Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060553.t1 | KEH32099.1 | 59.6 | 562 | 80 | 4 | 1 | 549 | 1 | 428 | 4.10E-76 | 295.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060553.t1 | Q9DED4 | 38.0 | 79 | 48 | 1 | 3 | 80 | 1 | 79 | 2.6e-10 | 68.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060553.t1 | A0A072UQJ0 | 59.6 | 562 | 80 | 4 | 1 | 549 | 1 | 428 | 2.9e-76 | 295.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049877 | MS.gene060553 | 0.835824 | 1.34E-56 | -1.69E-46 |
| MS.gene050355 | MS.gene060553 | 0.800798 | 1.22E-48 | -1.69E-46 |
| MS.gene050442 | MS.gene060553 | 0.804391 | 2.21E-49 | -1.69E-46 |
| MS.gene050820 | MS.gene060553 | 0.807583 | 4.71E-50 | -1.69E-46 |
| MS.gene052190 | MS.gene060553 | 0.833467 | 5.25E-56 | -1.69E-46 |
| MS.gene053966 | MS.gene060553 | 0.803136 | 4.03E-49 | -1.69E-46 |
| MS.gene054291 | MS.gene060553 | -0.833463 | 5.26E-56 | -1.69E-46 |
| MS.gene055358 | MS.gene060553 | 0.823933 | 1.06E-53 | -1.69E-46 |
| MS.gene055778 | MS.gene060553 | 0.81269 | 3.74E-51 | -1.69E-46 |
| MS.gene055818 | MS.gene060553 | 0.812292 | 4.56E-51 | -1.69E-46 |
| MS.gene056498 | MS.gene060553 | 0.811625 | 6.38E-51 | -1.69E-46 |
| MS.gene057026 | MS.gene060553 | 0.800581 | 1.35E-48 | -1.69E-46 |
| MS.gene057060 | MS.gene060553 | 0.816535 | 5.26E-52 | -1.69E-46 |
| MS.gene057314 | MS.gene060553 | 0.802085 | 6.63E-49 | -1.69E-46 |
| MS.gene058037 | MS.gene060553 | 0.805971 | 1.03E-49 | -1.69E-46 |
| MS.gene060553 | MS.gene060572 | 0.801696 | 7.97E-49 | -1.69E-46 |
| MS.gene060553 | MS.gene060781 | 0.803507 | 3.37E-49 | -1.69E-46 |
| MS.gene060553 | MS.gene060918 | 0.819782 | 9.70E-53 | -1.69E-46 |
| MS.gene060553 | MS.gene060919 | 0.838887 | 2.20E-57 | -1.69E-46 |
| MS.gene060553 | MS.gene061040 | -0.831091 | 2.03E-55 | -1.69E-46 |
| MS.gene060553 | MS.gene062672 | 0.808002 | 3.84E-50 | -1.69E-46 |
| MS.gene060553 | MS.gene06269 | 0.828702 | 7.76E-55 | -1.69E-46 |
| MS.gene060553 | MS.gene063069 | 0.811812 | 5.81E-51 | -1.69E-46 |
| MS.gene060553 | MS.gene066264 | 0.813788 | 2.14E-51 | -1.69E-46 |
| MS.gene060553 | MS.gene067208 | 0.804643 | 1.96E-49 | -1.69E-46 |
| MS.gene060553 | MS.gene067726 | 0.80715 | 5.82E-50 | -1.69E-46 |
| MS.gene060553 | MS.gene067932 | 0.805454 | 1.32E-49 | -1.69E-46 |
| MS.gene060553 | MS.gene068154 | 0.80118 | 1.02E-48 | -1.69E-46 |
| MS.gene060553 | MS.gene068304 | -0.80021 | 1.60E-48 | -1.69E-46 |
| MS.gene060553 | MS.gene068385 | 0.836809 | 7.53E-57 | -1.69E-46 |
| MS.gene060553 | MS.gene068456 | 0.820772 | 5.75E-53 | -1.69E-46 |
| MS.gene060553 | MS.gene068727 | 0.800403 | 1.47E-48 | -1.69E-46 |
| MS.gene060553 | MS.gene069956 | 0.81644 | 5.53E-52 | -1.69E-46 |
| MS.gene060553 | MS.gene070292 | 0.812437 | 4.24E-51 | -1.69E-46 |
| MS.gene060553 | MS.gene071059 | 0.802791 | 4.75E-49 | -1.69E-46 |
| MS.gene060553 | MS.gene071442 | 0.800201 | 1.61E-48 | -1.69E-46 |
| MS.gene060553 | MS.gene071444 | 0.802381 | 5.76E-49 | -1.69E-46 |
| MS.gene060553 | MS.gene071481 | 0.807785 | 4.27E-50 | -1.69E-46 |
| MS.gene060553 | MS.gene071529 | 0.805493 | 1.30E-49 | -1.69E-46 |
| MS.gene060553 | MS.gene072677 | 0.809402 | 1.93E-50 | -1.69E-46 |
| MS.gene060553 | MS.gene072942 | 0.800281 | 1.55E-48 | -1.69E-46 |
| MS.gene060553 | MS.gene073008 | 0.803387 | 3.57E-49 | -1.69E-46 |
| MS.gene060553 | MS.gene07344 | 0.806782 | 6.96E-50 | -1.69E-46 |
| MS.gene060553 | MS.gene08618 | 0.81561 | 8.47E-52 | -1.69E-46 |
| MS.gene060553 | MS.gene08854 | 0.800744 | 1.25E-48 | -1.69E-46 |
| MS.gene060553 | MS.gene22976 | 0.805821 | 1.11E-49 | -1.69E-46 |
| MS.gene060553 | MS.gene23218 | 0.800726 | 1.26E-48 | -1.69E-46 |
| MS.gene060553 | MS.gene23889 | 0.811428 | 7.04E-51 | -1.69E-46 |
| MS.gene060553 | MS.gene28514 | 0.806616 | 7.54E-50 | -1.69E-46 |
| MS.gene060553 | MS.gene29060 | 0.817174 | 3.78E-52 | -1.69E-46 |
| MS.gene060553 | MS.gene29086 | 0.806237 | 9.07E-50 | -1.69E-46 |
| MS.gene060553 | MS.gene31283 | 0.815291 | 9.97E-52 | -1.69E-46 |
| MS.gene060553 | MS.gene31365 | 0.805614 | 1.23E-49 | -1.69E-46 |
| MS.gene060553 | MS.gene31666 | 0.803411 | 3.53E-49 | -1.69E-46 |
| MS.gene060553 | MS.gene32231 | 0.810536 | 1.10E-50 | -1.69E-46 |
| MS.gene060553 | MS.gene32717 | 0.808535 | 2.95E-50 | -1.69E-46 |
| MS.gene060553 | MS.gene32899 | 0.80483 | 1.79E-49 | -1.69E-46 |
| MS.gene060553 | MS.gene33830 | 0.802133 | 6.48E-49 | -1.69E-46 |
| MS.gene060553 | MS.gene35408 | 0.809039 | 2.30E-50 | -1.69E-46 |
| MS.gene060553 | MS.gene35437 | -0.802552 | 5.31E-49 | -1.69E-46 |
| MS.gene060553 | MS.gene38876 | 0.808729 | 2.68E-50 | -1.69E-46 |
| MS.gene060553 | MS.gene38976 | 0.806552 | 7.78E-50 | -1.69E-46 |
| MS.gene060553 | MS.gene39069 | 0.816317 | 5.89E-52 | -1.69E-46 |
| MS.gene060553 | MS.gene42553 | 0.803481 | 3.41E-49 | -1.69E-46 |
| MS.gene060553 | MS.gene43459 | 0.805435 | 1.34E-49 | -1.69E-46 |
| MS.gene060553 | MS.gene43906 | 0.849062 | 4.11E-60 | -1.69E-46 |
| MS.gene060553 | MS.gene44986 | 0.812744 | 3.63E-51 | -1.69E-46 |
| MS.gene060553 | MS.gene47832 | 0.811919 | 5.50E-51 | -1.69E-46 |
| MS.gene060553 | MS.gene48704 | 0.812886 | 3.38E-51 | -1.69E-46 |
| MS.gene060553 | MS.gene50493 | 0.813374 | 2.64E-51 | -1.69E-46 |
| MS.gene060553 | MS.gene51549 | -0.804456 | 2.14E-49 | -1.69E-46 |
| MS.gene060553 | MS.gene52059 | 0.812729 | 3.66E-51 | -1.69E-46 |
| MS.gene060553 | MS.gene52525 | 0.807024 | 6.19E-50 | -1.69E-46 |
| MS.gene060553 | MS.gene53586 | 0.801513 | 8.69E-49 | -1.69E-46 |
| MS.gene060553 | MS.gene53771 | 0.803858 | 2.85E-49 | -1.69E-46 |
| MS.gene060553 | MS.gene54538 | 0.827963 | 1.17E-54 | -1.69E-46 |
| MS.gene060553 | MS.gene55200 | 0.876287 | 1.57E-68 | -1.69E-46 |
| MS.gene060553 | MS.gene57160 | -0.811858 | 5.67E-51 | -1.69E-46 |
| MS.gene060553 | MS.gene58686 | 0.855558 | 5.82E-62 | -1.69E-46 |
| MS.gene060553 | MS.gene61139 | 0.805619 | 1.22E-49 | -1.69E-46 |
| MS.gene060553 | MS.gene63008 | 0.810584 | 1.07E-50 | -1.69E-46 |
| MS.gene060553 | MS.gene63412 | 0.819175 | 1.33E-52 | -1.69E-46 |
| MS.gene060553 | MS.gene64249 | 0.819689 | 1.02E-52 | -1.69E-46 |
| MS.gene060553 | MS.gene64945 | 0.80155 | 8.54E-49 | -1.69E-46 |
| MS.gene060553 | MS.gene68333 | 0.815548 | 8.74E-52 | -1.69E-46 |
| MS.gene060553 | MS.gene68824 | 0.826537 | 2.57E-54 | -1.69E-46 |
| MS.gene060553 | MS.gene68826 | 0.847137 | 1.40E-59 | -1.69E-46 |
| MS.gene060553 | MS.gene71781 | 0.812542 | 4.02E-51 | -1.69E-46 |
| MS.gene060553 | MS.gene72268 | 0.812333 | 4.47E-51 | -1.69E-46 |
| MS.gene060553 | MS.gene72900 | -0.825886 | 3.67E-54 | -1.69E-46 |
| MS.gene060553 | MS.gene74257 | 0.802945 | 4.41E-49 | -1.69E-46 |
| MS.gene060553 | MS.gene74367 | 0.80404 | 2.61E-49 | -1.69E-46 |
| MS.gene060553 | MS.gene74370 | 0.847704 | 9.77E-60 | -1.69E-46 |
| MS.gene060553 | MS.gene74373 | 0.838751 | 2.39E-57 | -1.69E-46 |
| MS.gene060553 | MS.gene75963 | 0.802113 | 6.54E-49 | -1.69E-46 |
| MS.gene060553 | MS.gene77588 | 0.810584 | 1.07E-50 | -1.69E-46 |
| MS.gene060553 | MS.gene77781 | 0.812871 | 3.41E-51 | -1.69E-46 |
| MS.gene060553 | MS.gene77785 | 0.84828 | 6.78E-60 | -1.69E-46 |
| MS.gene060553 | MS.gene80355 | 0.801458 | 8.92E-49 | -1.69E-46 |
| MS.gene060553 | MS.gene83831 | 0.807473 | 4.97E-50 | -1.69E-46 |
| MS.gene060553 | MS.gene84865 | 0.801334 | 9.46E-49 | -1.69E-46 |
| MS.gene060553 | MS.gene85039 | 0.804196 | 2.43E-49 | -1.69E-46 |
| MS.gene060553 | MS.gene85562 | 0.810463 | 1.14E-50 | -1.69E-46 |
| MS.gene060553 | MS.gene87697 | 0.801334 | 9.46E-49 | -1.69E-46 |
| MS.gene060553 | MS.gene88091 | 0.821347 | 4.24E-53 | -1.69E-46 |
| MS.gene060553 | MS.gene88112 | 0.813725 | 2.21E-51 | -1.69E-46 |
| MS.gene060553 | MS.gene91676 | 0.807841 | 4.15E-50 | -1.69E-46 |
| MS.gene060553 | MS.gene91807 | 0.814197 | 1.74E-51 | -1.69E-46 |
| MS.gene060553 | MS.gene93688 | 0.804877 | 1.75E-49 | -1.69E-46 |
| MS.gene060553 | MS.gene94469 | 0.859238 | 4.75E-63 | -1.69E-46 |
| MS.gene060553 | MS.gene97157 | 0.80691 | 6.54E-50 | -1.69E-46 |
| MS.gene060553 | MS.gene98748 | 0.811128 | 8.17E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene66767 | MS.gene060553 | PPI |
| MS.gene060553 | MS.gene034468 | PPI |
| MS.gene060553 | MS.gene43051 | PPI |
| MS.gene060553 | MS.gene050322 | PPI |
| MS.gene060553 | MS.gene007227 | PPI |
| MS.gene060553 | MS.gene84339 | PPI |
| MS.gene060553 | MS.gene35396 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060553.t1 | MTR_4g113150 | 91.373 | 568 | 23 | 5 | 1 | 549 | 1 | 561 | 0.0 | 841 |
| MS.gene060553.t1 | MTR_4g113150 | 90.164 | 244 | 18 | 3 | 306 | 549 | 191 | 428 | 1.72e-137 | 405 |
| MS.gene060553.t1 | MTR_4g113150 | 84.064 | 251 | 20 | 4 | 1 | 238 | 1 | 244 | 3.71e-109 | 333 |
| MS.gene060553.t1 | MTR_5g070100 | 31.646 | 79 | 53 | 1 | 5 | 82 | 34 | 112 | 2.18e-11 | 66.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060553.t1 | AT5G19960 | 40.284 | 211 | 87 | 6 | 1 | 210 | 1 | 173 | 1.85e-31 | 125 |
| MS.gene060553.t1 | AT5G19960 | 41.379 | 116 | 66 | 1 | 425 | 540 | 221 | 334 | 1.29e-15 | 78.6 |
| MS.gene060553.t1 | AT5G19960 | 41.379 | 116 | 66 | 1 | 425 | 540 | 133 | 246 | 6.47e-16 | 78.2 |
| MS.gene060553.t1 | AT4G39260 | 43.373 | 83 | 46 | 1 | 10 | 91 | 9 | 91 | 6.54e-15 | 70.9 |
| MS.gene060553.t1 | AT3G47120 | 38.158 | 76 | 46 | 1 | 5 | 79 | 34 | 109 | 5.36e-12 | 67.4 |
| MS.gene060553.t1 | AT3G47120 | 38.158 | 76 | 46 | 1 | 5 | 79 | 34 | 109 | 8.34e-12 | 67.4 |
Find 142 sgRNAs with CRISPR-Local
Find 246 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGCCGTGTGGTTAAAGTTAA+TGG | 0.201362 | 8.2:+15330747 | MS.gene060553:CDS |
| GTTATGAATCAGACTATTAA+TGG | 0.247320 | 8.2:+15330726 | MS.gene060553:intron |
| GGTGGTGGCAGATCAAATTT+TGG | 0.252328 | 8.2:+15330801 | MS.gene060553:CDS |
| TCCTATCTCTGTCACGGTCT+CGG | 0.309537 | 8.2:-15331412 | None:intergenic |
| CGCACTGTCTTCAATTTGTA+TGG | 0.310277 | 8.2:+15330335 | MS.gene060553:CDS |
| GGTAAGACCACCAACGTAAA+TGG | 0.320146 | 8.2:-15330288 | None:intergenic |
| GGTGGAGGTGGCGGTGGTGG+TGG | 0.340367 | 8.2:+15330786 | MS.gene060553:CDS |
| GGCGGTGGAGGTGGCGGTGG+TGG | 0.354294 | 8.2:+15330783 | MS.gene060553:CDS |
| CATTACCATGATCATAATCT+TGG | 0.358631 | 8.2:-15330908 | None:intergenic |
| CCCTATTCCTATCATGGTCT+CGG | 0.364486 | 8.2:-15331226 | None:intergenic |
| GTGAGGTCTCGTGGCGGTGG+AGG | 0.372910 | 8.2:+15330771 | MS.gene060553:CDS |
| ATTGGAATCATGACGGTGAT+AGG | 0.374936 | 8.2:+15331594 | MS.gene060553:CDS |
| CCCAATCCCTGTCACGGTCT+CGG | 0.378313 | 8.2:-15331133 | None:intergenic |
| CCCGAGACCATGATAGGAAT+AGG | 0.387868 | 8.2:+15331225 | MS.gene060553:CDS |
| ATAGGTCTCGAGACCATGAT+AGG | 0.390177 | 8.2:+15331033 | MS.gene060553:CDS |
| CCCGAGACCGTGACAGGGAT+TGG | 0.391225 | 8.2:+15331132 | MS.gene060553:CDS |
| CCCTGTCACGGTCACGGTCT+CGG | 0.400331 | 8.2:-15331319 | None:intergenic |
| CTTACAAATGGAAGTCTAGA+TGG | 0.403989 | 8.2:+15333829 | MS.gene060553:CDS |
| AGGTCTCGTGGCGGTGGAGG+TGG | 0.410261 | 8.2:+15330774 | MS.gene060553:CDS |
| ATGATGAAAGGAATGGAGAT+TGG | 0.413487 | 8.2:+15330853 | MS.gene060553:CDS |
| CCTGTCACGGTCACGGTCTC+GGG | 0.417238 | 8.2:-15331318 | None:intergenic |
| GCCGTGTGGTTAAAGTTAAT+GGG | 0.420536 | 8.2:+15330748 | MS.gene060553:CDS |
| AAAGCGTGTTAGACCGTGAT+AGG | 0.423664 | 8.2:+15331294 | MS.gene060553:CDS |
| ATAGGTCCCGCGACCGTGAT+AGG | 0.424503 | 8.2:+15331015 | MS.gene060553:CDS |
| CGTGGCGGTGGAGGTGGCGG+TGG | 0.426158 | 8.2:+15330780 | MS.gene060553:CDS |
| AGAAAGAAGACTTAATGTTA+TGG | 0.428868 | 8.2:+15332451 | MS.gene060553:CDS |
| AAAGCATGTTAGATGATGAT+TGG | 0.430802 | 8.2:+15331576 | MS.gene060553:CDS |
| CCTATCTCTGTCACGGTCTC+GGG | 0.431431 | 8.2:-15331411 | None:intergenic |
| CCCGAGACCGTGACCGTGAC+AGG | 0.432306 | 8.2:+15331318 | MS.gene060553:CDS |
| TTCTAAGCTGGAAGAGGGAT+TGG | 0.434291 | 8.2:+15332427 | MS.gene060553:CDS |
| TTACCTTGGTCAACTGCATC+TGG | 0.438734 | 8.2:-15332658 | None:intergenic |
| TCTCGTGGCGGTGGAGGTGG+CGG | 0.438886 | 8.2:+15330777 | MS.gene060553:CDS |
| CCAATCCCTGTCACGGTCTC+GGG | 0.439937 | 8.2:-15331132 | None:intergenic |
| CAAGCTAGAGCAAGTATGTT+AGG | 0.441358 | 8.2:+15331191 | MS.gene060553:CDS |
| GGTGATGGTGATGGTGGTCT+TGG | 0.448887 | 8.2:+15333802 | MS.gene060553:CDS |
| ATCAATGACCAACGTACACT+TGG | 0.451190 | 8.2:+15330519 | MS.gene060553:CDS |
| CCGAGACCATGATAGGAATA+GGG | 0.451847 | 8.2:+15331226 | MS.gene060553:CDS |
| AAAGCATGTTAGTCCGTGAT+AGG | 0.455542 | 8.2:+15331108 | MS.gene060553:CDS |
| AACCATGATGTCACGGTCTC+GGG | 0.456700 | 8.2:-15331504 | None:intergenic |
| GGGGTGAGGTCTCGTGGCGG+TGG | 0.457192 | 8.2:+15330768 | MS.gene060553:CDS |
| TTCTATCCCTATTCCTATCA+TGG | 0.457624 | 8.2:-15331232 | None:intergenic |
| GGAGTTACAAAAGCACTCTA+AGG | 0.459318 | 8.2:+15332472 | MS.gene060553:CDS |
| GAGACCGTGACATCATGGTT+AGG | 0.463473 | 8.2:+15331507 | MS.gene060553:CDS |
| TGATAGGGCTGAAAATGAAC+TGG | 0.463823 | 8.2:+15331610 | MS.gene060553:CDS |
| CCGAGACCGTGACAGGGATT+GGG | 0.464916 | 8.2:+15331133 | MS.gene060553:CDS |
| TGATGAAAGGAATGGAGATT+GGG | 0.465545 | 8.2:+15330854 | MS.gene060553:CDS |
| CTCATCATTGTGGTCCCCAT+TGG | 0.467282 | 8.2:-15331910 | None:intergenic |
| CCCGAGACCGTGACAGAGAT+AGG | 0.470681 | 8.2:+15331411 | MS.gene060553:CDS |
| CGAGACCAAGATTATGATCA+TGG | 0.478575 | 8.2:+15330903 | MS.gene060553:CDS |
| AGAGGTCTCGAGACCGTGAT+AGG | 0.480387 | 8.2:+15330997 | MS.gene060553:CDS |
| GTAATGAGAAAGATGGATAC+AGG | 0.480470 | 8.2:+15330925 | MS.gene060553:CDS |
| AAAGATGGATACAGGAATAG+AGG | 0.481913 | 8.2:+15330933 | MS.gene060553:CDS |
| ACAGGAATAGAGGCAGTGAT+TGG | 0.482052 | 8.2:+15330943 | MS.gene060553:CDS |
| ATAGTCCATCAGATTCCAAT+GGG | 0.482340 | 8.2:+15331895 | MS.gene060553:CDS |
| TTCTATCCCTATCCCTATCA+TGG | 0.488329 | 8.2:-15331046 | None:intergenic |
| ACTGGAAAACAGCAGGGTAC+AGG | 0.494266 | 8.2:+15331628 | MS.gene060553:CDS |
| ATAGATCCCGAGACCATGAT+AGG | 0.494649 | 8.2:+15331219 | MS.gene060553:CDS |
| ATAGGTCCCGAGACCGTGAC+AGG | 0.495188 | 8.2:+15331126 | MS.gene060553:CDS |
| CCTATTCCTATCATGGTCTC+GGG | 0.495816 | 8.2:-15331225 | None:intergenic |
| TCGAGTCCAATCACCACCTC+TGG | 0.499545 | 8.2:-15330967 | None:intergenic |
| ATTGGACCAGAGGTGGTGAT+TGG | 0.502244 | 8.2:+15330961 | MS.gene060553:CDS |
| TAACCATGATGTCACGGTCT+CGG | 0.507957 | 8.2:-15331505 | None:intergenic |
| GGTCTTGGACAACTTACAAA+TGG | 0.508402 | 8.2:+15333817 | MS.gene060553:CDS |
| ACAGGGTGGAGATGTGGATA+AGG | 0.508614 | 8.2:+15331646 | MS.gene060553:CDS |
| AGACCGTGACATCATGGTTA+GGG | 0.509461 | 8.2:+15331508 | MS.gene060553:CDS |
| CATCATAATGATGAAAGGAA+TGG | 0.517662 | 8.2:+15330846 | MS.gene060553:CDS |
| CACGGTCTCGGGACCTATCA+CGG | 0.518091 | 8.2:-15331307 | None:intergenic |
| AAAATGAACTGGAAAACAGC+AGG | 0.521165 | 8.2:+15331621 | MS.gene060553:CDS |
| CTCGAGACCATGATAGGGAT+AGG | 0.523344 | 8.2:+15331039 | MS.gene060553:CDS |
| GAAAGCATGTTAGATTGTGA+TGG | 0.525220 | 8.2:+15331386 | MS.gene060553:CDS |
| TTGTAACTTTCACAAACCCT+AGG | 0.525397 | 8.2:+15330556 | MS.gene060553:CDS |
| TAGCATCAATTGCAGACCTA+GGG | 0.528965 | 8.2:-15330572 | None:intergenic |
| CACGGTCTCGGGACCTATCA+CGG | 0.531377 | 8.2:-15331121 | None:intergenic |
| GATAGCTCCATTTACGTTGG+TGG | 0.531498 | 8.2:+15330281 | MS.gene060553:CDS |
| GATCATGGTAATGAGAAAGA+TGG | 0.531558 | 8.2:+15330918 | MS.gene060553:CDS |
| CTGGATCCACATCTAAGTTA+CGG | 0.535060 | 8.2:-15331670 | None:intergenic |
| TCAGGTTTCTAAGCTGGAAG+AGG | 0.536137 | 8.2:+15332421 | MS.gene060553:intron |
| CACGGTCGCGGGACCTATCA+CGG | 0.541776 | 8.2:-15331010 | None:intergenic |
| CTCGAGACCTATCACGGTCG+CGG | 0.542402 | 8.2:-15331022 | None:intergenic |
| CTGGAAAACAGCAGGGTACA+GGG | 0.545302 | 8.2:+15331629 | MS.gene060553:CDS |
| CAGGTTTCTAAGCTGGAAGA+GGG | 0.546464 | 8.2:+15332422 | MS.gene060553:intron |
| TGTTTCATCAGTGGCGTCGA+AGG | 0.547171 | 8.2:-15330309 | None:intergenic |
| TTCTATCCCAATCCCTGTCA+CGG | 0.548745 | 8.2:-15331139 | None:intergenic |
| TTCTGCTCCTATCTCTGTCA+CGG | 0.549894 | 8.2:-15331418 | None:intergenic |
| GAGCATATGCAAAATTATGA+TGG | 0.550227 | 8.2:+15331074 | MS.gene060553:CDS |
| GTCCCGAGACCGTGACATCA+TGG | 0.550463 | 8.2:+15331502 | MS.gene060553:CDS |
| ATAGCATCAATTGCAGACCT+AGG | 0.550720 | 8.2:-15330573 | None:intergenic |
| GACTACCTTGACATCAAGAA+TGG | 0.552219 | 8.2:-15330360 | None:intergenic |
| AGAAGAGTTGAGCATTTGCA+AGG | 0.555050 | 8.2:+15331437 | MS.gene060553:CDS |
| TTATACCCCTGTCACGGTCA+CGG | 0.557856 | 8.2:-15331325 | None:intergenic |
| CCCCATTAACTTTAACCACA+CGG | 0.561289 | 8.2:-15330749 | None:intergenic |
| CAGGGTACAGGGTGGAGATG+TGG | 0.563252 | 8.2:+15331640 | MS.gene060553:CDS |
| AAAGCATGTTAGACCGCGAT+GGG | 0.565934 | 8.2:+15331480 | MS.gene060553:CDS |
| GAACACATGCTAGATTATGA+TGG | 0.568841 | 8.2:+15331167 | MS.gene060553:CDS |
| CATGGTCTCGGGATCTATCA+CGG | 0.573329 | 8.2:-15331214 | None:intergenic |
| TGGTCCCCATTGGAATCTGA+TGG | 0.575643 | 8.2:-15331900 | None:intergenic |
| TGGTTAAAGTTAATGGGGTG+AGG | 0.576628 | 8.2:+15330754 | MS.gene060553:CDS |
| TCTTACTCGATGTTTCTCCT+CGG | 0.578233 | 8.2:-15331755 | None:intergenic |
| ATTATCATCATAATGATGAA+AGG | 0.578991 | 8.2:+15330841 | MS.gene060553:CDS |
| AATAGTCCATCAGATTCCAA+TGG | 0.582473 | 8.2:+15331894 | MS.gene060553:CDS |
| AGGAATGGAGATTGGGATCG+TGG | 0.582856 | 8.2:+15330861 | MS.gene060553:CDS |
| TCGAGACCATGATAGGGATA+GGG | 0.583018 | 8.2:+15331040 | MS.gene060553:CDS |
| GAAAGCATGTTAGACCGCGA+TGG | 0.583363 | 8.2:+15331479 | MS.gene060553:CDS |
| TGGCGCCATTCTTGATGTCA+AGG | 0.589109 | 8.2:+15330355 | MS.gene060553:CDS |
| CATGGTCTCGAGACCTATCA+CGG | 0.589442 | 8.2:-15331028 | None:intergenic |
| GTTAATGGGGTGAGGTCTCG+TGG | 0.592393 | 8.2:+15330762 | MS.gene060553:CDS |
| TTGGAATCATGACGGTGATA+GGG | 0.593640 | 8.2:+15331595 | MS.gene060553:CDS |
| TCGAGACCTATCACGGTCGC+GGG | 0.594735 | 8.2:-15331021 | None:intergenic |
| GGCAGTGATTGGACCAGAGG+TGG | 0.596616 | 8.2:+15330954 | MS.gene060553:CDS |
| CCGAGACCGTGACCGTGACA+GGG | 0.596911 | 8.2:+15331319 | MS.gene060553:CDS |
| AAAGCATGTTAGATTGTGAT+GGG | 0.597103 | 8.2:+15331387 | MS.gene060553:CDS |
| ATTGGACTCGACAGCATCAG+AGG | 0.597239 | 8.2:+15330979 | MS.gene060553:CDS |
| GAGAGTGACGGTGATGGTGA+TGG | 0.598421 | 8.2:+15333793 | MS.gene060553:CDS |
| TCAATGACCAACGTACACTT+GGG | 0.603480 | 8.2:+15330520 | MS.gene060553:CDS |
| TCAATATTGTTCGAGAGTGA+CGG | 0.605658 | 8.2:+15333781 | MS.gene060553:CDS |
| AGTGCGAATTGTTTCATCAG+TGG | 0.616718 | 8.2:-15330318 | None:intergenic |
| TAAGGACCGTAACTTAGATG+TGG | 0.622168 | 8.2:+15331664 | MS.gene060553:CDS |
| TCAGTTCCACAAAATGACAC+TGG | 0.624699 | 8.2:+15330253 | None:intergenic |
| AGAGGCAGTGATTGGACCAG+AGG | 0.630012 | 8.2:+15330951 | MS.gene060553:CDS |
| AGCATTTCCCAAGTGTACGT+TGG | 0.632194 | 8.2:-15330527 | None:intergenic |
| GATGCTATCAACGATATGAA+CGG | 0.633466 | 8.2:+15330588 | MS.gene060553:CDS |
| TATCCCTAACCATGATGTCA+CGG | 0.634194 | 8.2:-15331511 | None:intergenic |
| ATCACATTACCTCATCATTG+TGG | 0.638871 | 8.2:-15331920 | None:intergenic |
| TAGGTCTCGAGACCATGATA+GGG | 0.644021 | 8.2:+15331034 | MS.gene060553:CDS |
| CACGGTCTCGGGACCCATCG+CGG | 0.649874 | 8.2:-15331493 | None:intergenic |
| AGTGACGGTGATGGTGATGG+TGG | 0.650592 | 8.2:+15333796 | MS.gene060553:CDS |
| GATGATAGCTCCATTTACGT+TGG | 0.659955 | 8.2:+15330278 | MS.gene060553:CDS |
| AGGTAGAAGATGAATTAGAG+AGG | 0.662402 | 8.2:+15332079 | MS.gene060553:intron |
| CGAGACCGTGACCGTGACAG+GGG | 0.664208 | 8.2:+15331320 | MS.gene060553:CDS |
| CAATGGGGACCACAATGATG+AGG | 0.667084 | 8.2:+15331911 | MS.gene060553:CDS |
| TCGCCAGATGCAGTTGACCA+AGG | 0.667948 | 8.2:+15332655 | MS.gene060553:CDS |
| TTGTTCGAGAGTGACGGTGA+TGG | 0.673128 | 8.2:+15333787 | MS.gene060553:CDS |
| AAATGAACTGGAAAACAGCA+GGG | 0.689851 | 8.2:+15331622 | MS.gene060553:CDS |
| ATATTTACCGCAGAAACGGG+AGG | 0.695680 | 8.2:+15332598 | MS.gene060553:intron |
| AATGGGGTGAGGTCTCGTGG+CGG | 0.699964 | 8.2:+15330765 | MS.gene060553:CDS |
| GATGATGATTGGAATCATGA+CGG | 0.709264 | 8.2:+15331587 | MS.gene060553:CDS |
| TAGGTCCCGAGACCGTGACA+GGG | 0.714552 | 8.2:+15331127 | MS.gene060553:CDS |
| CCGTGTGGTTAAAGTTAATG+GGG | 0.715692 | 8.2:+15330749 | MS.gene060553:CDS |
| TCAGACTATTAATGGCCGTG+TGG | 0.721965 | 8.2:+15330734 | MS.gene060553:intron |
| AATGGAGATTGGGATCGTGG+CGG | 0.727702 | 8.2:+15330864 | MS.gene060553:CDS |
| GAAAACAGCAGGGTACAGGG+TGG | 0.744053 | 8.2:+15331632 | MS.gene060553:CDS |
| TAGTCCATCAGATTCCAATG+GGG | 0.775487 | 8.2:+15331896 | MS.gene060553:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGAAATTAAATAATTAACA+AGG | - | chr8.2:15330423-15330442 | None:intergenic | 10.0% |
| !! | AGAAATTAAATAATTAACAA+GGG | - | chr8.2:15330422-15330441 | None:intergenic | 10.0% |
| !! | AAACTAAAATGAATGAATAA+TGG | + | chr8.2:15332151-15332170 | MS.gene060553:intron | 15.0% |
| !! | AATAATCAATTCAAGTAATT+GGG | + | chr8.2:15330448-15330467 | MS.gene060553:intron | 15.0% |
| !! | TAATAATCAATTCAAGTAAT+TGG | + | chr8.2:15330447-15330466 | MS.gene060553:intron | 15.0% |
| !! | TTATCAAACATTCAAATATT+GGG | - | chr8.2:15332286-15332305 | None:intergenic | 15.0% |
| !! | TTTATCAAACATTCAAATAT+TGG | - | chr8.2:15332287-15332306 | None:intergenic | 15.0% |
| !!! | AAAATATAACTTTTTGGAAA+AGG | - | chr8.2:15333154-15333173 | None:intergenic | 15.0% |
| !!! | AAATATAACTTTTTGGAAAA+GGG | - | chr8.2:15333153-15333172 | None:intergenic | 15.0% |
| !! | AAACATTGCTTAAAATAATG+TGG | - | chr8.2:15333371-15333390 | None:intergenic | 20.0% |
| !! | AATGTTTAAATTTCACAATG+TGG | + | chr8.2:15332908-15332927 | MS.gene060553:intron | 20.0% |
| !! | AGTTTATTTGTGTTAATGTT+TGG | + | chr8.2:15330649-15330668 | MS.gene060553:intron | 20.0% |
| !! | ATTATCATCATAATGATGAA+AGG | + | chr8.2:15330841-15330860 | MS.gene060553:CDS | 20.0% |
| !! | GTAAAAACAAGATTAAAATG+TGG | - | chr8.2:15332042-15332061 | None:intergenic | 20.0% |
| !! | TAAACATTATAAAAAGTCAC+AGG | - | chr8.2:15332896-15332915 | None:intergenic | 20.0% |
| !! | TAAATGATATTGCTAACATT+GGG | + | chr8.2:15332718-15332737 | MS.gene060553:intron | 20.0% |
| !!! | AATATAACTTTTTGGAAAAG+GGG | - | chr8.2:15333152-15333171 | None:intergenic | 20.0% |
| !!! | ATAATGGAAATTTGTCAATA+TGG | + | chr8.2:15332167-15332186 | MS.gene060553:intron | 20.0% |
| !!! | TTGATTTTCTAATCATTCAT+AGG | - | chr8.2:15333346-15333365 | None:intergenic | 20.0% |
| ! | AAGAAAAACAAGAAATAAGC+TGG | - | chr8.2:15333683-15333702 | None:intergenic | 25.0% |
| ! | AGAAAGAAGACTTAATGTTA+TGG | + | chr8.2:15332451-15332470 | MS.gene060553:CDS | 25.0% |
| ! | ATATATATAAGACACAAACC+TGG | - | chr8.2:15332829-15332848 | None:intergenic | 25.0% |
| ! | ATTAATTAAGCTCCATAAAG+GGG | + | chr8.2:15333393-15333412 | MS.gene060553:intron | 25.0% |
| ! | CATTAATTAAGCTCCATAAA+GGG | + | chr8.2:15333392-15333411 | MS.gene060553:intron | 25.0% |
| ! | GTAAATGATATTGCTAACAT+TGG | + | chr8.2:15332717-15332736 | MS.gene060553:intron | 25.0% |
| ! | GTTATGAATCAGACTATTAA+TGG | + | chr8.2:15330726-15330745 | MS.gene060553:intron | 25.0% |
| ! | TAATTTCAGAGATATTTCCA+TGG | - | chr8.2:15333177-15333196 | None:intergenic | 25.0% |
| ! | TTAAAACTTAGACATTACCT+TGG | - | chr8.2:15332675-15332694 | None:intergenic | 25.0% |
| !! | ATGTTTGGTAATTATTGTTG+TGG | + | chr8.2:15330664-15330683 | MS.gene060553:intron | 25.0% |
| !! | CCAAAAAGTTATATTTTCCA+TGG | + | chr8.2:15333157-15333176 | MS.gene060553:intron | 25.0% |
| !! | CCATGGAAAATATAACTTTT+TGG | - | chr8.2:15333160-15333179 | None:intergenic | 25.0% |
| !! | TATGCTGAGTTAATTTTTGT+TGG | + | chr8.2:15333739-15333758 | MS.gene060553:intron | 25.0% |
| !! | TTTTTCTCCTTTTTATGTGT+TGG | + | chr8.2:15332375-15332394 | MS.gene060553:intron | 25.0% |
| !!! | TTTTATTTTAGACCCCTTTA+TGG | - | chr8.2:15333408-15333427 | None:intergenic | 25.0% |
| AAAGCATGTTAGATGATGAT+TGG | + | chr8.2:15331576-15331595 | MS.gene060553:CDS | 30.0% | |
| AAAGCATGTTAGATTGTGAT+GGG | + | chr8.2:15331387-15331406 | MS.gene060553:CDS | 30.0% | |
| AACATAAAAAAGAACAACCG+AGG | + | chr8.2:15331738-15331757 | MS.gene060553:CDS | 30.0% | |
| ACTGCTTGATCAACTAAAAA+AGG | + | chr8.2:15332110-15332129 | MS.gene060553:CDS | 30.0% | |
| AGATTATGGTGGCAAAAAAT+TGG | + | chr8.2:15333442-15333461 | MS.gene060553:intron | 30.0% | |
| ATGCTTGGAAATAAATGAGA+AGG | - | chr8.2:15332500-15332519 | None:intergenic | 30.0% | |
| ATGTCACAGAAAATTAACAG+AGG | - | chr8.2:15331784-15331803 | None:intergenic | 30.0% | |
| CAAGAAATAAGCTGGATTAT+AGG | - | chr8.2:15333675-15333694 | None:intergenic | 30.0% | |
| CAATCTCAAAATTTGATGCT+TGG | - | chr8.2:15332515-15332534 | None:intergenic | 30.0% | |
| CATCATAATGATGAAAGGAA+TGG | + | chr8.2:15330846-15330865 | MS.gene060553:CDS | 30.0% | |
| CATTACCATGATCATAATCT+TGG | - | chr8.2:15330911-15330930 | None:intergenic | 30.0% | |
| CCATTAATTAAGCTCCATAA+AGG | + | chr8.2:15333391-15333410 | MS.gene060553:intron | 30.0% | |
| CCTTTATGGAGCTTAATTAA+TGG | - | chr8.2:15333394-15333413 | None:intergenic | 30.0% | |
| GAAAATCAATTGCATGTCAT+TGG | - | chr8.2:15333267-15333286 | None:intergenic | 30.0% | |
| GAAATGCAAAAGTAGCTATT+AGG | + | chr8.2:15333499-15333518 | MS.gene060553:intron | 30.0% | |
| GAATGTTTGATAAATGCGTT+AGG | + | chr8.2:15332293-15332312 | MS.gene060553:intron | 30.0% | |
| GACGATAGAGAATCATTATA+TGG | + | chr8.2:15333065-15333084 | MS.gene060553:intron | 30.0% | |
| GAGCATATGCAAAATTATGA+TGG | + | chr8.2:15331074-15331093 | MS.gene060553:CDS | 30.0% | |
| GTTAATTTCCAACTGTTCTT+TGG | + | chr8.2:15331806-15331825 | MS.gene060553:intron | 30.0% | |
| TAAATTTCACAATGTGGCTT+AGG | + | chr8.2:15332914-15332933 | MS.gene060553:intron | 30.0% | |
| TAAGTAAACCAAAGAACAGT+TGG | - | chr8.2:15331817-15331836 | None:intergenic | 30.0% | |
| TCTATCGTCAACATAATTCA+AGG | - | chr8.2:15333054-15333073 | None:intergenic | 30.0% | |
| ! | AAGTGAATTCCTTGTTATCA+AGG | + | chr8.2:15333522-15333541 | MS.gene060553:intron | 30.0% |
| ! | ATTCCTTGTTATCAAGGAAA+TGG | + | chr8.2:15333528-15333547 | MS.gene060553:intron | 30.0% |
| ! | GGTTATGATTTGAGAGTTTT+TGG | + | chr8.2:15330690-15330709 | MS.gene060553:intron | 30.0% |
| ! | TGTTCGTCAAAACTTTTATC+AGG | - | chr8.2:15331722-15331741 | None:intergenic | 30.0% |
| !! | TTCTCTTTAAAGTGTTAGCA+CGG | + | chr8.2:15333224-15333243 | MS.gene060553:intron | 30.0% |
| !!! | CTTGTTTTTACTTGCTTTTG+TGG | + | chr8.2:15332051-15332070 | MS.gene060553:intron | 30.0% |
| !!! | GTTAATTTTTGTTGGTTTGC+AGG | + | chr8.2:15333747-15333766 | MS.gene060553:intron | 30.0% |
| !!! | TTTTTTGCCACCATAATCTA+TGG | - | chr8.2:15333441-15333460 | None:intergenic | 30.0% |
| AAAATGAACTGGAAAACAGC+AGG | + | chr8.2:15331621-15331640 | MS.gene060553:CDS | 35.0% | |
| AAACCAAGACCATATTCACA+AGG | - | chr8.2:15333617-15333636 | None:intergenic | 35.0% | |
| AAAGATGGATACAGGAATAG+AGG | + | chr8.2:15330933-15330952 | MS.gene060553:CDS | 35.0% | |
| AAATGAACTGGAAAACAGCA+GGG | + | chr8.2:15331622-15331641 | MS.gene060553:CDS | 35.0% | |
| AAGATATTTACCGCAGAAAC+GGG | + | chr8.2:15332595-15332614 | MS.gene060553:intron | 35.0% | |
| AATAGTCCATCAGATTCCAA+TGG | + | chr8.2:15331894-15331913 | MS.gene060553:CDS | 35.0% | |
| ACTTATGTGCGAAGTTGTAA+TGG | + | chr8.2:15333477-15333496 | MS.gene060553:intron | 35.0% | |
| AGAGATCTTTCAAATCTCAG+GGG | - | chr8.2:15333567-15333586 | None:intergenic | 35.0% | |
| AGGTAGAAGATGAATTAGAG+AGG | + | chr8.2:15332079-15332098 | MS.gene060553:intron | 35.0% | |
| ATAGTCCATCAGATTCCAAT+GGG | + | chr8.2:15331895-15331914 | MS.gene060553:CDS | 35.0% | |
| ATATTGCTAACATTGGGCTT+GGG | + | chr8.2:15332724-15332743 | MS.gene060553:intron | 35.0% | |
| ATCACATTACCTCATCATTG+TGG | - | chr8.2:15331923-15331942 | None:intergenic | 35.0% | |
| ATCCAGACAAAAAGATGGAA+AGG | + | chr8.2:15331687-15331706 | MS.gene060553:CDS | 35.0% | |
| ATGATGAAAGGAATGGAGAT+TGG | + | chr8.2:15330853-15330872 | MS.gene060553:CDS | 35.0% | |
| ATTCAAACTGCAGGAAAATC+AGG | - | chr8.2:15331862-15331881 | None:intergenic | 35.0% | |
| ATTTGTCACATTCAAACTGC+AGG | - | chr8.2:15331871-15331890 | None:intergenic | 35.0% | |
| CAGAGATCTTTCAAATCTCA+GGG | - | chr8.2:15333568-15333587 | None:intergenic | 35.0% | |
| CCATAATCTATGGCATAAGA+TGG | - | chr8.2:15333431-15333450 | None:intergenic | 35.0% | |
| CCATCTTATGCCATAGATTA+TGG | + | chr8.2:15333428-15333447 | MS.gene060553:intron | 35.0% | |
| CTTACAAATGGAAGTCTAGA+TGG | + | chr8.2:15333829-15333848 | MS.gene060553:CDS | 35.0% | |
| GAACACATGCTAGATTATGA+TGG | + | chr8.2:15331167-15331186 | MS.gene060553:CDS | 35.0% | |
| GAAGATATTTACCGCAGAAA+CGG | + | chr8.2:15332594-15332613 | MS.gene060553:intron | 35.0% | |
| GAGATTTGAAAGATCTCTGA+TGG | + | chr8.2:15333569-15333588 | MS.gene060553:intron | 35.0% | |
| GATGATGATTGGAATCATGA+CGG | + | chr8.2:15331587-15331606 | MS.gene060553:CDS | 35.0% | |
| GATGCTATCAACGATATGAA+CGG | + | chr8.2:15330588-15330607 | MS.gene060553:CDS | 35.0% | |
| GCTTGATCAACTAAAAAAGG+AGG | + | chr8.2:15332113-15332132 | MS.gene060553:CDS | 35.0% | |
| GTAATGAGAAAGATGGATAC+AGG | + | chr8.2:15330925-15330944 | MS.gene060553:CDS | 35.0% | |
| TCAATATTGTTCGAGAGTGA+CGG | + | chr8.2:15333781-15333800 | MS.gene060553:CDS | 35.0% | |
| TCAGAGATCTTTCAAATCTC+AGG | - | chr8.2:15333569-15333588 | None:intergenic | 35.0% | |
| TCTGAACATGTGCATTTCAA+AGG | + | chr8.2:15332257-15332276 | MS.gene060553:intron | 35.0% | |
| TCTTATGCCATAGATTATGG+TGG | + | chr8.2:15333431-15333450 | MS.gene060553:intron | 35.0% | |
| TGATGAAAGGAATGGAGATT+GGG | + | chr8.2:15330854-15330873 | MS.gene060553:CDS | 35.0% | |
| TGTGTTCAAAGTAAGGATGT+TGG | - | chr8.2:15332550-15332569 | None:intergenic | 35.0% | |
| TTCTATCCCTATTCCTATCA+TGG | - | chr8.2:15331235-15331254 | None:intergenic | 35.0% | |
| TTGTAACTTTCACAAACCCT+AGG | + | chr8.2:15330556-15330575 | MS.gene060553:CDS | 35.0% | |
| ! | ATCCTTTCCATCTTTTTGTC+TGG | - | chr8.2:15331692-15331711 | None:intergenic | 35.0% |
| ! | ATTTTGTCAGGTTTCTAAGC+TGG | + | chr8.2:15332415-15332434 | MS.gene060553:intron | 35.0% |
| ! | CAGCTTTTGTGTTCAAAGTA+AGG | - | chr8.2:15332557-15332576 | None:intergenic | 35.0% |
| ! | CTGAAAAGTGGAATTTTGTC+AGG | + | chr8.2:15332403-15332422 | MS.gene060553:intron | 35.0% |
| ! | GAAAAATCTCTGCAGTTTTG+TGG | + | chr8.2:15332981-15333000 | MS.gene060553:intron | 35.0% |
| ! | GAAAGCATGTTAGATTGTGA+TGG | + | chr8.2:15331386-15331405 | MS.gene060553:CDS | 35.0% |
| ! | GATCATGGTAATGAGAAAGA+TGG | + | chr8.2:15330918-15330937 | MS.gene060553:CDS | 35.0% |
| ! | TCGATTTGACCTTGTGAATA+TGG | + | chr8.2:15333605-15333624 | MS.gene060553:intron | 35.0% |
| ! | TTAAAGATTAGAGCGCTTGT+TGG | - | chr8.2:15332348-15332367 | None:intergenic | 35.0% |
| ! | TTCTCCTTTTTATGTGTTGG+TGG | + | chr8.2:15332378-15332397 | MS.gene060553:intron | 35.0% |
| ! | TTGTGAATATGGTCTTGGTT+TGG | + | chr8.2:15333616-15333635 | MS.gene060553:intron | 35.0% |
| !! | CGTATTTACTTAACTTGTGC+TGG | + | chr8.2:15333711-15333730 | MS.gene060553:intron | 35.0% |
| !! | TCTCTTTAAAGTGTTAGCAC+GGG | + | chr8.2:15333225-15333244 | MS.gene060553:intron | 35.0% |
| !!! | ACTGGTTTTAAGTCTTTCTG+TGG | - | chr8.2:15332795-15332814 | None:intergenic | 35.0% |
| AAAGCATGTTAGTCCGTGAT+AGG | + | chr8.2:15331108-15331127 | MS.gene060553:CDS | 40.0% | |
| AAATGTGGCAGAATCAGTCT+CGG | - | chr8.2:15332027-15332046 | None:intergenic | 40.0% | |
| AACCAGTGAAAAAGAACTCC+AGG | + | chr8.2:15332808-15332827 | MS.gene060553:CDS | 40.0% | |
| AGAAAACATTCATGCAGCTG+AGG | - | chr8.2:15332758-15332777 | None:intergenic | 40.0% | |
| AGAAGAGTTGAGCATTTGCA+AGG | + | chr8.2:15331437-15331456 | MS.gene060553:CDS | 40.0% | |
| AGCACCACCAACACATAAAA+AGG | - | chr8.2:15332385-15332404 | None:intergenic | 40.0% | |
| AGTGCGAATTGTTTCATCAG+TGG | - | chr8.2:15330321-15330340 | None:intergenic | 40.0% | |
| ATAGCATCAATTGCAGACCT+AGG | - | chr8.2:15330576-15330595 | None:intergenic | 40.0% | |
| ATCAATGACCAACGTACACT+TGG | + | chr8.2:15330519-15330538 | MS.gene060553:CDS | 40.0% | |
| ATTGGAATCATGACGGTGAT+AGG | + | chr8.2:15331594-15331613 | MS.gene060553:CDS | 40.0% | |
| CAAGCTAGAGCAAGTATGTT+AGG | + | chr8.2:15331191-15331210 | MS.gene060553:CDS | 40.0% | |
| CCCCATTAACTTTAACCACA+CGG | - | chr8.2:15330752-15330771 | None:intergenic | 40.0% | |
| CCGTGTGGTTAAAGTTAATG+GGG | + | chr8.2:15330749-15330768 | MS.gene060553:CDS | 40.0% | |
| CGAGACCAAGATTATGATCA+TGG | + | chr8.2:15330903-15330922 | MS.gene060553:CDS | 40.0% | |
| CGCACTGTCTTCAATTTGTA+TGG | + | chr8.2:15330335-15330354 | MS.gene060553:CDS | 40.0% | |
| CTGGATCCACATCTAAGTTA+CGG | - | chr8.2:15331673-15331692 | None:intergenic | 40.0% | |
| GACTACCTTGACATCAAGAA+TGG | - | chr8.2:15330363-15330382 | None:intergenic | 40.0% | |
| GATATTGCTAACATTGGGCT+TGG | + | chr8.2:15332723-15332742 | MS.gene060553:intron | 40.0% | |
| GATGATAGCTCCATTTACGT+TGG | + | chr8.2:15330278-15330297 | MS.gene060553:CDS | 40.0% | |
| GCCGTGTGGTTAAAGTTAAT+GGG | + | chr8.2:15330748-15330767 | MS.gene060553:CDS | 40.0% | |
| GGTCTTGGACAACTTACAAA+TGG | + | chr8.2:15333817-15333836 | MS.gene060553:CDS | 40.0% | |
| TAAGGACCGTAACTTAGATG+TGG | + | chr8.2:15331664-15331683 | MS.gene060553:CDS | 40.0% | |
| TAGCATCAATTGCAGACCTA+GGG | - | chr8.2:15330575-15330594 | None:intergenic | 40.0% | |
| TAGTCCATCAGATTCCAATG+GGG | + | chr8.2:15331896-15331915 | MS.gene060553:CDS | 40.0% | |
| TATATGGTGCAGTTGTATGC+AGG | + | chr8.2:15333081-15333100 | MS.gene060553:intron | 40.0% | |
| TATCCCTAACCATGATGTCA+CGG | - | chr8.2:15331514-15331533 | None:intergenic | 40.0% | |
| TCAATGACCAACGTACACTT+GGG | + | chr8.2:15330520-15330539 | MS.gene060553:CDS | 40.0% | |
| TCTTACTCGATGTTTCTCCT+CGG | - | chr8.2:15331758-15331777 | None:intergenic | 40.0% | |
| TGACCTTGTGAATATGGTCT+TGG | + | chr8.2:15333611-15333630 | MS.gene060553:intron | 40.0% | |
| TGATAGGGCTGAAAATGAAC+TGG | + | chr8.2:15331610-15331629 | MS.gene060553:CDS | 40.0% | |
| TGGTAATTATTGTTGTGGCG+TGG | + | chr8.2:15330669-15330688 | MS.gene060553:intron | 40.0% | |
| TGGTTAAAGTTAATGGGGTG+AGG | + | chr8.2:15330754-15330773 | MS.gene060553:CDS | 40.0% | |
| TGTGGATCCAGACAAAAAGA+TGG | + | chr8.2:15331682-15331701 | MS.gene060553:CDS | 40.0% | |
| TTCTATCCCTATCCCTATCA+TGG | - | chr8.2:15331049-15331068 | None:intergenic | 40.0% | |
| TTGGAATCATGACGGTGATA+GGG | + | chr8.2:15331595-15331614 | MS.gene060553:CDS | 40.0% | |
| ! | CAACTTTTATACCCCTGTCA+CGG | - | chr8.2:15331334-15331353 | None:intergenic | 40.0% |
| ! | CAGCCATTTCCTTGATAACA+AGG | - | chr8.2:15333534-15333553 | None:intergenic | 40.0% |
| ! | GCACGGGTATTTGTATTTTG+AGG | + | chr8.2:15333241-15333260 | MS.gene060553:intron | 40.0% |
| ! | GTGGTGGCAGATCAAATTTT+GGG | + | chr8.2:15330802-15330821 | MS.gene060553:CDS | 40.0% |
| !! | AACCTGGAGTTCTTTTTCAC+TGG | - | chr8.2:15332813-15332832 | None:intergenic | 40.0% |
| !! | GGAGTTACAAAAGCACTCTA+AGG | + | chr8.2:15332472-15332491 | MS.gene060553:CDS | 40.0% |
| !! | TACTTGCTTTTGTGGTCTTC+AGG | + | chr8.2:15332059-15332078 | MS.gene060553:intron | 40.0% |
| AAAGCATGTTAGACCGCGAT+GGG | + | chr8.2:15331480-15331499 | MS.gene060553:CDS | 45.0% | |
| AAAGCGTGTTAGACCGTGAT+AGG | + | chr8.2:15331294-15331313 | MS.gene060553:CDS | 45.0% | |
| ACAGGAATAGAGGCAGTGAT+TGG | + | chr8.2:15330943-15330962 | MS.gene060553:CDS | 45.0% | |
| AGACCGTGACATCATGGTTA+GGG | + | chr8.2:15331508-15331527 | MS.gene060553:CDS | 45.0% | |
| AGCATTTCCCAAGTGTACGT+TGG | - | chr8.2:15330530-15330549 | None:intergenic | 45.0% | |
| ATAGATCCCGAGACCATGAT+AGG | + | chr8.2:15331219-15331238 | MS.gene060553:CDS | 45.0% | |
| ATAGGTCTCGAGACCATGAT+AGG | + | chr8.2:15331033-15331052 | MS.gene060553:CDS | 45.0% | |
| ATATTTACCGCAGAAACGGG+AGG | + | chr8.2:15332598-15332617 | MS.gene060553:intron | 45.0% | |
| CAGGTTTCTAAGCTGGAAGA+GGG | + | chr8.2:15332422-15332441 | MS.gene060553:intron | 45.0% | |
| CCCTATTCCTATCATGGTCT+CGG | - | chr8.2:15331229-15331248 | None:intergenic | 45.0% | |
| CCGAGACCATGATAGGAATA+GGG | + | chr8.2:15331226-15331245 | MS.gene060553:CDS | 45.0% | |
| CCTATTCCTATCATGGTCTC+GGG | - | chr8.2:15331228-15331247 | None:intergenic | 45.0% | |
| GATAGCTCCATTTACGTTGG+TGG | + | chr8.2:15330281-15330300 | MS.gene060553:CDS | 45.0% | |
| GGCCGTGTGGTTAAAGTTAA+TGG | + | chr8.2:15330747-15330766 | MS.gene060553:CDS | 45.0% | |
| GGTAAGACCACCAACGTAAA+TGG | - | chr8.2:15330291-15330310 | None:intergenic | 45.0% | |
| TAACCATGATGTCACGGTCT+CGG | - | chr8.2:15331508-15331527 | None:intergenic | 45.0% | |
| TAGGTCTCGAGACCATGATA+GGG | + | chr8.2:15331034-15331053 | MS.gene060553:CDS | 45.0% | |
| TCAGACTATTAATGGCCGTG+TGG | + | chr8.2:15330734-15330753 | MS.gene060553:intron | 45.0% | |
| TCAGGTTTCTAAGCTGGAAG+AGG | + | chr8.2:15332421-15332440 | MS.gene060553:intron | 45.0% | |
| TCGAGACCATGATAGGGATA+GGG | + | chr8.2:15331040-15331059 | MS.gene060553:CDS | 45.0% | |
| TTACCTTGGTCAACTGCATC+TGG | - | chr8.2:15332661-15332680 | None:intergenic | 45.0% | |
| TTCTAAGCTGGAAGAGGGAT+TGG | + | chr8.2:15332427-15332446 | MS.gene060553:CDS | 45.0% | |
| TTCTATCCCAATCCCTGTCA+CGG | - | chr8.2:15331142-15331161 | None:intergenic | 45.0% | |
| TTCTGCTCCTATCTCTGTCA+CGG | - | chr8.2:15331421-15331440 | None:intergenic | 45.0% | |
| !! | GGTGGTGGCAGATCAAATTT+TGG | + | chr8.2:15330801-15330820 | MS.gene060553:CDS | 45.0% |
| !! | AAAGTAAAATTAATAATAAA+TGG | - | chr8.2:15333015-15333034 | None:intergenic | 5.0% |
| !! | TAAAAAAAAATACAATAATA+TGG | - | chr8.2:15330630-15330649 | None:intergenic | 5.0% |
| AACCATGATGTCACGGTCTC+GGG | - | chr8.2:15331507-15331526 | None:intergenic | 50.0% | |
| AATGGAGATTGGGATCGTGG+CGG | + | chr8.2:15330864-15330883 | MS.gene060553:CDS | 50.0% | |
| ACAGGGTGGAGATGTGGATA+AGG | + | chr8.2:15331646-15331665 | MS.gene060553:CDS | 50.0% | |
| ACTGGAAAACAGCAGGGTAC+AGG | + | chr8.2:15331628-15331647 | MS.gene060553:CDS | 50.0% | |
| AGGAATGGAGATTGGGATCG+TGG | + | chr8.2:15330861-15330880 | MS.gene060553:CDS | 50.0% | |
| ATTGGACCAGAGGTGGTGAT+TGG | + | chr8.2:15330961-15330980 | MS.gene060553:CDS | 50.0% | |
| ATTGGACTCGACAGCATCAG+AGG | + | chr8.2:15330979-15330998 | MS.gene060553:CDS | 50.0% | |
| CAATGGGGACCACAATGATG+AGG | + | chr8.2:15331911-15331930 | MS.gene060553:CDS | 50.0% | |
| CATGGTCTCGAGACCTATCA+CGG | - | chr8.2:15331031-15331050 | None:intergenic | 50.0% | |
| CATGGTCTCGGGATCTATCA+CGG | - | chr8.2:15331217-15331236 | None:intergenic | 50.0% | |
| CCCGAGACCATGATAGGAAT+AGG | + | chr8.2:15331225-15331244 | MS.gene060553:CDS | 50.0% | |
| CTCATCATTGTGGTCCCCAT+TGG | - | chr8.2:15331913-15331932 | None:intergenic | 50.0% | |
| CTCGAGACCATGATAGGGAT+AGG | + | chr8.2:15331039-15331058 | MS.gene060553:CDS | 50.0% | |
| CTGGAAAACAGCAGGGTACA+GGG | + | chr8.2:15331629-15331648 | MS.gene060553:CDS | 50.0% | |
| GAGACCGTGACATCATGGTT+AGG | + | chr8.2:15331507-15331526 | MS.gene060553:CDS | 50.0% | |
| TCCTATCTCTGTCACGGTCT+CGG | - | chr8.2:15331415-15331434 | None:intergenic | 50.0% | |
| TGGCGCCATTCTTGATGTCA+AGG | + | chr8.2:15330355-15330374 | MS.gene060553:CDS | 50.0% | |
| TGGTCCCCATTGGAATCTGA+TGG | - | chr8.2:15331903-15331922 | None:intergenic | 50.0% | |
| TTATACCCCTGTCACGGTCA+CGG | - | chr8.2:15331328-15331347 | None:intergenic | 50.0% | |
| TTGTTCGAGAGTGACGGTGA+TGG | + | chr8.2:15333787-15333806 | MS.gene060553:CDS | 50.0% | |
| ! | ATGGCGATGTCTGCTCTAGA+AGG | + | chr8.2:15332186-15332205 | MS.gene060553:intron | 50.0% |
| ! | GAAAGCATGTTAGACCGCGA+TGG | + | chr8.2:15331479-15331498 | MS.gene060553:CDS | 50.0% |
| ! | TGTTTCATCAGTGGCGTCGA+AGG | - | chr8.2:15330312-15330331 | None:intergenic | 50.0% |
| !! | GTGTTGGTGGTGCTGAAAAG+TGG | + | chr8.2:15332391-15332410 | MS.gene060553:intron | 50.0% |
| ACAGCATCCTCCCGTTTCTG+CGG | - | chr8.2:15332608-15332627 | None:intergenic | 55.0% | |
| AGAGGCAGTGATTGGACCAG+AGG | + | chr8.2:15330951-15330970 | MS.gene060553:CDS | 55.0% | |
| AGAGGTCTCGAGACCGTGAT+AGG | + | chr8.2:15330997-15331016 | MS.gene060553:CDS | 55.0% | |
| CCTATCTCTGTCACGGTCTC+GGG | - | chr8.2:15331414-15331433 | None:intergenic | 55.0% | |
| GAAAACAGCAGGGTACAGGG+TGG | + | chr8.2:15331632-15331651 | MS.gene060553:CDS | 55.0% | |
| GTTAATGGGGTGAGGTCTCG+TGG | + | chr8.2:15330762-15330781 | MS.gene060553:CDS | 55.0% | |
| TCGAGTCCAATCACCACCTC+TGG | - | chr8.2:15330970-15330989 | None:intergenic | 55.0% | |
| TCGCCAGATGCAGTTGACCA+AGG | + | chr8.2:15332655-15332674 | MS.gene060553:CDS | 55.0% | |
| ! | GAGAGTGACGGTGATGGTGA+TGG | + | chr8.2:15333793-15333812 | MS.gene060553:CDS | 55.0% |
| !! | AGTGACGGTGATGGTGATGG+TGG | + | chr8.2:15333796-15333815 | MS.gene060553:CDS | 55.0% |
| !! | GGTGATGGTGATGGTGGTCT+TGG | + | chr8.2:15333802-15333821 | MS.gene060553:CDS | 55.0% |
| AATGGGGTGAGGTCTCGTGG+CGG | + | chr8.2:15330765-15330784 | MS.gene060553:CDS | 60.0% | |
| ATAGGTCCCGAGACCGTGAC+AGG | + | chr8.2:15331126-15331145 | MS.gene060553:CDS | 60.0% | |
| ATAGGTCCCGCGACCGTGAT+AGG | + | chr8.2:15331015-15331034 | MS.gene060553:CDS | 60.0% | |
| CACGGTCTCGGGACCTATCA+CGG | - | chr8.2:15331124-15331143 | None:intergenic | 60.0% | |
| CAGGGTACAGGGTGGAGATG+TGG | + | chr8.2:15331640-15331659 | MS.gene060553:CDS | 60.0% | |
| CCAATCCCTGTCACGGTCTC+GGG | - | chr8.2:15331135-15331154 | None:intergenic | 60.0% | |
| CCCAATCCCTGTCACGGTCT+CGG | - | chr8.2:15331136-15331155 | None:intergenic | 60.0% | |
| CCCGAGACCGTGACAGAGAT+AGG | + | chr8.2:15331411-15331430 | MS.gene060553:CDS | 60.0% | |
| CCGAGACCGTGACAGGGATT+GGG | + | chr8.2:15331133-15331152 | MS.gene060553:CDS | 60.0% | |
| CTCGAGACCTATCACGGTCG+CGG | - | chr8.2:15331025-15331044 | None:intergenic | 60.0% | |
| GGCAGTGATTGGACCAGAGG+TGG | + | chr8.2:15330954-15330973 | MS.gene060553:CDS | 60.0% | |
| GTCCCGAGACCGTGACATCA+TGG | + | chr8.2:15331502-15331521 | MS.gene060553:CDS | 60.0% | |
| TAGGTCCCGAGACCGTGACA+GGG | + | chr8.2:15331127-15331146 | MS.gene060553:CDS | 60.0% | |
| TCGAGACCTATCACGGTCGC+GGG | - | chr8.2:15331024-15331043 | None:intergenic | 60.0% | |
| CACGGTCGCGGGACCTATCA+CGG | - | chr8.2:15331013-15331032 | None:intergenic | 65.0% | |
| CCCGAGACCGTGACAGGGAT+TGG | + | chr8.2:15331132-15331151 | MS.gene060553:CDS | 65.0% | |
| CCCTGTCACGGTCACGGTCT+CGG | - | chr8.2:15331322-15331341 | None:intergenic | 65.0% | |
| CCGAGACCGTGACCGTGACA+GGG | + | chr8.2:15331319-15331338 | MS.gene060553:CDS | 65.0% | |
| CCTGTCACGGTCACGGTCTC+GGG | - | chr8.2:15331321-15331340 | None:intergenic | 65.0% | |
| CGAGACCGTGACCGTGACAG+GGG | + | chr8.2:15331320-15331339 | MS.gene060553:CDS | 65.0% | |
| AGGTCTCGTGGCGGTGGAGG+TGG | + | chr8.2:15330774-15330793 | MS.gene060553:CDS | 70.0% | |
| CACGGTCTCGGGACCCATCG+CGG | - | chr8.2:15331496-15331515 | None:intergenic | 70.0% | |
| CCCGAGACCGTGACCGTGAC+AGG | + | chr8.2:15331318-15331337 | MS.gene060553:CDS | 70.0% | |
| GTGAGGTCTCGTGGCGGTGG+AGG | + | chr8.2:15330771-15330790 | MS.gene060553:CDS | 70.0% | |
| TCTCGTGGCGGTGGAGGTGG+CGG | + | chr8.2:15330777-15330796 | MS.gene060553:CDS | 70.0% | |
| GGGGTGAGGTCTCGTGGCGG+TGG | + | chr8.2:15330768-15330787 | MS.gene060553:CDS | 75.0% | |
| ! | GGTGGAGGTGGCGGTGGTGG+TGG | + | chr8.2:15330786-15330805 | MS.gene060553:CDS | 75.0% |
| !! | CGTGGCGGTGGAGGTGGCGG+TGG | + | chr8.2:15330780-15330799 | MS.gene060553:CDS | 80.0% |
| !! | GGCGGTGGAGGTGGCGGTGG+TGG | + | chr8.2:15330783-15330802 | MS.gene060553:CDS | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.2 | gene | 15330266 | 15333858 | 15330266 | ID=MS.gene060553 |
| chr8.2 | mRNA | 15330266 | 15333858 | 15330266 | ID=MS.gene060553.t1;Parent=MS.gene060553 |
| chr8.2 | exon | 15330266 | 15330376 | 15330266 | ID=MS.gene060553.t1.exon1;Parent=MS.gene060553.t1 |
| chr8.2 | CDS | 15330266 | 15330376 | 15330266 | ID=cds.MS.gene060553.t1;Parent=MS.gene060553.t1 |
| chr8.2 | exon | 15330516 | 15330614 | 15330516 | ID=MS.gene060553.t1.exon2;Parent=MS.gene060553.t1 |
| chr8.2 | CDS | 15330516 | 15330614 | 15330516 | ID=cds.MS.gene060553.t1;Parent=MS.gene060553.t1 |
| chr8.2 | exon | 15330738 | 15331771 | 15330738 | ID=MS.gene060553.t1.exon3;Parent=MS.gene060553.t1 |
| chr8.2 | CDS | 15330738 | 15331771 | 15330738 | ID=cds.MS.gene060553.t1;Parent=MS.gene060553.t1 |
| chr8.2 | exon | 15331875 | 15331932 | 15331875 | ID=MS.gene060553.t1.exon4;Parent=MS.gene060553.t1 |
| chr8.2 | CDS | 15331875 | 15331932 | 15331875 | ID=cds.MS.gene060553.t1;Parent=MS.gene060553.t1 |
| chr8.2 | exon | 15332081 | 15332134 | 15332081 | ID=MS.gene060553.t1.exon5;Parent=MS.gene060553.t1 |
| chr8.2 | CDS | 15332081 | 15332134 | 15332081 | ID=cds.MS.gene060553.t1;Parent=MS.gene060553.t1 |
| chr8.2 | exon | 15332425 | 15332493 | 15332425 | ID=MS.gene060553.t1.exon6;Parent=MS.gene060553.t1 |
| chr8.2 | CDS | 15332425 | 15332493 | 15332425 | ID=cds.MS.gene060553.t1;Parent=MS.gene060553.t1 |
| chr8.2 | exon | 15332611 | 15332676 | 15332611 | ID=MS.gene060553.t1.exon7;Parent=MS.gene060553.t1 |
| chr8.2 | CDS | 15332611 | 15332676 | 15332611 | ID=cds.MS.gene060553.t1;Parent=MS.gene060553.t1 |
| chr8.2 | exon | 15332761 | 15332829 | 15332761 | ID=MS.gene060553.t1.exon8;Parent=MS.gene060553.t1 |
| chr8.2 | CDS | 15332761 | 15332829 | 15332761 | ID=cds.MS.gene060553.t1;Parent=MS.gene060553.t1 |
| chr8.2 | exon | 15333769 | 15333858 | 15333769 | ID=MS.gene060553.t1.exon9;Parent=MS.gene060553.t1 |
| chr8.2 | CDS | 15333769 | 15333858 | 15333769 | ID=cds.MS.gene060553.t1;Parent=MS.gene060553.t1 |
| Gene Sequence |
| Protein sequence |
