | None:intergenic | 35.0% |
| !!! | CCTTTTGGTTTTTGTTTCTC+TGG | + | chr2.2:54666360-54666379 | MS.gene070233:intron | 35.0% |
| !!! | TCCTTTTTTGTGTCACAAAG+TGG | - | chr2.2:54666099-54666118 | None:intergenic | 35.0% |
| !!! | TTTTTTGTGTCACAAAGTGG+AGG | - | chr2.2:54666096-54666115 | None:intergenic | 35.0% |
| AAGAGGTTACTACCTGATGA+AGG | + | chr2.2:54666183-54666202 | MS.gene070233:CDS | 40.0% | |
| AGGAATATTGTGGCTGAAGA+AGG | + | chr2.2:54667308-54667327 | MS.gene070233:CDS | 40.0% | |
| ATAATGAACCACGCGCTTAA+CGG | - | chr2.2:54666526-54666545 | None:intergenic | 40.0% | |
| CCCTATAGTAATGGTTGTCA+CGG | + | chr2.2:54667130-54667149 | MS.gene070233:CDS | 40.0% | |
| CCGTGACAACCATTACTATA+GGG | - | chr2.2:54667133-54667152 | None:intergenic | 40.0% | |
| CTACCAAACTTCTTTAGCAC+CGG | + | chr2.2:54666128-54666147 | MS.gene070233:CDS | 40.0% | |
| GTCATTGTCTTCTTGTTGGA+TGG | + | chr2.2:54667492-54667511 | MS.gene070233:CDS | 40.0% | |
| TCATGAAGATAGCTGGAACA+AGG | + | chr2.2:54666283-54666302 | MS.gene070233:CDS | 40.0% | |
| TCCGTGACAACCATTACTAT+AGG | - | chr2.2:54667134-54667153 | None:intergenic | 40.0% | |
| TGTCTTCTTGTTGGATGGAA+GGG | + | chr2.2:54667497-54667516 | MS.gene070233:CDS | 40.0% | |
| TTGTCTTCTTGTTGGATGGA+AGG | + | chr2.2:54667496-54667515 | MS.gene070233:CDS | 40.0% | |
| ! | AAGATAACGGCTATTGTGAC+CGG | + | chr2.2:54666861-54666880 | MS.gene070233:CDS | 40.0% |
| ! | CCGTTATCTTTAGAAGCTCA+AGG | - | chr2.2:54666851-54666870 | None:intergenic | 40.0% |
| ! | TCGATTGAAGTGCTTGCATT+AGG | - | chr2.2:54666815-54666834 | None:intergenic | 40.0% |
| ! | TGAAGGGTTTTTCCTTCATC+AGG | - | chr2.2:54666198-54666217 | None:intergenic | 40.0% |
| !! | TTAGCTTGTGCTGAGAAAGT+CGG | + | chr2.2:54666429-54666448 | MS.gene070233:intron | 40.0% |
| ACTATGGCAAAGGCTTCAAG+AGG | + | chr2.2:54666166-54666185 | MS.gene070233:CDS | 45.0% | |
| AGATCCTTGGTTACCTCTTG+AGG | - | chr2.2:54666642-54666661 | None:intergenic | 45.0% | |
| TAATGAACCACGCGCTTAAC+GGG | - | chr2.2:54666525-54666544 | None:intergenic | 45.0% | |
| TGATCCTCAAGAGGTAACCA+AGG | + | chr2.2:54666635-54666654 | MS.gene070233:CDS | 45.0% | |
| ! | AGACTCTGAGGAAACTGTTG+TGG | + | chr2.2:54667025-54667044 | MS.gene070233:CDS | 45.0% |
| ! | CAACCGGTGCTAAAGAAGTT+TGG | - | chr2.2:54666134-54666153 | None:intergenic | 45.0% |
| !! | AAGCGCTGGATTTAGATCCT+TGG | - | chr2.2:54666655-54666674 | None:intergenic | 45.0% |
| AATGAACCACGCGCTTAACG+GGG | - | chr2.2:54666524-54666543 | None:intergenic | 50.0% | |
| TCAAAAAACGCGACAAGCGC+TGG | - | chr2.2:54666669-54666688 | None:intergenic | 50.0% | |
| TCTTCGTCGCAATCTGCATC+AGG | + | chr2.2:54666321-54666340 | MS.gene070233:CDS | 50.0% | |
| ! | CAAAGTGGAGGGTCTTTTGC+TGG | - | chr2.2:54666084-54666103 | None:intergenic | 50.0% |
| AGGTAACCCCGTTAAGCGCG+TGG | + | chr2.2:54666515-54666534 | MS.gene070233:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.2 | gene | 54665896 | 54667559 | 54665896 | ID=MS.gene070233 |
| chr2.2 | mRNA | 54665896 | 54667559 | 54665896 | ID=MS.gene070233.t1;Parent=MS.gene070233 |
| chr2.2 | exon | 54665896 | 54666342 | 54665896 | ID=MS.gene070233.t1.exon1;Parent=MS.gene070233.t1 |
| chr2.2 | CDS | 54665896 | 54666342 | 54665896 | ID=cds.MS.gene070233.t1;Parent=MS.gene070233.t1 |
| chr2.2 | exon | 54666433 | 54667559 | 54666433 | ID=MS.gene070233.t1.exon2;Parent=MS.gene070233.t1 |
| chr2.2 | CDS | 54666433 | 54667559 | 54666433 | ID=cds.MS.gene070233.t1;Parent=MS.gene070233.t1 |
| Gene Sequence |
| Protein sequence |