Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070292.t1 | KEH34100.1 | 89.5 | 810 | 40 | 1 | 1 | 765 | 1 | 810 | 0.00E+00 | 1419.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070292.t1 | P31542 | 52.0 | 821 | 282 | 7 | 1 | 713 | 91 | 907 | 7.0e-224 | 778.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070292.t1 | A0A072V7F1 | 89.5 | 810 | 40 | 1 | 1 | 765 | 1 | 810 | 0.0e+00 | 1419.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene054124 | MS.gene070292 | 0.802707 | 4.94E-49 | -1.69E-46 |
| MS.gene060553 | MS.gene070292 | 0.812437 | 4.24E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070292.t1 | MTR_3g461000 | 89.506 | 810 | 40 | 1 | 1 | 765 | 1 | 810 | 0.0 | 1469 |
| MS.gene070292.t1 | MTR_8g100040 | 51.766 | 821 | 284 | 8 | 1 | 713 | 95 | 911 | 0.0 | 786 |
| MS.gene070292.t1 | MTR_3g102830 | 51.401 | 821 | 287 | 8 | 1 | 713 | 96 | 912 | 0.0 | 778 |
| MS.gene070292.t1 | MTR_3g498725 | 49.518 | 830 | 307 | 10 | 1 | 722 | 91 | 916 | 0.0 | 749 |
| MS.gene070292.t1 | MTR_7g012820 | 48.000 | 325 | 166 | 1 | 383 | 704 | 546 | 870 | 4.18e-102 | 335 |
| MS.gene070292.t1 | MTR_7g012820 | 36.409 | 401 | 218 | 5 | 3 | 367 | 15 | 414 | 5.01e-70 | 247 |
| MS.gene070292.t1 | MTR_6g013660 | 48.598 | 321 | 162 | 1 | 387 | 704 | 617 | 937 | 7.77e-102 | 336 |
| MS.gene070292.t1 | MTR_6g013660 | 36.409 | 401 | 218 | 5 | 3 | 367 | 82 | 481 | 3.21e-68 | 243 |
| MS.gene070292.t1 | MTR_7g012820 | 48.328 | 329 | 159 | 3 | 383 | 704 | 617 | 941 | 2.24e-101 | 335 |
| MS.gene070292.t1 | MTR_7g012820 | 36.409 | 401 | 218 | 5 | 3 | 367 | 86 | 485 | 1.73e-69 | 247 |
| MS.gene070292.t1 | MTR_3g098310 | 46.765 | 340 | 170 | 4 | 383 | 713 | 616 | 953 | 7.45e-101 | 333 |
| MS.gene070292.t1 | MTR_3g098310 | 46.774 | 248 | 126 | 2 | 141 | 382 | 312 | 559 | 8.06e-58 | 213 |
| MS.gene070292.t1 | MTR_4g109450 | 46.894 | 322 | 166 | 3 | 382 | 701 | 534 | 852 | 2.14e-99 | 328 |
| MS.gene070292.t1 | MTR_4g109450 | 37.047 | 359 | 179 | 5 | 11 | 367 | 91 | 404 | 2.83e-62 | 225 |
| MS.gene070292.t1 | MTR_3g106160 | 46.462 | 325 | 170 | 1 | 383 | 703 | 625 | 949 | 5.47e-98 | 325 |
| MS.gene070292.t1 | MTR_3g106160 | 36.591 | 399 | 216 | 5 | 5 | 367 | 96 | 493 | 5.39e-71 | 251 |
| MS.gene070292.t1 | MTR_7g028970 | 39.474 | 456 | 255 | 8 | 265 | 716 | 428 | 866 | 2.83e-93 | 311 |
| MS.gene070292.t1 | MTR_7g028970 | 32.918 | 401 | 229 | 5 | 5 | 367 | 6 | 404 | 8.03e-59 | 215 |
| MS.gene070292.t1 | MTR_4g109450 | 48.070 | 285 | 143 | 3 | 382 | 664 | 534 | 815 | 2.50e-89 | 299 |
| MS.gene070292.t1 | MTR_4g109450 | 37.047 | 359 | 179 | 5 | 11 | 367 | 91 | 404 | 1.74e-62 | 225 |
| MS.gene070292.t1 | MTR_2g099075 | 40.187 | 321 | 184 | 3 | 391 | 710 | 143 | 456 | 8.13e-76 | 253 |
| MS.gene070292.t1 | MTR_2g006950 | 41.034 | 290 | 160 | 4 | 391 | 677 | 72 | 353 | 5.97e-68 | 235 |
| MS.gene070292.t1 | MTR_2g006950 | 34.010 | 197 | 105 | 6 | 510 | 701 | 370 | 546 | 4.17e-27 | 117 |
| MS.gene070292.t1 | MTR_3g098310 | 46.774 | 248 | 126 | 2 | 141 | 382 | 312 | 559 | 2.66e-58 | 213 |
| MS.gene070292.t1 | MTR_3g098310 | 55.491 | 173 | 77 | 0 | 383 | 555 | 616 | 788 | 7.07e-58 | 211 |
| MS.gene070292.t1 | MTR_6g048860 | 46.259 | 147 | 79 | 0 | 118 | 264 | 127 | 273 | 2.78e-33 | 132 |
| MS.gene070292.t1 | MTR_1g076440 | 65.882 | 85 | 29 | 0 | 480 | 564 | 159 | 243 | 1.58e-29 | 120 |
| MS.gene070292.t1 | MTR_1g076440 | 35.398 | 113 | 70 | 1 | 28 | 140 | 1 | 110 | 5.57e-14 | 73.9 |
| MS.gene070292.t1 | MTR_1614s0010 | 34.031 | 191 | 118 | 3 | 486 | 675 | 1 | 184 | 8.88e-23 | 97.1 |
| MS.gene070292.t1 | MTR_5g098360 | 46.809 | 94 | 49 | 1 | 407 | 500 | 75 | 167 | 7.67e-19 | 85.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070292.t1 | AT5G50920 | 51.463 | 820 | 287 | 8 | 1 | 713 | 94 | 909 | 0.0 | 788 |
| MS.gene070292.t1 | AT3G48870 | 50.670 | 821 | 293 | 8 | 1 | 713 | 83 | 899 | 0.0 | 781 |
| MS.gene070292.t1 | AT3G48870 | 50.670 | 821 | 293 | 8 | 1 | 713 | 114 | 930 | 0.0 | 780 |
| MS.gene070292.t1 | AT3G48870 | 50.670 | 821 | 293 | 8 | 1 | 713 | 114 | 930 | 0.0 | 780 |
| MS.gene070292.t1 | AT3G48870 | 50.670 | 821 | 293 | 8 | 1 | 713 | 114 | 930 | 0.0 | 780 |
| MS.gene070292.t1 | AT5G51070 | 37.778 | 855 | 382 | 14 | 1 | 711 | 79 | 927 | 0.0 | 553 |
| MS.gene070292.t1 | AT5G15450 | 48.287 | 321 | 164 | 1 | 386 | 704 | 614 | 934 | 2.80e-102 | 337 |
| MS.gene070292.t1 | AT5G15450 | 35.661 | 401 | 221 | 5 | 3 | 367 | 80 | 479 | 2.83e-67 | 240 |
| MS.gene070292.t1 | AT2G25140 | 48.308 | 325 | 164 | 2 | 383 | 703 | 616 | 940 | 1.28e-100 | 332 |
| MS.gene070292.t1 | AT2G25140 | 36.090 | 399 | 217 | 5 | 5 | 367 | 88 | 484 | 1.00e-67 | 241 |
| MS.gene070292.t1 | AT1G74310 | 48.101 | 316 | 159 | 3 | 388 | 701 | 537 | 849 | 2.49e-99 | 328 |
| MS.gene070292.t1 | AT1G74310 | 34.663 | 401 | 226 | 6 | 3 | 367 | 4 | 404 | 4.32e-62 | 225 |
| MS.gene070292.t1 | AT1G74310 | 49.462 | 279 | 136 | 3 | 388 | 664 | 537 | 812 | 8.58e-90 | 300 |
| MS.gene070292.t1 | AT1G74310 | 34.663 | 401 | 226 | 6 | 3 | 367 | 4 | 404 | 2.14e-62 | 224 |
| MS.gene070292.t1 | AT4G14670 | 44.130 | 247 | 134 | 3 | 122 | 366 | 124 | 368 | 2.08e-59 | 213 |
| MS.gene070292.t1 | AT4G14670 | 50.000 | 122 | 61 | 0 | 387 | 508 | 501 | 622 | 2.75e-33 | 136 |
| MS.gene070292.t1 | AT3G45450 | 38.438 | 333 | 161 | 9 | 1 | 313 | 1 | 309 | 4.69e-54 | 190 |
Find 115 sgRNAs with CRISPR-Local
Find 378 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCATTAGCTACAAACTATTT+TGG | 0.166362 | 3.3:+48788078 | MS.gene070292:CDS |
| TTTCATTGACATGTAGGTTT+AGG | 0.198579 | 3.3:+48788613 | MS.gene070292:CDS |
| TTCAACATGTTATTTCTTCT+TGG | 0.203026 | 3.3:+48787836 | MS.gene070292:CDS |
| CACAGTGCAGCTAGATTAAT+TGG | 0.252437 | 3.3:+48788150 | MS.gene070292:CDS |
| GGACACAATGCACCTACTTT+TGG | 0.267605 | 3.3:+48783907 | MS.gene070292:CDS |
| CATATACTACTTGGGATTCT+TGG | 0.268673 | 3.3:+48783246 | MS.gene070292:CDS |
| CTTGCAATAGTCCTTCTTAA+TGG | 0.273975 | 3.3:-48788681 | None:intergenic |
| TTCATTGACATGTAGGTTTA+GGG | 0.278123 | 3.3:+48788614 | MS.gene070292:CDS |
| GATGGTTCAACCACTTTAAC+TGG | 0.293201 | 3.3:-48787376 | None:intergenic |
| GGGTTGCTTCAAGGGTCTAA+TGG | 0.296255 | 3.3:+48783929 | MS.gene070292:CDS |
| GTTTGTCTTGTAAAGATATA+AGG | 0.297746 | 3.3:+48783376 | MS.gene070292:CDS |
| AGGGATTATGTGATTCAAAA+TGG | 0.298678 | 3.3:+48788633 | MS.gene070292:CDS |
| GAAACCATAGAAATTCTTAA+AGG | 0.304814 | 3.3:+48787406 | MS.gene070292:CDS |
| ATCAAATCAATTGCCTTATC+AGG | 0.314089 | 3.3:-48787631 | None:intergenic |
| CTACTCCAGGTTCTCCTATA+AGG | 0.314863 | 3.3:-48786329 | None:intergenic |
| AGCTAATGCATTGGCTAATT+CGG | 0.325948 | 3.3:-48788064 | None:intergenic |
| GAGGCCTTTAAGAATTTCTA+TGG | 0.327315 | 3.3:-48787410 | None:intergenic |
| CGATCGTTTCTTACCTGATA+AGG | 0.357419 | 3.3:+48787618 | MS.gene070292:CDS |
| ATGTGCAAAGAAAGTAATTA+TGG | 0.364066 | 3.3:+48783173 | MS.gene070292:CDS |
| TTCATGTTCACCGGTCCTTC+AGG | 0.371875 | 3.3:+48788030 | MS.gene070292:CDS |
| GGGATTCTTGGTGATTCAAA+TGG | 0.372242 | 3.3:+48783258 | MS.gene070292:CDS |
| CTTGAATTACACCTCTTTCA+AGG | 0.373725 | 3.3:-48787183 | None:intergenic |
| AGTAATTATGGCTGCACAAA+AGG | 0.386618 | 3.3:+48783185 | MS.gene070292:CDS |
| CATGTTATTTCTTCTTGGAT+TGG | 0.389250 | 3.3:+48787841 | MS.gene070292:CDS |
| ATGCTACAAATTCTTGATGA+TGG | 0.390372 | 3.3:+48788297 | MS.gene070292:CDS |
| ATTATAATGACTAGCAATCT+TGG | 0.395448 | 3.3:+48788369 | MS.gene070292:CDS |
| TTGACCGCCGTCACGGAAAC+CGG | 0.402934 | 3.3:-48788190 | None:intergenic |
| TGGAATTTCATGCAATTTGA+TGG | 0.409908 | 3.3:+48788908 | MS.gene070292:CDS |
| CGAATTTCTCTGAATAGCTT+CGG | 0.415428 | 3.3:-48788217 | None:intergenic |
| GATGTTAAGGAAAGAAATAA+AGG | 0.443438 | 3.3:+48788731 | MS.gene070292:CDS |
| TTGAAACATGCCCTTGAAAG+AGG | 0.447531 | 3.3:+48787172 | MS.gene070292:CDS |
| GGTAGAGGTGGTGGTTGTAG+TGG | 0.448297 | 3.3:+48783354 | MS.gene070292:CDS |
| AATATTTCAACCAGTTAAAG+TGG | 0.449508 | 3.3:+48787366 | MS.gene070292:CDS |
| TGATGGAGAGAGAAAAGATA+TGG | 0.451204 | 3.3:+48788884 | MS.gene070292:CDS |
| CCTTGCCTTATAGGAGAACC+TGG | 0.452712 | 3.3:+48786324 | MS.gene070292:CDS |
| ATTGATTTGATTGATGAAGC+TGG | 0.454157 | 3.3:+48787643 | MS.gene070292:CDS |
| CATTGGCTGAAAAGATGTTA+AGG | 0.458668 | 3.3:+48788718 | MS.gene070292:CDS |
| GTGAACATGAAACTTGCAAT+AGG | 0.461655 | 3.3:-48788018 | None:intergenic |
| TGCTCTTCCCTTCCCACAAA+AGG | 0.461700 | 3.3:-48786255 | None:intergenic |
| AGCACAGAACATATACTACT+TGG | 0.463548 | 3.3:+48783237 | MS.gene070292:CDS |
| TAGGGAGCAAGTGATGAAGT+TGG | 0.470468 | 3.3:+48783329 | MS.gene070292:CDS |
| CTTGGTAACAACATTATTGA+AGG | 0.473402 | 3.3:+48788387 | MS.gene070292:CDS |
| TCACGGAAACCGGCATAGCC+AGG | 0.477017 | 3.3:-48788180 | None:intergenic |
| AAGTTGGTTGGTAGAGGTGG+TGG | 0.480856 | 3.3:+48783345 | MS.gene070292:CDS |
| GGAATTTCATGCAATTTGAT+GGG | 0.482208 | 3.3:+48788909 | MS.gene070292:CDS |
| TCCTTTGGTACATCACTGAC+TGG | 0.488002 | 3.3:-48787868 | None:intergenic |
| GGCTATGCCGGTTTCCGTGA+CGG | 0.488783 | 3.3:+48788183 | MS.gene070292:CDS |
| TTGAATTACACCTCTTTCAA+GGG | 0.490421 | 3.3:-48787182 | None:intergenic |
| AGATTAATTGGAGCACCTCC+TGG | 0.491051 | 3.3:+48788162 | MS.gene070292:CDS |
| AATGAATTTACCTAGACTCT+TGG | 0.492507 | 3.3:-48783445 | None:intergenic |
| TACATCTTTCATTGACATGT+AGG | 0.492656 | 3.3:+48788607 | MS.gene070292:CDS |
| CAAAAGGAAGCAAGGTTTGT+GGG | 0.497205 | 3.3:+48783201 | MS.gene070292:CDS |
| GGATTCTTGGTGATTCAAAT+GGG | 0.503736 | 3.3:+48783259 | MS.gene070292:CDS |
| TCAGGTGGTTGCATTGGATG+TGG | 0.506347 | 3.3:+48786988 | MS.gene070292:intron |
| AAGAATCAAGTGTTTAATCA+AGG | 0.508788 | 3.3:+48787054 | MS.gene070292:CDS |
| ATAGTTTGTAGCTAATGCAT+TGG | 0.510870 | 3.3:-48788073 | None:intergenic |
| ATTAGATATGAGTGAGTACA+TGG | 0.518212 | 3.3:+48788122 | MS.gene070292:CDS |
| AGAACTAACAAAATTGGAAG+TGG | 0.523751 | 3.3:+48788527 | MS.gene070292:CDS |
| ATTTGTCTCAGCAATATGTA+AGG | 0.523988 | 3.3:+48787497 | MS.gene070292:CDS |
| AATGGATATAATCCTAGCTA+TGG | 0.526824 | 3.3:+48788651 | MS.gene070292:CDS |
| GGAGCACCTCCTGGCTATGC+CGG | 0.527334 | 3.3:+48788171 | MS.gene070292:CDS |
| CTTATAGGAGAACCTGGAGT+AGG | 0.527810 | 3.3:+48786330 | MS.gene070292:CDS |
| TCTATGGTTTCTTCAACAGA+TGG | 0.528707 | 3.3:-48787394 | None:intergenic |
| GTTGGTGATTATTTAGCTGA+TGG | 0.528783 | 3.3:+48788867 | MS.gene070292:CDS |
| ATTGCAAGTTTCATGTTCAC+CGG | 0.535119 | 3.3:+48788021 | MS.gene070292:CDS |
| GAAGCATGTCTTCTAAATTG+AGG | 0.535628 | 3.3:-48787906 | None:intergenic |
| GGTGATTCAAATGGGTTGAC+TGG | 0.536125 | 3.3:+48783267 | MS.gene070292:CDS |
| GGAAGACTCACAGATGGAAA+AGG | 0.536149 | 3.3:+48788318 | MS.gene070292:CDS |
| GGAGAGAGAAAAGATATGGT+TGG | 0.539804 | 3.3:+48788888 | MS.gene070292:CDS |
| TCTGTTGATCATTCAGATGT+TGG | 0.553274 | 3.3:+48788849 | MS.gene070292:CDS |
| ACTCAATTGATACAAAATCA+AGG | 0.556610 | 3.3:+48783959 | MS.gene070292:CDS |
| ACGAATCGCTCGGCAGATTG+TGG | 0.558075 | 3.3:-48787962 | None:intergenic |
| CTCAAACATGCCAAGAGTCT+AGG | 0.560172 | 3.3:+48783435 | MS.gene070292:CDS |
| CCAGGTTCTCCTATAAGGCA+AGG | 0.561002 | 3.3:-48786324 | None:intergenic |
| GAAGTTCATCACATATTCGA+TGG | 0.563873 | 3.3:+48787115 | MS.gene070292:CDS |
| TGTTCAACTTTGTCATGCAA+AGG | 0.564537 | 3.3:+48787672 | MS.gene070292:CDS |
| TGCCTTAGGTTATGATAATG+TGG | 0.566760 | 3.3:+48783886 | MS.gene070292:intron |
| TTATAGGAGAACCTGGAGTA+GGG | 0.567197 | 3.3:+48786331 | MS.gene070292:CDS |
| GTGATGAAGTTGGTTGGTAG+AGG | 0.569417 | 3.3:+48783339 | MS.gene070292:CDS |
| AATGGTCTAGCACCATAGCT+AGG | 0.571100 | 3.3:-48788663 | None:intergenic |
| CGGTTAATTGACCGCCGTCA+CGG | 0.572693 | 3.3:-48788197 | None:intergenic |
| GAGCAAGTGATGAAGTTGGT+TGG | 0.572864 | 3.3:+48783333 | MS.gene070292:CDS |
| ATGAAGTTGGTTGGTAGAGG+TGG | 0.573783 | 3.3:+48783342 | MS.gene070292:CDS |
| CTTGAAGCAACCCCAAAAGT+AGG | 0.575361 | 3.3:-48783919 | None:intergenic |
| GTTGATATCAATGTTGATGA+GGG | 0.577273 | 3.3:+48788771 | MS.gene070292:CDS |
| AGTGATGTACCAAAGGAAGA+AGG | 0.581553 | 3.3:+48787874 | MS.gene070292:CDS |
| TTGGTAACAACATTATTGAA+GGG | 0.582740 | 3.3:+48788388 | MS.gene070292:CDS |
| TTAAGGAAAGAAATAAAGGA+AGG | 0.583157 | 3.3:+48788735 | MS.gene070292:CDS |
| ACAAAAGGAAGCAAGGTTTG+TGG | 0.584334 | 3.3:+48783200 | MS.gene070292:CDS |
| GCACAGAACATATACTACTT+GGG | 0.584965 | 3.3:+48783238 | MS.gene070292:CDS |
| ACCAGTCAGTGATGTACCAA+AGG | 0.593951 | 3.3:+48787867 | MS.gene070292:CDS |
| TGGCTGCACAAAAGGAAGCA+AGG | 0.598708 | 3.3:+48783193 | MS.gene070292:CDS |
| CAGGTTCTCCTATAAGGCAA+GGG | 0.602718 | 3.3:-48786323 | None:intergenic |
| GATGATGGAAGACTCACAGA+TGG | 0.603024 | 3.3:+48788312 | MS.gene070292:CDS |
| GCATGTCTTCTAAATTGAGG+AGG | 0.605380 | 3.3:-48787903 | None:intergenic |
| ATGCTTCACAAACACGTCAT+CGG | 0.606617 | 3.3:+48787922 | MS.gene070292:CDS |
| TGTTGATATCAATGTTGATG+AGG | 0.608337 | 3.3:+48788770 | MS.gene070292:CDS |
| TGATTCAGATAATTTGTCGA+AGG | 0.612119 | 3.3:+48786289 | MS.gene070292:CDS |
| CTCTAGCACGACGAATCGCT+CGG | 0.613183 | 3.3:-48787972 | None:intergenic |
| TTCACCGGTCCTTCAGGCGT+AGG | 0.614407 | 3.3:+48788036 | MS.gene070292:CDS |
| ATGGTGCTAGACCATTAAGA+AGG | 0.621925 | 3.3:+48788670 | MS.gene070292:CDS |
| GGGAAAACATCAATCATACA+TGG | 0.622271 | 3.3:+48786351 | MS.gene070292:CDS |
| GCGATTCGTCGTGCTAGAGT+CGG | 0.623561 | 3.3:+48787976 | MS.gene070292:CDS |
| GAATGAGCACAGAATGCACA+TGG | 0.632257 | 3.3:+48787321 | MS.gene070292:CDS |
| ATCAAATCAAGAATCTTCTG+AGG | 0.633705 | 3.3:+48787030 | MS.gene070292:CDS |
| ATCAAGGAAATTGAACTAAG+CGG | 0.638205 | 3.3:+48787070 | MS.gene070292:CDS |
| GCTTCAAGGGTCTAATGGTG+TGG | 0.639351 | 3.3:+48783934 | MS.gene070292:CDS |
| TCGGTCTAAGAAACTGCAGA+AGG | 0.646351 | 3.3:+48787995 | MS.gene070292:CDS |
| CAAAATGTATGCGAAACTGT+CGG | 0.646661 | 3.3:-48787152 | None:intergenic |
| AATGCGACTCATATGTTCCG+CGG | 0.684640 | 3.3:-48787432 | None:intergenic |
| GAAATTCTTAAAGGCCTCCG+CGG | 0.691862 | 3.3:+48787415 | MS.gene070292:CDS |
| TATGCCGGTTTCCGTGACGG+CGG | 0.702517 | 3.3:+48788186 | MS.gene070292:CDS |
| CGGAAACCGGCATAGCCAGG+AGG | 0.705177 | 3.3:-48788177 | None:intergenic |
| GCGACTCATATGTTCCGCGG+AGG | 0.708714 | 3.3:-48787429 | None:intergenic |
| ATTCGATGGAGAAACATCAG+AGG | 0.710407 | 3.3:+48787129 | MS.gene070292:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATGTAAACAAAATAATTT+CGG | + | chr3.3:48785478-48785497 | MS.gene070292:intron | 10.0% |
| !! | TATAAAATCTATTTATTTGT+GGG | - | chr3.3:48786739-48786758 | None:intergenic | 10.0% |
| !! | TTTCAAATTAATATTTGATT+GGG | + | chr3.3:48783760-48783779 | MS.gene070292:intron | 10.0% |
| !!! | AAAAATGTTTATAGAAATTT+TGG | - | chr3.3:48786641-48786660 | None:intergenic | 10.0% |
| !!! | AAAATGTTTATAGAAATTTT+GGG | - | chr3.3:48786640-48786659 | None:intergenic | 10.0% |
| !!! | AAATAAATAGATTTTATAGT+GGG | + | chr3.3:48786741-48786760 | MS.gene070292:intron | 10.0% |
| !!! | ATATAACAATAAAATTGTTT+TGG | + | chr3.3:48784491-48784510 | MS.gene070292:intron | 10.0% |
| !!! | CTTTTAATTTTTTTATTTGT+GGG | - | chr3.3:48786609-48786628 | None:intergenic | 10.0% |
| !!! | TTTTCAAATTAATATTTGAT+TGG | + | chr3.3:48783759-48783778 | MS.gene070292:intron | 10.0% |
| !! | AAATTAAACCAAATTGATTA+GGG | + | chr3.3:48783783-48783802 | MS.gene070292:intron | 15.0% |
| !! | AATTTGTCCTTAAAATTATA+TGG | - | chr3.3:48783631-48783650 | None:intergenic | 15.0% |
| !! | ATTTATAATTCTCAAATGTT+TGG | + | chr3.3:48787723-48787742 | MS.gene070292:intron | 15.0% |
| !! | CCACAAATAAAAAAATTAAA+AGG | + | chr3.3:48786607-48786626 | MS.gene070292:intron | 15.0% |
| !! | CTATAAAATCTATTTATTTG+TGG | - | chr3.3:48786740-48786759 | None:intergenic | 15.0% |
| !! | TACTATATAAGACTAATTAT+TGG | - | chr3.3:48787256-48787275 | None:intergenic | 15.0% |
| !! | TATTGATCATAAAAAGAATT+TGG | + | chr3.3:48788434-48788453 | MS.gene070292:CDS | 15.0% |
| !! | TGTATTACATATATGAATTA+TGG | + | chr3.3:48786183-48786202 | MS.gene070292:intron | 15.0% |
| !! | TTTACTGAAAAAATTATAGT+GGG | + | chr3.3:48786684-48786703 | MS.gene070292:intron | 15.0% |
| !!! | AAATGTTTATAGAAATTTTG+GGG | - | chr3.3:48786639-48786658 | None:intergenic | 15.0% |
| !!! | AATAAATAGATTTTATAGTG+GGG | + | chr3.3:48786742-48786761 | MS.gene070292:intron | 15.0% |
| !!! | AATTGATTTTAATGTTAGTA+GGG | + | chr3.3:48783311-48783330 | MS.gene070292:CDS | 15.0% |
| !!! | CAAATAAATAGATTTTATAG+TGG | + | chr3.3:48786740-48786759 | MS.gene070292:intron | 15.0% |
| !!! | CCTTTTAATTTTTTTATTTG+TGG | - | chr3.3:48786610-48786629 | None:intergenic | 15.0% |
| !!! | TTTTAAAGAACTAACAAAAT+TGG | + | chr3.3:48788521-48788540 | MS.gene070292:CDS | 15.0% |
| !!! | TTTTACTGAAAAAATTATAG+TGG | + | chr3.3:48786683-48786702 | MS.gene070292:intron | 15.0% |
| !! | AAATGTTTGGATTAATCAAA+TGG | + | chr3.3:48787736-48787755 | MS.gene070292:intron | 20.0% |
| !! | AATGTTTGGATTAATCAAAT+GGG | + | chr3.3:48787737-48787756 | MS.gene070292:intron | 20.0% |
| !! | AGAAGATTCAAAGAATAAAA+TGG | + | chr3.3:48784147-48784166 | MS.gene070292:intron | 20.0% |
| !! | AGAATAATTCGATACATATA+GGG | + | chr3.3:48784314-48784333 | MS.gene070292:intron | 20.0% |
| !! | AGACTAATGTTTCAAATTTA+TGG | + | chr3.3:48783565-48783584 | MS.gene070292:intron | 20.0% |
| !! | ATAGCTTACTATATTTAGTA+AGG | - | chr3.3:48784382-48784401 | None:intergenic | 20.0% |
| !! | CAAATATACACTATATACAA+AGG | - | chr3.3:48787291-48787310 | None:intergenic | 20.0% |
| !! | GAAATTAAACCAAATTGATT+AGG | + | chr3.3:48783782-48783801 | MS.gene070292:intron | 20.0% |
| !! | GAAGATTCAAAGAATAAAAT+GGG | + | chr3.3:48784148-48784167 | MS.gene070292:intron | 20.0% |
| !! | GAATCCAAAAAATGTTAAAA+GGG | + | chr3.3:48788809-48788828 | MS.gene070292:CDS | 20.0% |
| !! | GACTAATGTTTCAAATTTAT+GGG | + | chr3.3:48783566-48783585 | MS.gene070292:intron | 20.0% |
| !! | TCATAAAAAGAATTTGGTTA+TGG | + | chr3.3:48788440-48788459 | MS.gene070292:CDS | 20.0% |
| !! | TGAAAATTCACAAGATTAAA+AGG | + | chr3.3:48786567-48786586 | MS.gene070292:intron | 20.0% |
| !! | TGAATCCAAAAAATGTTAAA+AGG | + | chr3.3:48788808-48788827 | MS.gene070292:CDS | 20.0% |
| !! | TTACTGAAAAAATTATAGTG+GGG | + | chr3.3:48786685-48786704 | MS.gene070292:intron | 20.0% |
| !! | TTTCTTTCAATATTCTCTTT+GGG | + | chr3.3:48785004-48785023 | MS.gene070292:intron | 20.0% |
| !!! | AAAAAGTGCTTTTTTTTGTA+GGG | + | chr3.3:48786222-48786241 | MS.gene070292:intron | 20.0% |
| !!! | GAATTGATTTTAATGTTAGT+AGG | + | chr3.3:48783310-48783329 | MS.gene070292:CDS | 20.0% |
| !!! | GTATATTTGACTTATACTTT+GGG | + | chr3.3:48785712-48785731 | MS.gene070292:intron | 20.0% |
| !!! | TAAAAAGTGCTTTTTTTTGT+AGG | + | chr3.3:48786221-48786240 | MS.gene070292:intron | 20.0% |
| !!! | TCATTCTAAAATTTTGTTCA+AGG | + | chr3.3:48783590-48783609 | MS.gene070292:intron | 20.0% |
| !!! | TGGTTGAAATATTCTTTTTA+AGG | - | chr3.3:48787359-48787378 | None:intergenic | 20.0% |
| !!! | TTAATTTGAAAAGCATTCAT+AGG | - | chr3.3:48783751-48783770 | None:intergenic | 20.0% |
| !!! | TTTTCTTTCAATATTCTCTT+TGG | + | chr3.3:48785003-48785022 | MS.gene070292:intron | 20.0% |
| ! | AAAAAGTAATCAATCTTCGT+TGG | - | chr3.3:48785242-48785261 | None:intergenic | 25.0% |
| ! | AAAAAGTGATCAAAATTCGT+CGG | + | chr3.3:48785029-48785048 | MS.gene070292:intron | 25.0% |
| ! | AAAAGTAATCAATCTTCGTT+GGG | - | chr3.3:48785241-48785260 | None:intergenic | 25.0% |
| ! | AAAGAAAGAAGAGAATTAGA+GGG | - | chr3.3:48784976-48784995 | None:intergenic | 25.0% |
| ! | AAGAATCAAGTGTTTAATCA+AGG | + | chr3.3:48787054-48787073 | MS.gene070292:CDS | 25.0% |
| ! | AATATTTCAACCAGTTAAAG+TGG | + | chr3.3:48787366-48787385 | MS.gene070292:CDS | 25.0% |
| ! | ACTCAATTGATACAAAATCA+AGG | + | chr3.3:48783959-48783978 | MS.gene070292:CDS | 25.0% |
| ! | AGAAGTTTGTGAAAAAATGA+TGG | + | chr3.3:48788575-48788594 | MS.gene070292:CDS | 25.0% |
| ! | ATAGAGTGAAAGAAATGAAT+TGG | - | chr3.3:48783843-48783862 | None:intergenic | 25.0% |
| ! | ATGTGCAAAGAAAGTAATTA+TGG | + | chr3.3:48783173-48783192 | MS.gene070292:CDS | 25.0% |
| ! | ATTATAATGACTAGCAATCT+TGG | + | chr3.3:48788369-48788388 | MS.gene070292:CDS | 25.0% |
| ! | ATTTATGTTAGATACAACCT+AGG | + | chr3.3:48784881-48784900 | MS.gene070292:intron | 25.0% |
| ! | CAGAATTCTTGAAATAAAAC+TGG | + | chr3.3:48785761-48785780 | MS.gene070292:intron | 25.0% |
| ! | CCTAATTCCCAAAATTATTT+GGG | - | chr3.3:48786774-48786793 | None:intergenic | 25.0% |
| ! | CTAATTCCCAAAATTATTTG+GGG | - | chr3.3:48786773-48786792 | None:intergenic | 25.0% |
| ! | GAAACCATAGAAATTCTTAA+AGG | + | chr3.3:48787406-48787425 | MS.gene070292:CDS | 25.0% |
| ! | GAATAATTCGATACATATAG+GGG | + | chr3.3:48784315-48784334 | MS.gene070292:intron | 25.0% |
| ! | GAGAATAATTCGATACATAT+AGG | + | chr3.3:48784313-48784332 | MS.gene070292:intron | 25.0% |
| ! | GATGTTAAGGAAAGAAATAA+AGG | + | chr3.3:48788731-48788750 | MS.gene070292:CDS | 25.0% |
| ! | GTCCTTAAAATTATATGGTA+CGG | - | chr3.3:48783626-48783645 | None:intergenic | 25.0% |
| ! | GTTTGTCTTGTAAAGATATA+AGG | + | chr3.3:48783376-48783395 | MS.gene070292:CDS | 25.0% |
| ! | TAAAAAGAATTTGGTTATGG+AGG | + | chr3.3:48788443-48788462 | MS.gene070292:CDS | 25.0% |
| ! | TATAATACATGTTGCAGAAT+TGG | - | chr3.3:48787554-48787573 | None:intergenic | 25.0% |
| ! | TTAAGGAAAGAAATAAAGGA+AGG | + | chr3.3:48788735-48788754 | MS.gene070292:CDS | 25.0% |
| ! | TTCTTTCAATATTCTCTTTG+GGG | + | chr3.3:48785005-48785024 | MS.gene070292:intron | 25.0% |
| ! | TTGAAGAAAATGTTCACTAA+AGG | + | chr3.3:48784112-48784131 | MS.gene070292:intron | 25.0% |
| ! | TTTACTTTCCCTAATCAATT+TGG | - | chr3.3:48783794-48783813 | None:intergenic | 25.0% |
| ! | TTTCTAGATTCTCTTTACAT+TGG | - | chr3.3:48784054-48784073 | None:intergenic | 25.0% |
| !! | AACAATAACCTAGAGATTTT+TGG | + | chr3.3:48786071-48786090 | MS.gene070292:intron | 25.0% |
| !! | AAGAATTTTCTCTTGAAACT+TGG | + | chr3.3:48787207-48787226 | MS.gene070292:intron | 25.0% |
| !! | CAGATTTAAAATTATCCCAA+GGG | - | chr3.3:48785093-48785112 | None:intergenic | 25.0% |
| !! | GATATCGTGATTTAAGTTAA+AGG | - | chr3.3:48786911-48786930 | None:intergenic | 25.0% |
| !! | GGTATATTTGACTTATACTT+TGG | + | chr3.3:48785711-48785730 | MS.gene070292:intron | 25.0% |
| !! | TCTTCCCTTTTAACATTTTT+TGG | - | chr3.3:48788816-48788835 | None:intergenic | 25.0% |
| !! | TCTTTTTGTTCTGTTTCAAA+AGG | - | chr3.3:48787777-48787796 | None:intergenic | 25.0% |
| !! | TTGGTAACAACATTATTGAA+GGG | + | chr3.3:48788388-48788407 | MS.gene070292:CDS | 25.0% |
| !! | TTTGAAACAGAACAAAAAGA+GGG | + | chr3.3:48787777-48787796 | MS.gene070292:intron | 25.0% |
| !!! | AAATAATTTTGGGAATTAGG+GGG | + | chr3.3:48786774-48786793 | MS.gene070292:intron | 25.0% |
| !!! | AATTATAGTGGGGTTTTTTT+AGG | + | chr3.3:48786695-48786714 | MS.gene070292:intron | 25.0% |
| !!! | CAAATAATTTTGGGAATTAG+GGG | + | chr3.3:48786773-48786792 | MS.gene070292:intron | 25.0% |
| !!! | CCAAATAATTTTGGGAATTA+GGG | + | chr3.3:48786772-48786791 | MS.gene070292:intron | 25.0% |
| !!! | CTACTTATTTTCTCCTTTTT+GGG | - | chr3.3:48785267-48785286 | None:intergenic | 25.0% |
| !!! | TACTTATTTTCTCCTTTTTG+GGG | - | chr3.3:48785266-48785285 | None:intergenic | 25.0% |
| !!! | TCTACTTATTTTCTCCTTTT+TGG | - | chr3.3:48785268-48785287 | None:intergenic | 25.0% |
| !!! | TGTTTTGGAAGTATAAGTTT+TGG | + | chr3.3:48784542-48784561 | MS.gene070292:intron | 25.0% |
| !!! | TTCAACATGTTATTTCTTCT+TGG | + | chr3.3:48787836-48787855 | MS.gene070292:CDS | 25.0% |
| !!! | TTTATAGAAATTTTGGGGTT+GGG | - | chr3.3:48786634-48786653 | None:intergenic | 25.0% |
| !!! | TTTTGAAACAGAACAAAAAG+AGG | + | chr3.3:48787776-48787795 | MS.gene070292:intron | 25.0% |
| AAAAGTGATCAAAATTCGTC+GGG | + | chr3.3:48785030-48785049 | MS.gene070292:intron | 30.0% | |
| AAAATACATCATCAACCCTT+GGG | - | chr3.3:48785192-48785211 | None:intergenic | 30.0% | |
| AAACTAGGGTTAAGAGAAAT+TGG | - | chr3.3:48785804-48785823 | None:intergenic | 30.0% | |
| AAATTCGTGGAAAGAATCTA+CGG | + | chr3.3:48786480-48786499 | MS.gene070292:intron | 30.0% | |
| AATGAATTTACCTAGACTCT+TGG | - | chr3.3:48783448-48783467 | None:intergenic | 30.0% | |
| AATGGATATAATCCTAGCTA+TGG | + | chr3.3:48788651-48788670 | MS.gene070292:CDS | 30.0% | |
| AATTGCGAATTATGTGACTA+TGG | - | chr3.3:48784249-48784268 | None:intergenic | 30.0% | |
| ACGAATTTCTTCACGAATTT+GGG | + | chr3.3:48785968-48785987 | MS.gene070292:intron | 30.0% | |
| AGAACTAACAAAATTGGAAG+TGG | + | chr3.3:48788527-48788546 | MS.gene070292:CDS | 30.0% | |
| AGGGATTATGTGATTCAAAA+TGG | + | chr3.3:48788633-48788652 | MS.gene070292:CDS | 30.0% | |
| ATCAAATCAAGAATCTTCTG+AGG | + | chr3.3:48787030-48787049 | MS.gene070292:CDS | 30.0% | |
| ATCAAATCAATTGCCTTATC+AGG | - | chr3.3:48787634-48787653 | None:intergenic | 30.0% | |
| ATCAAGGAAATTGAACTAAG+CGG | + | chr3.3:48787070-48787089 | MS.gene070292:CDS | 30.0% | |
| ATGCTACAAATTCTTGATGA+TGG | + | chr3.3:48788297-48788316 | MS.gene070292:CDS | 30.0% | |
| ATTAGATATGAGTGAGTACA+TGG | + | chr3.3:48788122-48788141 | MS.gene070292:CDS | 30.0% | |
| ATTTGTCTCAGCAATATGTA+AGG | + | chr3.3:48787497-48787516 | MS.gene070292:CDS | 30.0% | |
| CAAAGAAAGAAGAGAATTAG+AGG | - | chr3.3:48784977-48784996 | None:intergenic | 30.0% | |
| CAATTTGATGGGAAAAATGT+TGG | + | chr3.3:48788920-48788939 | MS.gene070292:CDS | 30.0% | |
| CACAGCAAATTGTAACTAAA+AGG | - | chr3.3:48786866-48786885 | None:intergenic | 30.0% | |
| CAGATTTAAATTTAGCCCAA+GGG | + | chr3.3:48785174-48785193 | MS.gene070292:intron | 30.0% | |
| CCCTAATTCCCAAAATTATT+TGG | - | chr3.3:48786775-48786794 | None:intergenic | 30.0% | |
| CTCTTTACATTGGAAAACAA+TGG | - | chr3.3:48784044-48784063 | None:intergenic | 30.0% | |
| GACTAATGTGTGAAATGTAA+AGG | - | chr3.3:48787234-48787253 | None:intergenic | 30.0% | |
| GATTCAAAGAATAAAATGGG+AGG | + | chr3.3:48784151-48784170 | MS.gene070292:intron | 30.0% | |
| GGAAAAATTCGTAAGTCTTA+TGG | + | chr3.3:48783288-48783307 | MS.gene070292:CDS | 30.0% | |
| GGAATTTCATGCAATTTGAT+GGG | + | chr3.3:48788909-48788928 | MS.gene070292:CDS | 30.0% | |
| GGGTATTTATAGGTAGAAAT+AGG | - | chr3.3:48784909-48784928 | None:intergenic | 30.0% | |
| GGTTGTATCTAACATAAATG+TGG | - | chr3.3:48784880-48784899 | None:intergenic | 30.0% | |
| GTAAAAAAAACGTGTGAAAG+TGG | - | chr3.3:48784858-48784877 | None:intergenic | 30.0% | |
| GTGGGAATCTATTTATTTGT+GGG | - | chr3.3:48786721-48786740 | None:intergenic | 30.0% | |
| TACATCTTTCATTGACATGT+AGG | + | chr3.3:48788607-48788626 | MS.gene070292:CDS | 30.0% | |
| TATGTTCCTGAAAAACTCAA+GGG | + | chr3.3:48786399-48786418 | MS.gene070292:CDS | 30.0% | |
| TGAAGAAGATGATGAAACTA+GGG | - | chr3.3:48785818-48785837 | None:intergenic | 30.0% | |
| TGGAATTTCATGCAATTTGA+TGG | + | chr3.3:48788908-48788927 | MS.gene070292:CDS | 30.0% | |
| TGTCATGCAAAGGTAAAAAA+TGG | + | chr3.3:48787682-48787701 | MS.gene070292:intron | 30.0% | |
| TGTGGGAATCTATTTATTTG+TGG | - | chr3.3:48786722-48786741 | None:intergenic | 30.0% | |
| TGTTGATATCAATGTTGATG+AGG | + | chr3.3:48788770-48788789 | MS.gene070292:CDS | 30.0% | |
| TTATGTTCCTGAAAAACTCA+AGG | + | chr3.3:48786398-48786417 | MS.gene070292:CDS | 30.0% | |
| TTATTCTTTGAATCTTCTGC+AGG | - | chr3.3:48784145-48784164 | None:intergenic | 30.0% | |
| TTCATTGACATGTAGGTTTA+GGG | + | chr3.3:48788614-48788633 | MS.gene070292:CDS | 30.0% | |
| TTGAAACAGAACAAAAAGAG+GGG | + | chr3.3:48787778-48787797 | MS.gene070292:intron | 30.0% | |
| TTGAATTACACCTCTTTCAA+GGG | - | chr3.3:48787185-48787204 | None:intergenic | 30.0% | |
| TTTCATTGACATGTAGGTTT+AGG | + | chr3.3:48788613-48788632 | MS.gene070292:CDS | 30.0% | |
| ! | AAGGACTATTGCAAGATTTT+TGG | + | chr3.3:48788689-48788708 | MS.gene070292:CDS | 30.0% |
| ! | ATAGTTTGTAGCTAATGCAT+TGG | - | chr3.3:48788076-48788095 | None:intergenic | 30.0% |
| ! | ATTTGACTTATACTTTGGGA+GGG | + | chr3.3:48785716-48785735 | MS.gene070292:intron | 30.0% |
| ! | CTTGGTAACAACATTATTGA+AGG | + | chr3.3:48788387-48788406 | MS.gene070292:CDS | 30.0% |
| ! | GACCGTACCATATAATTTTA+AGG | + | chr3.3:48783621-48783640 | MS.gene070292:intron | 30.0% |
| ! | GCAGATTTAAAATTATCCCA+AGG | - | chr3.3:48785094-48785113 | None:intergenic | 30.0% |
| ! | GCATTAGCTACAAACTATTT+TGG | + | chr3.3:48788078-48788097 | MS.gene070292:CDS | 30.0% |
| ! | GTTGATATCAATGTTGATGA+GGG | + | chr3.3:48788771-48788790 | MS.gene070292:CDS | 30.0% |
| ! | TATTTGACTTATACTTTGGG+AGG | + | chr3.3:48785715-48785734 | MS.gene070292:intron | 30.0% |
| ! | TGATTCAGATAATTTGTCGA+AGG | + | chr3.3:48786289-48786308 | MS.gene070292:CDS | 30.0% |
| !! | AAGATTTTTGGAAGACACAT+TGG | + | chr3.3:48788701-48788720 | MS.gene070292:CDS | 30.0% |
| !! | AAGTATGTGAGGGTATTTAT+AGG | - | chr3.3:48784919-48784938 | None:intergenic | 30.0% |
| !! | AATTTCTTTGAAATGCGAAC+AGG | + | chr3.3:48784077-48784096 | MS.gene070292:intron | 30.0% |
| !! | ATAGATTTTATAGTGGGGTT+TGG | + | chr3.3:48786747-48786766 | MS.gene070292:intron | 30.0% |
| !! | ATTGATTTGATTGATGAAGC+TGG | + | chr3.3:48787643-48787662 | MS.gene070292:CDS | 30.0% |
| !! | CATGTTATTTCTTCTTGGAT+TGG | + | chr3.3:48787841-48787860 | MS.gene070292:CDS | 30.0% |
| !! | CCCAAATAATTTTGGGAATT+AGG | + | chr3.3:48786771-48786790 | MS.gene070292:intron | 30.0% |
| !! | TGGACTTTTACTTTGGAAAT+GGG | - | chr3.3:48784719-48784738 | None:intergenic | 30.0% |
| !! | TTGAGTGAGCTTTGAAATTT+GGG | + | chr3.3:48786828-48786847 | MS.gene070292:intron | 30.0% |
| !! | TTGGACTTTTACTTTGGAAA+TGG | - | chr3.3:48784720-48784739 | None:intergenic | 30.0% |
| !! | TTTAATTTAGTGGGTTTGGT+GGG | + | chr3.3:48786798-48786817 | MS.gene070292:intron | 30.0% |
| !! | TTTGAGTGAGCTTTGAAATT+TGG | + | chr3.3:48786827-48786846 | MS.gene070292:intron | 30.0% |
| !!! | ATATCACACTTTTTCACACT+AGG | - | chr3.3:48787817-48787836 | None:intergenic | 30.0% |
| !!! | GATTACTTTTTACCCCAAAA+AGG | + | chr3.3:48785251-48785270 | MS.gene070292:intron | 30.0% |
| !!! | GTTTATAGAAATTTTGGGGT+TGG | - | chr3.3:48786635-48786654 | None:intergenic | 30.0% |
| !!! | TTATAGAAATTTTGGGGTTG+GGG | - | chr3.3:48786633-48786652 | None:intergenic | 30.0% |
| !!! | TTCCACTTACTTTGTTTTTC+AGG | + | chr3.3:48786970-48786989 | MS.gene070292:intron | 30.0% |
| AAAAACAACCCTTGCCTTAT+AGG | + | chr3.3:48786315-48786334 | MS.gene070292:CDS | 35.0% | |
| AAAGAATCTACGGTAGTTAG+AGG | + | chr3.3:48786490-48786509 | MS.gene070292:intron | 35.0% | |
| AAAGTGATCAAAATTCGTCG+GGG | + | chr3.3:48785031-48785050 | MS.gene070292:intron | 35.0% | |
| AAGGCATAACAAACTATGTG+AGG | - | chr3.3:48783872-48783891 | None:intergenic | 35.0% | |
| AGCACAGAACATATACTACT+TGG | + | chr3.3:48783237-48783256 | MS.gene070292:CDS | 35.0% | |
| AGTAATTATGGCTGCACAAA+AGG | + | chr3.3:48783185-48783204 | MS.gene070292:CDS | 35.0% | |
| ATAGGTAGAAATAGGAACCT+AGG | - | chr3.3:48784901-48784920 | None:intergenic | 35.0% | |
| ATGTTCCTGAAAAACTCAAG+GGG | + | chr3.3:48786400-48786419 | MS.gene070292:CDS | 35.0% | |
| ATTATATGGTACGGTCAACT+TGG | - | chr3.3:48783617-48783636 | None:intergenic | 35.0% | |
| ATTGCAAGTTTCATGTTCAC+CGG | + | chr3.3:48788021-48788040 | MS.gene070292:CDS | 35.0% | |
| CAAAATGTATGCGAAACTGT+CGG | - | chr3.3:48787155-48787174 | None:intergenic | 35.0% | |
| CAAATTCGTGAAGAAATTCG+TGG | - | chr3.3:48785969-48785988 | None:intergenic | 35.0% | |
| CACCTGAAAAACAAAGTAAG+TGG | - | chr3.3:48786975-48786994 | None:intergenic | 35.0% | |
| CACGAATTTCTTCACGAATT+TGG | + | chr3.3:48785967-48785986 | MS.gene070292:intron | 35.0% | |
| CATATACTACTTGGGATTCT+TGG | + | chr3.3:48783246-48783265 | MS.gene070292:CDS | 35.0% | |
| CCAGATTTAAATTTAGCCCA+AGG | + | chr3.3:48785173-48785192 | MS.gene070292:intron | 35.0% | |
| CCTTGGGCTAAATTTAAATC+TGG | - | chr3.3:48785176-48785195 | None:intergenic | 35.0% | |
| CGAATTTCTCTGAATAGCTT+CGG | - | chr3.3:48788220-48788239 | None:intergenic | 35.0% | |
| CTTGAATTACACCTCTTTCA+AGG | - | chr3.3:48787186-48787205 | None:intergenic | 35.0% | |
| CTTGCAATAGTCCTTCTTAA+TGG | - | chr3.3:48788684-48788703 | None:intergenic | 35.0% | |
| GAAAATACATCATCAACCCT+TGG | - | chr3.3:48785193-48785212 | None:intergenic | 35.0% | |
| GAAGCATGTCTTCTAAATTG+AGG | - | chr3.3:48787909-48787928 | None:intergenic | 35.0% | |
| GAAGTTCATCACATATTCGA+TGG | + | chr3.3:48787115-48787134 | MS.gene070292:CDS | 35.0% | |
| GCACAGAACATATACTACTT+GGG | + | chr3.3:48783238-48783257 | MS.gene070292:CDS | 35.0% | |
| GGAAATGGGAAAAACTGTTT+GGG | - | chr3.3:48784705-48784724 | None:intergenic | 35.0% | |
| GGAGATAATGTGAGGAATAT+AGG | - | chr3.3:48784942-48784961 | None:intergenic | 35.0% | |
| GGGAAAACATCAATCATACA+TGG | + | chr3.3:48786351-48786370 | MS.gene070292:CDS | 35.0% | |
| GTCCACATTATCATAACCTA+AGG | - | chr3.3:48783891-48783910 | None:intergenic | 35.0% | |
| GTGAACATGAAACTTGCAAT+AGG | - | chr3.3:48788021-48788040 | None:intergenic | 35.0% | |
| GTGAAGAAGATGATGAAACT+AGG | - | chr3.3:48785819-48785838 | None:intergenic | 35.0% | |
| GTGTGCATAATGTCACATTA+TGG | - | chr3.3:48786938-48786957 | None:intergenic | 35.0% | |
| GTTCAATTATTGAGCAGCAA+CGG | + | chr3.3:48786885-48786904 | MS.gene070292:intron | 35.0% | |
| TACCAGCACAAGTAACAAAT+AGG | - | chr3.3:48786455-48786474 | None:intergenic | 35.0% | |
| TCTATGGTTTCTTCAACAGA+TGG | - | chr3.3:48787397-48787416 | None:intergenic | 35.0% | |
| TCTGTAGGCAATTCTTCATT+GGG | + | chr3.3:48784634-48784653 | MS.gene070292:intron | 35.0% | |
| TCTGTTGATCATTCAGATGT+TGG | + | chr3.3:48788849-48788868 | MS.gene070292:CDS | 35.0% | |
| TGAAAAACTCAAGGGGAAAA+AGG | + | chr3.3:48786407-48786426 | MS.gene070292:CDS | 35.0% | |
| TGATGGAGAGAGAAAAGATA+TGG | + | chr3.3:48788884-48788903 | MS.gene070292:CDS | 35.0% | |
| TGGAAATGGGAAAAACTGTT+TGG | - | chr3.3:48784706-48784725 | None:intergenic | 35.0% | |
| TGGAACCAATCTGACAAAAT+TGG | + | chr3.3:48786091-48786110 | MS.gene070292:intron | 35.0% | |
| TGGGTAAAAAGAACTTCTTG+TGG | + | chr3.3:48785141-48785160 | MS.gene070292:intron | 35.0% | |
| TGTTCAACTTTGTCATGCAA+AGG | + | chr3.3:48787672-48787691 | MS.gene070292:CDS | 35.0% | |
| TTCTGTAGGCAATTCTTCAT+TGG | + | chr3.3:48784633-48784652 | MS.gene070292:intron | 35.0% | |
| TTGTGGGTTTGCATAAATGT+TGG | - | chr3.3:48786593-48786612 | None:intergenic | 35.0% | |
| ! | AACCTATTTGTTACTTGTGC+TGG | + | chr3.3:48786450-48786469 | MS.gene070292:intron | 35.0% |
| ! | AGGAATATAGGAAGTATGTG+AGG | - | chr3.3:48784930-48784949 | None:intergenic | 35.0% |
| ! | ATCATGAGACCTTGAAGTTT+TGG | + | chr3.3:48786520-48786539 | MS.gene070292:intron | 35.0% |
| ! | ATGATGTATTTTCCCCAAGA+AGG | + | chr3.3:48785200-48785219 | MS.gene070292:intron | 35.0% |
| ! | ATTAGGGGGCTTTAATTTAG+TGG | + | chr3.3:48786788-48786807 | MS.gene070292:intron | 35.0% |
| ! | CAAGAAGTTCTTTTTACCCA+CGG | - | chr3.3:48785141-48785160 | None:intergenic | 35.0% |
| ! | CAGTAACATTTTCTTCAACC+TGG | - | chr3.3:48784177-48784196 | None:intergenic | 35.0% |
| ! | CATTGGCTGAAAAGATGTTA+AGG | + | chr3.3:48788718-48788737 | MS.gene070292:CDS | 35.0% |
| ! | CTATGTCATACGTTTTCTGT+AGG | + | chr3.3:48784619-48784638 | MS.gene070292:intron | 35.0% |
| ! | GAGGCCTTTAAGAATTTCTA+TGG | - | chr3.3:48787413-48787432 | None:intergenic | 35.0% |
| ! | GATTGGTTCCAAAAATCTCT+AGG | - | chr3.3:48786082-48786101 | None:intergenic | 35.0% |
| ! | GGAATATAGGAAGTATGTGA+GGG | - | chr3.3:48784929-48784948 | None:intergenic | 35.0% |
| ! | GGATTCTTGGTGATTCAAAT+GGG | + | chr3.3:48783259-48783278 | MS.gene070292:CDS | 35.0% |
| ! | GGCATTTTGGACTTTTACTT+TGG | - | chr3.3:48784726-48784745 | None:intergenic | 35.0% |
| ! | GGTAAACTTCATCCTTTTGT+GGG | + | chr3.3:48786243-48786262 | MS.gene070292:CDS | 35.0% |
| ! | GTTTGGCCCCAAATAATTTT+GGG | + | chr3.3:48786764-48786783 | MS.gene070292:intron | 35.0% |
| ! | TCAAGTCGATTCAAAAACTC+TGG | - | chr3.3:48788489-48788508 | None:intergenic | 35.0% |
| ! | TGCCTTAGGTTATGATAATG+TGG | + | chr3.3:48783886-48783905 | MS.gene070292:intron | 35.0% |
| ! | TTAGGGGGCTTTAATTTAGT+GGG | + | chr3.3:48786789-48786808 | MS.gene070292:intron | 35.0% |
| ! | TTGTGCCAATTTTGTCAGAT+TGG | - | chr3.3:48786099-48786118 | None:intergenic | 35.0% |
| ! | TTTTTCCCCTTGAGTTTTTC+AGG | - | chr3.3:48786408-48786427 | None:intergenic | 35.0% |
| !! | AGCTAATGCATTGGCTAATT+CGG | - | chr3.3:48788067-48788086 | None:intergenic | 35.0% |
| !! | CACATAGTTTGTTATGCCTT+AGG | + | chr3.3:48783872-48783891 | MS.gene070292:intron | 35.0% |
| !! | CTTTAATTTAGTGGGTTTGG+TGG | + | chr3.3:48786797-48786816 | MS.gene070292:intron | 35.0% |
| !! | GTTGGTGATTATTTAGCTGA+TGG | + | chr3.3:48788867-48788886 | MS.gene070292:CDS | 35.0% |
| !! | TGAGTGAGCTTTGAAATTTG+GGG | + | chr3.3:48786829-48786848 | MS.gene070292:intron | 35.0% |
| !! | TTAATTTAGTGGGTTTGGTG+GGG | + | chr3.3:48786799-48786818 | MS.gene070292:intron | 35.0% |
| !!! | CACTTACTTTGTTTTTCAGG+TGG | + | chr3.3:48786973-48786992 | MS.gene070292:intron | 35.0% |
| AAAATAGTGAGCAGCCTTCT+TGG | - | chr3.3:48785217-48785236 | None:intergenic | 40.0% | |
| AAAATAGTGAGTAGCCGACT+TGG | + | chr3.3:48785055-48785074 | MS.gene070292:intron | 40.0% | |
| AAAGAATAAAATGGGAGGCC+AGG | + | chr3.3:48784156-48784175 | MS.gene070292:intron | 40.0% | |
| AAATAGTGAGCAGCCTTCTT+GGG | - | chr3.3:48785216-48785235 | None:intergenic | 40.0% | |
| AACGTGAGTTAACATGCGTA+AGG | + | chr3.3:48785689-48785708 | MS.gene070292:intron | 40.0% | |
| AAGTCACGCTCTTAATACAC+TGG | - | chr3.3:48784820-48784839 | None:intergenic | 40.0% | |
| ACAAAAGGAAGCAAGGTTTG+TGG | + | chr3.3:48783200-48783219 | MS.gene070292:CDS | 40.0% | |
| ACCCGCATAAATTCGTAAGT+GGG | - | chr3.3:48785937-48785956 | None:intergenic | 40.0% | |
| ACGTGAGTTAACATGCGTAA+GGG | + | chr3.3:48785690-48785709 | MS.gene070292:intron | 40.0% | |
| AGCATAGTTACAGAATTCGC+TGG | - | chr3.3:48786048-48786067 | None:intergenic | 40.0% | |
| AGTGATGTACCAAAGGAAGA+AGG | + | chr3.3:48787874-48787893 | MS.gene070292:CDS | 40.0% | |
| ATGCTTCACAAACACGTCAT+CGG | + | chr3.3:48787922-48787941 | MS.gene070292:CDS | 40.0% | |
| ATTCGATGGAGAAACATCAG+AGG | + | chr3.3:48787129-48787148 | MS.gene070292:CDS | 40.0% | |
| CAAAAGGAAGCAAGGTTTGT+GGG | + | chr3.3:48783201-48783220 | MS.gene070292:CDS | 40.0% | |
| CAAAATTGGCACAAGAGGTA+TGG | + | chr3.3:48786105-48786124 | MS.gene070292:intron | 40.0% | |
| CAACTATGTTCCTCAACTCA+CGG | + | chr3.3:48785907-48785926 | MS.gene070292:intron | 40.0% | |
| CACAGTGCAGCTAGATTAAT+TGG | + | chr3.3:48788150-48788169 | MS.gene070292:CDS | 40.0% | |
| CCCACGGTAAAAAGTTTATG+CGG | - | chr3.3:48785125-48785144 | None:intergenic | 40.0% | |
| CGATCGTTTCTTACCTGATA+AGG | + | chr3.3:48787618-48787637 | MS.gene070292:CDS | 40.0% | |
| CTCCCACTTACGAATTTATG+CGG | + | chr3.3:48785932-48785951 | MS.gene070292:intron | 40.0% | |
| CTTCTTCACTAACGTGAAAG+CGG | + | chr3.3:48785830-48785849 | MS.gene070292:intron | 40.0% | |
| GAATTCTGCTCTTTACCAAC+TGG | - | chr3.3:48785749-48785768 | None:intergenic | 40.0% | |
| GATGGTTCAACCACTTTAAC+TGG | - | chr3.3:48787379-48787398 | None:intergenic | 40.0% | |
| GCATAGTTACAGAATTCGCT+GGG | - | chr3.3:48786047-48786066 | None:intergenic | 40.0% | |
| GCATGTCTTCTAAATTGAGG+AGG | - | chr3.3:48787906-48787925 | None:intergenic | 40.0% | |
| GGAAAAATGTTGGACATGCT+TGG | + | chr3.3:48788930-48788949 | MS.gene070292:CDS | 40.0% | |
| GGAGAGAGAAAAGATATGGT+TGG | + | chr3.3:48788888-48788907 | MS.gene070292:CDS | 40.0% | |
| GGGAGAATCAATATGCGAAT+CGG | + | chr3.3:48785988-48786007 | MS.gene070292:intron | 40.0% | |
| TACCCGCATAAATTCGTAAG+TGG | - | chr3.3:48785938-48785957 | None:intergenic | 40.0% | |
| TCCCACTTACGAATTTATGC+GGG | + | chr3.3:48785933-48785952 | MS.gene070292:intron | 40.0% | |
| TCTGACAAAATTGGCACAAG+AGG | + | chr3.3:48786100-48786119 | MS.gene070292:intron | 40.0% | |
| TGCTGGTATTGTGAAATTCG+TGG | + | chr3.3:48786467-48786486 | MS.gene070292:intron | 40.0% | |
| TTATAGGAGAACCTGGAGTA+GGG | + | chr3.3:48786331-48786350 | MS.gene070292:CDS | 40.0% | |
| TTGAAACATGCCCTTGAAAG+AGG | + | chr3.3:48787172-48787191 | MS.gene070292:CDS | 40.0% | |
| ! | AAATAGTGAGTAGCCGACTT+GGG | + | chr3.3:48785056-48785075 | MS.gene070292:intron | 40.0% |
| ! | AACTTCATCCTTTTGTGGGA+AGG | + | chr3.3:48786247-48786266 | MS.gene070292:CDS | 40.0% |
| ! | ACCGCATAAACTTTTTACCG+TGG | + | chr3.3:48785121-48785140 | MS.gene070292:intron | 40.0% |
| ! | ACTTCATCCTTTTGTGGGAA+GGG | + | chr3.3:48786248-48786267 | MS.gene070292:CDS | 40.0% |
| ! | AGCACATGTTAAGTTGCGTA+GGG | - | chr3.3:48784749-48784768 | None:intergenic | 40.0% |
| ! | ATGGTGCTAGACCATTAAGA+AGG | + | chr3.3:48788670-48788689 | MS.gene070292:CDS | 40.0% |
| ! | ATTGATGTTTTCCCTACTCC+AGG | - | chr3.3:48786345-48786364 | None:intergenic | 40.0% |
| ! | CATATAGGGGTATAGAGCTT+CGG | + | chr3.3:48784328-48784347 | MS.gene070292:intron | 40.0% |
| ! | CCGCATAAACTTTTTACCGT+GGG | + | chr3.3:48785122-48785141 | MS.gene070292:intron | 40.0% |
| ! | CTTGCTCAGAGAATTTTGAG+TGG | + | chr3.3:48786375-48786394 | MS.gene070292:CDS | 40.0% |
| ! | GGGATTCTTGGTGATTCAAA+TGG | + | chr3.3:48783258-48783277 | MS.gene070292:CDS | 40.0% |
| ! | GGGTAAACTTCATCCTTTTG+TGG | + | chr3.3:48786242-48786261 | MS.gene070292:intron | 40.0% |
| ! | GGTTTGGCCCCAAATAATTT+TGG | + | chr3.3:48786763-48786782 | MS.gene070292:intron | 40.0% |
| ! | TAGCACATGTTAAGTTGCGT+AGG | - | chr3.3:48784750-48784769 | None:intergenic | 40.0% |
| !! | ACACAATGCACCTACTTTTG+GGG | + | chr3.3:48783909-48783928 | MS.gene070292:CDS | 40.0% |
| !! | GACACAATGCACCTACTTTT+GGG | + | chr3.3:48783908-48783927 | MS.gene070292:CDS | 40.0% |
| !! | GGGCTTTAATTTAGTGGGTT+TGG | + | chr3.3:48786794-48786813 | MS.gene070292:intron | 40.0% |
| !! | TAATTTAGTGGGTTTGGTGG+GGG | + | chr3.3:48786800-48786819 | MS.gene070292:intron | 40.0% |
| !!! | TACTTTTGGGGTTGCTTCAA+GGG | + | chr3.3:48783921-48783940 | MS.gene070292:CDS | 40.0% |
| !!! | TGTTTTTCAGGTGGTTGCAT+TGG | + | chr3.3:48786982-48787001 | MS.gene070292:intron | 40.0% |
| AATAGTGAGCAGCCTTCTTG+GGG | - | chr3.3:48785215-48785234 | None:intergenic | 45.0% | |
| AATGGTCTAGCACCATAGCT+AGG | - | chr3.3:48788666-48788685 | None:intergenic | 45.0% | |
| ACCAGTCAGTGATGTACCAA+AGG | + | chr3.3:48787867-48787886 | MS.gene070292:CDS | 45.0% | |
| AGAGAATTAGAGGGAGAGAG+CGG | - | chr3.3:48784967-48784986 | None:intergenic | 45.0% | |
| CAGGTTCTCCTATAAGGCAA+GGG | - | chr3.3:48786326-48786345 | None:intergenic | 45.0% | |
| CTACTCCAGGTTCTCCTATA+AGG | - | chr3.3:48786332-48786351 | None:intergenic | 45.0% | |
| CTCAAACATGCCAAGAGTCT+AGG | + | chr3.3:48783435-48783454 | MS.gene070292:CDS | 45.0% | |
| CTTATAGGAGAACCTGGAGT+AGG | + | chr3.3:48786330-48786349 | MS.gene070292:CDS | 45.0% | |
| CTTGAAGCAACCCCAAAAGT+AGG | - | chr3.3:48783922-48783941 | None:intergenic | 45.0% | |
| GAAATTCTTAAAGGCCTCCG+CGG | + | chr3.3:48787415-48787434 | MS.gene070292:CDS | 45.0% | |
| GAATGAGCACAGAATGCACA+TGG | + | chr3.3:48787321-48787340 | MS.gene070292:CDS | 45.0% | |
| GGAAGACTCACAGATGGAAA+AGG | + | chr3.3:48788318-48788337 | MS.gene070292:CDS | 45.0% | |
| TAGGGAGCAAGTGATGAAGT+TGG | + | chr3.3:48783329-48783348 | MS.gene070292:CDS | 45.0% | |
| TCCTTTGGTACATCACTGAC+TGG | - | chr3.3:48787871-48787890 | None:intergenic | 45.0% | |
| TCGGTCTAAGAAACTGCAGA+AGG | + | chr3.3:48787995-48788014 | MS.gene070292:CDS | 45.0% | |
| ! | AATTGGCACAAGAGGTATGG+CGG | + | chr3.3:48786108-48786127 | MS.gene070292:intron | 45.0% |
| ! | AGATTAATTGGAGCACCTCC+TGG | + | chr3.3:48788162-48788181 | MS.gene070292:CDS | 45.0% |
| ! | AGGTTTTCGCCTTCTTCCTT+TGG | - | chr3.3:48787886-48787905 | None:intergenic | 45.0% |
| ! | CACATGTTAAGTTGCGTAGG+GGG | - | chr3.3:48784747-48784766 | None:intergenic | 45.0% |
| ! | GAGCAAGTGATGAAGTTGGT+TGG | + | chr3.3:48783333-48783352 | MS.gene070292:CDS | 45.0% |
| ! | GCACATGTTAAGTTGCGTAG+GGG | - | chr3.3:48784748-48784767 | None:intergenic | 45.0% |
| ! | GGACACAATGCACCTACTTT+TGG | + | chr3.3:48783907-48783926 | MS.gene070292:CDS | 45.0% |
| ! | TTTCAAGCCACTTGCTACGT+GGG | - | chr3.3:48786552-48786571 | None:intergenic | 45.0% |
| !! | AATAGTGAGTAGCCGACTTG+GGG | + | chr3.3:48785057-48785076 | MS.gene070292:intron | 45.0% |
| !! | ATGAAGTTGGTTGGTAGAGG+TGG | + | chr3.3:48783342-48783361 | MS.gene070292:CDS | 45.0% |
| !! | CTATGGTTCTGAGTCACAAC+AGG | - | chr3.3:48784232-48784251 | None:intergenic | 45.0% |
| !! | GATGATGGAAGACTCACAGA+TGG | + | chr3.3:48788312-48788331 | MS.gene070292:CDS | 45.0% |
| !! | GGTGATTCAAATGGGTTGAC+TGG | + | chr3.3:48783267-48783286 | MS.gene070292:CDS | 45.0% |
| !! | GTGATGAAGTTGGTTGGTAG+AGG | + | chr3.3:48783339-48783358 | MS.gene070292:CDS | 45.0% |
| !! | TTTTCAAGCCACTTGCTACG+TGG | - | chr3.3:48786553-48786572 | None:intergenic | 45.0% |
| !!! | CTACTTTTGGGGTTGCTTCA+AGG | + | chr3.3:48783920-48783939 | MS.gene070292:CDS | 45.0% |
| !!! | AATTTTTAAAAGAATATATA+TGG | + | chr3.3:48783674-48783693 | MS.gene070292:intron | 5.0% |
| !!! | TAAAAAAAAGTTTTTTTTTA+CGG | - | chr3.3:48786668-48786687 | None:intergenic | 5.0% |
| ATTCGCTCTGATACGCGGTA+CGG | + | chr3.3:48784266-48784285 | MS.gene070292:intron | 50.0% | |
| CCAGGTTCTCCTATAAGGCA+AGG | - | chr3.3:48786327-48786346 | None:intergenic | 50.0% | |
| CCTTGCCTTATAGGAGAACC+TGG | + | chr3.3:48786324-48786343 | MS.gene070292:CDS | 50.0% | |
| GAGAATTAGAGGGAGAGAGC+GGG | - | chr3.3:48784966-48784985 | None:intergenic | 50.0% | |
| GCTTCAAGGGTCTAATGGTG+TGG | + | chr3.3:48783934-48783953 | MS.gene070292:CDS | 50.0% | |
| GGGTTGCTTCAAGGGTCTAA+TGG | + | chr3.3:48783929-48783948 | MS.gene070292:CDS | 50.0% | |
| TCAGGTGGTTGCATTGGATG+TGG | + | chr3.3:48786988-48787007 | MS.gene070292:intron | 50.0% | |
| TCGCAATTCGCTCTGATACG+CGG | + | chr3.3:48784261-48784280 | MS.gene070292:intron | 50.0% | |
| TGCTCTTCCCTTCCCACAAA+AGG | - | chr3.3:48786258-48786277 | None:intergenic | 50.0% | |
| TGGCTGCACAAAAGGAAGCA+AGG | + | chr3.3:48783193-48783212 | MS.gene070292:CDS | 50.0% | |
| TTCATGTTCACCGGTCCTTC+AGG | + | chr3.3:48788030-48788049 | MS.gene070292:CDS | 50.0% | |
| ! | ACAGAATTCGCTGGGTTGAC+CGG | - | chr3.3:48786039-48786058 | None:intergenic | 50.0% |
| ! | CACAAGAGGTATGGCGGTAA+TGG | + | chr3.3:48786114-48786133 | MS.gene070292:intron | 50.0% |
| ! | GAGAAGAGTACGAGCAAGAG+TGG | - | chr3.3:48785875-48785894 | None:intergenic | 50.0% |
| ! | TCGGTTTTTCCTACGCCTGA+AGG | - | chr3.3:48788048-48788067 | None:intergenic | 50.0% |
| ! | TTTTCCTACGCCTGAAGGAC+CGG | - | chr3.3:48788043-48788062 | None:intergenic | 50.0% |
| ! | TTTTGTGGGAAGGGAAGAGC+AGG | + | chr3.3:48786257-48786276 | MS.gene070292:CDS | 50.0% |
| !! | AAGTTGGTTGGTAGAGGTGG+TGG | + | chr3.3:48783345-48783364 | MS.gene070292:CDS | 50.0% |
| !!! | AAGTTGCGTAGGGGGCATTT+TGG | - | chr3.3:48784739-48784758 | None:intergenic | 50.0% |
| AATTAGAGGGAGAGAGCGGG+AGG | - | chr3.3:48784963-48784982 | None:intergenic | 55.0% | |
| ACGAATCGCTCGGCAGATTG+TGG | - | chr3.3:48787965-48787984 | None:intergenic | 55.0% | |
| AGTGGGAGAACCGTGAGTTG+AGG | - | chr3.3:48785920-48785939 | None:intergenic | 55.0% | |
| CGAACCAATTCACGGTTCGC+CGG | + | chr3.3:48786017-48786036 | MS.gene070292:intron | 55.0% | |
| CGGTTAATTGACCGCCGTCA+CGG | - | chr3.3:48788200-48788219 | None:intergenic | 55.0% | |
| CTCTAGCACGACGAATCGCT+CGG | - | chr3.3:48787975-48787994 | None:intergenic | 55.0% | |
| GAGCGGGAGGAGATAATGTG+AGG | - | chr3.3:48784950-48784969 | None:intergenic | 55.0% | |
| GCGATTCGTCGTGCTAGAGT+CGG | + | chr3.3:48787976-48787995 | MS.gene070292:CDS | 55.0% | |
| GGTACGCGCGAACCAATTCA+CGG | + | chr3.3:48786009-48786028 | MS.gene070292:intron | 55.0% | |
| GGTCGATCACTTCCCCAAGT+CGG | - | chr3.3:48785072-48785091 | None:intergenic | 55.0% | |
| TCTGATACGCGGTACGGGTA+CGG | + | chr3.3:48784272-48784291 | MS.gene070292:intron | 55.0% | |
| TGGGAGGGAGCAAAACCAGT+TGG | + | chr3.3:48785731-48785750 | MS.gene070292:intron | 55.0% | |
| TGGGGAAGTGATCGACCCTT+GGG | + | chr3.3:48785075-48785094 | MS.gene070292:intron | 55.0% | |
| TTCGCTCTGATACGCGGTAC+GGG | + | chr3.3:48784267-48784286 | MS.gene070292:intron | 55.0% | |
| TTGACCGGCGAACCGTGAAT+TGG | - | chr3.3:48786024-48786043 | None:intergenic | 55.0% | |
| TTGGGGAAGTGATCGACCCT+TGG | + | chr3.3:48785074-48785093 | MS.gene070292:intron | 55.0% | |
| ! | CTTCGGTACGCTTCGATTCG+TGG | + | chr3.3:48784345-48784364 | MS.gene070292:intron | 55.0% |
| ! | GGTAGAGGTGGTGGTTGTAG+TGG | + | chr3.3:48783354-48783373 | MS.gene070292:CDS | 55.0% |
| CTGATACGCGGTACGGGTAC+GGG | + | chr3.3:48784273-48784292 | MS.gene070292:intron | 60.0% | |
| GCGACTCATATGTTCCGCGG+AGG | - | chr3.3:48787432-48787451 | None:intergenic | 60.0% | |
| GGGCTGGGGCCAAAACTTCA+AGG | - | chr3.3:48786532-48786551 | None:intergenic | 60.0% | |
| TCACGGAAACCGGCATAGCC+AGG | - | chr3.3:48788183-48788202 | None:intergenic | 60.0% | |
| TTCACCGGTCCTTCAGGCGT+AGG | + | chr3.3:48788036-48788055 | MS.gene070292:CDS | 60.0% | |
| TTGACCGCCGTCACGGAAAC+CGG | - | chr3.3:48788193-48788212 | None:intergenic | 60.0% | |
| ! | AAGCCACTTGCTACGTGGGC+TGG | - | chr3.3:48786548-48786567 | None:intergenic | 60.0% |
| ! | AGCCACTTGCTACGTGGGCT+GGG | - | chr3.3:48786547-48786566 | None:intergenic | 60.0% |
| !! | GGCTATGCCGGTTTCCGTGA+CGG | + | chr3.3:48788183-48788202 | MS.gene070292:CDS | 60.0% |
| !! | TATGCCGGTTTCCGTGACGG+CGG | + | chr3.3:48788186-48788205 | MS.gene070292:CDS | 60.0% |
| CGGAAACCGGCATAGCCAGG+AGG | - | chr3.3:48788180-48788199 | None:intergenic | 65.0% | |
| ! | GCCACTTGCTACGTGGGCTG+GGG | - | chr3.3:48786546-48786565 | None:intergenic | 65.0% |
| ! | GGAGCACCTCCTGGCTATGC+CGG | + | chr3.3:48788171-48788190 | MS.gene070292:CDS | 65.0% |
| GCCCCAGCCCACGTAGCAAG+TGG | + | chr3.3:48786542-48786561 | MS.gene070292:intron | 70.0% | |
| GCGGTACGGGTACGGGTTCG+TGG | + | chr3.3:48784280-48784299 | MS.gene070292:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 48783153 | 48788971 | 48783153 | ID=MS.gene070292 |
| chr3.3 | mRNA | 48783153 | 48788971 | 48783153 | ID=MS.gene070292.t1;Parent=MS.gene070292 |
| chr3.3 | exon | 48783153 | 48783456 | 48783153 | ID=MS.gene070292.t1.exon1;Parent=MS.gene070292.t1 |
| chr3.3 | CDS | 48783153 | 48783456 | 48783153 | ID=cds.MS.gene070292.t1;Parent=MS.gene070292.t1 |
| chr3.3 | exon | 48783894 | 48784009 | 48783894 | ID=MS.gene070292.t1.exon2;Parent=MS.gene070292.t1 |
| chr3.3 | CDS | 48783894 | 48784009 | 48783894 | ID=cds.MS.gene070292.t1;Parent=MS.gene070292.t1 |
| chr3.3 | exon | 48786243 | 48786428 | 48786243 | ID=MS.gene070292.t1.exon3;Parent=MS.gene070292.t1 |
| chr3.3 | CDS | 48786243 | 48786428 | 48786243 | ID=cds.MS.gene070292.t1;Parent=MS.gene070292.t1 |
| chr3.3 | exon | 48786992 | 48787204 | 48786992 | ID=MS.gene070292.t1.exon4;Parent=MS.gene070292.t1 |
| chr3.3 | CDS | 48786992 | 48787204 | 48786992 | ID=cds.MS.gene070292.t1;Parent=MS.gene070292.t1 |
| chr3.3 | exon | 48787301 | 48787518 | 48787301 | ID=MS.gene070292.t1.exon5;Parent=MS.gene070292.t1 |
| chr3.3 | CDS | 48787301 | 48787518 | 48787301 | ID=cds.MS.gene070292.t1;Parent=MS.gene070292.t1 |
| chr3.3 | exon | 48787618 | 48787693 | 48787618 | ID=MS.gene070292.t1.exon6;Parent=MS.gene070292.t1 |
| chr3.3 | CDS | 48787618 | 48787693 | 48787618 | ID=cds.MS.gene070292.t1;Parent=MS.gene070292.t1 |
| chr3.3 | exon | 48787787 | 48788971 | 48787787 | ID=MS.gene070292.t1.exon7;Parent=MS.gene070292.t1 |
| chr3.3 | CDS | 48787787 | 48788971 | 48787787 | ID=cds.MS.gene070292.t1;Parent=MS.gene070292.t1 |
| Gene Sequence |
| Protein sequence |
